Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:31:59 (3842325): wrapper (7.7.26015): starting
14:31:59 (3842325): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 14:31:59] Arguments: --nthreads 3
[2026-01-15 14:31:59] Threads: 3
[2026-01-15 14:31:59] Checking for CVMFS
[2026-01-15 14:31:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 14:31:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 14:31:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 14:31:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 14:31:59] 2.9.2.0 2866369 2451 81980 155174 2 57 23983117 36864001 0 130560 0 2661211 99.992 104899 3812 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 14:31:59] CVMFS is ok
[2026-01-15 14:31:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 14:31:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 14:31:59] Further information can be found at the LHC@home message board.
[2026-01-15 14:31:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 14:31:59] Checking for apptainer binary...
[2026-01-15 14:31:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 14:31:59] Running /usr/bin/apptainer --version
[2026-01-15 14:31:59] apptainer version 1.4.1-1.1
[2026-01-15 14:31:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 14:31:59] magicA161a
[2026-01-15 14:31:59] apptainer works
[2026-01-15 14:31:59] Set ATHENA_PROC_NUMBER=3
[2026-01-15 14:31:59] Set ATHENA_CORE_NUMBER=3
[2026-01-15 14:31:59] Starting ATLAS job with PandaID=6970291546
[2026-01-15 14:31:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 15:25:13]  *** The last 200 lines of the pilot log: ***
[2026-01-15 15:25:13] 2026-01-15 14:24:10,863 | INFO     | all data control threads have been joined
[2026-01-15 15:25:13] 2026-01-15 14:24:10,873 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 15:25:13] 2026-01-15 14:24:10,873 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 15:25:13] 2026-01-15 14:24:10,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 15:25:13] 2026-01-15 14:24:10,873 | INFO     | will abort loop
[2026-01-15 15:25:13] 2026-01-15 14:24:11,179 | INFO     | all job control threads have been joined
[2026-01-15 15:25:13] 2026-01-15 14:24:11,676 | INFO     | all payload control threads have been joined
[2026-01-15 15:25:13] 2026-01-15 14:24:11,794 | INFO     | [job] retrieve thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:11,795 | INFO     | [job] queue monitor thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:11,831 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:11,868 | INFO     | [data] control thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:11,879 | INFO     | [job] job monitor thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:12,185 | INFO     | [job] control thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:12,334 | INFO     | [data] copytool_in thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:12,652 | INFO     | [payload] validate_post thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:12,681 | INFO     | [payload] control thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:12,795 | INFO     | [data] copytool_out thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:12,848 | INFO     | [job] validate thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:12,957 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:13,034 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:13,066 | INFO     | [payload] failed_post thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:13,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 15:25:13] 2026-01-15 14:24:17,456 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:20,962 | INFO     | job.realtimelogging is not enabled
[2026-01-15 15:25:13] 2026-01-15 14:24:21,967 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 15:25:13] 2026-01-15 14:24:41,570 | INFO     | PID=3846051 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 15:25:13] 2026-01-15 14:24:41,571 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 15:25:13] 2026-01-15 14:24:41,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 15:25:13] 2026-01-15 14:24:41,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 15:25:13] 2026-01-15 14:25:08,214 | INFO     | [monitor] cgroup control has ended
[2026-01-15 15:25:13] 2026-01-15 14:25:08,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144297047872)>', '<ExcThread(monitor, started 140143809771264)>']
[2026-01-15 15:25:13] 2026-01-15 14:25:09,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 15:25:13] 2026-01-15 14:25:09,716 | INFO     | [monitor] control thread has ended
[2026-01-15 15:25:13] 2026-01-15 14:25:13,805 | INFO     | all workflow threads have been joined
[2026-01-15 15:25:13] 2026-01-15 14:25:13,805 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 15:25:13] 2026-01-15 14:25:13,805 | INFO     | traces error code: 0
[2026-01-15 15:25:13] 2026-01-15 14:25:13,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 15:25:13] 2026-01-15 14:25:13,855 [wrapper] ==== pilot stdout END ====
