Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:20:11 (12044): wrapper (7.7.26015): starting
06:20:11 (12044): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 06:20:11] Arguments: --nthreads 8
[2026-01-15 06:20:11] Threads: 8
[2026-01-15 06:20:11] Checking for CVMFS
[2026-01-15 06:20:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 06:20:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 06:20:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 06:20:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 06:20:12] 2.11.2.0 2827 115010 83196 155167 2 57 19454104 20275201 1 130560 0 23942643 99.753 7828290 30069 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 06:20:12] CVMFS is ok
[2026-01-15 06:20:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 06:20:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 06:20:12] Further information can be found at the LHC@home message board.
[2026-01-15 06:20:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 06:20:12] Checking for apptainer binary...
[2026-01-15 06:20:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 06:20:12] Running /usr/bin/apptainer --version
[2026-01-15 06:20:12] apptainer version 1.3.2-1.el7
[2026-01-15 06:20:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 06:20:13] c-204-30.aglt2.org
[2026-01-15 06:20:13] apptainer works
[2026-01-15 06:20:13] Set ATHENA_PROC_NUMBER=8
[2026-01-15 06:20:13] Set ATHENA_CORE_NUMBER=8
[2026-01-15 06:20:13] Starting ATLAS job with PandaID=6970287238
[2026-01-15 06:20:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 07:39:02]  *** The last 200 lines of the pilot log: ***
[2026-01-15 07:39:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 07:39:02]  replicas=None
[2026-01-15 07:39:02]  scope=mc23_13p6TeV
[2026-01-15 07:39:02]  status=None
[2026-01-15 07:39:02]  status_code=0
[2026-01-15 07:39:02]  storage_token=
[2026-01-15 07:39:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6970287238/log.48215263._044382.job.log.tgz.1
[2026-01-15 07:39:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/30/log.48215263._044382.job.log.tgz.1
[2026-01-15 07:39:02]  workdir=None
[2026-01-15 07:39:02] ]
[2026-01-15 07:39:02] 2026-01-15 12:38:21,400 | INFO     | transferring file log.48215263._044382.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6970287238/log.48215263._044382.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 07:39:02] 2026-01-15 12:38:21,400 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6970287238/log.48215263._044382.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._044382.job
[2026-01-15 07:39:02] 2026-01-15 12:38:21,431 | INFO     | adding to output.list: log.48215263._044382.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/30/log.48215263._044382.job.log.tg
[2026-01-15 07:39:02] 2026-01-15 12:38:21,432 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 07:39:02] 2026-01-15 12:38:21,432 | INFO     | summary of transferred files:
[2026-01-15 07:39:02] 2026-01-15 12:38:21,432 | INFO     |  -- lfn=log.48215263._044382.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 07:39:02] 2026-01-15 12:38:21,433 | INFO     | stage-out finished correctly
[2026-01-15 07:39:02] 2026-01-15 12:38:21,573 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 07:39:02] 2026-01-15 12:38:22,236 | INFO     | monitor loop #348: job 0:6970287238 is in state 'finished'
[2026-01-15 07:39:02] 2026-01-15 12:38:22,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 07:39:02] 2026-01-15 12:38:22,740 | INFO     | time since job start (4671s) is within the limit (349056.0s)
[2026-01-15 07:39:02] 2026-01-15 12:38:23,001 | INFO     | job 6970287238 has state=finished
[2026-01-15 07:39:02] 2026-01-15 12:38:23,001 | INFO     | preparing for final server update for job 6970287238 in state='finished'
[2026-01-15 07:39:02] 2026-01-15 12:38:23,003 | INFO     | this job has now completed (state=finished)
