Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:44:10 (4052799): wrapper (7.7.26015): starting
08:44:10 (4052799): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 08:44:11] Arguments: --nthreads 8
[2026-01-15 08:44:11] Threads: 8
[2026-01-15 08:44:11] Checking for CVMFS
[2026-01-15 08:44:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 08:44:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 08:44:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 08:44:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 08:44:12] 2.13.3.0 12348 102127 414252 155174 0 582 22641513 32935937 26780 16776704 0 366242146 99.490 482984126 34622 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 08:44:12] CVMFS is ok
[2026-01-15 08:44:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 08:44:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 08:44:12] Further information can be found at the LHC@home message board.
[2026-01-15 08:44:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 08:44:12] Checking for apptainer binary...
[2026-01-15 08:44:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 08:44:12] Running /usr/bin/apptainer --version
[2026-01-15 08:44:12] apptainer version 1.4.5-2.el9
[2026-01-15 08:44:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 08:44:12] c6-12-27-2.aglt2.org
[2026-01-15 08:44:12] apptainer works
[2026-01-15 08:44:12] Set ATHENA_PROC_NUMBER=8
[2026-01-15 08:44:12] Set ATHENA_CORE_NUMBER=8
[2026-01-15 08:44:12] Starting ATLAS job with PandaID=6970393375
[2026-01-15 08:44:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:06:46]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:06:46] 2026-01-15 15:05:25,015 | INFO     | time since job start (4853s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:26,556 | INFO     | monitor loop #328: job 0:6970393375 is in state 'finished'
[2026-01-15 10:06:46] 2026-01-15 15:05:26,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:06:46] 2026-01-15 15:05:26,653 | INFO     | job 6970393375 has state=finished
[2026-01-15 10:06:46] 2026-01-15 15:05:26,653 | INFO     | preparing for final server update for job 6970393375 in state='finished'
[2026-01-15 10:06:46] 2026-01-15 15:05:26,654 | INFO     | this job has now completed (state=finished)
[2026-01-15 10:06:46] 2026-01-15 15:05:26,654 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 10:06:46] 2026-01-15 15:05:26,654 | INFO     | log transfer has been attempted: DONE
[2026-01-15 10:06:46] 2026-01-15 15:05:26,654 | INFO     | job 6970393375 has finished - writing final server update
[2026-01-15 10:06:46] 2026-01-15 15:05:26,654 | INFO     | total number of processed events: 400 (read)
[2026-01-15 10:06:46] 2026-01-15 15:05:26,667 | INFO     | executing command: lscpu
[2026-01-15 10:06:46] 2026-01-15 15:05:26,788 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:06:46] 2026-01-15 15:05:27,022 | INFO     | time since job start (4855s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:27,023 | INFO     | 4857s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-15 10:06:46] 2026-01-15 15:05:29,030 | INFO     | time since job start (4857s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:29,079 | INFO     | monitor loop #329: job 0:6970393375 is in state 'finished'
[2026-01-15 10:06:46] 2026-01-15 15:05:29,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:06:46] 2026-01-15 15:05:31,036 | INFO     | time since job start (4859s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:31,636 | INFO     | monitor loop #330: job 0:6970393375 is in state 'finished'
[2026-01-15 10:06:46] 2026-01-15 15:05:31,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:06:46] 2026-01-15 15:05:33,077 | INFO     | time since job start (4861s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:34,141 | INFO     | monitor loop #331: job 0:6970393375 is in state 'finished'
