Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:29:39 (3471152): wrapper (7.7.26015): starting
13:29:39 (3471152): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 13:29:39] Arguments: --nthreads 12
[2026-01-15 13:29:39] Threads: 12
[2026-01-15 13:29:39] Checking for CVMFS
[2026-01-15 13:29:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 13:29:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 13:29:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 13:29:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 13:29:40] 2.13.3.0 877320 4517 80672 155171 0 57 2218943 4097024 923 130560 0 6515974 99.967 395374 9233 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-15 13:29:40] CVMFS is ok
[2026-01-15 13:29:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 13:29:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 13:29:40] Further information can be found at the LHC@home message board.
[2026-01-15 13:29:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 13:29:40] Checking for apptainer binary...
[2026-01-15 13:29:40] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-15 13:29:40] apptainer is not installed, using version from CVMFS
[2026-01-15 13:29:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 13:29:40] pckelar2.cern.ch
[2026-01-15 13:29:40] apptainer works
[2026-01-15 13:29:40] Set ATHENA_PROC_NUMBER=12
[2026-01-15 13:29:40] Set ATHENA_CORE_NUMBER=12
[2026-01-15 13:29:40] Starting ATLAS job with PandaID=6970285063
[2026-01-15 13:29:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 14:42:12]  *** The last 200 lines of the pilot log: ***
[2026-01-15 14:42:12]  storage_token=
[2026-01-15 14:42:12]  surl=/var/lib/boinc/slots/15/PanDA_Pilot-6970285063/log.48215263._043249.job.log.tgz.1
[2026-01-15 14:42:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/7a/log.48215263._043249.job.log.tgz.1
[2026-01-15 14:42:12]  workdir=None
[2026-01-15 14:42:12] ]
[2026-01-15 14:42:12] 2026-01-15 13:41:28,338 | INFO     | transferring file log.48215263._043249.job.log.tgz.1 from /var/lib/boinc/slots/15/PanDA_Pilot-6970285063/log.48215263._043249.job.log.tgz.1 to /var/lib/boinc/slots
[2026-01-15 14:42:12] 2026-01-15 13:41:28,339 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/15/PanDA_Pilot-6970285063/log.48215263._043249.job.log.tgz.1 /var/lib/boinc/slots/15/log.48215263._043249.j
[2026-01-15 14:42:12] 2026-01-15 13:41:28,356 | INFO     | adding to output.list: log.48215263._043249.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/7a/log.48215263._043249.job.log.tg
[2026-01-15 14:42:12] 2026-01-15 13:41:28,357 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 14:42:12] 2026-01-15 13:41:28,357 | INFO     | summary of transferred files:
[2026-01-15 14:42:12] 2026-01-15 13:41:28,357 | INFO     |  -- lfn=log.48215263._043249.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 14:42:12] 2026-01-15 13:41:28,357 | INFO     | stage-out finished correctly
[2026-01-15 14:42:12] 2026-01-15 13:41:28,837 | INFO     | time since job start (4300s) is within the limit (349056.0s)
[2026-01-15 14:42:12] 2026-01-15 13:41:30,823 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 14:42:12] 2026-01-15 13:41:30,846 | INFO     | time since job start (4302s) is within the limit (349056.0s)
[2026-01-15 14:42:12] 2026-01-15 13:41:32,862 | INFO     | time since job start (4304s) is within the limit (349056.0s)
[2026-01-15 14:42:12] 2026-01-15 13:41:33,356 | INFO     | job 6970285063 has state=finished
[2026-01-15 14:42:12] 2026-01-15 13:41:33,356 | INFO     | preparing for final server update for job 6970285063 in state='finished'
[2026-01-15 14:42:12] 2026-01-15 13:41:33,357 | INFO     | this job has now completed (state=finished)
[2026-01-15 14:42:12] 2026-01-15 13:41:33,357 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 14:42:12] 2026-01-15 13:41:33,357 | INFO     | log transfer has been attempted: DONE
[2026-01-15 14:42:12] 2026-01-15 13:41:33,357 | INFO     | job 6970285063 has finished - writing final server update
[2026-01-15 14:42:12] 2026-01-15 13:41:33,358 | INFO     | total number of processed events: 400 (read)