[2026-01-15 07:39:02] 2026-01-15 12:38:23,003 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 07:39:02] 2026-01-15 12:38:23,003 | INFO     | log transfer has been attempted: DONE
[2026-01-15 07:39:02] 2026-01-15 12:38:23,003 | INFO     | job 6970287238 has finished - writing final server update
[2026-01-15 07:39:02] 2026-01-15 12:38:23,004 | INFO     | total number of processed events: 400 (read)
[2026-01-15 07:39:02] 2026-01-15 12:38:23,008 | INFO     | executing command: lscpu
[2026-01-15 07:39:02] 2026-01-15 12:38:23,044 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 07:39:02] 2026-01-15 12:38:23,866 | INFO     | PID=15801 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 07:39:02] 2026-01-15 12:38:24,740 | INFO     | monitor loop #349: job 0:6970287238 is in state 'finished'
[2026-01-15 07:39:02] 2026-01-15 12:38:24,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 07:39:02] 2026-01-15 12:38:24,867 | INFO     | time since job start (4673s) is within the limit (349056.0s)
[2026-01-15 07:39:02] 2026-01-15 12:38:26,872 | INFO     | time since job start (4675s) is within the limit (349056.0s)
[2026-01-15 07:39:02] 2026-01-15 12:38:27,305 | INFO     | monitor loop #350: job 0:6970287238 is in state 'finished'
[2026-01-15 07:39:02] 2026-01-15 12:38:27,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 07:39:02] 2026-01-15 12:38:28,877 | INFO     | time since job start (4677s) is within the limit (349056.0s)
[2026-01-15 07:39:02] 2026-01-15 12:38:29,005 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 07:39:02] 2026-01-15 12:38:29,009 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-15 07:39:02] 2026-01-15 12:38:29,011 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970287238/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 07:39:02] 2026-01-15 12:38:29,012 | INFO     | extracted standard info from prmon json
[2026-01-15 07:39:02] 2026-01-15 12:38:29,012 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 07:39:02] 2026-01-15 12:38:29,013 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 07:39:02] 2026-01-15 12:38:29,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 07:39:02] 2026-01-15 12:38:29,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 07:39:02] 2026-01-15 12:38:29,015 | INFO     | fitting pss+swap vs Time
[2026-01-15 07:39:02] 2026-01-15 12:38:29,016 | INFO     | sum of square deviations: 101843770.0
[2026-01-15 07:39:02] 2026-01-15 12:38:29,016 | INFO     | sum of deviations: -6731430337.0
[2026-01-15 07:39:02] 2026-01-15 12:38:29,016 | INFO     | mean x: 1768478443.0
[2026-01-15 07:39:02] 2026-01-15 12:38:29,016 | INFO     | mean y: 2602680.217391304
[2026-01-15 07:39:02] 2026-01-15 12:38:29,017 | INFO     | intersect: 116891337666.56682
[2026-01-15 07:39:02] 2026-01-15 12:38:29,017 | INFO     | chi2: 0.07579276355480483
[2026-01-15 07:39:02] 2026-01-15 12:38:29,017 | INFO     | current memory leak: -66.10 B/s (using 69 data points, chi2=0.08)
[2026-01-15 07:39:02] 2026-01-15 12:38:29,017 | INFO     | could have reported an average CPU frequency of 1912 MHz (6 samples)
[2026-01-15 07:39:02] 2026-01-15 12:38:29,018 | INFO     | ..............................
[2026-01-15 07:39:02] 2026-01-15 12:38:29,018 | INFO     | . Timing measurements:
[2026-01-15 07:39:02] 2026-01-15 12:38:29,018 | INFO     | . get job = 0 s
[2026-01-15 07:39:02] 2026-01-15 12:38:29,018 | INFO     | . initial setup = 2 s
[2026-01-15 07:39:02] 2026-01-15 12:38:29,018 | INFO     | . payload setup = 8 s
[2026-01-15 07:39:02] 2026-01-15 12:38:29,018 | INFO     | . stage-in = 0 s
[2026-01-15 07:39:02] 2026-01-15 12:38:29,019 | INFO     | . payload execution = 4639 s
[2026-01-15 07:39:02] 2026-01-15 12:38:29,019 | INFO     | . stage-out = 0 s
[2026-01-15 07:39:02] 2026-01-15 12:38:29,019 | INFO     | . log creation = 0 s
[2026-01-15 07:39:02] 2026-01-15 12:38:29,019 | INFO     | ..............................