[2026-01-15 10:06:46] 2026-01-15 15:05:34,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:06:46] 2026-01-15 15:05:35,089 | INFO     | time since job start (4863s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:36,646 | INFO     | monitor loop #332: job 0:6970393375 is in state 'finished'
[2026-01-15 10:06:46] 2026-01-15 15:05:36,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:06:46] 2026-01-15 15:05:37,101 | INFO     | time since job start (4865s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:39,108 | INFO     | time since job start (4867s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:39,151 | INFO     | monitor loop #333: job 0:6970393375 is in state 'finished'
[2026-01-15 10:06:46] 2026-01-15 15:05:39,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:06:46] 2026-01-15 15:05:41,115 | INFO     | time since job start (4869s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:41,671 | INFO     | monitor loop #334: job 0:6970393375 is in state 'finished'
[2026-01-15 10:06:46] 2026-01-15 15:05:41,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:06:46] 2026-01-15 15:05:42,873 | INFO     | PID=4056528 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:06:46] 2026-01-15 15:05:42,874 | INFO     | .. there are 25 such processes running
[2026-01-15 10:06:46] 2026-01-15 15:05:43,875 | INFO     | time since job start (4871s) is within the limit (349056.0s)
[2026-01-15 10:06:46] 2026-01-15 15:05:44,188 | INFO     | monitor loop #335: job 0:6970393375 is in state 'finished'
[2026-01-15 10:06:46] 2026-01-15 15:05:44,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:06:46] 2026-01-15 15:05:44,224 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 10:06:46] 2026-01-15 15:05:44,259 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2685.280302083334
[2026-01-15 10:06:46] 2026-01-15 15:05:44,351 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6970393375/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:06:46] 2026-01-15 15:05:44,352 | INFO     | extracted standard info from prmon json
[2026-01-15 10:06:46] 2026-01-15 15:05:44,352 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:06:46] 2026-01-15 15:05:44,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:06:46] 2026-01-15 15:05:44,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:06:46] 2026-01-15 15:05:44,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:06:46] 2026-01-15 15:05:44,355 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:06:46] 2026-01-15 15:05:44,355 | INFO     | sum of square deviations: 115749290.31944431
[2026-01-15 10:06:46] 2026-01-15 15:05:44,355 | INFO     | sum of deviations: -9729367313.972221
[2026-01-15 10:06:46] 2026-01-15 15:05:44,355 | INFO     | mean x: 1768487179.9027777
[2026-01-15 10:06:46] 2026-01-15 15:05:44,355 | INFO     | mean y: 2639466.861111111
[2026-01-15 10:06:46] 2026-01-15 15:05:44,356 | INFO     | intersect: 148653757031.72256
[2026-01-15 10:06:46] 2026-01-15 15:05:44,356 | INFO     | chi2: 0.058426586496941435
[2026-01-15 10:06:46] 2026-01-15 15:05:44,356 | INFO     | current memory leak: -84.06 B/s (using 72 data points, chi2=0.06)
[2026-01-15 10:06:46] 2026-01-15 15:05:44,356 | INFO     | could have reported an average CPU frequency of 2661 MHz (6 samples)
[2026-01-15 10:06:46] 2026-01-15 15:05:44,356 | INFO     | ..............................
[2026-01-15 10:06:46] 2026-01-15 15:05:44,357 | INFO     | . Timing measurements:
[2026-01-15 10:06:46] 2026-01-15 15:05:44,357 | INFO     | . get job = 0 s
[2026-01-15 10:06:46] 2026-01-15 15:05:44,357 | INFO     | . initial setup = 2 s
[2026-01-15 10:06:46] 2026-01-15 15:05:44,357 | INFO     | . payload setup = 9 s
[2026-01-15 10:06:46] 2026-01-15 15:05:44,357 | INFO     | . stage-in = 0 s
[2026-01-15 10:06:46] 2026-01-15 15:05:44,357 | INFO     | . payload execution = 4814 s
[2026-01-15 10:06:46] 2026-01-15 15:05:44,357 | INFO     | . stage-out = 1 s
[2026-01-15 10:06:46] 2026-01-15 15:05:44,357 | INFO     | . log creation = 0 s
[2026-01-15 10:06:46] 2026-01-15 15:05:44,357 | INFO     | ..............................
