Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:00:42 (11325): wrapper (7.7.26015): starting
07:00:42 (11325): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 07:00:42] Arguments: --nthreads 8
[2026-01-15 07:00:42] Threads: 8
[2026-01-15 07:00:42] Checking for CVMFS
[2026-01-15 07:00:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 07:00:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 07:00:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 07:00:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 07:00:42] 2.11.2.0 5808 242344 109768 155168 3 57 15973606 18432001 2749 130560 0 173818694 99.958 12074682 8155 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-15 07:00:42] CVMFS is ok
[2026-01-15 07:00:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 07:00:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 07:00:42] Further information can be found at the LHC@home message board.
[2026-01-15 07:00:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 07:00:42] Checking for apptainer binary...
[2026-01-15 07:00:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 07:00:42] Running /usr/bin/apptainer --version
[2026-01-15 07:00:42] apptainer version 1.3.2-1.el7
[2026-01-15 07:00:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 07:00:43] c-9-34.aglt2.org
[2026-01-15 07:00:43] apptainer works
[2026-01-15 07:00:43] Set ATHENA_PROC_NUMBER=8
[2026-01-15 07:00:43] Set ATHENA_CORE_NUMBER=8
[2026-01-15 07:00:43] Starting ATLAS job with PandaID=6970538581
[2026-01-15 07:00:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 08:44:09]  *** The last 200 lines of the pilot log: ***
[2026-01-15 08:44:09] 2026-01-15 13:43:12,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 08:44:09] 2026-01-15 13:43:13,368 | INFO     | time since job start (6139s) is within the limit (349056.0s)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,041 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 08:44:09] 2026-01-15 13:43:15,046 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9168750000013
[2026-01-15 08:44:09] 2026-01-15 13:43:15,049 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6970538581/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,050 | INFO     | extracted standard info from prmon json
[2026-01-15 08:44:09] 2026-01-15 13:43:15,050 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 08:44:09] 2026-01-15 13:43:15,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 08:44:09] 2026-01-15 13:43:15,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 08:44:09] 2026-01-15 13:43:15,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 08:44:09] 2026-01-15 13:43:15,052 | INFO     | fitting pss+swap vs Time
[2026-01-15 08:44:09] 2026-01-15 13:43:15,052 | INFO     | sum of square deviations: 319447850.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,053 | INFO     | sum of deviations: 4823183075.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,053 | INFO     | mean x: 1768481530.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,053 | INFO     | mean y: 2469930.594059406
[2026-01-15 08:44:09] 2026-01-15 13:43:15,053 | INFO     | intersect: -26698946854.48089
[2026-01-15 08:44:09] 2026-01-15 13:43:15,053 | INFO     | chi2: 2.105329161065552
[2026-01-15 08:44:09] 2026-01-15 13:43:15,053 | INFO     | sum of square deviations: 274312120.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,054 | INFO     | sum of deviations: 11033059538.5
[2026-01-15 08:44:09] 2026-01-15 13:43:15,054 | INFO     | mean x: 1768481377.5
[2026-01-15 08:44:09] 2026-01-15 13:43:15,054 | INFO     | mean y: 2490002.84375
[2026-01-15 08:44:09] 2026-01-15 13:43:15,054 | INFO     | intersect: -71127288479.73294
[2026-01-15 08:44:09] 2026-01-15 13:43:15,054 | INFO     | chi2: 1.3346260784210076
