Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:53:12 (2416655): wrapper (7.7.26015): starting
07:53:12 (2416655): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 07:53:12] Arguments: --nthreads 9
[2026-01-15 07:53:12] Threads: 9
[2026-01-15 07:53:12] Checking for CVMFS
[2026-01-15 07:53:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 07:53:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 07:53:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 07:53:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 07:53:13] 2.13.3.0 2295398 25545 100792 155172 1 188 34123611 37030913 1832 16776704 0 15698831 99.951 1328626 44565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 07:53:13] CVMFS is ok
[2026-01-15 07:53:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 07:53:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 07:53:13] Further information can be found at the LHC@home message board.
[2026-01-15 07:53:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 07:53:13] Checking for apptainer binary...
[2026-01-15 07:53:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 07:53:13] Running /usr/bin/apptainer --version
[2026-01-15 07:53:13] apptainer version 1.4.5-2.el9
[2026-01-15 07:53:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 07:53:13] c-205-36.aglt2.org
[2026-01-15 07:53:13] apptainer works
[2026-01-15 07:53:13] Set ATHENA_PROC_NUMBER=9
[2026-01-15 07:53:13] Set ATHENA_CORE_NUMBER=9
[2026-01-15 07:53:13] Starting ATLAS job with PandaID=6970291415
[2026-01-15 07:53:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 08:48:35]  *** The last 200 lines of the pilot log: ***
[2026-01-15 08:48:35]  protocol_id=None
[2026-01-15 08:48:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 08:48:35]  replicas=None
[2026-01-15 08:48:35]  scope=mc23_13p6TeV
[2026-01-15 08:48:35]  status=None
[2026-01-15 08:48:35]  status_code=0
[2026-01-15 08:48:35]  storage_token=
[2026-01-15 08:48:35]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6970291415/log.48215263._046400.job.log.tgz.1
[2026-01-15 08:48:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/b2/log.48215263._046400.job.log.tgz.1
[2026-01-15 08:48:35]  workdir=None
[2026-01-15 08:48:35] ]
[2026-01-15 08:48:35] 2026-01-15 13:47:56,593 | INFO     | transferring file log.48215263._046400.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6970291415/log.48215263._046400.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 08:48:35] 2026-01-15 13:47:56,594 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6970291415/log.48215263._046400.job.log.tgz.1 /tmp/boinchome/slots/1/log.48215263._046400.job
[2026-01-15 08:48:35] 2026-01-15 13:47:56,609 | INFO     | adding to output.list: log.48215263._046400.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/b2/log.48215263._046400.job.log.tg
[2026-01-15 08:48:35] 2026-01-15 13:47:56,610 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 08:48:35] 2026-01-15 13:47:56,610 | INFO     | summary of transferred files:
[2026-01-15 08:48:35] 2026-01-15 13:47:56,611 | INFO     |  -- lfn=log.48215263._046400.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 08:48:35] 2026-01-15 13:47:56,611 | INFO     | stage-out finished correctly
[2026-01-15 08:48:35] 2026-01-15 13:47:57,917 | INFO     | monitor loop #248: job 0:6970291415 is in state 'finished'
[2026-01-15 08:48:35] 2026-01-15 13:47:57,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:48:35] 2026-01-15 13:47:58,231 | INFO     | time since job start (3275s) is within the limit (349056.0s)
[2026-01-15 08:48:35] 2026-01-15 13:47:59,331 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 08:48:35] 2026-01-15 13:47:59,435 | INFO     | job 6970291415 has state=finished
[2026-01-15 08:48:35] 2026-01-15 13:47:59,436 | INFO     | preparing for final server update for job 6970291415 in state='finished'
