Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:02 (47422): wrapper (7.7.26015): starting
07:11:02 (47422): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 07:11:02] Arguments: --nthreads 8
[2026-01-15 07:11:02] Threads: 8
[2026-01-15 07:11:02] Checking for CVMFS
[2026-01-15 07:11:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 07:11:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 07:11:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 07:11:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 07:11:02] 2.11.2.0 27562 406050 311208 155168 1 188 15865470 18432000 2749 130560 7 733607417 99.364 1130176643 26006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-15 07:11:02] CVMFS is ok
[2026-01-15 07:11:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 07:11:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 07:11:02] Further information can be found at the LHC@home message board.
[2026-01-15 07:11:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 07:11:02] Checking for apptainer binary...
[2026-01-15 07:11:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 07:11:02] Running /usr/bin/apptainer --version
[2026-01-15 07:11:02] apptainer version 1.3.2-1.el7
[2026-01-15 07:11:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 07:11:03] c-9-30.aglt2.org
[2026-01-15 07:11:03] apptainer works
[2026-01-15 07:11:03] Set ATHENA_PROC_NUMBER=8
[2026-01-15 07:11:03] Set ATHENA_CORE_NUMBER=8
[2026-01-15 07:11:03] Starting ATLAS job with PandaID=6970569084
[2026-01-15 07:11:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 08:48:28]  *** The last 200 lines of the pilot log: ***
[2026-01-15 08:48:28]  status=None
[2026-01-15 08:48:28]  status_code=0
[2026-01-15 08:48:28]  storage_token=
[2026-01-15 08:48:28]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6970569084/log.48215263._051237.job.log.tgz.1
[2026-01-15 08:48:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/64/log.48215263._051237.job.log.tgz.1
[2026-01-15 08:48:28]  workdir=None
[2026-01-15 08:48:28] ]
[2026-01-15 08:48:28] 2026-01-15 13:47:38,669 | INFO     | transferring file log.48215263._051237.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6970569084/log.48215263._051237.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 08:48:28] 2026-01-15 13:47:38,669 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6970569084/log.48215263._051237.job.log.tgz.1 /tmp/boinchome/slots/2/log.48215263._051237.job
[2026-01-15 08:48:28] 2026-01-15 13:47:38,685 | INFO     | adding to output.list: log.48215263._051237.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/64/log.48215263._051237.job.log.tg
[2026-01-15 08:48:28] 2026-01-15 13:47:38,686 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 08:48:28] 2026-01-15 13:47:38,686 | INFO     | summary of transferred files:
[2026-01-15 08:48:28] 2026-01-15 13:47:38,687 | INFO     |  -- lfn=log.48215263._051237.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 08:48:28] 2026-01-15 13:47:38,687 | INFO     | stage-out finished correctly
[2026-01-15 08:48:28] 2026-01-15 13:47:39,792 | INFO     | monitor loop #415: job 0:6970569084 is in state 'finished'
[2026-01-15 08:48:28] 2026-01-15 13:47:39,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:48:28] 2026-01-15 13:47:39,942 | INFO     | time since job start (5785s) is within the limit (349056.0s)
[2026-01-15 08:48:28] 2026-01-15 13:47:41,949 | INFO     | time since job start (5787s) is within the limit (349056.0s)
[2026-01-15 08:48:28] 2026-01-15 13:47:42,295 | INFO     | monitor loop #416: job 0:6970569084 is in state 'finished'
[2026-01-15 08:48:28] 2026-01-15 13:47:42,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:48:28] 2026-01-15 13:47:42,319 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 08:48:28] 2026-01-15 13:47:43,956 | INFO     | time since job start (5789s) is within the limit (349056.0s)
[2026-01-15 08:48:28] 2026-01-15 13:47:43,956 | INFO     | 5792s have passed since pilot start - server update state is 'RUNNING'
