Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:34:43 (1072493): wrapper (7.7.26015): starting
14:34:43 (1072493): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 14:34:43] Arguments: --nthreads 12
[2026-01-16 14:34:43] Threads: 12
[2026-01-16 14:34:43] Checking for CVMFS
[2026-01-16 14:34:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 14:34:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 14:34:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 14:34:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 14:34:44] 2.13.3.0 40677 10602 74596 155210 1 236 4044115 4096000 18074 130560 0 86797379 99.982 1157591 229 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 14:34:44] CVMFS is ok
[2026-01-16 14:34:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 14:34:44] Checking for apptainer binary...
[2026-01-16 14:34:44] apptainer is not installed, using version from CVMFS
[2026-01-16 14:34:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 14:34:46] epyc7v12
[2026-01-16 14:34:46] apptainer works
[2026-01-16 14:34:46] Set ATHENA_PROC_NUMBER=12
[2026-01-16 14:34:46] Set ATHENA_CORE_NUMBER=12
[2026-01-16 14:34:46] Starting ATLAS job with PandaID=6970537474
[2026-01-16 14:34:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31423/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 16:04:31]  *** The last 200 lines of the pilot log: ***
[2026-01-16 16:04:31] 2026-01-16 16:03:28,381 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-16 16:04:31] 2026-01-16 16:03:28,381 | INFO     | summary of transferred files:
[2026-01-16 16:04:31] 2026-01-16 16:03:28,381 | INFO     |  -- lfn=log.48215263._050273.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 16:04:31] 2026-01-16 16:03:28,381 | INFO     | stage-out finished correctly
[2026-01-16 16:04:31] 2026-01-16 16:03:29,073 | INFO     | time since job start (5293s) is within the limit (349056.0s)
[2026-01-16 16:04:31] 2026-01-16 16:03:29,339 | INFO     | number of running child processes to parent process 1105281: 1
[2026-01-16 16:04:31] 2026-01-16 16:03:29,340 | INFO     | maximum number of monitored processes: 6
[2026-01-16 16:04:31] 2026-01-16 16:03:31,086 | INFO     | time since job start (5295s) is within the limit (349056.0s)
[2026-01-16 16:04:31] 2026-01-16 16:03:31,350 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 16:04:31] 2026-01-16 16:03:31,847 | INFO     | monitor loop #347: job 0:6970537474 is in state 'finished'
[2026-01-16 16:04:31] 2026-01-16 16:03:31,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:04:31] 2026-01-16 16:03:32,348 | INFO     | job 6970537474 has state=finished
[2026-01-16 16:04:31] 2026-01-16 16:03:32,349 | INFO     | preparing for final server update for job 6970537474 in state='finished'
[2026-01-16 16:04:31] 2026-01-16 16:03:32,349 | INFO     | this job has now completed (state=finished)
[2026-01-16 16:04:31] 2026-01-16 16:03:32,349 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 16:04:31] 2026-01-16 16:03:32,349 | INFO     | log transfer has been attempted: DONE
[2026-01-16 16:04:31] 2026-01-16 16:03:32,349 | INFO     | job 6970537474 has finished - writing final server update
[2026-01-16 16:04:31] 2026-01-16 16:03:32,350 | INFO     | total number of processed events: 400 (read)
[2026-01-16 16:04:31] 2026-01-16 16:03:32,350 | INFO     | executing command: lscpu
[2026-01-16 16:04:31] 2026-01-16 16:03:32,524 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 16:04:31] 2026-01-16 16:03:33,662 | INFO     | PID=1081610 has CPU usage=20.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 16:04:31] 2026-01-16 16:03:33,668 | INFO     | .. there are 22 such processes running