[2026-01-15 08:48:35] 2026-01-15 13:47:59,436 | INFO     | this job has now completed (state=finished)
[2026-01-15 08:48:35] 2026-01-15 13:47:59,436 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 08:48:35] 2026-01-15 13:47:59,436 | INFO     | log transfer has been attempted: DONE
[2026-01-15 08:48:35] 2026-01-15 13:47:59,437 | INFO     | job 6970291415 has finished - writing final server update
[2026-01-15 08:48:35] 2026-01-15 13:47:59,437 | INFO     | total number of processed events: 400 (read)
[2026-01-15 08:48:35] 2026-01-15 13:47:59,438 | INFO     | executing command: lscpu
[2026-01-15 08:48:35] 2026-01-15 13:47:59,473 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 08:48:35] 2026-01-15 13:48:00,237 | INFO     | time since job start (3277s) is within the limit (349056.0s)
[2026-01-15 08:48:35] 2026-01-15 13:48:00,420 | INFO     | monitor loop #249: job 0:6970291415 is in state 'finished'
[2026-01-15 08:48:35] 2026-01-15 13:48:00,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:48:35] 2026-01-15 13:48:01,481 | INFO     | PID=2420802 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 08:48:35] 2026-01-15 13:48:01,482 | INFO     | .. there are 3 such processes running
[2026-01-15 08:48:35] 2026-01-15 13:48:02,482 | INFO     | time since job start (3279s) is within the limit (349056.0s)
[2026-01-15 08:48:35] 2026-01-15 13:48:02,885 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 08:48:35] 2026-01-15 13:48:02,891 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2637.5765625000004
[2026-01-15 08:48:35] 2026-01-15 13:48:02,898 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970291415/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 08:48:35] 2026-01-15 13:48:02,898 | INFO     | extracted standard info from prmon json
[2026-01-15 08:48:35] 2026-01-15 13:48:02,899 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 08:48:35] 2026-01-15 13:48:02,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 08:48:35] 2026-01-15 13:48:02,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 08:48:35] 2026-01-15 13:48:02,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 08:48:35] 2026-01-15 13:48:02,901 | INFO     | fitting pss+swap vs Time
[2026-01-15 08:48:35] 2026-01-15 13:48:02,901 | INFO     | sum of square deviations: 32179208.0
[2026-01-15 08:48:35] 2026-01-15 13:48:02,901 | INFO     | sum of deviations: -1467003762.0
[2026-01-15 08:48:35] 2026-01-15 13:48:02,901 | INFO     | mean x: 1768483335.0
[2026-01-15 08:48:35] 2026-01-15 13:48:02,902 | INFO     | mean y: 2640296.212765957
[2026-01-15 08:48:35] 2026-01-15 13:48:02,902 | INFO     | intersect: 80625249326.22078
[2026-01-15 08:48:35] 2026-01-15 13:48:02,902 | INFO     | chi2: 0.023315718290104252
[2026-01-15 08:48:35] 2026-01-15 13:48:02,902 | INFO     | current memory leak: -45.59 B/s (using 47 data points, chi2=0.02)
[2026-01-15 08:48:35] 2026-01-15 13:48:02,902 | INFO     | could have reported an average CPU frequency of 2637 MHz (5 samples)
[2026-01-15 08:48:35] 2026-01-15 13:48:02,903 | INFO     | ..............................
[2026-01-15 08:48:35] 2026-01-15 13:48:02,903 | INFO     | . Timing measurements:
[2026-01-15 08:48:35] 2026-01-15 13:48:02,903 | INFO     | . get job = 0 s
[2026-01-15 08:48:35] 2026-01-15 13:48:02,903 | INFO     | . initial setup = 2 s
[2026-01-15 08:48:35] 2026-01-15 13:48:02,903 | INFO     | . payload setup = 5 s
[2026-01-15 08:48:35] 2026-01-15 13:48:02,903 | INFO     | . stage-in = 0 s
[2026-01-15 08:48:35] 2026-01-15 13:48:02,903 | INFO     | . payload execution = 3248 s
[2026-01-15 08:48:35] 2026-01-15 13:48:02,903 | INFO     | . stage-out = 0 s
[2026-01-15 08:48:35] 2026-01-15 13:48:02,904 | INFO     | . log creation = 0 s
[2026-01-15 08:48:35] 2026-01-15 13:48:02,904 | INFO     | ..............................