[2026-01-15 08:48:28] 2026-01-15 13:47:44,798 | INFO     | monitor loop #417: job 0:6970569084 is in state 'finished'
[2026-01-15 08:48:28] 2026-01-15 13:47:44,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:48:28] 2026-01-15 13:47:45,426 | INFO     | job 6970569084 has state=finished
[2026-01-15 08:48:28] 2026-01-15 13:47:45,426 | INFO     | preparing for final server update for job 6970569084 in state='finished'
[2026-01-15 08:48:28] 2026-01-15 13:47:45,427 | INFO     | this job has now completed (state=finished)
[2026-01-15 08:48:28] 2026-01-15 13:47:45,427 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 08:48:28] 2026-01-15 13:47:45,427 | INFO     | log transfer has been attempted: DONE
[2026-01-15 08:48:28] 2026-01-15 13:47:45,427 | INFO     | job 6970569084 has finished - writing final server update
[2026-01-15 08:48:28] 2026-01-15 13:47:45,428 | INFO     | total number of processed events: 400 (read)
[2026-01-15 08:48:28] 2026-01-15 13:47:45,428 | INFO     | executing command: lscpu
[2026-01-15 08:48:28] 2026-01-15 13:47:45,463 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 08:48:28] 2026-01-15 13:47:45,962 | INFO     | time since job start (5791s) is within the limit (349056.0s)
[2026-01-15 08:48:28] 2026-01-15 13:47:47,301 | INFO     | monitor loop #418: job 0:6970569084 is in state 'finished'
[2026-01-15 08:48:28] 2026-01-15 13:47:47,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:48:28] 2026-01-15 13:47:47,968 | INFO     | time since job start (5793s) is within the limit (349056.0s)
[2026-01-15 08:48:28] 2026-01-15 13:47:48,897 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 08:48:28] 2026-01-15 13:47:48,904 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9020000000014
[2026-01-15 08:48:28] 2026-01-15 13:47:48,911 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6970569084/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 08:48:28] 2026-01-15 13:47:48,911 | INFO     | extracted standard info from prmon json
[2026-01-15 08:48:28] 2026-01-15 13:47:48,912 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 08:48:28] 2026-01-15 13:47:48,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 08:48:28] 2026-01-15 13:47:48,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 08:48:28] 2026-01-15 13:47:48,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 08:48:28] 2026-01-15 13:47:48,916 | INFO     | fitting pss+swap vs Time
[2026-01-15 08:48:28] 2026-01-15 13:47:48,916 | INFO     | sum of square deviations: 211285822.0
[2026-01-15 08:48:28] 2026-01-15 13:47:48,917 | INFO     | sum of deviations: 1553931720.4999995
[2026-01-15 08:48:28] 2026-01-15 13:47:48,917 | INFO     | mean x: 1768482058.5
[2026-01-15 08:48:28] 2026-01-15 13:47:48,917 | INFO     | mean y: 2517192.602272727
[2026-01-15 08:48:28] 2026-01-15 13:47:48,917 | INFO     | intersect: -13004036403.020845
[2026-01-15 08:48:28] 2026-01-15 13:47:48,918 | INFO     | chi2: 0.001877176096532039
[2026-01-15 08:48:28] 2026-01-15 13:47:48,918 | INFO     | current memory leak: 7.35 B/s (using 88 data points, chi2=0.00)
[2026-01-15 08:48:28] 2026-01-15 13:47:48,918 | INFO     | could have reported an average CPU frequency of 2999 MHz (7 samples)
[2026-01-15 08:48:28] 2026-01-15 13:47:48,918 | INFO     | ..............................
[2026-01-15 08:48:28] 2026-01-15 13:47:48,919 | INFO     | . Timing measurements:
[2026-01-15 08:48:28] 2026-01-15 13:47:48,919 | INFO     | . get job = 0 s
[2026-01-15 08:48:28] 2026-01-15 13:47:48,919 | INFO     | . initial setup = 2 s
[2026-01-15 08:48:28] 2026-01-15 13:47:48,919 | INFO     | . payload setup = 4 s
[2026-01-15 08:48:28] 2026-01-15 13:47:48,919 | INFO     | . stage-in = 0 s
[2026-01-15 08:48:28] 2026-01-15 13:47:48,919 | INFO     | . payload execution = 5758 s
[2026-01-15 08:48:28] 2026-01-15 13:47:48,920 | INFO     | . stage-out = 0 s
[2026-01-15 08:48:28] 2026-01-15 13:47:48,920 | INFO     | . log creation = 0 s
[2026-01-15 08:48:28] 2026-01-15 13:47:48,920 | INFO     | ..............................