[2026-01-16 16:04:31] 2026-01-16 16:03:34,350 | INFO     | monitor loop #348: job 0:6970537474 is in state 'finished'
[2026-01-16 16:04:31] 2026-01-16 16:03:34,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:04:31] 2026-01-16 16:03:34,669 | INFO     | time since job start (5298s) is within the limit (349056.0s)
[2026-01-16 16:04:31] 2026-01-16 16:03:36,674 | INFO     | time since job start (5300s) is within the limit (349056.0s)
[2026-01-16 16:04:31] 2026-01-16 16:03:36,855 | INFO     | monitor loop #349: job 0:6970537474 is in state 'finished'
[2026-01-16 16:04:31] 2026-01-16 16:03:36,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:04:31] 2026-01-16 16:03:38,679 | INFO     | time since job start (5302s) is within the limit (349056.0s)
[2026-01-16 16:04:31] 2026-01-16 16:03:39,358 | INFO     | monitor loop #350: job 0:6970537474 is in state 'finished'
[2026-01-16 16:04:31] 2026-01-16 16:03:39,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:04:31] 2026-01-16 16:03:40,684 | INFO     | time since job start (5304s) is within the limit (349056.0s)
[2026-01-16 16:04:31] 2026-01-16 16:03:41,861 | INFO     | monitor loop #351: job 0:6970537474 is in state 'finished'
[2026-01-16 16:04:31] 2026-01-16 16:03:41,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:04:31] 2026-01-16 16:03:42,694 | INFO     | time since job start (5306s) is within the limit (349056.0s)
[2026-01-16 16:04:31] 2026-01-16 16:03:44,370 | INFO     | monitor loop #352: job 0:6970537474 is in state 'finished'
[2026-01-16 16:04:31] 2026-01-16 16:03:44,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:04:31] 2026-01-16 16:03:44,699 | INFO     | time since job start (5308s) is within the limit (349056.0s)
[2026-01-16 16:04:31] 2026-01-16 16:03:45,892 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 16:04:31] 2026-01-16 16:03:45,940 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2401.6743203125
[2026-01-16 16:04:31] 2026-01-16 16:03:45,996 | INFO     | using path: /opt/boinc/instance_homes/boinc_31423/slots/0/PanDA_Pilot-6970537474/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 16:04:31] 2026-01-16 16:03:45,998 | INFO     | extracted standard info from prmon json
[2026-01-16 16:04:31] 2026-01-16 16:03:45,998 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 16:04:31] 2026-01-16 16:03:45,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 16:04:31] 2026-01-16 16:03:45,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 16:04:31] 2026-01-16 16:03:45,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 16:04:31] 2026-01-16 16:03:46,003 | INFO     | fitting pss+swap vs Time
[2026-01-16 16:04:31] 2026-01-16 16:03:46,003 | INFO     | sum of square deviations: 152858680.0
[2026-01-16 16:04:31] 2026-01-16 16:03:46,004 | INFO     | sum of deviations: 5279875618.0
[2026-01-16 16:04:31] 2026-01-16 16:03:46,004 | INFO     | mean x: 1768576867.0
[2026-01-16 16:04:31] 2026-01-16 16:03:46,008 | INFO     | mean y: 2673939.329113924
[2026-01-16 16:04:31] 2026-01-16 16:03:46,008 | INFO     | intersect: -61085553949.54268
[2026-01-16 16:04:31] 2026-01-16 16:03:46,008 | INFO     | chi2: 0.1415724770190547
[2026-01-16 16:04:31] 2026-01-16 16:03:46,009 | INFO     | current memory leak: 34.54 B/s (using 79 data points, chi2=0.14)
[2026-01-16 16:04:31] 2026-01-16 16:03:46,009 | INFO     | could have reported an average CPU frequency of 2398 MHz (6 samples)
[2026-01-16 16:04:31] 2026-01-16 16:03:46,009 | INFO     | ..............................