[2026-01-15 14:42:12] 2026-01-15 13:41:33,359 | INFO     | executing command: lscpu
[2026-01-15 14:42:12] 2026-01-15 13:41:33,394 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 14:42:12] 2026-01-15 13:41:33,622 | WARNING  | process 3482540 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 14:42:12] 2026-01-15 13:41:33,623 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6970285063/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 14:42:12] 2026-01-15 13:41:33,800 | INFO     | number of running child processes to parent process 3482540: 1
[2026-01-15 14:42:12] 2026-01-15 13:41:33,800 | INFO     | maximum number of monitored processes: 6
[2026-01-15 14:42:12] 2026-01-15 13:41:34,867 | INFO     | time since job start (4306s) is within the limit (349056.0s)
[2026-01-15 14:42:12] 2026-01-15 13:41:36,095 | INFO     | PID=3474997 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 14:42:12] 2026-01-15 13:41:36,095 | INFO     | .. there are 2 such processes running
[2026-01-15 14:42:12] 2026-01-15 13:41:36,303 | INFO     | monitor loop #317: job 0:6970285063 is in state 'finished'
[2026-01-15 14:42:12] 2026-01-15 13:41:36,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:42:12] 2026-01-15 13:41:37,095 | INFO     | time since job start (4309s) is within the limit (349056.0s)
[2026-01-15 14:42:12] 2026-01-15 13:41:38,806 | INFO     | monitor loop #318: job 0:6970285063 is in state 'finished'
[2026-01-15 14:42:12] 2026-01-15 13:41:38,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:42:12] 2026-01-15 13:41:39,101 | INFO     | time since job start (4311s) is within the limit (349056.0s)
[2026-01-15 14:42:12] 2026-01-15 13:41:40,067 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 14:42:12] 2026-01-15 13:41:40,073 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2841.5540416666677
[2026-01-15 14:42:12] 2026-01-15 13:41:40,078 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6970285063/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 14:42:12] 2026-01-15 13:41:40,079 | INFO     | extracted standard info from prmon json
[2026-01-15 14:42:12] 2026-01-15 13:41:40,080 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 14:42:12] 2026-01-15 13:41:40,080 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 14:42:12] 2026-01-15 13:41:40,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 14:42:12] 2026-01-15 13:41:40,080 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 14:42:12] 2026-01-15 13:41:40,083 | INFO     | fitting pss+swap vs Time
[2026-01-15 14:42:12] 2026-01-15 13:41:40,083 | INFO     | sum of square deviations: 77515872.0
[2026-01-15 14:42:12] 2026-01-15 13:41:40,084 | INFO     | sum of deviations: -8406666687.999999
[2026-01-15 14:42:12] 2026-01-15 13:41:40,084 | INFO     | mean x: 1768482414.0
[2026-01-15 14:42:12] 2026-01-15 13:41:40,084 | INFO     | mean y: 2866304.206349206
[2026-01-15 14:42:12] 2026-01-15 13:41:40,085 | INFO     | intersect: 191796389546.61563
[2026-01-15 14:42:12] 2026-01-15 13:41:40,085 | INFO     | chi2: 0.08114651085083621
[2026-01-15 14:42:12] 2026-01-15 13:41:40,085 | INFO     | current memory leak: -108.45 B/s (using 63 data points, chi2=0.08)
[2026-01-15 14:42:12] 2026-01-15 13:41:40,085 | INFO     | could have reported an average CPU frequency of 2815 MHz (6 samples)
[2026-01-15 14:42:12] 2026-01-15 13:41:40,086 | INFO     | ..............................
[2026-01-15 14:42:12] 2026-01-15 13:41:40,086 | INFO     | . Timing measurements:
[2026-01-15 14:42:12] 2026-01-15 13:41:40,086 | INFO     | . get job = 0 s
[2026-01-15 14:42:12] 2026-01-15 13:41:40,086 | INFO     | . initial setup = 1 s
[2026-01-15 14:42:12] 2026-01-15 13:41:40,086 | INFO     | . payload setup = 8 s
[2026-01-15 14:42:12] 2026-01-15 13:41:40,087 | INFO     | . stage-in = 0 s
[2026-01-15 14:42:12] 2026-01-15 13:41:40,087 | INFO     | . payload execution = 4270 s
[2026-01-15 14:42:12] 2026-01-15 13:41:40,087 | INFO     | . stage-out = 0 s
[2026-01-15 14:42:12] 2026-01-15 13:41:40,087 | INFO     | . log creation = 0 s
[2026-01-15 14:42:12] 2026-01-15 13:41:40,087 | INFO     | ..............................