[2026-01-15 08:48:28] 2026-01-15 13:47:49,066 | INFO     | 
[2026-01-15 08:48:28] 2026-01-15 13:47:49,066 | INFO     | job summary report
[2026-01-15 08:48:28] 2026-01-15 13:47:49,066 | INFO     | --------------------------------------------------
[2026-01-15 08:48:28] 2026-01-15 13:47:49,066 | INFO     | PanDA job id: 6970569084
[2026-01-15 08:48:28] 2026-01-15 13:47:49,067 | INFO     | task id: 48215263
[2026-01-15 08:48:28] 2026-01-15 13:47:49,067 | INFO     | errors: (none)
[2026-01-15 08:48:28] 2026-01-15 13:47:49,067 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 08:48:28] 2026-01-15 13:47:49,067 | INFO     | pilot state: finished 
[2026-01-15 08:48:28] 2026-01-15 13:47:49,067 | INFO     | transexitcode: 0
[2026-01-15 08:48:28] 2026-01-15 13:47:49,067 | INFO     | exeerrorcode: 0
[2026-01-15 08:48:28] 2026-01-15 13:47:49,068 | INFO     | exeerrordiag: 
[2026-01-15 08:48:28] 2026-01-15 13:47:49,068 | INFO     | exitcode: 0
[2026-01-15 08:48:28] 2026-01-15 13:47:49,068 | INFO     | exitmsg: OK
[2026-01-15 08:48:28] 2026-01-15 13:47:49,068 | INFO     | cpuconsumptiontime: 42944 s
[2026-01-15 08:48:28] 2026-01-15 13:47:49,068 | INFO     | nevents: 400
[2026-01-15 08:48:28] 2026-01-15 13:47:49,068 | INFO     | neventsw: 0
[2026-01-15 08:48:28] 2026-01-15 13:47:49,069 | INFO     | pid: 9991
[2026-01-15 08:48:28] 2026-01-15 13:47:49,069 | INFO     | pgrp: 9991
[2026-01-15 08:48:28] 2026-01-15 13:47:49,069 | INFO     | corecount: 8
[2026-01-15 08:48:28] 2026-01-15 13:47:49,069 | INFO     | event service: False
[2026-01-15 08:48:28] 2026-01-15 13:47:49,069 | INFO     | sizes: {0: 2283725, 1: 2283980, 5: 2284242, 12: 2284298, 5768: 2311049, 5769: 2320047, 5773: 2320231, 5780: 2320425}
[2026-01-15 08:48:28] 2026-01-15 13:47:49,069 | INFO     | --------------------------------------------------
[2026-01-15 08:48:28] 2026-01-15 13:47:49,069 | INFO     | 
[2026-01-15 08:48:28] 2026-01-15 13:47:49,070 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-15 08:48:28] 2026-01-15 13:47:49,096 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,096 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,096 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,096 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,099 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 08:48:28] 2026-01-15 13:47:49,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,099 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 08:48:28] 2026-01-15 13:47:49,099 | INFO     | job 6970569084 has completed (purged errors)
[2026-01-15 08:48:28] 2026-01-15 13:47:49,099 | INFO     | overall cleanup function is called
[2026-01-15 08:48:28] 2026-01-15 13:47:50,108 | INFO     | --- collectZombieJob: --- 10, [9991]
[2026-01-15 08:48:28] 2026-01-15 13:47:50,109 | INFO     | zombie collector waiting for pid 9991
[2026-01-15 08:48:28] 2026-01-15 13:47:50,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 08:48:28] 2026-01-15 13:47:50,109 | INFO     | collected zombie processes
[2026-01-15 08:48:28] 2026-01-15 13:47:50,109 | INFO     | will attempt to kill all subprocesses of pid=9991
[2026-01-15 08:48:28] 2026-01-15 13:47:50,391 | INFO     | process IDs to be killed: [9991] (in reverse order)
[2026-01-15 08:48:28] 2026-01-15 13:47:50,444 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 08:48:28] 2026-01-15 13:47:50,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 08:48:28] 2026-01-15 13:47:50,448 | INFO     | did not find any defunct processes belonging to 9991
[2026-01-15 08:48:28] 2026-01-15 13:47:50,452 | INFO     | did not find any defunct processes belonging to 9991
[2026-01-15 08:48:28] 2026-01-15 13:47:50,452 | INFO     | ready for new job
[2026-01-15 08:48:28] 2026-01-15 13:47:50,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 08:48:28] 2026-01-15 13:47:50,453 | INFO     | ***************************************
[2026-01-15 08:48:28] 2026-01-15 13:47:50,453 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 08:48:28] 2026-01-15 13:47:50,454 | INFO     | ***************************************
[2026-01-15 08:48:28] 2026-01-15 13:47:50,454 | INFO     | 
[2026-01-15 08:48:28] 2026-01-15 13:47:50,455 | INFO     | architecture information:
[2026-01-15 08:48:28] 2026-01-15 13:47:50,455 | INFO     | executing command: cat /etc/os-release
[2026-01-15 08:48:28] 2026-01-15 13:47:50,465 | INFO     | cat /etc/os-release:
[2026-01-15 08:48:28] NAME="CentOS Linux"
[2026-01-15 08:48:28] VERSION="7 (Core)"
[2026-01-15 08:48:28] ID="centos"
[2026-01-15 08:48:28] ID_LIKE="rhel fedora"
[2026-01-15 08:48:28] VERSION_ID="7"
[2026-01-15 08:48:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 08:48:28] ANSI_COLOR="0;31"