[2026-01-15 10:06:46] 2026-01-15 15:05:44,478 | INFO     | 
[2026-01-15 10:06:46] 2026-01-15 15:05:44,478 | INFO     | job summary report
[2026-01-15 10:06:46] 2026-01-15 15:05:44,478 | INFO     | --------------------------------------------------
[2026-01-15 10:06:46] 2026-01-15 15:05:44,478 | INFO     | PanDA job id: 6970393375
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | task id: 48215263
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | errors: (none)
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | pilot state: finished 
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | transexitcode: 0
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | exeerrorcode: 0
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | exeerrordiag: 
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | exitcode: 0
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | exitmsg: OK
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | cpuconsumptiontime: 28386 s
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | nevents: 400
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | neventsw: 0
[2026-01-15 10:06:46] 2026-01-15 15:05:44,479 | INFO     | pid: 4063654
[2026-01-15 10:06:46] 2026-01-15 15:05:44,480 | INFO     | pgrp: 4063654
[2026-01-15 10:06:46] 2026-01-15 15:05:44,480 | INFO     | corecount: 8
[2026-01-15 10:06:46] 2026-01-15 15:05:44,480 | INFO     | event service: False
[2026-01-15 10:06:46] 2026-01-15 15:05:44,480 | INFO     | sizes: {0: 2283674, 1: 2283929, 2: 2283929, 10: 2284219, 12: 2284247, 4828: 2310519, 4829: 2310646, 4831: 2319700, 4832: 2319756, 4852: 2319950}
[2026-01-15 10:06:46] 2026-01-15 15:05:44,480 | INFO     | --------------------------------------------------
[2026-01-15 10:06:46] 2026-01-15 15:05:44,480 | INFO     | 
[2026-01-15 10:06:46] 2026-01-15 15:05:44,480 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-15 10:06:46] 2026-01-15 15:05:44,532 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,532 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,534 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:06:46] 2026-01-15 15:05:44,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,534 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:06:46] 2026-01-15 15:05:44,534 | INFO     | job 6970393375 has completed (purged errors)
[2026-01-15 10:06:46] 2026-01-15 15:05:44,534 | INFO     | overall cleanup function is called
[2026-01-15 10:06:46] 2026-01-15 15:05:45,560 | INFO     | --- collectZombieJob: --- 10, [4063654]
[2026-01-15 10:06:46] 2026-01-15 15:05:45,560 | INFO     | zombie collector waiting for pid 4063654
[2026-01-15 10:06:46] 2026-01-15 15:05:45,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:06:46] 2026-01-15 15:05:45,560 | INFO     | collected zombie processes
[2026-01-15 10:06:46] 2026-01-15 15:05:45,560 | INFO     | will attempt to kill all subprocesses of pid=4063654
[2026-01-15 10:06:46] 2026-01-15 15:05:46,404 | INFO     | process IDs to be killed: [4063654] (in reverse order)
[2026-01-15 10:06:46] 2026-01-15 15:05:46,723 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:06:46] 2026-01-15 15:05:46,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:06:46] 2026-01-15 15:05:46,767 | INFO     | did not find any defunct processes belonging to 4063654
[2026-01-15 10:06:46] 2026-01-15 15:05:46,785 | INFO     | did not find any defunct processes belonging to 4063654
[2026-01-15 10:06:46] 2026-01-15 15:05:46,785 | INFO     | ready for new job
[2026-01-15 10:06:46] 2026-01-15 15:05:46,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:06:46] 2026-01-15 15:05:46,787 | INFO     | ***************************************
[2026-01-15 10:06:46] 2026-01-15 15:05:46,787 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:06:46] 2026-01-15 15:05:46,787 | INFO     | ***************************************
[2026-01-15 10:06:46] 2026-01-15 15:05:46,787 | INFO     | 
[2026-01-15 10:06:46] 2026-01-15 15:05:46,793 | INFO     | architecture information:
[2026-01-15 10:06:46] 2026-01-15 15:05:46,793 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:06:46] 2026-01-15 15:05:46,814 | INFO     | cat /etc/os-release:
[2026-01-15 10:06:46] NAME="CentOS Linux"
[2026-01-15 10:06:46] VERSION="7 (Core)"
[2026-01-15 10:06:46] ID="centos"
[2026-01-15 10:06:46] ID_LIKE="rhel fedora"
[2026-01-15 10:06:46] VERSION_ID="7"
[2026-01-15 10:06:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:06:46] ANSI_COLOR="0;31"
[2026-01-15 10:06:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:06:46] HOME_URL="https://www.centos.org/"
