Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:21 (649059): wrapper (7.7.26015): starting
18:33:21 (649059): wrapper: running run_atlas (--nthreads 2)
[2026-01-15 18:33:21] Arguments: --nthreads 2
[2026-01-15 18:33:21] Threads: 2
[2026-01-15 18:33:21] Checking for CVMFS
[2026-01-15 18:33:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 18:33:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 18:33:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 18:33:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 18:33:21] 2.9.2.0 4141607 2419 58268 155180 2 57 20149820 36864001 0 130560 0 1910839 99.989 100534 3982 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 18:33:21] CVMFS is ok
[2026-01-15 18:33:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 18:33:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 18:33:21] Further information can be found at the LHC@home message board.
[2026-01-15 18:33:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 18:33:21] Checking for apptainer binary...
[2026-01-15 18:33:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 18:33:21] Running /usr/bin/apptainer --version
[2026-01-15 18:33:21] apptainer version 1.4.1-1.1
[2026-01-15 18:33:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 18:33:21] thA337
[2026-01-15 18:33:21] apptainer works
[2026-01-15 18:33:22] Set ATHENA_PROC_NUMBER=2
[2026-01-15 18:33:22] Set ATHENA_CORE_NUMBER=2
[2026-01-15 18:33:22] Starting ATLAS job with PandaID=6970289593
[2026-01-15 18:33:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 19:58:12]  *** The last 200 lines of the pilot log: ***
[2026-01-15 19:58:12] 2026-01-15 18:57:42,356 | INFO     | sufficient remaining disk space (489762586624 B)
[2026-01-15 19:58:12] 2026-01-15 18:57:42,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 19:58:12] 2026-01-15 18:57:42,356 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 19:58:12] 2026-01-15 18:57:42,356 | INFO     | update_server=False
[2026-01-15 19:58:12] 2026-01-15 18:57:42,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 19:58:12] 2026-01-15 18:57:42,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 19:58:12] 2026-01-15 18:57:42,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 19:58:12] 2026-01-15 18:57:42,404 | INFO     | aborting loop
[2026-01-15 19:58:12] 2026-01-15 18:57:42,700 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 19:58:12] 2026-01-15 18:57:42,858 | INFO     | [monitor] cgroup control has ended
[2026-01-15 19:58:12] 2026-01-15 18:57:43,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 19:58:12] 2026-01-15 18:57:43,362 | INFO     | [job] retrieve thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:43,363 | INFO     | [job] queue monitor thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:43,376 | INFO     | all data control threads have been joined
[2026-01-15 19:58:12] 2026-01-15 18:57:43,409 | INFO     | [job] job monitor thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:43,572 | INFO     | [data] copytool_in thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:43,678 | INFO     | all payload control threads have been joined
[2026-01-15 19:58:12] 2026-01-15 18:57:43,939 | INFO     | all job control threads have been joined
[2026-01-15 19:58:12] 2026-01-15 18:57:43,990 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:43,992 | INFO     | [job] validate thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:44,121 | INFO     | [payload] validate_post thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:44,122 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:44,382 | INFO     | [data] control thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:44,559 | INFO     | [payload] failed_post thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:44,684 | INFO     | [payload] control thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:44,695 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:44,945 | INFO     | [job] control thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:45,146 | INFO     | [data] copytool_out thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:46,707 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:52,902 | INFO     | job.realtimelogging is not enabled
[2026-01-15 19:58:12] 2026-01-15 18:57:53,908 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 19:58:12] 2026-01-15 18:57:55,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989440825152)>', '<ExcThread(monitor, started 139988821866240)>']
[2026-01-15 19:58:12] 2026-01-15 18:58:00,442 | INFO     | all workflow threads have been joined
[2026-01-15 19:58:12] 2026-01-15 18:58:00,442 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 19:58:12] 2026-01-15 18:58:00,443 | INFO     | traces error code: 0
[2026-01-15 19:58:12] 2026-01-15 18:58:00,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 19:58:12] 2026-01-15 18:58:12,588 | INFO     | PID=652767 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 19:58:12] 2026-01-15 18:58:12,589 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 19:58:12] 2026-01-15 18:58:12,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 19:58:12] 2026-01-15 18:58:12,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 19:58:12] 2026-01-15 18:58:12,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 19:58:12] 2026-01-15 18:58:12,589 | INFO     | [monitor] control thread has ended