[2026-01-15 08:48:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 08:48:28] HOME_URL="https://www.centos.org/"
[2026-01-15 08:48:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 08:48:28] 
[2026-01-15 08:48:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 08:48:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 08:48:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 08:48:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 08:48:28] 
[2026-01-15 08:48:28] 2026-01-15 13:47:50,465 | INFO     | ***************************************
[2026-01-15 08:48:28] 2026-01-15 13:47:50,968 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-15 08:48:28] 2026-01-15 13:47:50,989 | INFO     | sufficient remaining disk space (102130253824 B)
[2026-01-15 08:48:28] 2026-01-15 13:47:50,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 08:48:28] 2026-01-15 13:47:50,990 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 08:48:28] 2026-01-15 13:47:50,990 | INFO     | update_server=False
[2026-01-15 08:48:28] 2026-01-15 13:47:50,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 08:48:28] 2026-01-15 13:47:50,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:48:28] 2026-01-15 13:47:50,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:48:28] 2026-01-15 13:47:50,991 | INFO     | aborting loop
[2026-01-15 08:48:28] 2026-01-15 13:47:51,177 | INFO     | all payload control threads have been joined
[2026-01-15 08:48:28] 2026-01-15 13:47:51,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 08:48:28] 2026-01-15 13:47:51,944 | INFO     | all data control threads have been joined
[2026-01-15 08:48:28] 2026-01-15 13:47:51,997 | INFO     | [job] retrieve thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:51,997 | INFO     | [job] queue monitor thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:51,998 | INFO     | [job] job monitor thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:52,020 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:52,040 | INFO     | all job control threads have been joined
[2026-01-15 08:48:28] 2026-01-15 13:47:52,184 | INFO     | [payload] control thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:52,325 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:52,600 | INFO     | [payload] validate_post thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:52,905 | INFO     | [data] copytool_in thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:52,950 | INFO     | [data] control thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:52,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 08:48:28] 2026-01-15 13:47:53,031 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:53,045 | INFO     | [job] control thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:53,099 | INFO     | [job] validate thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:53,346 | INFO     | [payload] failed_post thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:53,366 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:53,858 | INFO     | [data] copytool_out thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:47:56,983 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 08:48:28] 2026-01-15 13:48:21,258 | INFO     | PID=2381 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-15 08:48:28] 2026-01-15 13:48:21,258 | INFO     | .. there are 4 such processes running
[2026-01-15 08:48:28] 2026-01-15 13:48:21,259 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 08:48:28] 2026-01-15 13:48:21,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 08:48:28] 2026-01-15 13:48:21,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 08:48:28] 2026-01-15 13:48:23,230 | INFO     | [monitor] cgroup control has ended
[2026-01-15 08:48:28] 2026-01-15 13:48:23,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777412384576)>', '<ExcThread(monitor, started 139777118545664)>']
[2026-01-15 08:48:28] 2026-01-15 13:48:23,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 08:48:28] 2026-01-15 13:48:23,271 | INFO     | [monitor] control thread has ended
[2026-01-15 08:48:28] 2026-01-15 13:48:28,261 | INFO     | all workflow threads have been joined
[2026-01-15 08:48:28] 2026-01-15 13:48:28,262 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 08:48:28] 2026-01-15 13:48:28,262 | INFO     | traces error code: 0
[2026-01-15 08:48:28] 2026-01-15 13:48:28,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 08:48:28] 2026-01-15 13:48:28,437 [wrapper] ==== pilot stdout END ====
[2026-01-15 08:48:28] 2026-01-15 13:48:28,440 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 08:48:28] 2026-01-15 13:48:28,443 [wrapper] pilotpid: 2381
[2026-01-15 08:48:28] 2026-01-15 13:48:28,445 [wrapper] Pilot exit status: 0
