Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:24:44 (629738): wrapper (7.7.26015): starting
13:24:44 (629738): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 13:24:44] Arguments: --nthreads 4
[2026-01-15 13:24:44] Threads: 4
[2026-01-15 13:24:44] Checking for CVMFS
[2026-01-15 13:24:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 13:24:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 13:24:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 13:24:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 13:24:44] 2.13.3.0 3426809 2039 51828 155181 3 188 3616546 6144000 6454 130560 0 13362152 99.998 80640 952 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-15 13:24:44] CVMFS is ok
[2026-01-15 13:24:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 13:24:44] Checking for apptainer binary...
[2026-01-15 13:24:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 13:24:44] Running /usr/bin/apptainer --version
[2026-01-15 13:24:44] apptainer version 1.4.5
[2026-01-15 13:24:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 13:24:44] Starfish-Cruncher
[2026-01-15 13:24:44] apptainer works
[2026-01-15 13:24:44] Set ATHENA_PROC_NUMBER=4
[2026-01-15 13:24:44] Set ATHENA_CORE_NUMBER=4
[2026-01-15 13:24:44] Starting ATLAS job with PandaID=6970287050
[2026-01-15 13:24:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 14:48:08]  *** The last 200 lines of the pilot log: ***
[2026-01-15 14:48:08]  is_altstaged=None
[2026-01-15 14:48:08]  is_tar=False
[2026-01-15 14:48:08]  lfn=log.48215263._044194.job.log.tgz.1
[2026-01-15 14:48:08]  mtime=0
[2026-01-15 14:48:08]  protocol_id=None
[2026-01-15 14:48:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 14:48:08]  replicas=None
[2026-01-15 14:48:08]  scope=mc23_13p6TeV
[2026-01-15 14:48:08]  status=None
[2026-01-15 14:48:08]  status_code=0
[2026-01-15 14:48:08]  storage_token=
[2026-01-15 14:48:08]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6970287050/log.48215263._044194.job.log.tgz.1
[2026-01-15 14:48:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/6f/log.48215263._044194.job.log.tgz.1
[2026-01-15 14:48:08]  workdir=None
[2026-01-15 14:48:08] ]
[2026-01-15 14:48:08] 2026-01-15 20:47:10,707 | INFO     | transferring file log.48215263._044194.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6970287050/log.48215263._044194.job.log.tgz.1 to /var/lib/boinc
[2026-01-15 14:48:08] 2026-01-15 20:47:10,707 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6970287050/log.48215263._044194.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.482152
[2026-01-15 14:48:08] 2026-01-15 20:47:10,723 | INFO     | adding to output.list: log.48215263._044194.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/6f/log.48215263._044194.job.log.tg
[2026-01-15 14:48:08] 2026-01-15 20:47:10,724 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 14:48:08] 2026-01-15 20:47:10,724 | INFO     | summary of transferred files:
[2026-01-15 14:48:08] 2026-01-15 20:47:10,724 | INFO     |  -- lfn=log.48215263._044194.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 14:48:08] 2026-01-15 20:47:10,724 | INFO     | stage-out finished correctly
[2026-01-15 14:48:08] 2026-01-15 20:47:10,956 | INFO     | time since job start (4936s) is within the limit (349056.0s)
[2026-01-15 14:48:08] 2026-01-15 20:47:11,462 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 14:48:08] 2026-01-15 20:47:11,644 | INFO     | job 6970287050 has state=finished
[2026-01-15 14:48:08] 2026-01-15 20:47:11,645 | INFO     | preparing for final server update for job 6970287050 in state='finished'
[2026-01-15 14:48:08] 2026-01-15 20:47:11,645 | INFO     | this job has now completed (state=finished)
[2026-01-15 14:48:08] 2026-01-15 20:47:11,645 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 14:48:08] 2026-01-15 20:47:11,645 | INFO     | log transfer has been attempted: DONE
[2026-01-15 14:48:08] 2026-01-15 20:47:11,645 | INFO     | job 6970287050 has finished - writing final server update
[2026-01-15 14:48:08] 2026-01-15 20:47:11,645 | INFO     | total number of processed events: 400 (read)
[2026-01-15 14:48:08] 2026-01-15 20:47:11,648 | INFO     | executing command: lscpu