[2026-01-15 07:39:02] 2026-01-15 12:38:29,108 | INFO     | 
[2026-01-15 07:39:02] 2026-01-15 12:38:29,108 | INFO     | job summary report
[2026-01-15 07:39:02] 2026-01-15 12:38:29,108 | INFO     | --------------------------------------------------
[2026-01-15 07:39:02] 2026-01-15 12:38:29,109 | INFO     | PanDA job id: 6970287238
[2026-01-15 07:39:02] 2026-01-15 12:38:29,109 | INFO     | task id: 48215263
[2026-01-15 07:39:02] 2026-01-15 12:38:29,109 | INFO     | errors: (none)
[2026-01-15 07:39:02] 2026-01-15 12:38:29,109 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 07:39:02] 2026-01-15 12:38:29,109 | INFO     | pilot state: finished 
[2026-01-15 07:39:02] 2026-01-15 12:38:29,109 | INFO     | transexitcode: 0
[2026-01-15 07:39:02] 2026-01-15 12:38:29,110 | INFO     | exeerrorcode: 0
[2026-01-15 07:39:02] 2026-01-15 12:38:29,110 | INFO     | exeerrordiag: 
[2026-01-15 07:39:02] 2026-01-15 12:38:29,110 | INFO     | exitcode: 0
[2026-01-15 07:39:02] 2026-01-15 12:38:29,110 | INFO     | exitmsg: OK
[2026-01-15 07:39:02] 2026-01-15 12:38:29,110 | INFO     | cpuconsumptiontime: 33656 s
[2026-01-15 07:39:02] 2026-01-15 12:38:29,110 | INFO     | nevents: 400
[2026-01-15 07:39:02] 2026-01-15 12:38:29,110 | INFO     | neventsw: 0
[2026-01-15 07:39:02] 2026-01-15 12:38:29,110 | INFO     | pid: 22236
[2026-01-15 07:39:02] 2026-01-15 12:38:29,110 | INFO     | pgrp: 22236
[2026-01-15 07:39:02] 2026-01-15 12:38:29,111 | INFO     | corecount: 8
[2026-01-15 07:39:02] 2026-01-15 12:38:29,111 | INFO     | event service: False
[2026-01-15 07:39:02] 2026-01-15 12:38:29,111 | INFO     | sizes: {0: 2283780, 1: 2283979, 7: 2284241, 11: 2284269, 4651: 2310400, 4653: 2319582, 4660: 2319720}
[2026-01-15 07:39:02] 2026-01-15 12:38:29,111 | INFO     | --------------------------------------------------
[2026-01-15 07:39:02] 2026-01-15 12:38:29,111 | INFO     | 
[2026-01-15 07:39:02] 2026-01-15 12:38:29,111 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 07:39:02] 2026-01-15 12:38:29,141 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,141 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,142 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,142 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,143 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,143 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,144 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 07:39:02] 2026-01-15 12:38:29,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,144 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 07:39:02] 2026-01-15 12:38:29,144 | INFO     | job 6970287238 has completed (purged errors)
[2026-01-15 07:39:02] 2026-01-15 12:38:29,145 | INFO     | overall cleanup function is called
[2026-01-15 07:39:02] 2026-01-15 12:38:30,152 | INFO     | --- collectZombieJob: --- 10, [22236]
[2026-01-15 07:39:02] 2026-01-15 12:38:30,152 | INFO     | zombie collector waiting for pid 22236
[2026-01-15 07:39:02] 2026-01-15 12:38:30,231 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 07:39:02] 2026-01-15 12:38:30,231 | INFO     | collected zombie processes
[2026-01-15 07:39:02] 2026-01-15 12:38:30,231 | INFO     | will attempt to kill all subprocesses of pid=22236
[2026-01-15 07:39:02] 2026-01-15 12:38:30,320 | INFO     | process IDs to be killed: [22236] (in reverse order)
[2026-01-15 07:39:02] 2026-01-15 12:38:30,404 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 07:39:02] 2026-01-15 12:38:30,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 07:39:02] 2026-01-15 12:38:30,409 | INFO     | did not find any defunct processes belonging to 22236
[2026-01-15 07:39:02] 2026-01-15 12:38:30,413 | INFO     | did not find any defunct processes belonging to 22236
[2026-01-15 07:39:02] 2026-01-15 12:38:30,413 | INFO     | ready for new job
[2026-01-15 07:39:02] 2026-01-15 12:38:30,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 07:39:02] 2026-01-15 12:38:30,415 | INFO     | ***************************************
[2026-01-15 07:39:02] 2026-01-15 12:38:30,416 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 07:39:02] 2026-01-15 12:38:30,416 | INFO     | ***************************************
[2026-01-15 07:39:02] 2026-01-15 12:38:30,416 | INFO     | 
[2026-01-15 07:39:02] 2026-01-15 12:38:30,416 | INFO     | architecture information:
[2026-01-15 07:39:02] 2026-01-15 12:38:30,417 | INFO     | executing command: cat /etc/os-release
[2026-01-15 07:39:02] 2026-01-15 12:38:30,441 | INFO     | cat /etc/os-release:
[2026-01-15 07:39:02] NAME="CentOS Linux"
[2026-01-15 07:39:02] VERSION="7 (Core)"
[2026-01-15 07:39:02] ID="centos"
[2026-01-15 07:39:02] ID_LIKE="rhel fedora"
[2026-01-15 07:39:02] VERSION_ID="7"
[2026-01-15 07:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 07:39:02] ANSI_COLOR="0;31"