[2026-01-15 08:48:35] 2026-01-15 13:48:03,009 | INFO     | 
[2026-01-15 08:48:35] 2026-01-15 13:48:03,010 | INFO     | job summary report
[2026-01-15 08:48:35] 2026-01-15 13:48:03,010 | INFO     | --------------------------------------------------
[2026-01-15 08:48:35] 2026-01-15 13:48:03,010 | INFO     | PanDA job id: 6970291415
[2026-01-15 08:48:35] 2026-01-15 13:48:03,010 | INFO     | task id: 48215263
[2026-01-15 08:48:35] 2026-01-15 13:48:03,010 | INFO     | errors: (none)
[2026-01-15 08:48:35] 2026-01-15 13:48:03,010 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 08:48:35] 2026-01-15 13:48:03,010 | INFO     | pilot state: finished 
[2026-01-15 08:48:35] 2026-01-15 13:48:03,011 | INFO     | transexitcode: 0
[2026-01-15 08:48:35] 2026-01-15 13:48:03,011 | INFO     | exeerrorcode: 0
[2026-01-15 08:48:35] 2026-01-15 13:48:03,011 | INFO     | exeerrordiag: 
[2026-01-15 08:48:35] 2026-01-15 13:48:03,011 | INFO     | exitcode: 0
[2026-01-15 08:48:35] 2026-01-15 13:48:03,011 | INFO     | exitmsg: OK
[2026-01-15 08:48:35] 2026-01-15 13:48:03,011 | INFO     | cpuconsumptiontime: 25704 s
[2026-01-15 08:48:35] 2026-01-15 13:48:03,011 | INFO     | nevents: 400
[2026-01-15 08:48:35] 2026-01-15 13:48:03,011 | INFO     | neventsw: 0
[2026-01-15 08:48:35] 2026-01-15 13:48:03,011 | INFO     | pid: 2427192
[2026-01-15 08:48:35] 2026-01-15 13:48:03,012 | INFO     | pgrp: 2427192
[2026-01-15 08:48:35] 2026-01-15 13:48:03,012 | INFO     | corecount: 9
[2026-01-15 08:48:35] 2026-01-15 13:48:03,012 | INFO     | event service: False
[2026-01-15 08:48:35] 2026-01-15 13:48:03,012 | INFO     | sizes: {0: 2283123, 1: 2283979, 5: 2284241, 12: 2284297, 3258: 2318844, 3261: 2318844, 3265: 2319198}
[2026-01-15 08:48:35] 2026-01-15 13:48:03,012 | INFO     | --------------------------------------------------
[2026-01-15 08:48:35] 2026-01-15 13:48:03,012 | INFO     | 
[2026-01-15 08:48:35] 2026-01-15 13:48:03,012 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 08:48:35] 2026-01-15 13:48:03,029 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,029 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,029 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,029 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,031 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 08:48:35] 2026-01-15 13:48:03,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,031 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 08:48:35] 2026-01-15 13:48:03,031 | INFO     | job 6970291415 has completed (purged errors)
[2026-01-15 08:48:35] 2026-01-15 13:48:03,031 | INFO     | overall cleanup function is called
[2026-01-15 08:48:35] 2026-01-15 13:48:04,039 | INFO     | --- collectZombieJob: --- 10, [2427192]
[2026-01-15 08:48:35] 2026-01-15 13:48:04,040 | INFO     | zombie collector waiting for pid 2427192
[2026-01-15 08:48:35] 2026-01-15 13:48:04,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 08:48:35] 2026-01-15 13:48:04,040 | INFO     | collected zombie processes
[2026-01-15 08:48:35] 2026-01-15 13:48:04,040 | INFO     | will attempt to kill all subprocesses of pid=2427192
[2026-01-15 08:48:35] 2026-01-15 13:48:04,229 | INFO     | process IDs to be killed: [2427192] (in reverse order)
[2026-01-15 08:48:35] 2026-01-15 13:48:04,281 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 08:48:35] 2026-01-15 13:48:04,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 08:48:35] 2026-01-15 13:48:04,287 | INFO     | did not find any defunct processes belonging to 2427192
[2026-01-15 08:48:35] 2026-01-15 13:48:04,291 | INFO     | did not find any defunct processes belonging to 2427192
[2026-01-15 08:48:35] 2026-01-15 13:48:04,292 | INFO     | ready for new job
[2026-01-15 08:48:35] 2026-01-15 13:48:04,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 08:48:35] 2026-01-15 13:48:04,293 | INFO     | ***************************************
[2026-01-15 08:48:35] 2026-01-15 13:48:04,294 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 08:48:35] 2026-01-15 13:48:04,294 | INFO     | ***************************************
[2026-01-15 08:48:35] 2026-01-15 13:48:04,294 | INFO     | 
[2026-01-15 08:48:35] 2026-01-15 13:48:04,296 | INFO     | architecture information:
[2026-01-15 08:48:35] 2026-01-15 13:48:04,296 | INFO     | executing command: cat /etc/os-release
[2026-01-15 08:48:35] 2026-01-15 13:48:04,309 | INFO     | cat /etc/os-release:
[2026-01-15 08:48:35] NAME="CentOS Linux"
[2026-01-15 08:48:35] VERSION="7 (Core)"
[2026-01-15 08:48:35] ID="centos"
[2026-01-15 08:48:35] ID_LIKE="rhel fedora"
[2026-01-15 08:48:35] VERSION_ID="7"
[2026-01-15 08:48:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 08:48:35] ANSI_COLOR="0;31"
[2026-01-15 08:48:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 08:48:35] HOME_URL="https://www.centos.org/"
