Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:38:55 (12514): wrapper (7.7.26015): starting
07:38:55 (12514): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 07:38:55] Arguments: --nthreads 12
[2026-01-15 07:38:55] Threads: 12
[2026-01-15 07:38:55] Checking for CVMFS
[2026-01-15 07:38:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 07:38:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 07:38:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 07:38:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 07:38:55] 2.11.2.0 2913 359692 97312 155172 2 56 18825917 20275200 1 130560 1 153523794 99.948 21866676 16005 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 07:38:55] CVMFS is ok
[2026-01-15 07:38:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 07:38:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 07:38:55] Further information can be found at the LHC@home message board.
[2026-01-15 07:38:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 07:38:55] Checking for apptainer binary...
[2026-01-15 07:38:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 07:38:55] Running /usr/bin/apptainer --version
[2026-01-15 07:38:55] apptainer version 1.3.2-1.el7
[2026-01-15 07:38:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 07:38:56] c-205-6.aglt2.org
[2026-01-15 07:38:56] apptainer works
[2026-01-15 07:38:57] Set ATHENA_PROC_NUMBER=12
[2026-01-15 07:38:57] Set ATHENA_CORE_NUMBER=12
[2026-01-15 07:38:57] Starting ATLAS job with PandaID=6970459417
[2026-01-15 07:38:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 08:25:21]  *** The last 200 lines of the pilot log: ***
[2026-01-15 08:25:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 08:25:21]  replicas=None
[2026-01-15 08:25:21]  scope=mc23_13p6TeV
[2026-01-15 08:25:21]  status=None
[2026-01-15 08:25:21]  status_code=0
[2026-01-15 08:25:21]  storage_token=
[2026-01-15 08:25:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6970459417/log.48215263._049874.job.log.tgz.1
[2026-01-15 08:25:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/c0/log.48215263._049874.job.log.tgz.1
[2026-01-15 08:25:21]  workdir=None
[2026-01-15 08:25:21] ]
[2026-01-15 08:25:21] 2026-01-15 13:24:25,743 | INFO     | transferring file log.48215263._049874.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6970459417/log.48215263._049874.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 08:25:21] 2026-01-15 13:24:25,743 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6970459417/log.48215263._049874.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._049874.job
[2026-01-15 08:25:21] 2026-01-15 13:24:25,764 | INFO     | adding to output.list: log.48215263._049874.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/c0/log.48215263._049874.job.log.tg
[2026-01-15 08:25:21] 2026-01-15 13:24:25,765 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 08:25:21] 2026-01-15 13:24:25,765 | INFO     | summary of transferred files:
[2026-01-15 08:25:21] 2026-01-15 13:24:25,766 | INFO     |  -- lfn=log.48215263._049874.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 08:25:21] 2026-01-15 13:24:25,766 | INFO     | stage-out finished correctly
[2026-01-15 08:25:21] 2026-01-15 13:24:26,575 | INFO     | time since job start (2715s) is within the limit (349056.0s)
[2026-01-15 08:25:21] 2026-01-15 13:24:26,794 | INFO     | monitor loop #205: job 0:6970459417 is in state 'finished'
[2026-01-15 08:25:21] 2026-01-15 13:24:26,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:25:21] 2026-01-15 13:24:28,581 | INFO     | time since job start (2717s) is within the limit (349056.0s)
[2026-01-15 08:25:21] 2026-01-15 13:24:28,643 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 08:25:21] 2026-01-15 13:24:29,093 | INFO     | job 6970459417 has state=finished
[2026-01-15 08:25:21] 2026-01-15 13:24:29,094 | INFO     | preparing for final server update for job 6970459417 in state='finished'