[2026-01-15 08:44:09] 2026-01-15 13:43:15,054 | INFO     | current chi2=1.3346260784210076 (change=36.60724873323253 %)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,055 | INFO     | sum of square deviations: 233641590.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,055 | INFO     | sum of deviations: 10392184174.999998
[2026-01-15 08:44:09] 2026-01-15 13:43:15,055 | INFO     | mean x: 1768481225.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,055 | INFO     | mean y: 2487597.5054945056
[2026-01-15 08:44:09] 2026-01-15 13:43:15,055 | INFO     | intersect: -78658090770.5394
[2026-01-15 08:44:09] 2026-01-15 13:43:15,055 | INFO     | chi2: 1.3378624485622543
[2026-01-15 08:44:09] 2026-01-15 13:43:15,055 | INFO     | current chi2=1.3378624485622543 (change=-0.24249264970722895 %)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,056 | INFO     | right removable region: 90
[2026-01-15 08:44:09] 2026-01-15 13:43:15,056 | INFO     | sum of square deviations: 274312120.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,056 | INFO     | sum of deviations: -8254758449.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,056 | INFO     | mean x: 1768481682.5
[2026-01-15 08:44:09] 2026-01-15 13:43:15,056 | INFO     | mean y: 2512976.1875
[2026-01-15 08:44:09] 2026-01-15 13:43:15,056 | INFO     | intersect: 53220683250.6858
[2026-01-15 08:44:09] 2026-01-15 13:43:15,057 | INFO     | chi2: 0.8464495431691776
[2026-01-15 08:44:09] 2026-01-15 13:43:15,057 | INFO     | current chi2=0.8464495431691776 (change=59.79490718967805 %)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,057 | INFO     | sum of square deviations: 233641590.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,057 | INFO     | sum of deviations: -5866325592.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,057 | INFO     | mean x: 1768481835.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,057 | INFO     | mean y: 2503852.054945055
[2026-01-15 08:44:09] 2026-01-15 13:43:15,057 | INFO     | intersect: 44405943529.24436
[2026-01-15 08:44:09] 2026-01-15 13:43:15,058 | INFO     | chi2: 0.8219732563512576
[2026-01-15 08:44:09] 2026-01-15 13:43:15,058 | INFO     | current chi2=0.8219732563512576 (change=2.8916415651048455 %)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,058 | INFO     | left removable region: 20
[2026-01-15 08:44:09] 2026-01-15 13:43:15,058 | INFO     | sum of square deviations: 106336877.5
[2026-01-15 08:44:09] 2026-01-15 13:43:15,058 | INFO     | sum of deviations: 401304055.0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,058 | INFO     | mean x: 1768481804.5
[2026-01-15 08:44:09] 2026-01-15 13:43:15,058 | INFO     | mean y: 2526656.8857142855
[2026-01-15 08:44:09] 2026-01-15 13:43:15,059 | INFO     | intersect: -6671535399.709537
[2026-01-15 08:44:09] 2026-01-15 13:43:15,059 | INFO     | chi2: 0.0002155312481833819
[2026-01-15 08:44:09] 2026-01-15 13:43:15,059 | INFO     | current memory leak: 3.77 B/s (using 70 data points, chi2=0.00)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,059 | INFO     | could have reported an average CPU frequency of 2999 MHz (7 samples)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,059 | INFO     | ..............................
[2026-01-15 08:44:09] 2026-01-15 13:43:15,059 | INFO     | . Timing measurements:
[2026-01-15 08:44:09] 2026-01-15 13:43:15,059 | INFO     | . get job = 0 s
[2026-01-15 08:44:09] 2026-01-15 13:43:15,059 | INFO     | . initial setup = 2 s
[2026-01-15 08:44:09] 2026-01-15 13:43:15,060 | INFO     | . payload setup = 4 s
[2026-01-15 08:44:09] 2026-01-15 13:43:15,060 | INFO     | . stage-in = 0 s
[2026-01-15 08:44:09] 2026-01-15 13:43:15,060 | INFO     | . payload execution = 6109 s
[2026-01-15 08:44:09] 2026-01-15 13:43:15,060 | INFO     | . stage-out = 0 s
[2026-01-15 08:44:09] 2026-01-15 13:43:15,060 | INFO     | . log creation = 0 s
[2026-01-15 08:44:09] 2026-01-15 13:43:15,060 | INFO     | ..............................