[2026-01-15 14:48:08] 2026-01-15 20:47:11,676 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 14:48:08] 2026-01-15 20:47:12,961 | INFO     | time since job start (4938s) is within the limit (349056.0s)
[2026-01-15 14:48:08] 2026-01-15 20:47:13,877 | WARNING  | process 640456 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 14:48:08] 2026-01-15 20:47:13,878 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6970287050/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 14:48:08] 2026-01-15 20:47:14,053 | INFO     | number of running child processes to parent process 640456: 1
[2026-01-15 14:48:08] 2026-01-15 20:47:14,053 | INFO     | maximum number of monitored processes: 6
[2026-01-15 14:48:08] 2026-01-15 20:47:14,768 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 14:48:08] 2026-01-15 20:47:14,771 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3575.9110937499995
[2026-01-15 14:48:08] 2026-01-15 20:47:14,775 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6970287050/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 14:48:08] 2026-01-15 20:47:14,776 | INFO     | extracted standard info from prmon json
[2026-01-15 14:48:08] 2026-01-15 20:47:14,776 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 14:48:08] 2026-01-15 20:47:14,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 14:48:08] 2026-01-15 20:47:14,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 14:48:08] 2026-01-15 20:47:14,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 14:48:08] 2026-01-15 20:47:14,777 | INFO     | fitting pss+swap vs Time
[2026-01-15 14:48:08] 2026-01-15 20:47:14,777 | INFO     | sum of square deviations: 125630262.5
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | sum of deviations: -550220091.5000001
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | mean x: 1768507647.5
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | mean y: 2339626.1756756757
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | intersect: 7747833588.07757
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | chi2: 0.003339478642076189
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | current memory leak: -4.38 B/s (using 74 data points, chi2=0.00)
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | could have reported an average CPU frequency of 3604 MHz (6 samples)
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | ..............................
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | . Timing measurements:
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | . get job = 0 s
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | . initial setup = 3 s
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | . payload setup = 3 s
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | . stage-in = 0 s
[2026-01-15 14:48:08] 2026-01-15 20:47:14,778 | INFO     | . payload execution = 4913 s
[2026-01-15 14:48:08] 2026-01-15 20:47:14,779 | INFO     | . stage-out = 0 s
[2026-01-15 14:48:08] 2026-01-15 20:47:14,779 | INFO     | . log creation = 0 s
[2026-01-15 14:48:08] 2026-01-15 20:47:14,779 | INFO     | ..............................
[2026-01-15 14:48:08] 2026-01-15 20:47:14,845 | INFO     | 
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | job summary report
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | --------------------------------------------------
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | PanDA job id: 6970287050
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | task id: 48215263
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | errors: (none)
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | pilot state: finished 
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | transexitcode: 0
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | exeerrorcode: 0
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | exeerrordiag: 
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | exitcode: 0
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | exitmsg: OK
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | cpuconsumptiontime: 18525 s
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | nevents: 400
[2026-01-15 14:48:08] 2026-01-15 20:47:14,846 | INFO     | neventsw: 0