[2026-01-15 08:48:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 08:48:35] 
[2026-01-15 08:48:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 08:48:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 08:48:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 08:48:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 08:48:35] 
[2026-01-15 08:48:35] 2026-01-15 13:48:04,309 | INFO     | ***************************************
[2026-01-15 08:48:35] 2026-01-15 13:48:04,812 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 08:48:35] 2026-01-15 13:48:04,825 | INFO     | sufficient remaining disk space (39638269952 B)
[2026-01-15 08:48:35] 2026-01-15 13:48:04,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 08:48:35] 2026-01-15 13:48:04,826 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 08:48:35] 2026-01-15 13:48:04,826 | INFO     | update_server=False
[2026-01-15 08:48:35] 2026-01-15 13:48:04,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 08:48:35] 2026-01-15 13:48:04,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:48:36] 2026-01-15 13:48:04,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:48:36] 2026-01-15 13:48:04,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 08:48:36] 2026-01-15 13:48:04,827 | INFO     | aborting loop
[2026-01-15 08:48:36] 2026-01-15 13:48:05,344 | INFO     | all data control threads have been joined
[2026-01-15 08:48:36] 2026-01-15 13:48:05,446 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 08:48:36] 2026-01-15 13:48:05,454 | INFO     | all job control threads have been joined
[2026-01-15 08:48:36] 2026-01-15 13:48:05,831 | INFO     | [job] retrieve thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:05,832 | INFO     | [job] queue monitor thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:05,832 | INFO     | [job] job monitor thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:05,866 | INFO     | all payload control threads have been joined
[2026-01-15 08:48:36] 2026-01-15 13:48:05,922 | INFO     | [data] copytool_in thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:06,329 | INFO     | [job] validate thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:06,350 | INFO     | [data] control thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:06,454 | INFO     | [payload] validate_post thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:06,459 | INFO     | [job] control thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:06,587 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:06,715 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:06,832 | INFO     | [data] copytool_out thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:06,871 | INFO     | [payload] control thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:07,100 | INFO     | [payload] failed_post thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:07,253 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:09,452 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:15,343 | INFO     | job.realtimelogging is not enabled
[2026-01-15 08:48:36] 2026-01-15 13:48:16,348 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 08:48:36] 2026-01-15 13:48:28,013 | INFO     | [monitor] cgroup control has ended
[2026-01-15 08:48:36] 2026-01-15 13:48:29,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475947149120)>', '<ExcThread(monitor, started 140475453384448)>']
[2026-01-15 08:48:36] 2026-01-15 13:48:34,844 | INFO     | all workflow threads have been joined
[2026-01-15 08:48:36] 2026-01-15 13:48:34,845 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 08:48:36] 2026-01-15 13:48:34,845 | INFO     | traces error code: 0
[2026-01-15 08:48:36] 2026-01-15 13:48:34,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 08:48:36] 2026-01-15 13:48:35,788 | INFO     | PID=2420802 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 08:48:36] 2026-01-15 13:48:35,788 | INFO     | .. there are 3 such processes running
[2026-01-15 08:48:36] 2026-01-15 13:48:35,789 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 08:48:36] 2026-01-15 13:48:35,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 08:48:36] 2026-01-15 13:48:35,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 08:48:36] 2026-01-15 13:48:35,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 08:48:36] 2026-01-15 13:48:35,790 | INFO     | [monitor] control thread has ended
[2026-01-15 08:48:36] 2026-01-15 13:48:35,884 [wrapper] ==== pilot stdout END ====
[2026-01-15 08:48:36] 2026-01-15 13:48:35,887 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 08:48:36] 2026-01-15 13:48:35,889 [wrapper] pilotpid: 2420802
[2026-01-15 08:48:36] 2026-01-15 13:48:35,892 [wrapper] Pilot exit status: 0
[2026-01-15 08:48:36] 2026-01-15 13:48:35,900 [wrapper] pandaids: 6970291415