[2026-01-15 08:44:09] 2026-01-15 13:43:15,373 | INFO     | time since job start (6141s) is within the limit (349056.0s)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,434 | INFO     | 
[2026-01-15 08:44:09] 2026-01-15 13:43:15,434 | INFO     | job summary report
[2026-01-15 08:44:09] 2026-01-15 13:43:15,434 | INFO     | --------------------------------------------------
[2026-01-15 08:44:09] 2026-01-15 13:43:15,435 | INFO     | PanDA job id: 6970538581
[2026-01-15 08:44:09] 2026-01-15 13:43:15,435 | INFO     | task id: 48215263
[2026-01-15 08:44:09] 2026-01-15 13:43:15,435 | INFO     | errors: (none)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,435 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 08:44:09] 2026-01-15 13:43:15,435 | INFO     | pilot state: finished 
[2026-01-15 08:44:09] 2026-01-15 13:43:15,435 | INFO     | transexitcode: 0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,435 | INFO     | exeerrorcode: 0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,436 | INFO     | exeerrordiag: 
[2026-01-15 08:44:09] 2026-01-15 13:43:15,436 | INFO     | exitcode: 0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,436 | INFO     | exitmsg: OK
[2026-01-15 08:44:09] 2026-01-15 13:43:15,436 | INFO     | cpuconsumptiontime: 45286 s
[2026-01-15 08:44:09] 2026-01-15 13:43:15,436 | INFO     | nevents: 400
[2026-01-15 08:44:09] 2026-01-15 13:43:15,436 | INFO     | neventsw: 0
[2026-01-15 08:44:09] 2026-01-15 13:43:15,436 | INFO     | pid: 21559
[2026-01-15 08:44:09] 2026-01-15 13:43:15,437 | INFO     | pgrp: 21559
[2026-01-15 08:44:09] 2026-01-15 13:43:15,437 | INFO     | corecount: 8
[2026-01-15 08:44:09] 2026-01-15 13:43:15,437 | INFO     | event service: False
[2026-01-15 08:44:09] 2026-01-15 13:43:15,437 | INFO     | sizes: {0: 2283124, 1: 2283980, 2: 2283980, 5: 2284270, 13: 2284326, 6118: 2311020, 6119: 2311147, 6120: 2320201, 6121: 2320257, 6125: 2320451}
[2026-01-15 08:44:09] 2026-01-15 13:43:15,437 | INFO     | --------------------------------------------------
[2026-01-15 08:44:09] 2026-01-15 13:43:15,437 | INFO     | 
[2026-01-15 08:44:09] 2026-01-15 13:43:15,438 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-15 08:44:09] 2026-01-15 13:43:15,465 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,465 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,466 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,466 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,468 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,468 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 08:44:09] 2026-01-15 13:43:15,469 | INFO     | job 6970538581 has completed (purged errors)
[2026-01-15 08:44:09] 2026-01-15 13:43:15,469 | INFO     | overall cleanup function is called
[2026-01-15 08:44:09] 2026-01-15 13:43:16,476 | INFO     | --- collectZombieJob: --- 10, [21559]
[2026-01-15 08:44:09] 2026-01-15 13:43:16,476 | INFO     | zombie collector waiting for pid 21559
[2026-01-15 08:44:09] 2026-01-15 13:43:16,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 08:44:09] 2026-01-15 13:43:16,476 | INFO     | collected zombie processes
[2026-01-15 08:44:09] 2026-01-15 13:43:16,476 | INFO     | will attempt to kill all subprocesses of pid=21559
[2026-01-15 08:44:09] 2026-01-15 13:43:16,632 | INFO     | process IDs to be killed: [21559] (in reverse order)
[2026-01-15 08:44:09] 2026-01-15 13:43:16,711 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 08:44:09] 2026-01-15 13:43:16,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 08:44:09] 2026-01-15 13:43:16,719 | INFO     | did not find any defunct processes belonging to 21559
[2026-01-15 08:44:09] 2026-01-15 13:43:16,726 | INFO     | did not find any defunct processes belonging to 21559
[2026-01-15 08:44:09] 2026-01-15 13:43:16,726 | INFO     | ready for new job
[2026-01-15 08:44:09] 2026-01-15 13:43:16,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 08:44:09] 2026-01-15 13:43:16,728 | INFO     | ***************************************
[2026-01-15 08:44:09] 2026-01-15 13:43:16,728 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 08:44:09] 2026-01-15 13:43:16,728 | INFO     | ***************************************
[2026-01-15 08:44:09] 2026-01-15 13:43:16,728 | INFO     | 
[2026-01-15 08:44:09] 2026-01-15 13:43:16,730 | INFO     | architecture information:
[2026-01-15 08:44:09] 2026-01-15 13:43:16,730 | INFO     | executing command: cat /etc/os-release
[2026-01-15 08:44:09] 2026-01-15 13:43:16,742 | INFO     | cat /etc/os-release:
[2026-01-15 08:44:09] NAME="CentOS Linux"
[2026-01-15 08:44:09] VERSION="7 (Core)"
[2026-01-15 08:44:09] ID="centos"
[2026-01-15 08:44:09] ID_LIKE="rhel fedora"
[2026-01-15 08:44:09] VERSION_ID="7"
