Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:18:59 (25313): wrapper (7.7.26015): starting
07:18:59 (25313): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 07:18:59] Arguments: --nthreads 12
[2026-01-15 07:18:59] Threads: 12
[2026-01-15 07:18:59] Checking for CVMFS
[2026-01-15 07:18:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 07:18:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 07:18:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 07:18:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 07:18:59] 2.11.2.0 2924 359626 100144 155171 0 56 18627281 20275200 1 130560 4 155064836 99.949 22163803 16263 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 07:18:59] CVMFS is ok
[2026-01-15 07:18:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 07:18:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 07:18:59] Further information can be found at the LHC@home message board.
[2026-01-15 07:18:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 07:18:59] Checking for apptainer binary...
[2026-01-15 07:18:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 07:18:59] Running /usr/bin/apptainer --version
[2026-01-15 07:18:59] apptainer version 1.3.2-1.el7
[2026-01-15 07:18:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 07:19:01] c-205-28.aglt2.org
[2026-01-15 07:19:01] apptainer works
[2026-01-15 07:19:01] Set ATHENA_PROC_NUMBER=12
[2026-01-15 07:19:01] Set ATHENA_CORE_NUMBER=12
[2026-01-15 07:19:01] Starting ATLAS job with PandaID=6970924139
[2026-01-15 07:19:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 08:06:25]  *** The last 200 lines of the pilot log: ***
[2026-01-15 08:06:25]  replicas=None
[2026-01-15 08:06:25]  scope=mc23_13p6TeV
[2026-01-15 08:06:25]  status=None
[2026-01-15 08:06:25]  status_code=0
[2026-01-15 08:06:25]  storage_token=
[2026-01-15 08:06:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6970924139/log.48215263._051761.job.log.tgz.1
[2026-01-15 08:06:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/47/log.48215263._051761.job.log.tgz.1
[2026-01-15 08:06:25]  workdir=None
[2026-01-15 08:06:25] ]
[2026-01-15 08:06:25] 2026-01-15 13:05:39,802 | INFO     | transferring file log.48215263._051761.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6970924139/log.48215263._051761.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 08:06:25] 2026-01-15 13:05:39,802 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6970924139/log.48215263._051761.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._051761.job
[2026-01-15 08:06:25] 2026-01-15 13:05:39,824 | INFO     | adding to output.list: log.48215263._051761.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/47/log.48215263._051761.job.log.tg
[2026-01-15 08:06:25] 2026-01-15 13:05:39,825 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 08:06:25] 2026-01-15 13:05:39,825 | INFO     | summary of transferred files:
[2026-01-15 08:06:25] 2026-01-15 13:05:39,825 | INFO     |  -- lfn=log.48215263._051761.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 08:06:25] 2026-01-15 13:05:39,825 | INFO     | stage-out finished correctly
[2026-01-15 08:06:25] 2026-01-15 13:05:40,230 | WARNING  | process 3157 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 08:06:25] 2026-01-15 13:05:40,230 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970924139/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 08:06:25] 2026-01-15 13:05:40,319 | INFO     | number of running child processes to parent process 3157: 1
[2026-01-15 08:06:25] 2026-01-15 13:05:40,319 | INFO     | maximum number of monitored processes: 7
[2026-01-15 08:06:25] 2026-01-15 13:05:40,454 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 08:06:25] 2026-01-15 13:05:41,165 | INFO     | time since job start (2786s) is within the limit (349056.0s)
[2026-01-15 08:06:25] 2026-01-15 13:05:41,638 | INFO     | job 6970924139 has state=finished