[2026-01-15 14:48:08] 2026-01-15 20:47:14,847 | INFO     | pid: 640456
[2026-01-15 14:48:08] 2026-01-15 20:47:14,847 | INFO     | pgrp: 640456
[2026-01-15 14:48:08] 2026-01-15 20:47:14,847 | INFO     | corecount: 4
[2026-01-15 14:48:08] 2026-01-15 20:47:14,847 | INFO     | event service: False
[2026-01-15 14:48:08] 2026-01-15 20:47:14,847 | INFO     | sizes: {0: 2283736, 1: 2283935, 4: 2284197, 11: 2284225, 4921: 2310583, 4922: 2319595, 4923: 2319779, 4927: 2319973}
[2026-01-15 14:48:08] 2026-01-15 20:47:14,847 | INFO     | --------------------------------------------------
[2026-01-15 14:48:08] 2026-01-15 20:47:14,847 | INFO     | 
[2026-01-15 14:48:08] 2026-01-15 20:47:14,847 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2026-01-15 14:48:08] 2026-01-15 20:47:14,863 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,863 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,863 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,863 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,864 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 14:48:08] 2026-01-15 20:47:14,865 | INFO     | job 6970287050 has completed (purged errors)
[2026-01-15 14:48:08] 2026-01-15 20:47:14,865 | INFO     | overall cleanup function is called
[2026-01-15 14:48:08] 2026-01-15 20:47:15,872 | INFO     | --- collectZombieJob: --- 10, [640456]
[2026-01-15 14:48:08] 2026-01-15 20:47:15,872 | INFO     | zombie collector waiting for pid 640456
[2026-01-15 14:48:08] 2026-01-15 20:47:15,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 14:48:08] 2026-01-15 20:47:15,872 | INFO     | collected zombie processes
[2026-01-15 14:48:08] 2026-01-15 20:47:15,872 | INFO     | will attempt to kill all subprocesses of pid=640456
[2026-01-15 14:48:08] 2026-01-15 20:47:16,044 | INFO     | process IDs to be killed: [640456] (in reverse order)
[2026-01-15 14:48:08] 2026-01-15 20:47:16,105 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 14:48:08] 2026-01-15 20:47:16,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 14:48:08] 2026-01-15 20:47:16,110 | INFO     | did not find any defunct processes belonging to 640456
[2026-01-15 14:48:08] 2026-01-15 20:47:16,114 | INFO     | did not find any defunct processes belonging to 640456
[2026-01-15 14:48:08] 2026-01-15 20:47:16,114 | INFO     | ready for new job
[2026-01-15 14:48:08] 2026-01-15 20:47:16,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 14:48:08] 2026-01-15 20:47:16,116 | INFO     | ***************************************
[2026-01-15 14:48:08] 2026-01-15 20:47:16,116 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 14:48:08] 2026-01-15 20:47:16,116 | INFO     | ***************************************
[2026-01-15 14:48:08] 2026-01-15 20:47:16,116 | INFO     | 
[2026-01-15 14:48:08] 2026-01-15 20:47:16,117 | INFO     | architecture information:
[2026-01-15 14:48:08] 2026-01-15 20:47:16,117 | INFO     | executing command: cat /etc/os-release
[2026-01-15 14:48:08] 2026-01-15 20:47:16,131 | INFO     | cat /etc/os-release:
[2026-01-15 14:48:08] NAME="CentOS Linux"
[2026-01-15 14:48:08] VERSION="7 (Core)"
[2026-01-15 14:48:08] ID="centos"
[2026-01-15 14:48:08] ID_LIKE="rhel fedora"
[2026-01-15 14:48:08] VERSION_ID="7"
[2026-01-15 14:48:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 14:48:08] ANSI_COLOR="0;31"
[2026-01-15 14:48:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 14:48:08] HOME_URL="https://www.centos.org/"
[2026-01-15 14:48:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 14:48:08] 
[2026-01-15 14:48:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 14:48:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 14:48:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 14:48:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 14:48:08] 
[2026-01-15 14:48:08] 2026-01-15 20:47:16,131 | INFO     | ***************************************
[2026-01-15 14:48:08] 2026-01-15 20:47:16,634 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2026-01-15 14:48:08] 2026-01-15 20:47:16,648 | INFO     | sufficient remaining disk space (1806494072832 B)
[2026-01-15 14:48:08] 2026-01-15 20:47:16,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 14:48:08] 2026-01-15 20:47:16,648 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 14:48:08] 2026-01-15 20:47:16,648 | INFO     | update_server=False