[2026-01-16 16:04:31] 2026-01-16 16:03:46,009 | INFO     | . Timing measurements:
[2026-01-16 16:04:31] 2026-01-16 16:03:46,009 | INFO     | . get job = 0 s
[2026-01-16 16:04:31] 2026-01-16 16:03:46,009 | INFO     | . initial setup = 3 s
[2026-01-16 16:04:31] 2026-01-16 16:03:46,010 | INFO     | . payload setup = 16 s
[2026-01-16 16:04:31] 2026-01-16 16:03:46,010 | INFO     | . stage-in = 0 s
[2026-01-16 16:04:31] 2026-01-16 16:03:46,010 | INFO     | . payload execution = 5232 s
[2026-01-16 16:04:31] 2026-01-16 16:03:46,010 | INFO     | . stage-out = 1 s
[2026-01-16 16:04:31] 2026-01-16 16:03:46,010 | INFO     | . log creation = 0 s
[2026-01-16 16:04:31] 2026-01-16 16:03:46,010 | INFO     | ..............................
[2026-01-16 16:04:31] 2026-01-16 16:03:46,223 | INFO     | 
[2026-01-16 16:04:31] 2026-01-16 16:03:46,223 | INFO     | job summary report
[2026-01-16 16:04:31] 2026-01-16 16:03:46,223 | INFO     | --------------------------------------------------
[2026-01-16 16:04:31] 2026-01-16 16:03:46,223 | INFO     | PanDA job id: 6970537474
[2026-01-16 16:04:31] 2026-01-16 16:03:46,223 | INFO     | task id: 48215263
[2026-01-16 16:04:31] 2026-01-16 16:03:46,223 | INFO     | errors: (none)
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | pilot state: finished 
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | transexitcode: 0
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | exeerrorcode: 0
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | exeerrordiag: 
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | exitcode: 0
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | exitmsg: OK
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | cpuconsumptiontime: 29189 s
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | nevents: 400
[2026-01-16 16:04:31] 2026-01-16 16:03:46,224 | INFO     | neventsw: 0
[2026-01-16 16:04:31] 2026-01-16 16:03:46,225 | INFO     | pid: 1105281
[2026-01-16 16:04:31] 2026-01-16 16:03:46,225 | INFO     | pgrp: 1105281
[2026-01-16 16:04:31] 2026-01-16 16:03:46,225 | INFO     | corecount: 12
[2026-01-16 16:04:31] 2026-01-16 16:03:46,225 | INFO     | event service: False
[2026-01-16 16:04:31] 2026-01-16 16:03:46,225 | INFO     | sizes: {0: 2283748, 1: 2284003, 2: 2284031, 12: 2284031, 15: 2284321, 23: 2284349, 5253: 2311157, 5254: 2311156, 5256: 2320256, 5259: 2320312, 5274: 2320506}
[2026-01-16 16:04:31] 2026-01-16 16:03:46,225 | INFO     | --------------------------------------------------
[2026-01-16 16:04:31] 2026-01-16 16:03:46,225 | INFO     | 
[2026-01-16 16:04:31] 2026-01-16 16:03:46,225 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31423/slots/0
[2026-01-16 16:04:31] 2026-01-16 16:03:46,288 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,289 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,289 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,289 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 16:04:31] 2026-01-16 16:03:46,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,291 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 16:04:31] 2026-01-16 16:03:46,291 | INFO     | job 6970537474 has completed (purged errors)
[2026-01-16 16:04:31] 2026-01-16 16:03:46,294 | INFO     | overall cleanup function is called
[2026-01-16 16:04:31] 2026-01-16 16:03:47,320 | INFO     | --- collectZombieJob: --- 10, [1105281]
[2026-01-16 16:04:31] 2026-01-16 16:03:47,320 | INFO     | zombie collector waiting for pid 1105281
[2026-01-16 16:04:31] 2026-01-16 16:03:47,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 16:04:31] 2026-01-16 16:03:47,321 | INFO     | collected zombie processes
[2026-01-16 16:04:31] 2026-01-16 16:03:47,321 | INFO     | will attempt to kill all subprocesses of pid=1105281