[2026-01-15 19:58:12] 2026-01-15 18:58:12,626 [wrapper] ==== pilot stdout END ====
[2026-01-15 19:58:12] 2026-01-15 18:58:12,628 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 19:58:12] 2026-01-15 18:58:12,631 [wrapper] pilotpid: 652767
[2026-01-15 19:58:12] 2026-01-15 18:58:12,632 [wrapper] Pilot exit status: 0
[2026-01-15 19:58:12] 2026-01-15 18:58:12,638 [wrapper] pandaids: 6970289593
[2026-01-15 19:58:12] 2026-01-15 18:58:12,651 [wrapper] cleanup supervisor_pilot  670598 652768
[2026-01-15 19:58:12] 2026-01-15 18:58:12,653 [wrapper] Test setup, not cleaning
[2026-01-15 19:58:12] 2026-01-15 18:58:12,655 [wrapper] apfmon messages muted
[2026-01-15 19:58:12] 2026-01-15 18:58:12,657 [wrapper] ==== wrapper stdout END ====
[2026-01-15 19:58:12] 2026-01-15 18:58:12,659 [wrapper] ==== wrapper stderr END ====
[2026-01-15 19:58:12]  *** Error codes and diagnostics ***
[2026-01-15 19:58:12]     "exeErrorCode": 0,
[2026-01-15 19:58:12]     "exeErrorDiag": "",
[2026-01-15 19:58:12]     "pilotErrorCode": 0,
[2026-01-15 19:58:12]     "pilotErrorDiag": "",
[2026-01-15 19:58:12]  *** Listing of results directory ***
[2026-01-15 19:58:12] total 738708
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc      5112 Jan 15 05:50 queuedata.json
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc    579449 Jan 15 05:50 pilot3.tar.gz
[2026-01-15 19:58:12] -rwx------ 1 boinc boinc     36322 Jan 15 05:50 runpilot2-wrapper.sh
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc       100 Jan 15 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 19:58:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 18:33 run_atlas
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc       105 Jan 15 18:33 job.xml
[2026-01-15 19:58:12] -rw-r--r-- 2 boinc boinc 597591561 Jan 15 18:33 EVNT.32794306._001768.pool.root.1
[2026-01-15 19:58:12] -rw-r--r-- 2 boinc boinc    592398 Jan 15 18:33 input.tar.gz
[2026-01-15 19:58:12] -rw-r--r-- 2 boinc boinc     15847 Jan 15 18:33 start_atlas.sh
[2026-01-15 19:58:12] drwxrwx--x 2 boinc boinc      4096 Jan 15 18:33 shared
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc         0 Jan 15 18:33 boinc_setup_complete
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc      6206 Jan 15 18:33 init_data.xml
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc         0 Jan 15 18:33 boinc_lockfile
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc      2509 Jan 15 18:33 pandaJob.out
[2026-01-15 19:58:12] -rw------- 1 boinc boinc   1004075 Jan 15 18:33 agis_schedconf.cvmfs.json
[2026-01-15 19:58:12] -rw------- 1 boinc boinc   1516246 Jan 15 18:33 agis_ddmendpoints.agis.ALL.json
[2026-01-15 19:58:12] drwx------ 5 boinc boinc      4096 Jan 15 18:33 pilot3
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc       530 Jan 15 19:57 boinc_task_state.xml
[2026-01-15 19:58:12] -rw------- 1 boinc boinc 152966856 Jan 15 19:57 HITS.48215263._045410.pool.root.1
[2026-01-15 19:58:12] -rw------- 1 boinc boinc      1008 Jan 15 19:57 memory_monitor_summary.json
[2026-01-15 19:58:12] -rw------- 1 boinc boinc    245096 Jan 15 19:57 log.48215263._045410.job.log.tgz.1
[2026-01-15 19:58:12] -rw------- 1 boinc boinc      7745 Jan 15 19:57 heartbeat.json
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc      8192 Jan 15 19:57 boinc_mmap_file
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc        26 Jan 15 19:57 wrapper_checkpoint.txt
[2026-01-15 19:58:12] -rw------- 1 boinc boinc       746 Jan 15 19:58 pilotlog.txt
[2026-01-15 19:58:12] -rw------- 1 boinc boinc        95 Jan 15 19:58 pilot_heartbeat.json
[2026-01-15 19:58:12] -rw------- 1 boinc boinc    740229 Jan 15 19:58 log.48215263._045410.job.log.1
[2026-01-15 19:58:12] -rw------- 1 boinc boinc       357 Jan 15 19:58 output.list
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc       620 Jan 15 19:58 runtime_log
[2026-01-15 19:58:12] -rw------- 1 boinc boinc   1003520 Jan 15 19:58 result.tar.gz
[2026-01-15 19:58:12] -rw------- 1 boinc boinc       656 Jan 15 19:58 wm3NDmnUU08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmw1tKDm6n9eYn.diag
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc      8897 Jan 15 19:58 runtime_log.err
[2026-01-15 19:58:12] -rw-r--r-- 1 boinc boinc      7842 Jan 15 19:58 stderr.txt
[2026-01-15 19:58:12] HITS file was successfully produced:
[2026-01-15 19:58:12] -rw------- 1 boinc boinc 152966856 Jan 15 19:57 shared/HITS.pool.root.1
[2026-01-15 19:58:12]  *** Contents of shared directory: ***
[2026-01-15 19:58:12] total 734556
[2026-01-15 19:58:12] -rw-r--r-- 2 boinc boinc 597591561 Jan 15 18:33 ATLAS.root_0
[2026-01-15 19:58:12] -rw-r--r-- 2 boinc boinc    592398 Jan 15 18:33 input.tar.gz
[2026-01-15 19:58:12] -rw-r--r-- 2 boinc boinc     15847 Jan 15 18:33 start_atlas.sh
[2026-01-15 19:58:12] -rw------- 1 boinc boinc 152966856 Jan 15 19:57 HITS.pool.root.1
[2026-01-15 19:58:12] -rw------- 1 boinc boinc   1003520 Jan 15 19:58 result.tar.gz
19:58:14 (649059): run_atlas exited; CPU time 9675.286445
19:58:14 (649059): called boinc_finish(0)

</stderr_txt>
]]>

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