[2026-01-15 08:06:25] 2026-01-15 13:05:41,638 | INFO     | preparing for final server update for job 6970924139 in state='finished'
[2026-01-15 08:06:25] 2026-01-15 13:05:41,639 | INFO     | this job has now completed (state=finished)
[2026-01-15 08:06:25] 2026-01-15 13:05:41,639 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 08:06:25] 2026-01-15 13:05:41,639 | INFO     | log transfer has been attempted: DONE
[2026-01-15 08:06:25] 2026-01-15 13:05:41,639 | INFO     | job 6970924139 has finished - writing final server update
[2026-01-15 08:06:25] 2026-01-15 13:05:41,639 | INFO     | total number of processed events: 400 (read)
[2026-01-15 08:06:25] 2026-01-15 13:05:41,640 | INFO     | executing command: lscpu
[2026-01-15 08:06:25] 2026-01-15 13:05:41,668 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 08:06:25] 2026-01-15 13:05:42,286 | INFO     | PID=29057 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 08:06:25] 2026-01-15 13:05:42,822 | INFO     | monitor loop #210: job 0:6970924139 is in state 'finished'
[2026-01-15 08:06:25] 2026-01-15 13:05:42,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:06:25] 2026-01-15 13:05:43,287 | INFO     | time since job start (2788s) is within the limit (349056.0s)
[2026-01-15 08:06:25] 2026-01-15 13:05:45,292 | INFO     | time since job start (2790s) is within the limit (349056.0s)
[2026-01-15 08:06:25] 2026-01-15 13:05:45,325 | INFO     | monitor loop #211: job 0:6970924139 is in state 'finished'
[2026-01-15 08:06:25] 2026-01-15 13:05:45,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:06:25] 2026-01-15 13:05:46,398 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 08:06:25] 2026-01-15 13:05:46,401 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2026-01-15 08:06:25] 2026-01-15 13:05:46,404 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970924139/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 08:06:25] 2026-01-15 13:05:46,404 | INFO     | extracted standard info from prmon json
[2026-01-15 08:06:25] 2026-01-15 13:05:46,404 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 08:06:25] 2026-01-15 13:05:46,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 08:06:25] 2026-01-15 13:05:46,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 08:06:25] 2026-01-15 13:05:46,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 08:06:25] 2026-01-15 13:05:46,406 | INFO     | fitting pss+swap vs Time
[2026-01-15 08:06:25] 2026-01-15 13:05:46,406 | INFO     | sum of square deviations: 18381740.0
[2026-01-15 08:06:25] 2026-01-15 13:05:46,406 | INFO     | sum of deviations: -1561120540.0
[2026-01-15 08:06:25] 2026-01-15 13:05:46,407 | INFO     | mean x: 1768481048.0
[2026-01-15 08:06:25] 2026-01-15 13:05:46,407 | INFO     | mean y: 2765748.9487179485
[2026-01-15 08:06:25] 2026-01-15 13:05:46,407 | INFO     | intersect: 150195951412.1953
[2026-01-15 08:06:25] 2026-01-15 13:05:46,407 | INFO     | chi2: 0.0320287836646535
[2026-01-15 08:06:25] 2026-01-15 13:05:46,407 | INFO     | current memory leak: -84.93 B/s (using 39 data points, chi2=0.03)
[2026-01-15 08:06:25] 2026-01-15 13:05:46,407 | INFO     | could have reported an average CPU frequency of 1924 MHz (5 samples)
[2026-01-15 08:06:25] 2026-01-15 13:05:46,408 | INFO     | ..............................
[2026-01-15 08:06:25] 2026-01-15 13:05:46,408 | INFO     | . Timing measurements:
[2026-01-15 08:06:25] 2026-01-15 13:05:46,408 | INFO     | . get job = 0 s
[2026-01-15 08:06:25] 2026-01-15 13:05:46,408 | INFO     | . initial setup = 2 s
[2026-01-15 08:06:25] 2026-01-15 13:05:46,408 | INFO     | . payload setup = 7 s
[2026-01-15 08:06:25] 2026-01-15 13:05:46,408 | INFO     | . stage-in = 0 s
[2026-01-15 08:06:25] 2026-01-15 13:05:46,408 | INFO     | . payload execution = 2756 s
[2026-01-15 08:06:25] 2026-01-15 13:05:46,408 | INFO     | . stage-out = 0 s
[2026-01-15 08:06:25] 2026-01-15 13:05:46,408 | INFO     | . log creation = 0 s
[2026-01-15 08:06:25] 2026-01-15 13:05:46,409 | INFO     | ..............................