[2026-01-15 15:25:13] 2026-01-15 14:25:13,857 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 15:25:13] 2026-01-15 14:25:13,859 [wrapper] pilotpid: 3846051
[2026-01-15 15:25:13] 2026-01-15 14:25:13,862 [wrapper] Pilot exit status: 0
[2026-01-15 15:25:13] 2026-01-15 14:25:13,868 [wrapper] pandaids: 6970291546
[2026-01-15 15:25:13] 2026-01-15 14:25:13,885 [wrapper] cleanup supervisor_pilot 3861678 3846052
[2026-01-15 15:25:13] 2026-01-15 14:25:13,887 [wrapper] Test setup, not cleaning
[2026-01-15 15:25:13] 2026-01-15 14:25:13,889 [wrapper] apfmon messages muted
[2026-01-15 15:25:13] 2026-01-15 14:25:13,892 [wrapper] ==== wrapper stdout END ====
[2026-01-15 15:25:13] 2026-01-15 14:25:13,894 [wrapper] ==== wrapper stderr END ====
[2026-01-15 15:25:13]  *** Error codes and diagnostics ***
[2026-01-15 15:25:13]     "exeErrorCode": 0,
[2026-01-15 15:25:13]     "exeErrorDiag": "",
[2026-01-15 15:25:13]     "pilotErrorCode": 0,
[2026-01-15 15:25:13]     "pilotErrorDiag": "",
[2026-01-15 15:25:13]  *** Listing of results directory ***
[2026-01-15 15:25:13] total 729768
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc    579449 Jan 15 05:50 pilot3.tar.gz
[2026-01-15 15:25:13] -rwx------ 1 boinc boinc     36322 Jan 15 05:52 runpilot2-wrapper.sh
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc      5112 Jan 15 05:54 queuedata.json
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc       100 Jan 15 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 15:25:13] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 14:31 run_atlas
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc       105 Jan 15 14:31 job.xml
[2026-01-15 15:25:13] -rw-r--r-- 2 boinc boinc 593729126 Jan 15 14:31 EVNT.32794306._001813.pool.root.1
[2026-01-15 15:25:13] drwxrwx--x 2 boinc boinc      4096 Jan 15 14:31 shared
[2026-01-15 15:25:13] -rw-r--r-- 2 boinc boinc    592407 Jan 15 14:31 input.tar.gz
[2026-01-15 15:25:13] -rw-r--r-- 2 boinc boinc     15847 Jan 15 14:31 start_atlas.sh
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc         0 Jan 15 14:31 boinc_setup_complete
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc      6448 Jan 15 14:31 init_data.xml
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc         0 Jan 15 14:31 boinc_lockfile
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc      2508 Jan 15 14:31 pandaJob.out
[2026-01-15 15:25:13] -rw------- 1 boinc boinc   1004248 Jan 15 14:32 agis_schedconf.cvmfs.json
[2026-01-15 15:25:13] -rw------- 1 boinc boinc   1516246 Jan 15 14:32 agis_ddmendpoints.agis.ALL.json
[2026-01-15 15:25:13] drwx------ 5 boinc boinc      4096 Jan 15 14:32 pilot3
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc       529 Jan 15 15:23 boinc_task_state.xml
[2026-01-15 15:25:13] -rw------- 1 boinc boinc 148219131 Jan 15 15:23 HITS.48215263._046531.pool.root.1
[2026-01-15 15:25:13] -rw------- 1 boinc boinc      1016 Jan 15 15:23 memory_monitor_summary.json
[2026-01-15 15:25:13] -rw------- 1 boinc boinc    232705 Jan 15 15:23 log.48215263._046531.job.log.tgz.1
[2026-01-15 15:25:13] -rw------- 1 boinc boinc      7749 Jan 15 15:24 heartbeat.json
[2026-01-15 15:25:13] -rw------- 1 boinc boinc        95 Jan 15 15:24 pilot_heartbeat.json
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc        26 Jan 15 15:25 wrapper_checkpoint.txt
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc      8192 Jan 15 15:25 boinc_mmap_file
[2026-01-15 15:25:13] -rw------- 1 boinc boinc      5010 Jan 15 15:25 pilotlog.txt
[2026-01-15 15:25:13] -rw------- 1 boinc boinc    478600 Jan 15 15:25 log.48215263._046531.job.log.1
[2026-01-15 15:25:13] -rw------- 1 boinc boinc       357 Jan 15 15:25 output.list
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc       620 Jan 15 15:25 runtime_log
[2026-01-15 15:25:13] -rw------- 1 boinc boinc    727040 Jan 15 15:25 result.tar.gz
[2026-01-15 15:25:13] -rw------- 1 boinc boinc       660 Jan 15 15:25 wy7MDmLWU08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLBuKDmPWbKkm.diag
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc      8917 Jan 15 15:25 runtime_log.err
[2026-01-15 15:25:13] -rw-r--r-- 1 boinc boinc      7265 Jan 15 15:25 stderr.txt
[2026-01-15 15:25:13] HITS file was successfully produced:
[2026-01-15 15:25:13] -rw------- 1 boinc boinc 148219131 Jan 15 15:23 shared/HITS.pool.root.1
[2026-01-15 15:25:13]  *** Contents of shared directory: ***
[2026-01-15 15:25:13] total 725880
[2026-01-15 15:25:13] -rw-r--r-- 2 boinc boinc 593729126 Jan 15 14:31 ATLAS.root_0
[2026-01-15 15:25:13] -rw-r--r-- 2 boinc boinc    592407 Jan 15 14:31 input.tar.gz
[2026-01-15 15:25:13] -rw-r--r-- 2 boinc boinc     15847 Jan 15 14:31 start_atlas.sh
[2026-01-15 15:25:13] -rw------- 1 boinc boinc 148219131 Jan 15 15:23 HITS.pool.root.1
[2026-01-15 15:25:13] -rw------- 1 boinc boinc    727040 Jan 15 15:25 result.tar.gz
15:25:15 (3842325): run_atlas exited; CPU time 8733.338113
15:25:15 (3842325): called boinc_finish(0)

</stderr_txt>
]]>

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