[2026-01-15 14:42:12] 2026-01-15 13:41:40,246 | INFO     | 
[2026-01-15 14:42:12] 2026-01-15 13:41:40,246 | INFO     | job summary report
[2026-01-15 14:42:12] 2026-01-15 13:41:40,246 | INFO     | --------------------------------------------------
[2026-01-15 14:42:12] 2026-01-15 13:41:40,246 | INFO     | PanDA job id: 6970285063
[2026-01-15 14:42:12] 2026-01-15 13:41:40,246 | INFO     | task id: 48215263
[2026-01-15 14:42:12] 2026-01-15 13:41:40,247 | INFO     | errors: (none)
[2026-01-15 14:42:12] 2026-01-15 13:41:40,247 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 14:42:12] 2026-01-15 13:41:40,247 | INFO     | pilot state: finished 
[2026-01-15 14:42:12] 2026-01-15 13:41:40,247 | INFO     | transexitcode: 0
[2026-01-15 14:42:12] 2026-01-15 13:41:40,247 | INFO     | exeerrorcode: 0
[2026-01-15 14:42:12] 2026-01-15 13:41:40,247 | INFO     | exeerrordiag: 
[2026-01-15 14:42:12] 2026-01-15 13:41:40,248 | INFO     | exitcode: 0
[2026-01-15 14:42:12] 2026-01-15 13:41:40,248 | INFO     | exitmsg: OK
[2026-01-15 14:42:12] 2026-01-15 13:41:40,248 | INFO     | cpuconsumptiontime: 47163 s
[2026-01-15 14:42:12] 2026-01-15 13:41:40,248 | INFO     | nevents: 400
[2026-01-15 14:42:12] 2026-01-15 13:41:40,248 | INFO     | neventsw: 0
[2026-01-15 14:42:12] 2026-01-15 13:41:40,248 | INFO     | pid: 3482540
[2026-01-15 14:42:12] 2026-01-15 13:41:40,248 | INFO     | pgrp: 3482540
[2026-01-15 14:42:12] 2026-01-15 13:41:40,249 | INFO     | corecount: 12
[2026-01-15 14:42:12] 2026-01-15 13:41:40,249 | INFO     | event service: False
[2026-01-15 14:42:12] 2026-01-15 13:41:40,249 | INFO     | sizes: {0: 2283730, 1: 2283929, 6: 2284191, 12: 2284219, 4282: 2310079, 4283: 2319079, 4286: 2319263, 4295: 2319457}
[2026-01-15 14:42:12] 2026-01-15 13:41:40,249 | INFO     | --------------------------------------------------
[2026-01-15 14:42:12] 2026-01-15 13:41:40,249 | INFO     | 
[2026-01-15 14:42:12] 2026-01-15 13:41:40,250 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-01-15 14:42:12] 2026-01-15 13:41:40,269 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,270 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,270 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,270 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,271 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,273 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 14:42:12] 2026-01-15 13:41:40,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,273 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 14:42:12] 2026-01-15 13:41:40,273 | INFO     | job 6970285063 has completed (purged errors)
[2026-01-15 14:42:12] 2026-01-15 13:41:40,273 | INFO     | overall cleanup function is called
[2026-01-15 14:42:12] 2026-01-15 13:41:41,281 | INFO     | --- collectZombieJob: --- 10, [3482540]
[2026-01-15 14:42:12] 2026-01-15 13:41:41,282 | INFO     | zombie collector waiting for pid 3482540
[2026-01-15 14:42:12] 2026-01-15 13:41:41,282 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 14:42:12] 2026-01-15 13:41:41,282 | INFO     | collected zombie processes
[2026-01-15 14:42:12] 2026-01-15 13:41:41,282 | INFO     | will attempt to kill all subprocesses of pid=3482540
[2026-01-15 14:42:12] 2026-01-15 13:41:41,465 | INFO     | process IDs to be killed: [3482540] (in reverse order)
[2026-01-15 14:42:12] 2026-01-15 13:41:41,523 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 14:42:12] 2026-01-15 13:41:41,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 14:42:12] 2026-01-15 13:41:41,530 | INFO     | did not find any defunct processes belonging to 3482540
[2026-01-15 14:42:12] 2026-01-15 13:41:41,536 | INFO     | did not find any defunct processes belonging to 3482540
[2026-01-15 14:42:12] 2026-01-15 13:41:41,536 | INFO     | ready for new job
[2026-01-15 14:42:12] 2026-01-15 13:41:41,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 14:42:12] 2026-01-15 13:41:41,538 | INFO     | ***************************************
[2026-01-15 14:42:12] 2026-01-15 13:41:41,539 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 14:42:12] 2026-01-15 13:41:41,539 | INFO     | ***************************************
[2026-01-15 14:42:12] 2026-01-15 13:41:41,539 | INFO     | 
[2026-01-15 14:42:12] 2026-01-15 13:41:41,540 | INFO     | architecture information:
[2026-01-15 14:42:12] 2026-01-15 13:41:41,541 | INFO     | executing command: cat /etc/os-release
[2026-01-15 14:42:12] 2026-01-15 13:41:41,553 | INFO     | cat /etc/os-release:
[2026-01-15 14:42:12] NAME="CentOS Linux"
[2026-01-15 14:42:12] VERSION="7 (Core)"
[2026-01-15 14:42:12] ID="centos"
[2026-01-15 14:42:12] ID_LIKE="rhel fedora"
[2026-01-15 14:42:12] VERSION_ID="7"
[2026-01-15 14:42:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 14:42:12] ANSI_COLOR="0;31"
[2026-01-15 14:42:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 14:42:12] HOME_URL="https://www.centos.org/"
[2026-01-15 14:42:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 14:42:12] 