[2026-01-15 08:06:25] 2026-01-15 13:05:46,488 | INFO     | 
[2026-01-15 08:06:25] 2026-01-15 13:05:46,488 | INFO     | job summary report
[2026-01-15 08:06:25] 2026-01-15 13:05:46,488 | INFO     | --------------------------------------------------
[2026-01-15 08:06:25] 2026-01-15 13:05:46,489 | INFO     | PanDA job id: 6970924139
[2026-01-15 08:06:25] 2026-01-15 13:05:46,489 | INFO     | task id: 48215263
[2026-01-15 08:06:25] 2026-01-15 13:05:46,489 | INFO     | errors: (none)
[2026-01-15 08:06:25] 2026-01-15 13:05:46,489 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 08:06:25] 2026-01-15 13:05:46,489 | INFO     | pilot state: finished 
[2026-01-15 08:06:25] 2026-01-15 13:05:46,489 | INFO     | transexitcode: 0
[2026-01-15 08:06:25] 2026-01-15 13:05:46,490 | INFO     | exeerrorcode: 0
[2026-01-15 08:06:25] 2026-01-15 13:05:46,490 | INFO     | exeerrordiag: 
[2026-01-15 08:06:25] 2026-01-15 13:05:46,490 | INFO     | exitcode: 0
[2026-01-15 08:06:25] 2026-01-15 13:05:46,490 | INFO     | exitmsg: OK
[2026-01-15 08:06:25] 2026-01-15 13:05:46,490 | INFO     | cpuconsumptiontime: 29548 s
[2026-01-15 08:06:25] 2026-01-15 13:05:46,490 | INFO     | nevents: 400
[2026-01-15 08:06:25] 2026-01-15 13:05:46,491 | INFO     | neventsw: 0
[2026-01-15 08:06:25] 2026-01-15 13:05:46,491 | INFO     | pid: 3157
[2026-01-15 08:06:25] 2026-01-15 13:05:46,491 | INFO     | pgrp: 3157
[2026-01-15 08:06:25] 2026-01-15 13:05:46,491 | INFO     | corecount: 12
[2026-01-15 08:06:25] 2026-01-15 13:05:46,491 | INFO     | event service: False
[2026-01-15 08:06:25] 2026-01-15 13:05:46,491 | INFO     | sizes: {0: 2283902, 1: 2283902, 5: 2284192, 11: 2284248, 2767: 2309489, 2768: 2318487, 2769: 2318671, 2775: 2318897}
[2026-01-15 08:06:25] 2026-01-15 13:05:46,492 | INFO     | --------------------------------------------------
[2026-01-15 08:06:25] 2026-01-15 13:05:46,492 | INFO     | 
[2026-01-15 08:06:25] 2026-01-15 13:05:46,492 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 08:06:25] 2026-01-15 13:05:46,514 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,515 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,515 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,515 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,518 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 08:06:25] 2026-01-15 13:05:46,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,518 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 08:06:25] 2026-01-15 13:05:46,518 | INFO     | job 6970924139 has completed (purged errors)
[2026-01-15 08:06:25] 2026-01-15 13:05:46,518 | INFO     | overall cleanup function is called
[2026-01-15 08:06:25] 2026-01-15 13:05:47,522 | INFO     | --- collectZombieJob: --- 10, [3157]
[2026-01-15 08:06:25] 2026-01-15 13:05:47,522 | INFO     | zombie collector waiting for pid 3157
[2026-01-15 08:06:25] 2026-01-15 13:05:47,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 08:06:25] 2026-01-15 13:05:47,522 | INFO     | collected zombie processes
[2026-01-15 08:06:25] 2026-01-15 13:05:47,522 | INFO     | will attempt to kill all subprocesses of pid=3157
[2026-01-15 08:06:25] 2026-01-15 13:05:47,616 | INFO     | process IDs to be killed: [3157] (in reverse order)
[2026-01-15 08:06:25] 2026-01-15 13:05:47,664 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 08:06:25] 2026-01-15 13:05:47,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 08:06:25] 2026-01-15 13:05:47,668 | INFO     | did not find any defunct processes belonging to 3157
[2026-01-15 08:06:25] 2026-01-15 13:05:47,671 | INFO     | did not find any defunct processes belonging to 3157
[2026-01-15 08:06:25] 2026-01-15 13:05:47,672 | INFO     | ready for new job
[2026-01-15 08:06:25] 2026-01-15 13:05:47,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 08:06:25] 2026-01-15 13:05:47,673 | INFO     | ***************************************
[2026-01-15 08:06:25] 2026-01-15 13:05:47,673 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 08:06:25] 2026-01-15 13:05:47,673 | INFO     | ***************************************
[2026-01-15 08:06:25] 2026-01-15 13:05:47,674 | INFO     | 
[2026-01-15 08:06:25] 2026-01-15 13:05:47,674 | INFO     | architecture information:
[2026-01-15 08:06:25] 2026-01-15 13:05:47,675 | INFO     | executing command: cat /etc/os-release
[2026-01-15 08:06:25] 2026-01-15 13:05:47,688 | INFO     | cat /etc/os-release:
[2026-01-15 08:06:25] NAME="CentOS Linux"
[2026-01-15 08:06:25] VERSION="7 (Core)"
[2026-01-15 08:06:25] ID="centos"
[2026-01-15 08:06:25] ID_LIKE="rhel fedora"
[2026-01-15 08:06:25] VERSION_ID="7"
[2026-01-15 08:06:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 08:06:25] ANSI_COLOR="0;31"