[2026-01-15 08:25:21] 2026-01-15 13:24:29,094 | INFO     | this job has now completed (state=finished)
[2026-01-15 08:25:21] 2026-01-15 13:24:29,094 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 08:25:21] 2026-01-15 13:24:29,095 | INFO     | log transfer has been attempted: DONE
[2026-01-15 08:25:21] 2026-01-15 13:24:29,095 | INFO     | job 6970459417 has finished - writing final server update
[2026-01-15 08:25:21] 2026-01-15 13:24:29,095 | INFO     | total number of processed events: 400 (read)
[2026-01-15 08:25:21] 2026-01-15 13:24:29,096 | INFO     | executing command: lscpu
[2026-01-15 08:25:21] 2026-01-15 13:24:29,130 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 08:25:21] 2026-01-15 13:24:29,298 | INFO     | monitor loop #206: job 0:6970459417 is in state 'finished'
[2026-01-15 08:25:21] 2026-01-15 13:24:29,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:25:21] 2026-01-15 13:24:30,586 | INFO     | time since job start (2719s) is within the limit (349056.0s)
[2026-01-15 08:25:21] 2026-01-15 13:24:31,707 | INFO     | PID=16238 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 08:25:21] 2026-01-15 13:24:31,801 | INFO     | monitor loop #207: job 0:6970459417 is in state 'finished'
[2026-01-15 08:25:21] 2026-01-15 13:24:31,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:25:21] 2026-01-15 13:24:32,707 | INFO     | time since job start (2721s) is within the limit (349056.0s)
[2026-01-15 08:25:21] 2026-01-15 13:24:33,755 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 08:25:21] 2026-01-15 13:24:33,759 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2026-01-15 08:25:21] 2026-01-15 13:24:33,760 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970459417/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 08:25:21] 2026-01-15 13:24:33,761 | INFO     | extracted standard info from prmon json
[2026-01-15 08:25:21] 2026-01-15 13:24:33,761 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 08:25:21] 2026-01-15 13:24:33,761 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 08:25:21] 2026-01-15 13:24:33,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 08:25:21] 2026-01-15 13:24:33,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 08:25:21] 2026-01-15 13:24:33,763 | INFO     | fitting pss+swap vs Time
[2026-01-15 08:25:21] 2026-01-15 13:24:33,763 | INFO     | sum of square deviations: 15695178.0
[2026-01-15 08:25:21] 2026-01-15 13:24:33,763 | INFO     | sum of deviations: -1935365300.0
[2026-01-15 08:25:21] 2026-01-15 13:24:33,763 | INFO     | mean x: 1768482183.0
[2026-01-15 08:25:21] 2026-01-15 13:24:33,763 | INFO     | mean y: 2786976.189189189
[2026-01-15 08:25:21] 2026-01-15 13:24:33,763 | INFO     | intersect: 218073525049.14697
[2026-01-15 08:25:21] 2026-01-15 13:24:33,764 | INFO     | chi2: 0.02905174623315332
[2026-01-15 08:25:21] 2026-01-15 13:24:33,764 | INFO     | current memory leak: -123.31 B/s (using 37 data points, chi2=0.03)
[2026-01-15 08:25:21] 2026-01-15 13:24:33,764 | INFO     | could have reported an average CPU frequency of 1919 MHz (5 samples)
[2026-01-15 08:25:21] 2026-01-15 13:24:33,764 | INFO     | ..............................
[2026-01-15 08:25:21] 2026-01-15 13:24:33,764 | INFO     | . Timing measurements:
[2026-01-15 08:25:21] 2026-01-15 13:24:33,764 | INFO     | . get job = 0 s
[2026-01-15 08:25:21] 2026-01-15 13:24:33,764 | INFO     | . initial setup = 2 s
[2026-01-15 08:25:21] 2026-01-15 13:24:33,765 | INFO     | . payload setup = 6 s
[2026-01-15 08:25:21] 2026-01-15 13:24:33,765 | INFO     | . stage-in = 0 s
[2026-01-15 08:25:21] 2026-01-15 13:24:33,765 | INFO     | . payload execution = 2686 s
[2026-01-15 08:25:21] 2026-01-15 13:24:33,765 | INFO     | . stage-out = 0 s
[2026-01-15 08:25:21] 2026-01-15 13:24:33,765 | INFO     | . log creation = 0 s
[2026-01-15 08:25:21] 2026-01-15 13:24:33,765 | INFO     | ..............................