[2026-01-15 08:48:36] 2026-01-15 13:48:35,937 [wrapper] cleanup supervisor_pilot 2500696 2420803
[2026-01-15 08:48:36] 2026-01-15 13:48:35,939 [wrapper] Test setup, not cleaning
[2026-01-15 08:48:36] 2026-01-15 13:48:35,942 [wrapper] apfmon messages muted
[2026-01-15 08:48:36] 2026-01-15 13:48:35,944 [wrapper] ==== wrapper stdout END ====
[2026-01-15 08:48:36] 2026-01-15 13:48:35,947 [wrapper] ==== wrapper stderr END ====
[2026-01-15 08:48:36]  *** Error codes and diagnostics ***
[2026-01-15 08:48:36]     "exeErrorCode": 0,
[2026-01-15 08:48:36]     "exeErrorDiag": "",
[2026-01-15 08:48:36]     "pilotErrorCode": 0,
[2026-01-15 08:48:36]     "pilotErrorDiag": "",
[2026-01-15 08:48:36]  *** Listing of results directory ***
[2026-01-15 08:48:36] total 731496
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 23:50 pilot3.tar.gz
[2026-01-15 08:48:36] -rwx------. 1 boincer umatlas     36322 Jan 14 23:52 runpilot2-wrapper.sh
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 23:54 queuedata.json
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas       100 Jan 15 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 08:48:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 07:53 run_atlas
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas       105 Jan 15 07:53 job.xml
[2026-01-15 08:48:36] -rw-r--r--. 2 boincer umatlas 594047290 Jan 15 07:53 EVNT.32794306._001808.pool.root.1
[2026-01-15 08:48:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 07:53 start_atlas.sh
[2026-01-15 08:48:36] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 07:53 shared
[2026-01-15 08:48:36] -rw-r--r--. 2 boincer umatlas    592399 Jan 15 07:53 input.tar.gz
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas         0 Jan 15 07:53 boinc_lockfile
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 07:53 pandaJob.out
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas   1004221 Jan 15 07:53 agis_schedconf.cvmfs.json
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas   1516246 Jan 15 07:53 agis_ddmendpoints.agis.ALL.json
[2026-01-15 08:48:36] drwx------. 5 boincer umatlas      4096 Jan 15 07:53 pilot3
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas      6529 Jan 15 08:38 init_data.xml
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas 149434480 Jan 15 08:47 HITS.48215263._046400.pool.root.1
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas       530 Jan 15 08:47 boinc_task_state.xml
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas      1033 Jan 15 08:47 memory_monitor_summary.json
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas    317043 Jan 15 08:47 log.48215263._046400.job.log.tgz.1
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas      7818 Jan 15 08:48 heartbeat.json
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 08:48 boinc_mmap_file
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas        27 Jan 15 08:48 wrapper_checkpoint.txt
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas        95 Jan 15 08:48 pilot_heartbeat.json
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas       822 Jan 15 08:48 pilotlog.txt
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas    503723 Jan 15 08:48 log.48215263._046400.job.log.1
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas       357 Jan 15 08:48 output.list
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas       620 Jan 15 08:48 runtime_log
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas    839680 Jan 15 08:48 result.tar.gz
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas      8817 Jan 15 08:48 runtime_log.err
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas       650 Jan 15 08:48 OOANDmAWU08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmI1nKDmJlJxxm.diag
[2026-01-15 08:48:36] -rw-r--r--. 1 boincer umatlas     21889 Jan 15 08:48 stderr.txt
[2026-01-15 08:48:36] HITS file was successfully produced:
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas 149434480 Jan 15 08:47 shared/HITS.pool.root.1
[2026-01-15 08:48:36]  *** Contents of shared directory: ***
[2026-01-15 08:48:36] total 727488
[2026-01-15 08:48:36] -rw-r--r--. 2 boincer umatlas 594047290 Jan 15 07:53 ATLAS.root_0
[2026-01-15 08:48:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 07:53 start_atlas.sh
[2026-01-15 08:48:36] -rw-r--r--. 2 boincer umatlas    592399 Jan 15 07:53 input.tar.gz
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas 149434480 Jan 15 08:47 HITS.pool.root.1
[2026-01-15 08:48:36] -rw-------. 1 boincer umatlas    839680 Jan 15 08:48 result.tar.gz
08:48:37 (2416655): run_atlas exited; CPU time 25757.776455
08:48:37 (2416655): called boinc_finish(0)

</stderr_txt>
]]>

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