[2026-01-15 08:06:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 08:06:25] HOME_URL="https://www.centos.org/"
[2026-01-15 08:06:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 08:06:25] 
[2026-01-15 08:06:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 08:06:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 08:06:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 08:06:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 08:06:25] 
[2026-01-15 08:06:25] 2026-01-15 13:05:47,689 | INFO     | ***************************************
[2026-01-15 08:06:25] 2026-01-15 13:05:48,191 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 08:06:25] 2026-01-15 13:05:48,207 | INFO     | sufficient remaining disk space (28633464832 B)
[2026-01-15 08:06:25] 2026-01-15 13:05:48,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 08:06:25] 2026-01-15 13:05:48,208 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 08:06:25] 2026-01-15 13:05:48,208 | INFO     | update_server=False
[2026-01-15 08:06:25] 2026-01-15 13:05:48,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 08:06:25] 2026-01-15 13:05:48,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 08:06:25] 2026-01-15 13:05:48,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:06:25] 2026-01-15 13:05:48,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:06:25] 2026-01-15 13:05:48,834 | INFO     | aborting loop
[2026-01-15 08:06:25] 2026-01-15 13:05:48,899 | INFO     | all payload control threads have been joined
[2026-01-15 08:06:25] 2026-01-15 13:05:49,102 | INFO     | all job control threads have been joined
[2026-01-15 08:06:25] 2026-01-15 13:05:49,106 | INFO     | all data control threads have been joined
[2026-01-15 08:06:25] 2026-01-15 13:05:49,213 | INFO     | [job] retrieve thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:49,214 | INFO     | [job] queue monitor thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:49,256 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:49,481 | INFO     | [data] copytool_in thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:49,737 | INFO     | [payload] validate_post thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:49,840 | INFO     | [job] job monitor thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:49,904 | INFO     | [payload] control thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:50,107 | INFO     | [job] control thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:50,112 | INFO     | [data] control thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:50,214 | INFO     | [data] copytool_out thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:50,234 | INFO     | [payload] failed_post thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:50,385 | INFO     | [job] validate thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:50,549 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:50,683 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:51,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 08:06:25] 2026-01-15 13:05:55,046 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:05:58,809 | INFO     | job.realtimelogging is not enabled
[2026-01-15 08:06:25] 2026-01-15 13:05:59,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 08:06:25] 2026-01-15 13:06:18,496 | INFO     | PID=29057 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 08:06:25] 2026-01-15 13:06:18,496 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 08:06:25] 2026-01-15 13:06:18,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 08:06:25] 2026-01-15 13:06:18,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 08:06:25] 2026-01-15 13:06:19,661 | INFO     | [monitor] cgroup control has ended
[2026-01-15 08:06:25] 2026-01-15 13:06:19,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241261360960)>', '<ExcThread(monitor, started 140240605931264)>']
[2026-01-15 08:06:25] 2026-01-15 13:06:20,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 08:06:25] 2026-01-15 13:06:20,507 | INFO     | [monitor] control thread has ended
[2026-01-15 08:06:25] 2026-01-15 13:06:24,793 | INFO     | all workflow threads have been joined
[2026-01-15 08:06:25] 2026-01-15 13:06:24,793 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 08:06:25] 2026-01-15 13:06:24,793 | INFO     | traces error code: 0
[2026-01-15 08:06:25] 2026-01-15 13:06:24,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 08:06:25] 2026-01-15 13:06:24,879 [wrapper] ==== pilot stdout END ====
[2026-01-15 08:06:25] 2026-01-15 13:06:24,883 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 08:06:25] 2026-01-15 13:06:24,887 [wrapper] pilotpid: 29057
[2026-01-15 08:06:25] 2026-01-15 13:06:24,890 [wrapper] Pilot exit status: 0