[2026-01-16 16:04:31] 2026-01-16 16:03:48,479 | INFO     | process IDs to be killed: [1105281] (in reverse order)
[2026-01-16 16:04:31] 2026-01-16 16:03:48,953 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 16:04:31] 2026-01-16 16:03:48,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 16:04:31] 2026-01-16 16:03:48,987 | INFO     | did not find any defunct processes belonging to 1105281
[2026-01-16 16:04:31] 2026-01-16 16:03:49,010 | INFO     | did not find any defunct processes belonging to 1105281
[2026-01-16 16:04:31] 2026-01-16 16:03:49,010 | INFO     | ready for new job
[2026-01-16 16:04:31] 2026-01-16 16:03:49,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 16:04:31] 2026-01-16 16:03:49,015 | INFO     | ***************************************
[2026-01-16 16:04:31] 2026-01-16 16:03:49,015 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 16:04:31] 2026-01-16 16:03:49,015 | INFO     | ***************************************
[2026-01-16 16:04:31] 2026-01-16 16:03:49,015 | INFO     | 
[2026-01-16 16:04:31] 2026-01-16 16:03:49,030 | INFO     | architecture information:
[2026-01-16 16:04:31] 2026-01-16 16:03:49,035 | INFO     | executing command: cat /etc/os-release
[2026-01-16 16:04:31] 2026-01-16 16:03:49,075 | INFO     | cat /etc/os-release:
[2026-01-16 16:04:31] NAME="CentOS Linux"
[2026-01-16 16:04:31] VERSION="7 (Core)"
[2026-01-16 16:04:31] ID="centos"
[2026-01-16 16:04:31] ID_LIKE="rhel fedora"
[2026-01-16 16:04:31] VERSION_ID="7"
[2026-01-16 16:04:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 16:04:31] ANSI_COLOR="0;31"
[2026-01-16 16:04:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 16:04:31] HOME_URL="https://www.centos.org/"
[2026-01-16 16:04:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 16:04:31] 
[2026-01-16 16:04:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 16:04:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 16:04:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 16:04:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 16:04:31] 
[2026-01-16 16:04:31] 2026-01-16 16:03:49,076 | INFO     | ***************************************
[2026-01-16 16:04:31] 2026-01-16 16:03:49,580 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31423/slots/0
[2026-01-16 16:04:31] 2026-01-16 16:03:49,628 | INFO     | sufficient remaining disk space (306752520192 B)
[2026-01-16 16:04:31] 2026-01-16 16:03:49,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 16:04:31] 2026-01-16 16:03:49,628 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 16:04:31] 2026-01-16 16:03:49,628 | INFO     | update_server=False
[2026-01-16 16:04:31] 2026-01-16 16:03:49,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 16:04:31] 2026-01-16 16:03:49,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 16:04:31] 2026-01-16 16:03:49,825 | INFO     | all data control threads have been joined
[2026-01-16 16:04:31] 2026-01-16 16:03:50,316 | INFO     | all payload control threads have been joined
[2026-01-16 16:04:31] 2026-01-16 16:03:50,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 16:04:31] 2026-01-16 16:03:50,385 | INFO     | aborting loop
[2026-01-16 16:04:31] 2026-01-16 16:03:50,636 | INFO     | [job] retrieve thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:50,703 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:50,776 | INFO     | [payload] failed_post thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:50,830 | INFO     | [data] control thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:50,857 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:51,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 16:04:31] 2026-01-16 16:03:51,220 | INFO     | all job control threads have been joined