[2026-01-15 10:06:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:06:46] 
[2026-01-15 10:06:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:06:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:06:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:06:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:06:46] 
[2026-01-15 10:06:46] 2026-01-15 15:05:46,814 | INFO     | ***************************************
[2026-01-15 10:06:46] 2026-01-15 15:05:47,318 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-15 10:06:46] 2026-01-15 15:05:47,520 | INFO     | sufficient remaining disk space (90084212736 B)
[2026-01-15 10:06:46] 2026-01-15 15:05:47,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:06:46] 2026-01-15 15:05:47,521 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:06:46] 2026-01-15 15:05:47,521 | INFO     | update_server=False
[2026-01-15 10:06:46] 2026-01-15 15:05:47,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:06:46] 2026-01-15 15:05:47,529 | INFO     | all data control threads have been joined
[2026-01-15 10:06:46] 2026-01-15 15:05:47,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:06:46] 2026-01-15 15:05:47,727 | INFO     | aborting loop
[2026-01-15 10:06:46] 2026-01-15 15:05:48,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:06:46] 2026-01-15 15:05:48,481 | INFO     | all job control threads have been joined
[2026-01-15 10:06:46] 2026-01-15 15:05:48,527 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:48,535 | INFO     | [data] control thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:48,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:06:46] 2026-01-15 15:05:48,683 | INFO     | all payload control threads have been joined
[2026-01-15 10:06:46] 2026-01-15 15:05:48,733 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,128 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,165 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,260 | INFO     | [job] validate thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,287 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,460 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,487 | INFO     | [job] control thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:06:46] 2026-01-15 15:05:49,582 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,689 | INFO     | [payload] control thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,711 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:49,974 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:50,503 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:50,570 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:05:52,426 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:06:46] 2026-01-15 15:06:17,841 | INFO     | PID=4056528 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:06:46] 2026-01-15 15:06:17,841 | INFO     | .. there are 25 such processes running
[2026-01-15 10:06:46] 2026-01-15 15:06:17,842 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:06:46] 2026-01-15 15:06:17,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:06:46] 2026-01-15 15:06:17,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:06:46] 2026-01-15 15:06:39,954 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:06:46] 2026-01-15 15:06:40,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140112081782592)>', '<ExcThread(monitor, started 140111605909248)>']
[2026-01-15 10:06:46] 2026-01-15 15:06:40,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:06:46] 2026-01-15 15:06:40,995 | INFO     | [monitor] control thread has ended
[2026-01-15 10:06:46] 2026-01-15 15:06:45,228 | INFO     | all workflow threads have been joined
[2026-01-15 10:06:46] 2026-01-15 15:06:45,228 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:06:46] 2026-01-15 15:06:45,228 | INFO     | traces error code: 0
[2026-01-15 10:06:46] 2026-01-15 15:06:45,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:06:46] 2026-01-15 15:06:45,582 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:06:46] 2026-01-15 15:06:45,584 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:06:46] 2026-01-15 15:06:45,587 [wrapper] pilotpid: 4056528
[2026-01-15 10:06:46] 2026-01-15 15:06:45,589 [wrapper] Pilot exit status: 0
[2026-01-15 10:06:46] 2026-01-15 15:06:45,614 [wrapper] pandaids: 6970393375
[2026-01-15 10:06:46] 2026-01-15 15:06:45,708 [wrapper] cleanup supervisor_pilot  176563 4056529
[2026-01-15 10:06:46] 2026-01-15 15:06:45,711 [wrapper] Test setup, not cleaning
[2026-01-15 10:06:46] 2026-01-15 15:06:45,758 [wrapper] apfmon messages muted