[2026-01-15 08:06:25] 2026-01-15 13:06:24,905 [wrapper] pandaids: 6970924139
[2026-01-15 08:06:25] 2026-01-15 13:06:24,946 [wrapper] cleanup supervisor_pilot 21877 29058
[2026-01-15 08:06:25] 2026-01-15 13:06:24,950 [wrapper] Test setup, not cleaning
[2026-01-15 08:06:25] 2026-01-15 13:06:24,954 [wrapper] apfmon messages muted
[2026-01-15 08:06:25] 2026-01-15 13:06:24,958 [wrapper] ==== wrapper stdout END ====
[2026-01-15 08:06:25] 2026-01-15 13:06:24,962 [wrapper] ==== wrapper stderr END ====
[2026-01-15 08:06:25]  *** Error codes and diagnostics ***
[2026-01-15 08:06:25]     "exeErrorCode": 0,
[2026-01-15 08:06:25]     "exeErrorDiag": "",
[2026-01-15 08:06:25]     "pilotErrorCode": 0,
[2026-01-15 08:06:25]     "pilotErrorDiag": "",
[2026-01-15 08:06:25]  *** Listing of results directory ***
[2026-01-15 08:06:25] total 737160
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 08:06:25] -rwx------ 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas       100 Jan 15 07:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 08:06:25] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 07:18 run_atlas
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas       105 Jan 15 07:18 job.xml
[2026-01-15 08:06:25] -rw-r--r-- 2 boincer umatlas 598786766 Jan 15 07:18 EVNT.32794306._001128.pool.root.1
[2026-01-15 08:06:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 07:18 start_atlas.sh
[2026-01-15 08:06:25] drwxrwx--x 2 boincer umatlas      4096 Jan 15 07:18 shared
[2026-01-15 08:06:25] -rw-r--r-- 2 boincer umatlas    592409 Jan 15 07:18 input.tar.gz
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas         0 Jan 15 07:18 boinc_lockfile
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 07:19 pandaJob.out
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas        57 Jan 15 07:19 setup.sh.local
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas   1004221 Jan 15 07:19 agis_schedconf.cvmfs.json
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas   1516246 Jan 15 07:19 agis_ddmendpoints.agis.ALL.json
[2026-01-15 08:06:25] drwx------ 5 boincer umatlas      4096 Jan 15 07:19 pilot3
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas      5953 Jan 15 08:00 init_data.xml
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas 150577666 Jan 15 08:05 HITS.48215263._051761.pool.root.1
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas       531 Jan 15 08:05 boinc_task_state.xml
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas      1045 Jan 15 08:05 memory_monitor_summary.json
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas    350005 Jan 15 08:05 log.48215263._051761.job.log.tgz.1
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas      7847 Jan 15 08:05 heartbeat.json
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 08:06 boinc_mmap_file
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas        27 Jan 15 08:06 wrapper_checkpoint.txt
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas        95 Jan 15 08:06 pilot_heartbeat.json
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas      4818 Jan 15 08:06 pilotlog.txt
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas    425112 Jan 15 08:06 log.48215263._051761.job.log.1
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas       357 Jan 15 08:06 output.list
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas       620 Jan 15 08:06 runtime_log
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas    798720 Jan 15 08:06 result.tar.gz
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas      9344 Jan 15 08:06 runtime_log.err
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas       659 Jan 15 08:06 LgBLDmb1X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBcoKDmg5EVDm.diag
[2026-01-15 08:06:25] -rw-r--r-- 1 boincer umatlas     21996 Jan 15 08:06 stderr.txt
[2026-01-15 08:06:25] HITS file was successfully produced:
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas 150577666 Jan 15 08:05 shared/HITS.pool.root.1
[2026-01-15 08:06:25]  *** Contents of shared directory: ***
[2026-01-15 08:06:25] total 733188
[2026-01-15 08:06:25] -rw-r--r-- 2 boincer umatlas 598786766 Jan 15 07:18 ATLAS.root_0
[2026-01-15 08:06:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 07:18 start_atlas.sh
[2026-01-15 08:06:25] -rw-r--r-- 2 boincer umatlas    592409 Jan 15 07:18 input.tar.gz
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas 150577666 Jan 15 08:05 HITS.pool.root.1
[2026-01-15 08:06:25] -rw------- 1 boincer umatlas    798720 Jan 15 08:06 result.tar.gz
08:06:26 (25313): run_atlas exited; CPU time 29524.378677
08:06:26 (25313): called boinc_finish(0)

</stderr_txt>
]]>

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