[2026-01-15 08:48:28] 2026-01-15 13:48:28,456 [wrapper] pandaids: 6970569084
[2026-01-15 08:48:28] 2026-01-15 13:48:28,511 [wrapper] cleanup supervisor_pilot 41481 2382
[2026-01-15 08:48:28] 2026-01-15 13:48:28,513 [wrapper] Test setup, not cleaning
[2026-01-15 08:48:28] 2026-01-15 13:48:28,516 [wrapper] apfmon messages muted
[2026-01-15 08:48:28] 2026-01-15 13:48:28,518 [wrapper] ==== wrapper stdout END ====
[2026-01-15 08:48:28] 2026-01-15 13:48:28,520 [wrapper] ==== wrapper stderr END ====
[2026-01-15 08:48:28]  *** Error codes and diagnostics ***
[2026-01-15 08:48:28]     "exeErrorCode": 0,
[2026-01-15 08:48:28]     "exeErrorDiag": "",
[2026-01-15 08:48:28]     "pilotErrorCode": 0,
[2026-01-15 08:48:28]     "pilotErrorDiag": "",
[2026-01-15 08:48:28]  *** Listing of results directory ***
[2026-01-15 08:48:28] total 733536
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 08:48:28] -rwx------ 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas       100 Jan 15 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 08:48:28] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 07:11 run_atlas
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas       105 Jan 15 07:11 job.xml
[2026-01-15 08:48:28] -rw-r--r-- 2 boincer umatlas 594560090 Jan 15 07:11 EVNT.32794306._001991.pool.root.1
[2026-01-15 08:48:28] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 07:11 start_atlas.sh
[2026-01-15 08:48:28] drwxrwx--x 2 boincer umatlas      4096 Jan 15 07:11 shared
[2026-01-15 08:48:28] -rw-r--r-- 2 boincer umatlas    592405 Jan 15 07:11 input.tar.gz
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas         0 Jan 15 07:11 boinc_lockfile
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 07:11 pandaJob.out
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas        57 Jan 15 07:11 setup.sh.local
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas   1004126 Jan 15 07:11 agis_schedconf.cvmfs.json
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas   1516246 Jan 15 07:11 agis_ddmendpoints.agis.ALL.json
[2026-01-15 08:48:28] drwx------ 5 boincer umatlas      4096 Jan 15 07:11 pilot3
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas      6034 Jan 15 08:45 init_data.xml
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas 150306468 Jan 15 08:47 HITS.48215263._051237.pool.root.1
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas       530 Jan 15 08:47 boinc_task_state.xml
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas      1048 Jan 15 08:47 memory_monitor_summary.json
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas    340676 Jan 15 08:47 log.48215263._051237.job.log.tgz.1
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas        95 Jan 15 08:47 pilot_heartbeat.json
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas      7829 Jan 15 08:47 heartbeat.json
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 08:48 boinc_mmap_file
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas        27 Jan 15 08:48 wrapper_checkpoint.txt
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas      4821 Jan 15 08:48 pilotlog.txt
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas    827513 Jan 15 08:48 log.48215263._051237.job.log.1
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas       357 Jan 15 08:48 output.list
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas       620 Jan 15 08:48 runtime_log
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas   1187840 Jan 15 08:48 result.tar.gz
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas       656 Jan 15 08:48 XRPMDmN1X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCmuKDm9tlXWm.diag
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas      9332 Jan 15 08:48 runtime_log.err
[2026-01-15 08:48:28] -rw-r--r-- 1 boincer umatlas     22074 Jan 15 08:48 stderr.txt
[2026-01-15 08:48:28] HITS file was successfully produced:
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas 150306468 Jan 15 08:47 shared/HITS.pool.root.1
[2026-01-15 08:48:28]  *** Contents of shared directory: ***
[2026-01-15 08:48:28] total 729176
[2026-01-15 08:48:28] -rw-r--r-- 2 boincer umatlas 594560090 Jan 15 07:11 ATLAS.root_0
[2026-01-15 08:48:28] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 07:11 start_atlas.sh
[2026-01-15 08:48:28] -rw-r--r-- 2 boincer umatlas    592405 Jan 15 07:11 input.tar.gz
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas 150306468 Jan 15 08:47 HITS.pool.root.1
[2026-01-15 08:48:28] -rw------- 1 boincer umatlas   1187840 Jan 15 08:48 result.tar.gz
08:48:29 (47422): run_atlas exited; CPU time 43073.871350
08:48:29 (47422): called boinc_finish(0)

</stderr_txt>
]]>

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