[2026-01-15 14:48:08] 2026-01-15 20:47:16,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 14:48:08] 2026-01-15 20:47:16,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:48:08] 2026-01-15 20:47:16,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 14:48:08] 2026-01-15 20:47:16,716 | INFO     | all job control threads have been joined
[2026-01-15 14:48:08] 2026-01-15 20:47:16,830 | INFO     | all payload control threads have been joined
[2026-01-15 14:48:08] 2026-01-15 20:47:17,030 | INFO     | all data control threads have been joined
[2026-01-15 14:48:08] 2026-01-15 20:47:17,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 14:48:08] 2026-01-15 20:47:17,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:48:08] 2026-01-15 20:47:17,562 | INFO     | aborting loop
[2026-01-15 14:48:08] 2026-01-15 20:47:17,653 | INFO     | [job] queue monitor thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:17,653 | INFO     | [job] retrieve thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:17,673 | INFO     | [payload] failed_post thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:17,719 | INFO     | [job] control thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:17,832 | INFO     | [payload] control thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,035 | INFO     | [data] control thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,101 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,186 | INFO     | [job] validate thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,441 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,486 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,522 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,567 | INFO     | [job] job monitor thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,656 | INFO     | [data] copytool_out thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,676 | INFO     | [payload] validate_post thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:18,872 | INFO     | [data] copytool_in thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:21,541 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 14:48:08] 2026-01-15 20:47:46,238 | INFO     | PID=633627 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 14:48:08] 2026-01-15 20:47:46,238 | INFO     | .. there are 8 such processes running
[2026-01-15 14:48:08] 2026-01-15 20:47:46,239 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 14:48:08] 2026-01-15 20:47:46,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 14:48:08] 2026-01-15 20:47:46,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 14:48:08] 2026-01-15 20:48:02,038 | INFO     | [monitor] cgroup control has ended
[2026-01-15 14:48:08] 2026-01-15 20:48:03,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136186654201664)>', '<ExcThread(monitor, started 136185997408000)>']
[2026-01-15 14:48:08] 2026-01-15 20:48:03,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 14:48:08] 2026-01-15 20:48:03,324 | INFO     | [monitor] control thread has ended
[2026-01-15 14:48:08] 2026-01-15 20:48:08,199 | INFO     | all workflow threads have been joined
[2026-01-15 14:48:08] 2026-01-15 20:48:08,199 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 14:48:08] 2026-01-15 20:48:08,199 | INFO     | traces error code: 0
[2026-01-15 14:48:08] 2026-01-15 20:48:08,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 14:48:08] 2026-01-15 20:48:08,289 [wrapper] ==== pilot stdout END ====
[2026-01-15 14:48:08] 2026-01-15 20:48:08,291 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 14:48:08] 2026-01-15 20:48:08,293 [wrapper] pilotpid: 633627
[2026-01-15 14:48:08] 2026-01-15 20:48:08,295 [wrapper] Pilot exit status: 0
[2026-01-15 14:48:08] 2026-01-15 20:48:08,303 [wrapper] pandaids: 6970287050
[2026-01-15 14:48:08] 2026-01-15 20:48:08,344 [wrapper] cleanup supervisor_pilot  836940 633628
[2026-01-15 14:48:08] 2026-01-15 20:48:08,347 [wrapper] Test setup, not cleaning
[2026-01-15 14:48:08] 2026-01-15 20:48:08,349 [wrapper] apfmon messages muted
[2026-01-15 14:48:08] 2026-01-15 20:48:08,351 [wrapper] ==== wrapper stdout END ====
[2026-01-15 14:48:08] 2026-01-15 20:48:08,353 [wrapper] ==== wrapper stderr END ====