[2026-01-15 07:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 07:39:02] HOME_URL="https://www.centos.org/"
[2026-01-15 07:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 07:39:02] 
[2026-01-15 07:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 07:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 07:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 07:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 07:39:02] 
[2026-01-15 07:39:02] 2026-01-15 12:38:30,441 | INFO     | ***************************************
[2026-01-15 07:39:02] 2026-01-15 12:38:30,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 07:39:02] 2026-01-15 12:38:30,967 | INFO     | sufficient remaining disk space (17822646272 B)
[2026-01-15 07:39:02] 2026-01-15 12:38:30,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 07:39:02] 2026-01-15 12:38:30,968 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 07:39:02] 2026-01-15 12:38:30,968 | INFO     | update_server=False
[2026-01-15 07:39:02] 2026-01-15 12:38:30,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 07:39:02] 2026-01-15 12:38:30,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 07:39:02] 2026-01-15 12:38:30,969 | INFO     | aborting loop
[2026-01-15 07:39:02] 2026-01-15 12:38:30,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 07:39:02] 2026-01-15 12:38:30,981 | INFO     | all payload control threads have been joined
[2026-01-15 07:39:02] 2026-01-15 12:38:31,672 | INFO     | all job control threads have been joined
[2026-01-15 07:39:02] 2026-01-15 12:38:31,872 | INFO     | all data control threads have been joined
[2026-01-15 07:39:02] 2026-01-15 12:38:31,974 | INFO     | [job] retrieve thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:31,975 | INFO     | [job] job monitor thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:31,975 | INFO     | [job] queue monitor thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:31,987 | INFO     | [payload] control thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:32,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 07:39:02] 2026-01-15 12:38:32,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 07:39:02] 2026-01-15 12:38:32,526 | INFO     | [job] validate thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:32,537 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:32,640 | INFO     | [payload] validate_post thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:32,677 | INFO     | [job] control thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:32,873 | INFO     | [data] control thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:32,987 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:33,006 | INFO     | [data] copytool_in thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:33,017 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:33,134 | INFO     | [payload] failed_post thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:33,328 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:34,065 | INFO     | [data] copytool_out thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:36,175 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 07:39:02] 2026-01-15 12:38:38,735 | INFO     | [monitor] cgroup control has ended
[2026-01-15 07:39:02] 2026-01-15 12:38:39,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097011132224)>', '<ExcThread(monitor, started 140095969543936)>']
[2026-01-15 07:39:02] 2026-01-15 12:38:44,747 | INFO     | all workflow threads have been joined
[2026-01-15 07:39:02] 2026-01-15 12:38:44,747 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 07:39:02] 2026-01-15 12:38:44,748 | INFO     | traces error code: 0
[2026-01-15 07:39:02] 2026-01-15 12:38:44,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 07:39:02] 2026-01-15 12:39:02,102 | INFO     | PID=15801 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 07:39:02] 2026-01-15 12:39:02,103 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 07:39:02] 2026-01-15 12:39:02,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 07:39:02] 2026-01-15 12:39:02,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 07:39:02] 2026-01-15 12:39:02,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 07:39:02] 2026-01-15 12:39:02,103 | CRITICAL | thread 'MainThread' is not alive
[2026-01-15 07:39:02] 2026-01-15 12:39:02,103 | INFO     | [monitor] control thread has ended
[2026-01-15 07:39:02] 2026-01-15 12:39:02,219 [wrapper] ==== pilot stdout END ====
[2026-01-15 07:39:02] 2026-01-15 12:39:02,223 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 07:39:02] 2026-01-15 12:39:02,228 [wrapper] pilotpid: 15801
[2026-01-15 07:39:02] 2026-01-15 12:39:02,233 [wrapper] Pilot exit status: 0
[2026-01-15 07:39:02] 2026-01-15 12:39:02,252 [wrapper] pandaids: 6970287238