[2026-01-15 10:06:46] 2026-01-15 15:06:45,761 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:06:46] 2026-01-15 15:06:45,764 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:06:46]  *** Error codes and diagnostics ***
[2026-01-15 10:06:46]     "exeErrorCode": 0,
[2026-01-15 10:06:46]     "exeErrorDiag": "",
[2026-01-15 10:06:46]     "pilotErrorCode": 0,
[2026-01-15 10:06:46]     "pilotErrorDiag": "",
[2026-01-15 10:06:46]  *** Listing of results directory ***
[2026-01-15 10:06:46] total 744112
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 23:50 pilot3.tar.gz
[2026-01-15 10:06:46] -rwx------. 1 boincer umatlas     36322 Jan 14 23:52 runpilot2-wrapper.sh
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 23:54 queuedata.json
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas       100 Jan 15 08:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:06:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 08:44 run_atlas
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas       105 Jan 15 08:44 job.xml
[2026-01-15 10:06:46] -rw-r--r--. 2 boincer umatlas 599793592 Jan 15 08:44 EVNT.32794306._001679.pool.root.1
[2026-01-15 10:06:46] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 08:44 start_atlas.sh
[2026-01-15 10:06:46] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 08:44 shared
[2026-01-15 10:06:46] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 08:44 input.tar.gz
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas         0 Jan 15 08:44 boinc_lockfile
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 08:44 pandaJob.out
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas        57 Jan 15 08:44 setup.sh.local
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas   1004248 Jan 15 08:44 agis_schedconf.cvmfs.json
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas   1516246 Jan 15 08:44 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:06:46] drwx------. 5 boincer umatlas      4096 Jan 15 08:44 pilot3
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas      6877 Jan 15 10:00 init_data.xml
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas 156215883 Jan 15 10:04 HITS.48215263._046686.pool.root.1
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas       530 Jan 15 10:04 boinc_task_state.xml
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas      1040 Jan 15 10:05 memory_monitor_summary.json
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas    319226 Jan 15 10:05 log.48215263._046686.job.log.tgz.1
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas      7824 Jan 15 10:05 heartbeat.json
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas        95 Jan 15 10:06 pilot_heartbeat.json
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas      4824 Jan 15 10:06 pilotlog.txt
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas        27 Jan 15 10:06 wrapper_checkpoint.txt
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas    692293 Jan 15 10:06 log.48215263._046686.job.log.1
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 10:06 boinc_mmap_file
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas       357 Jan 15 10:06 output.list
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas       620 Jan 15 10:06 runtime_log
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas   1034240 Jan 15 10:06 result.tar.gz
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas       654 Jan 15 10:06 V0DLDmMWU08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBCuKDmacRkon.diag
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas      9352 Jan 15 10:06 runtime_log.err
[2026-01-15 10:06:46] -rw-r--r--. 1 boincer umatlas     22400 Jan 15 10:06 stderr.txt
[2026-01-15 10:06:46] HITS file was successfully produced:
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas 156215883 Jan 15 10:04 shared/HITS.pool.root.1
[2026-01-15 10:06:46]  *** Contents of shared directory: ***
[2026-01-15 10:06:46] total 739908
[2026-01-15 10:06:46] -rw-r--r--. 2 boincer umatlas 599793592 Jan 15 08:44 ATLAS.root_0
[2026-01-15 10:06:46] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 08:44 start_atlas.sh
[2026-01-15 10:06:46] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 08:44 input.tar.gz
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas 156215883 Jan 15 10:04 HITS.pool.root.1
[2026-01-15 10:06:46] -rw-------. 1 boincer umatlas   1034240 Jan 15 10:06 result.tar.gz
10:07:07 (4052799): run_atlas exited; CPU time 28584.542223
10:07:07 (4052799): called boinc_finish(0)

</stderr_txt>
]]>

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