[2026-01-15 14:48:08]  *** Error codes and diagnostics ***
[2026-01-15 14:48:08]     "exeErrorCode": 0,
[2026-01-15 14:48:08]     "exeErrorDiag": "",
[2026-01-15 14:48:08]     "pilotErrorCode": 0,
[2026-01-15 14:48:08]     "pilotErrorDiag": "",
[2026-01-15 14:48:08]  *** Listing of results directory ***
[2026-01-15 14:48:08] total 741664
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc    579449 Jan 14 21:00 pilot3.tar.gz
[2026-01-15 14:48:08] -rwx------ 1 boinc boinc     36322 Jan 14 21:04 runpilot2-wrapper.sh
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc      5112 Jan 14 21:10 queuedata.json
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc       100 Jan 15 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 14:48:08] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 13:24 run_atlas
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc       105 Jan 15 13:24 job.xml
[2026-01-15 14:48:08] -rw-r--r-- 2 boinc boinc 601868561 Jan 15 13:24 EVNT.32794306._000966.pool.root.1
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc      9664 Jan 15 13:24 init_data.xml
[2026-01-15 14:48:08] -rw-r--r-- 2 boinc boinc     15847 Jan 15 13:24 start_atlas.sh
[2026-01-15 14:48:08] drwxrwx--x 2 boinc boinc      4096 Jan 15 13:24 shared
[2026-01-15 14:48:08] -rw-r--r-- 2 boinc boinc    592417 Jan 15 13:24 input.tar.gz
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc         0 Jan 15 13:24 boinc_lockfile
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc      2508 Jan 15 13:24 pandaJob.out
[2026-01-15 14:48:08] -rw------- 1 boinc boinc   1004083 Jan 15 13:24 agis_schedconf.cvmfs.json
[2026-01-15 14:48:08] -rw------- 1 boinc boinc   1516246 Jan 15 13:24 agis_ddmendpoints.agis.ALL.json
[2026-01-15 14:48:08] drwx------ 5 boinc boinc      4096 Jan 15 13:24 pilot3
[2026-01-15 14:48:08] -rw------- 1 boinc boinc 151671577 Jan 15 14:46 HITS.48215263._044194.pool.root.1
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc       530 Jan 15 14:46 boinc_task_state.xml
[2026-01-15 14:48:08] -rw------- 1 boinc boinc        95 Jan 15 14:47 pilot_heartbeat.json
[2026-01-15 14:48:08] -rw------- 1 boinc boinc      1021 Jan 15 14:47 memory_monitor_summary.json
[2026-01-15 14:48:08] -rw------- 1 boinc boinc    257799 Jan 15 14:47 log.48215263._044194.job.log.tgz.1
[2026-01-15 14:48:08] -rw------- 1 boinc boinc      7748 Jan 15 14:47 heartbeat.json
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc        27 Jan 15 14:47 wrapper_checkpoint.txt
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc      8192 Jan 15 14:47 boinc_mmap_file
[2026-01-15 14:48:08] -rw------- 1 boinc boinc      4831 Jan 15 14:48 pilotlog.txt
[2026-01-15 14:48:08] -rw------- 1 boinc boinc    733594 Jan 15 14:48 log.48215263._044194.job.log.1
[2026-01-15 14:48:08] -rw------- 1 boinc boinc       357 Jan 15 14:48 output.list
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc       620 Jan 15 14:48 runtime_log
[2026-01-15 14:48:08] -rw------- 1 boinc boinc   1013760 Jan 15 14:48 result.tar.gz
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc      8933 Jan 15 14:48 runtime_log.err
[2026-01-15 14:48:08] -rw------- 1 boinc boinc       652 Jan 15 14:48 QLqNDmypS08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpxtKDmH8VS1m.diag
[2026-01-15 14:48:08] -rw-r--r-- 1 boinc boinc     21265 Jan 15 14:48 stderr.txt
[2026-01-15 14:48:08] HITS file was successfully produced:
[2026-01-15 14:48:08] -rw------- 1 boinc boinc 151671577 Jan 15 14:46 shared/HITS.pool.root.1
[2026-01-15 14:48:08]  *** Contents of shared directory: ***
[2026-01-15 14:48:08] total 737480
[2026-01-15 14:48:08] -rw-r--r-- 2 boinc boinc 601868561 Jan 15 13:24 ATLAS.root_0
[2026-01-15 14:48:08] -rw-r--r-- 2 boinc boinc     15847 Jan 15 13:24 start_atlas.sh
[2026-01-15 14:48:08] -rw-r--r-- 2 boinc boinc    592417 Jan 15 13:24 input.tar.gz
[2026-01-15 14:48:08] -rw------- 1 boinc boinc 151671577 Jan 15 14:46 HITS.pool.root.1
[2026-01-15 14:48:08] -rw------- 1 boinc boinc   1013760 Jan 15 14:48 result.tar.gz
14:48:10 (629738): run_atlas exited; CPU time 18592.291532
14:48:10 (629738): called boinc_finish(0)

</stderr_txt>
]]>

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