[2026-01-15 08:44:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 08:44:09] ANSI_COLOR="0;31"
[2026-01-15 08:44:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 08:44:09] HOME_URL="https://www.centos.org/"
[2026-01-15 08:44:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 08:44:09] 
[2026-01-15 08:44:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 08:44:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 08:44:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 08:44:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 08:44:09] 
[2026-01-15 08:44:09] 2026-01-15 13:43:16,742 | INFO     | ***************************************
[2026-01-15 08:44:09] 2026-01-15 13:43:17,245 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-15 08:44:09] 2026-01-15 13:43:17,267 | INFO     | sufficient remaining disk space (102009667584 B)
[2026-01-15 08:44:09] 2026-01-15 13:43:17,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 08:44:09] 2026-01-15 13:43:17,268 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 08:44:09] 2026-01-15 13:43:17,268 | INFO     | update_server=False
[2026-01-15 08:44:09] 2026-01-15 13:43:17,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 08:44:09] 2026-01-15 13:43:17,269 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:44:09] 2026-01-15 13:43:17,269 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-15 08:44:09] 2026-01-15 13:43:17,269 | INFO     | aborting loop
[2026-01-15 08:44:09] 2026-01-15 13:43:17,269 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 08:44:09] 2026-01-15 13:43:17,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 08:44:09] 2026-01-15 13:43:17,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 08:44:09] 2026-01-15 13:43:17,387 | INFO     | all job control threads have been joined
[2026-01-15 08:44:09] 2026-01-15 13:43:17,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 08:44:09] 2026-01-15 13:43:17,857 | INFO     | all data control threads have been joined
[2026-01-15 08:44:09] 2026-01-15 13:43:17,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 08:44:09] 2026-01-15 13:43:18,274 | INFO     | [job] retrieve thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:18,275 | INFO     | [job] job monitor thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:18,383 | INFO     | all payload control threads have been joined
[2026-01-15 08:44:09] 2026-01-15 13:43:18,393 | INFO     | [job] control thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:18,405 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:18,862 | INFO     | [data] control thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:18,870 | INFO     | [data] copytool_in thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:19,162 | INFO     | [payload] failed_post thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:19,249 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:19,256 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:19,389 | INFO     | [payload] control thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:19,479 | INFO     | [payload] validate_post thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:19,591 | INFO     | [job] validate thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:19,758 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:19,902 | INFO     | [data] copytool_out thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:20,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 08:44:09] 2026-01-15 13:43:21,210 | INFO     | [job] queue monitor thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:43:21,532 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 08:44:09] 2026-01-15 13:44:04,150 | INFO     | [monitor] cgroup control has ended
[2026-01-15 08:44:09] 2026-01-15 13:44:04,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086599452480)>', '<ExcThread(monitor, started 140086280689408)>']
[2026-01-15 08:44:09] 2026-01-15 13:44:04,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 08:44:09] 2026-01-15 13:44:04,516 | INFO     | [monitor] control thread has ended
[2026-01-15 08:44:09] 2026-01-15 13:44:09,459 | INFO     | all workflow threads have been joined
[2026-01-15 08:44:09] 2026-01-15 13:44:09,459 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 08:44:09] 2026-01-15 13:44:09,460 | INFO     | traces error code: 0
[2026-01-15 08:44:09] 2026-01-15 13:44:09,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 08:44:09] 2026-01-15 13:44:09,579 [wrapper] ==== pilot stdout END ====
[2026-01-15 08:44:09] 2026-01-15 13:44:09,582 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 08:44:09] 2026-01-15 13:44:09,586 [wrapper] pilotpid: 15009
[2026-01-15 08:44:09] 2026-01-15 13:44:09,589 [wrapper] Pilot exit status: 0
[2026-01-15 08:44:09] 2026-01-15 13:44:09,597 [wrapper] pandaids: 6970538581