[2026-01-15 07:39:02] 2026-01-15 12:39:02,296 [wrapper] cleanup supervisor_pilot 25758 15802
[2026-01-15 07:39:02] 2026-01-15 12:39:02,300 [wrapper] Test setup, not cleaning
[2026-01-15 07:39:02] 2026-01-15 12:39:02,305 [wrapper] apfmon messages muted
[2026-01-15 07:39:02] 2026-01-15 12:39:02,309 [wrapper] ==== wrapper stdout END ====
[2026-01-15 07:39:02] 2026-01-15 12:39:02,313 [wrapper] ==== wrapper stderr END ====
[2026-01-15 07:39:02]  *** Error codes and diagnostics ***
[2026-01-15 07:39:02]     "exeErrorCode": 0,
[2026-01-15 07:39:02]     "exeErrorDiag": "",
[2026-01-15 07:39:02]     "pilotErrorCode": 0,
[2026-01-15 07:39:02]     "pilotErrorDiag": "",
[2026-01-15 07:39:02]  *** Listing of results directory ***
[2026-01-15 07:39:02] total 732796
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 22:00 pilot3.tar.gz
[2026-01-15 07:39:02] -rwx------ 1 boincer umatlas     36322 Jan 14 22:04 runpilot2-wrapper.sh
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 22:10 queuedata.json
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas       100 Jan 15 06:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 07:39:02] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 06:20 run_atlas
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas       105 Jan 15 06:20 job.xml
[2026-01-15 07:39:02] -rw-r--r-- 2 boincer umatlas 600876861 Jan 15 06:20 EVNT.32794306._001727.pool.root.1
[2026-01-15 07:39:02] drwxrwx--x 2 boincer umatlas      4096 Jan 15 06:20 shared
[2026-01-15 07:39:02] -rw-r--r-- 2 boincer umatlas    592407 Jan 15 06:20 input.tar.gz
[2026-01-15 07:39:02] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 06:20 start_atlas.sh
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas         0 Jan 15 06:20 boinc_lockfile
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas      2508 Jan 15 06:20 pandaJob.out
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas        57 Jan 15 06:20 setup.sh.local
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas   1004126 Jan 15 06:20 agis_schedconf.cvmfs.json
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas   1516246 Jan 15 06:20 agis_ddmendpoints.agis.ALL.json
[2026-01-15 07:39:02] drwx------ 5 boincer umatlas      4096 Jan 15 06:20 pilot3
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas      5910 Jan 15 07:37 init_data.xml
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas 143546459 Jan 15 07:37 HITS.48215263._044382.pool.root.1
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas       530 Jan 15 07:37 boinc_task_state.xml
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas      1044 Jan 15 07:38 memory_monitor_summary.json
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas    337626 Jan 15 07:38 log.48215263._044382.job.log.tgz.1
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas      7845 Jan 15 07:38 heartbeat.json
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 07:38 boinc_mmap_file
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas        27 Jan 15 07:38 wrapper_checkpoint.txt
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas        95 Jan 15 07:39 pilot_heartbeat.json
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas       815 Jan 15 07:39 pilotlog.txt
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas    675334 Jan 15 07:39 log.48215263._044382.job.log.1
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas       357 Jan 15 07:39 output.list
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas       620 Jan 15 07:39 runtime_log
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas   1034240 Jan 15 07:39 result.tar.gz
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas      9342 Jan 15 07:39 runtime_log.err
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas       658 Jan 15 07:39 LeOLDmAqS08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcytKDmSuasmn.diag
[2026-01-15 07:39:02] -rw-r--r-- 1 boincer umatlas     21982 Jan 15 07:39 stderr.txt
[2026-01-15 07:39:02] HITS file was successfully produced:
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas 143546459 Jan 15 07:37 shared/HITS.pool.root.1
[2026-01-15 07:39:02]  *** Contents of shared directory: ***
[2026-01-15 07:39:02] total 728596
[2026-01-15 07:39:02] -rw-r--r-- 2 boincer umatlas 600876861 Jan 15 06:20 ATLAS.root_0
[2026-01-15 07:39:02] -rw-r--r-- 2 boincer umatlas    592407 Jan 15 06:20 input.tar.gz
[2026-01-15 07:39:02] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 06:20 start_atlas.sh
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas 143546459 Jan 15 07:37 HITS.pool.root.1
[2026-01-15 07:39:02] -rw------- 1 boincer umatlas   1034240 Jan 15 07:39 result.tar.gz
07:39:03 (12044): run_atlas exited; CPU time 33613.040339
07:39:03 (12044): called boinc_finish(0)

</stderr_txt>
]]>

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