[2026-01-16 16:04:31] 2026-01-16 16:03:51,225 | INFO     | [data] copytool_in thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:51,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 16:04:31] 2026-01-16 16:03:51,321 | INFO     | [payload] control thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:51,390 | INFO     | [job] job monitor thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:51,481 | INFO     | [payload] validate_post thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:51,521 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:51,557 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:51,636 | INFO     | [data] copytool_out thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:51,878 | INFO     | [job] validate thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:52,225 | INFO     | [job] control thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:52,246 | INFO     | [job] queue monitor thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:03:55,086 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 16:04:31] 2026-01-16 16:04:19,326 | INFO     | PID=1081610 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 16:04:31] 2026-01-16 16:04:19,326 | INFO     | .. there are 22 such processes running
[2026-01-16 16:04:31] 2026-01-16 16:04:19,327 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 16:04:31] 2026-01-16 16:04:19,327 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 16:04:31] 2026-01-16 16:04:19,327 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 16:04:31] 2026-01-16 16:04:24,756 | INFO     | [monitor] cgroup control has ended
[2026-01-16 16:04:31] 2026-01-16 16:04:25,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125508829673280)>', '<ExcThread(monitor, started 125507920189184)>']
[2026-01-16 16:04:31] 2026-01-16 16:04:26,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 16:04:31] 2026-01-16 16:04:26,368 | INFO     | [monitor] control thread has ended
[2026-01-16 16:04:31] 2026-01-16 16:04:30,722 | INFO     | all workflow threads have been joined
[2026-01-16 16:04:31] 2026-01-16 16:04:30,722 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 16:04:31] 2026-01-16 16:04:30,722 | INFO     | traces error code: 0
[2026-01-16 16:04:31] 2026-01-16 16:04:30,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 16:04:31] 2026-01-16 16:04:30,904 [wrapper] ==== pilot stdout END ====
[2026-01-16 16:04:31] 2026-01-16 16:04:30,914 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 16:04:31] 2026-01-16 16:04:30,924 [wrapper] pilotpid: 1081610
[2026-01-16 16:04:31] 2026-01-16 16:04:30,933 [wrapper] Pilot exit status: 0
[2026-01-16 16:04:31] 2026-01-16 16:04:30,969 [wrapper] pandaids: 6970537474
[2026-01-16 16:04:31] 2026-01-16 16:04:31,223 [wrapper] cleanup supervisor_pilot 1512557 1081611
[2026-01-16 16:04:31] 2026-01-16 16:04:31,232 [wrapper] Test setup, not cleaning
[2026-01-16 16:04:31] 2026-01-16 16:04:31,242 [wrapper] apfmon messages muted
[2026-01-16 16:04:31] 2026-01-16 16:04:31,250 [wrapper] ==== wrapper stdout END ====
[2026-01-16 16:04:31] 2026-01-16 16:04:31,257 [wrapper] ==== wrapper stderr END ====
[2026-01-16 16:04:31]  *** Error codes and diagnostics ***
[2026-01-16 16:04:31]     "exeErrorCode": 0,
[2026-01-16 16:04:31]     "exeErrorDiag": "",
[2026-01-16 16:04:31]     "pilotErrorCode": 0,
[2026-01-16 16:04:31]     "pilotErrorDiag": "",
[2026-01-16 16:04:31]  *** Listing of results directory ***
[2026-01-16 16:04:31] total 735340
[2026-01-16 16:04:31] -rw-r--r-- 1 boinc boinc    579449 Jan 15 08:34 pilot3.tar.gz
[2026-01-16 16:04:31] -rw-r--r-- 1 boinc boinc      5112 Jan 15 08:35 queuedata.json