[2026-01-15 08:44:09] 2026-01-15 13:44:09,644 [wrapper] cleanup supervisor_pilot 26561 15010
[2026-01-15 08:44:09] 2026-01-15 13:44:09,647 [wrapper] Test setup, not cleaning
[2026-01-15 08:44:09] 2026-01-15 13:44:09,650 [wrapper] apfmon messages muted
[2026-01-15 08:44:09] 2026-01-15 13:44:09,652 [wrapper] ==== wrapper stdout END ====
[2026-01-15 08:44:09] 2026-01-15 13:44:09,654 [wrapper] ==== wrapper stderr END ====
[2026-01-15 08:44:09]  *** Error codes and diagnostics ***
[2026-01-15 08:44:09]     "exeErrorCode": 0,
[2026-01-15 08:44:09]     "exeErrorDiag": "",
[2026-01-15 08:44:09]     "pilotErrorCode": 0,
[2026-01-15 08:44:09]     "pilotErrorDiag": "",
[2026-01-15 08:44:09]  *** Listing of results directory ***
[2026-01-15 08:44:09] total 734748
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 08:44:09] -rwx------ 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 03:38 queuedata.json
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas       100 Jan 15 07:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 08:44:09] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 07:00 run_atlas
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas       105 Jan 15 07:00 job.xml
[2026-01-15 08:44:09] -rw-r--r-- 2 boincer umatlas 594618713 Jan 15 07:00 EVNT.32794306._001967.pool.root.1
[2026-01-15 08:44:09] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 07:00 start_atlas.sh
[2026-01-15 08:44:09] drwxrwx--x 2 boincer umatlas      4096 Jan 15 07:00 shared
[2026-01-15 08:44:09] -rw-r--r-- 2 boincer umatlas    592400 Jan 15 07:00 input.tar.gz
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas         0 Jan 15 07:00 boinc_lockfile
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 07:00 pandaJob.out
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas        57 Jan 15 07:00 setup.sh.local
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas   1004126 Jan 15 07:00 agis_schedconf.cvmfs.json
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas   1516246 Jan 15 07:00 agis_ddmendpoints.agis.ALL.json
[2026-01-15 08:44:09] drwx------ 5 boincer umatlas      4096 Jan 15 07:00 pilot3
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas      6035 Jan 15 08:38 init_data.xml
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas       531 Jan 15 08:42 boinc_task_state.xml
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas 151373396 Jan 15 08:42 HITS.48215263._050667.pool.root.1
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas        95 Jan 15 08:42 pilot_heartbeat.json
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas      1049 Jan 15 08:43 memory_monitor_summary.json
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas    354084 Jan 15 08:43 log.48215263._050667.job.log.tgz.1
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas      7828 Jan 15 08:43 heartbeat.json
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 08:43 boinc_mmap_file
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas        27 Jan 15 08:43 wrapper_checkpoint.txt
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas      4553 Jan 15 08:44 pilotlog.txt
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas    871239 Jan 15 08:44 log.48215263._050667.job.log.1
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas       357 Jan 15 08:44 output.list
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas       620 Jan 15 08:44 runtime_log
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas   1249280 Jan 15 08:44 result.tar.gz
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas      9332 Jan 15 08:44 runtime_log.err
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas       656 Jan 15 08:44 jUiLDm00X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiWoKDmwij4xn.diag
[2026-01-15 08:44:09] -rw-r--r-- 1 boincer umatlas     21024 Jan 15 08:44 stderr.txt
[2026-01-15 08:44:09] HITS file was successfully produced:
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas 151373396 Jan 15 08:42 shared/HITS.pool.root.1
[2026-01-15 08:44:09]  *** Contents of shared directory: ***
[2026-01-15 08:44:09] total 730336
[2026-01-15 08:44:09] -rw-r--r-- 2 boincer umatlas 594618713 Jan 15 07:00 ATLAS.root_0
[2026-01-15 08:44:09] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 07:00 start_atlas.sh
[2026-01-15 08:44:09] -rw-r--r-- 2 boincer umatlas    592400 Jan 15 07:00 input.tar.gz
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas 151373396 Jan 15 08:42 HITS.pool.root.1
[2026-01-15 08:44:09] -rw------- 1 boincer umatlas   1249280 Jan 15 08:44 result.tar.gz
08:44:11 (11325): run_atlas exited; CPU time 45401.164468
08:44:11 (11325): called boinc_finish(0)

</stderr_txt>
]]>

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