[2026-01-15 08:25:21] 2026-01-15 13:24:33,844 | INFO     | 
[2026-01-15 08:25:21] 2026-01-15 13:24:33,845 | INFO     | job summary report
[2026-01-15 08:25:21] 2026-01-15 13:24:33,845 | INFO     | --------------------------------------------------
[2026-01-15 08:25:21] 2026-01-15 13:24:33,845 | INFO     | PanDA job id: 6970459417
[2026-01-15 08:25:21] 2026-01-15 13:24:33,845 | INFO     | task id: 48215263
[2026-01-15 08:25:21] 2026-01-15 13:24:33,845 | INFO     | errors: (none)
[2026-01-15 08:25:21] 2026-01-15 13:24:33,845 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 08:25:21] 2026-01-15 13:24:33,846 | INFO     | pilot state: finished 
[2026-01-15 08:25:21] 2026-01-15 13:24:33,846 | INFO     | transexitcode: 0
[2026-01-15 08:25:21] 2026-01-15 13:24:33,846 | INFO     | exeerrorcode: 0
[2026-01-15 08:25:21] 2026-01-15 13:24:33,846 | INFO     | exeerrordiag: 
[2026-01-15 08:25:21] 2026-01-15 13:24:33,846 | INFO     | exitcode: 0
[2026-01-15 08:25:21] 2026-01-15 13:24:33,846 | INFO     | exitmsg: OK
[2026-01-15 08:25:21] 2026-01-15 13:24:33,846 | INFO     | cpuconsumptiontime: 28977 s
[2026-01-15 08:25:21] 2026-01-15 13:24:33,847 | INFO     | nevents: 400
[2026-01-15 08:25:21] 2026-01-15 13:24:33,847 | INFO     | neventsw: 0
[2026-01-15 08:25:21] 2026-01-15 13:24:33,847 | INFO     | pid: 22621
[2026-01-15 08:25:21] 2026-01-15 13:24:33,847 | INFO     | pgrp: 22621
[2026-01-15 08:25:21] 2026-01-15 13:24:33,847 | INFO     | corecount: 12
[2026-01-15 08:25:21] 2026-01-15 13:24:33,847 | INFO     | event service: False
[2026-01-15 08:25:21] 2026-01-15 13:24:33,848 | INFO     | sizes: {0: 2283950, 1: 2283978, 5: 2284240, 11: 2284296, 2696: 2309508, 2698: 2318506, 2701: 2318690, 2706: 2318916}
[2026-01-15 08:25:21] 2026-01-15 13:24:33,848 | INFO     | --------------------------------------------------
[2026-01-15 08:25:21] 2026-01-15 13:24:33,848 | INFO     | 
[2026-01-15 08:25:21] 2026-01-15 13:24:33,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 08:25:21] 2026-01-15 13:24:33,870 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,870 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,871 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,871 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,873 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 08:25:21] 2026-01-15 13:24:33,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,873 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 08:25:21] 2026-01-15 13:24:33,874 | INFO     | job 6970459417 has completed (purged errors)
[2026-01-15 08:25:21] 2026-01-15 13:24:33,874 | INFO     | overall cleanup function is called
[2026-01-15 08:25:21] 2026-01-15 13:24:34,881 | INFO     | --- collectZombieJob: --- 10, [22621]
[2026-01-15 08:25:21] 2026-01-15 13:24:34,882 | INFO     | zombie collector waiting for pid 22621
[2026-01-15 08:25:21] 2026-01-15 13:24:34,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 08:25:21] 2026-01-15 13:24:34,882 | INFO     | collected zombie processes
[2026-01-15 08:25:21] 2026-01-15 13:24:34,882 | INFO     | will attempt to kill all subprocesses of pid=22621
[2026-01-15 08:25:21] 2026-01-15 13:24:34,973 | INFO     | process IDs to be killed: [22621] (in reverse order)
[2026-01-15 08:25:21] 2026-01-15 13:24:35,020 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 08:25:21] 2026-01-15 13:24:35,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 08:25:21] 2026-01-15 13:24:35,024 | INFO     | did not find any defunct processes belonging to 22621
[2026-01-15 08:25:21] 2026-01-15 13:24:35,028 | INFO     | did not find any defunct processes belonging to 22621
[2026-01-15 08:25:21] 2026-01-15 13:24:35,028 | INFO     | ready for new job
[2026-01-15 08:25:21] 2026-01-15 13:24:35,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 08:25:21] 2026-01-15 13:24:35,029 | INFO     | ***************************************
[2026-01-15 08:25:21] 2026-01-15 13:24:35,029 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 08:25:21] 2026-01-15 13:24:35,029 | INFO     | ***************************************
[2026-01-15 08:25:21] 2026-01-15 13:24:35,030 | INFO     | 
[2026-01-15 08:25:21] 2026-01-15 13:24:35,030 | INFO     | architecture information:
[2026-01-15 08:25:21] 2026-01-15 13:24:35,031 | INFO     | executing command: cat /etc/os-release
[2026-01-15 08:25:21] 2026-01-15 13:24:35,045 | INFO     | cat /etc/os-release:
[2026-01-15 08:25:21] NAME="CentOS Linux"
[2026-01-15 08:25:21] VERSION="7 (Core)"
[2026-01-15 08:25:21] ID="centos"
[2026-01-15 08:25:21] ID_LIKE="rhel fedora"
[2026-01-15 08:25:21] VERSION_ID="7"
[2026-01-15 08:25:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 08:25:21] ANSI_COLOR="0;31"
[2026-01-15 08:25:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 08:25:21] HOME_URL="https://www.centos.org/"