[2026-01-16 16:04:31] -rwx------ 1 boinc boinc     36322 Jan 15 08:35 runpilot2-wrapper.sh
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc       100 Jan 16 14:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 16:04:31] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 14:34 run_atlas
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc       105 Jan 16 14:34 job.xml
[2026-01-16 16:04:31] -rw-r--r-- 2 boinc boinc 596165724 Jan 16 14:34 EVNT.32794306._001951.pool.root.1
[2026-01-16 16:04:31] drwxrwx--x 2 boinc boinc      4096 Jan 16 14:34 shared
[2026-01-16 16:04:31] -rw-r--r-- 2 boinc boinc    592404 Jan 16 14:34 input.tar.gz
[2026-01-16 16:04:31] -rw-r--r-- 2 boinc boinc     15847 Jan 16 14:34 start_atlas.sh
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 14:34 init_data.xml
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc         0 Jan 16 14:34 boinc_setup_complete
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc         0 Jan 16 14:34 boinc_lockfile
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc      2509 Jan 16 14:34 pandaJob.out
[2026-01-16 16:04:31] -rw------- 1 boinc boinc   1004099 Jan 16 14:35 agis_schedconf.cvmfs.json
[2026-01-16 16:04:31] -rw------- 1 boinc boinc   1516246 Jan 16 14:35 agis_ddmendpoints.agis.ALL.json
[2026-01-16 16:04:31] drwx------ 5 boinc boinc      4096 Jan 16 14:35 pilot3
[2026-01-16 16:04:31] -rw------- 1 boinc boinc 150596066 Jan 16 16:02 HITS.48215263._050273.pool.root.1
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc       530 Jan 16 16:02 boinc_task_state.xml
[2026-01-16 16:04:31] -rw------- 1 boinc boinc      1021 Jan 16 16:03 memory_monitor_summary.json
[2026-01-16 16:04:31] -rw------- 1 boinc boinc    408280 Jan 16 16:03 log.48215263._050273.job.log.tgz.1
[2026-01-16 16:04:31] -rw------- 1 boinc boinc      7731 Jan 16 16:03 heartbeat.json
[2026-01-16 16:04:31] -rw------- 1 boinc boinc        95 Jan 16 16:04 pilot_heartbeat.json
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 16:04 boinc_mmap_file
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc        27 Jan 16 16:04 wrapper_checkpoint.txt
[2026-01-16 16:04:31] -rw------- 1 boinc boinc      4848 Jan 16 16:04 pilotlog.txt
[2026-01-16 16:04:31] -rw------- 1 boinc boinc    741297 Jan 16 16:04 log.48215263._050273.job.log.1
[2026-01-16 16:04:31] -rw------- 1 boinc boinc       357 Jan 16 16:04 output.list
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc       620 Jan 16 16:04 runtime_log
[2026-01-16 16:04:31] -rw------- 1 boinc boinc   1167360 Jan 16 16:04 result.tar.gz
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 16:04 runtime_log.err
[2026-01-16 16:04:31] -rw------- 1 boinc boinc       651 Jan 16 16:04 nRLMDmm0X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5guKDmVIm6jn.diag
[2026-01-16 16:04:31] -rw-rw-r-- 1 boinc boinc     22140 Jan 16 16:04 stderr.txt
[2026-01-16 16:04:31] HITS file was successfully produced:
[2026-01-16 16:04:31] -rw------- 1 boinc boinc 150596066 Jan 16 16:02 shared/HITS.pool.root.1
[2026-01-16 16:04:31]  *** Contents of shared directory: ***
[2026-01-16 16:04:31] total 731008
[2026-01-16 16:04:31] -rw-r--r-- 2 boinc boinc 596165724 Jan 16 14:34 ATLAS.root_0
[2026-01-16 16:04:31] -rw-r--r-- 2 boinc boinc    592404 Jan 16 14:34 input.tar.gz
[2026-01-16 16:04:31] -rw-r--r-- 2 boinc boinc     15847 Jan 16 14:34 start_atlas.sh
[2026-01-16 16:04:31] -rw------- 1 boinc boinc 150596066 Jan 16 16:02 HITS.pool.root.1
[2026-01-16 16:04:31] -rw------- 1 boinc boinc   1167360 Jan 16 16:04 result.tar.gz
16:04:33 (1072493): run_atlas exited; CPU time 29486.428399
16:04:33 (1072493): called boinc_finish(0)

</stderr_txt>
]]>

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