[2026-01-15 08:25:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 08:25:21] 
[2026-01-15 08:25:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 08:25:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 08:25:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 08:25:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 08:25:21] 
[2026-01-15 08:25:21] 2026-01-15 13:24:35,045 | INFO     | ***************************************
[2026-01-15 08:25:21] 2026-01-15 13:24:35,547 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 08:25:21] 2026-01-15 13:24:35,563 | INFO     | sufficient remaining disk space (28648144896 B)
[2026-01-15 08:25:21] 2026-01-15 13:24:35,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 08:25:21] 2026-01-15 13:24:35,564 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 08:25:21] 2026-01-15 13:24:35,564 | INFO     | update_server=False
[2026-01-15 08:25:21] 2026-01-15 13:24:35,564 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 08:25:21] 2026-01-15 13:24:35,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:25:21] 2026-01-15 13:24:35,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 08:25:21] 2026-01-15 13:24:35,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:25:21] 2026-01-15 13:24:35,565 | INFO     | aborting loop
[2026-01-15 08:25:21] 2026-01-15 13:24:35,585 | INFO     | all job control threads have been joined
[2026-01-15 08:25:21] 2026-01-15 13:24:35,703 | INFO     | all data control threads have been joined
[2026-01-15 08:25:21] 2026-01-15 13:24:36,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 08:25:21] 2026-01-15 13:24:36,567 | INFO     | [job] retrieve thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:36,570 | INFO     | [job] queue monitor thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:36,571 | INFO     | [job] job monitor thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:36,578 | INFO     | all payload control threads have been joined
[2026-01-15 08:25:21] 2026-01-15 13:24:36,586 | INFO     | [job] control thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:36,707 | INFO     | [data] control thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:37,049 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:37,100 | INFO     | [payload] failed_post thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:37,175 | INFO     | [job] validate thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:37,352 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:37,583 | INFO     | [payload] control thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:37,679 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:37,679 | INFO     | [data] copytool_in thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:37,966 | INFO     | [payload] validate_post thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:38,366 | INFO     | [data] copytool_out thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:39,570 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:24:46,516 | INFO     | job.realtimelogging is not enabled
[2026-01-15 08:25:21] 2026-01-15 13:24:47,517 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 08:25:21] 2026-01-15 13:25:05,899 | INFO     | PID=16238 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 08:25:21] 2026-01-15 13:25:05,900 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 08:25:21] 2026-01-15 13:25:05,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 08:25:21] 2026-01-15 13:25:05,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 08:25:21] 2026-01-15 13:25:15,680 | INFO     | [monitor] cgroup control has ended
[2026-01-15 08:25:21] 2026-01-15 13:25:16,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007075694400)>', '<ExcThread(monitor, started 140006320494336)>']
[2026-01-15 08:25:21] 2026-01-15 13:25:16,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 08:25:21] 2026-01-15 13:25:16,952 | INFO     | [monitor] control thread has ended
[2026-01-15 08:25:21] 2026-01-15 13:25:21,453 | INFO     | all workflow threads have been joined
[2026-01-15 08:25:21] 2026-01-15 13:25:21,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 08:25:21] 2026-01-15 13:25:21,457 | INFO     | traces error code: 0
[2026-01-15 08:25:21] 2026-01-15 13:25:21,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 08:25:21] 2026-01-15 13:25:21,554 [wrapper] ==== pilot stdout END ====
[2026-01-15 08:25:21] 2026-01-15 13:25:21,558 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 08:25:21] 2026-01-15 13:25:21,562 [wrapper] pilotpid: 16238
[2026-01-15 08:25:21] 2026-01-15 13:25:21,566 [wrapper] Pilot exit status: 0
[2026-01-15 08:25:21] 2026-01-15 13:25:21,582 [wrapper] pandaids: 6970459417
[2026-01-15 08:25:21] 2026-01-15 13:25:21,624 [wrapper] cleanup supervisor_pilot  9386 16239
[2026-01-15 08:25:21] 2026-01-15 13:25:21,628 [wrapper] Test setup, not cleaning
[2026-01-15 08:25:21] 2026-01-15 13:25:21,632 [wrapper] apfmon messages muted
[2026-01-15 08:25:21] 2026-01-15 13:25:21,636 [wrapper] ==== wrapper stdout END ====
[2026-01-15 08:25:21] 2026-01-15 13:25:21,640 [wrapper] ==== wrapper stderr END ====
[2026-01-15 08:25:21]  *** Error codes and diagnostics ***
[2026-01-15 08:25:21]     "exeErrorCode": 0,
[2026-01-15 08:25:21]     "exeErrorDiag": "",
[2026-01-15 08:25:21]     "pilotErrorCode": 0,
[2026-01-15 08:25:21]     "pilotErrorDiag": "",
[2026-01-15 08:25:21]  *** Listing of results directory ***
[2026-01-15 08:25:21] total 727588
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 08:25:21] -rwx------ 1 boincer umatlas     36322 Jan 15 03:38 runpilot2-wrapper.sh
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 03:44 queuedata.json
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas       100 Jan 15 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 08:25:21] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 07:38 run_atlas
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas       105 Jan 15 07:38 job.xml
[2026-01-15 08:25:21] -rw-r--r-- 2 boincer umatlas 591147770 Jan 15 07:38 EVNT.32794306._001937.pool.root.1
[2026-01-15 08:25:21] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 07:38 start_atlas.sh
[2026-01-15 08:25:21] drwxrwx--x 2 boincer umatlas      4096 Jan 15 07:38 shared
[2026-01-15 08:25:21] -rw-r--r-- 2 boincer umatlas    592405 Jan 15 07:38 input.tar.gz
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas         0 Jan 15 07:38 boinc_lockfile
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas      2508 Jan 15 07:38 pandaJob.out
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas        57 Jan 15 07:38 setup.sh.local
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas   1004221 Jan 15 07:39 agis_schedconf.cvmfs.json
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas   1516246 Jan 15 07:39 agis_ddmendpoints.agis.ALL.json
[2026-01-15 08:25:21] drwx------ 5 boincer umatlas      4096 Jan 15 07:39 pilot3
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas      5952 Jan 15 08:22 init_data.xml
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas 148446547 Jan 15 08:23 HITS.48215263._049874.pool.root.1
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas       530 Jan 15 08:24 boinc_task_state.xml
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas      1040 Jan 15 08:24 memory_monitor_summary.json
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas    345555 Jan 15 08:24 log.48215263._049874.job.log.tgz.1
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas      7843 Jan 15 08:24 heartbeat.json
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas        95 Jan 15 08:25 pilot_heartbeat.json
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 08:25 boinc_mmap_file
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas        27 Jan 15 08:25 wrapper_checkpoint.txt
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas      4818 Jan 15 08:25 pilotlog.txt
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas    416113 Jan 15 08:25 log.48215263._049874.job.log.1
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas       357 Jan 15 08:25 output.list
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas       620 Jan 15 08:25 runtime_log
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas    778240 Jan 15 08:25 result.tar.gz
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas      9339 Jan 15 08:25 runtime_log.err
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas       658 Jan 15 08:25 idtLDmt2X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFhoKDmUtvRSo.diag
[2026-01-15 08:25:21] -rw-r--r-- 1 boincer umatlas     22018 Jan 15 08:25 stderr.txt
[2026-01-15 08:25:21] HITS file was successfully produced:
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas 148446547 Jan 15 08:23 shared/HITS.pool.root.1
[2026-01-15 08:25:21]  *** Contents of shared directory: ***
[2026-01-15 08:25:21] total 723628
[2026-01-15 08:25:21] -rw-r--r-- 2 boincer umatlas 591147770 Jan 15 07:38 ATLAS.root_0
[2026-01-15 08:25:21] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 07:38 start_atlas.sh
[2026-01-15 08:25:21] -rw-r--r-- 2 boincer umatlas    592405 Jan 15 07:38 input.tar.gz
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas 148446547 Jan 15 08:23 HITS.pool.root.1
[2026-01-15 08:25:21] -rw------- 1 boincer umatlas    778240 Jan 15 08:25 result.tar.gz
08:25:23 (12514): run_atlas exited; CPU time 28956.303281
08:25:23 (12514): called boinc_finish(0)

</stderr_txt>
]]>

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