[2026-01-15 14:42:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 14:42:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 14:42:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 14:42:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 14:42:12] 
[2026-01-15 14:42:12] 2026-01-15 13:41:41,554 | INFO     | ***************************************
[2026-01-15 14:42:12] 2026-01-15 13:41:42,056 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-01-15 14:42:12] 2026-01-15 13:41:42,074 | INFO     | sufficient remaining disk space (229190402048 B)
[2026-01-15 14:42:12] 2026-01-15 13:41:42,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 14:42:12] 2026-01-15 13:41:42,075 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 14:42:12] 2026-01-15 13:41:42,075 | INFO     | update_server=False
[2026-01-15 14:42:12] 2026-01-15 13:41:42,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 14:42:12] 2026-01-15 13:41:42,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:42:12] 2026-01-15 13:41:42,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 14:42:12] 2026-01-15 13:41:42,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 14:42:12] 2026-01-15 13:41:42,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:42:12] 2026-01-15 13:41:42,315 | INFO     | aborting loop
[2026-01-15 14:42:12] 2026-01-15 13:41:42,425 | INFO     | all job control threads have been joined
[2026-01-15 14:42:12] 2026-01-15 13:41:42,627 | INFO     | all payload control threads have been joined
[2026-01-15 14:42:12] 2026-01-15 13:41:42,727 | INFO     | all data control threads have been joined
[2026-01-15 14:42:12] 2026-01-15 13:41:43,081 | INFO     | [job] retrieve thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:43,082 | INFO     | [job] queue monitor thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:43,257 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:43,320 | INFO     | [job] job monitor thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:43,356 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:43,430 | INFO     | [job] control thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:43,632 | INFO     | [payload] control thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:43,665 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:43,731 | INFO     | [data] control thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:43,772 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:44,082 | INFO     | [data] copytool_out thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:44,173 | INFO     | [job] validate thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:44,249 | INFO     | [data] copytool_in thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:44,393 | INFO     | [payload] failed_post thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:44,416 | INFO     | [payload] validate_post thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:46,082 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 14:42:12] 2026-01-15 13:41:54,569 | INFO     | [monitor] cgroup control has ended
[2026-01-15 14:42:12] 2026-01-15 13:41:56,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062031226688)>', '<ExcThread(monitor, started 140061341370112)>']
[2026-01-15 14:42:12] 2026-01-15 13:42:01,075 | INFO     | all workflow threads have been joined
[2026-01-15 14:42:12] 2026-01-15 13:42:01,075 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 14:42:12] 2026-01-15 13:42:01,076 | INFO     | traces error code: 0
[2026-01-15 14:42:12] 2026-01-15 13:42:01,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 14:42:12] 2026-01-15 13:42:12,410 | INFO     | PID=3474997 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 14:42:12] 2026-01-15 13:42:12,411 | INFO     | .. there are 2 such processes running
[2026-01-15 14:42:12] 2026-01-15 13:42:12,412 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 14:42:12] 2026-01-15 13:42:12,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 14:42:12] 2026-01-15 13:42:12,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 14:42:12] 2026-01-15 13:42:12,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 14:42:12] 2026-01-15 13:42:12,412 | INFO     | [monitor] control thread has ended
[2026-01-15 14:42:12] 2026-01-15 13:42:12,522 [wrapper] ==== pilot stdout END ====
[2026-01-15 14:42:12] 2026-01-15 13:42:12,524 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 14:42:12] 2026-01-15 13:42:12,527 [wrapper] pilotpid: 3474997
[2026-01-15 14:42:12] 2026-01-15 13:42:12,530 [wrapper] Pilot exit status: 0
[2026-01-15 14:42:12] 2026-01-15 13:42:12,539 [wrapper] pandaids: 6970285063
[2026-01-15 14:42:12] 2026-01-15 13:42:12,575 [wrapper] cleanup supervisor_pilot 3523573 3474998
[2026-01-15 14:42:12] 2026-01-15 13:42:12,578 [wrapper] Test setup, not cleaning
[2026-01-15 14:42:12] 2026-01-15 13:42:12,581 [wrapper] apfmon messages muted
[2026-01-15 14:42:12] 2026-01-15 13:42:12,583 [wrapper] ==== wrapper stdout END ====
[2026-01-15 14:42:12] 2026-01-15 13:42:12,586 [wrapper] ==== wrapper stderr END ====
[2026-01-15 14:42:12]  *** Error codes and diagnostics ***
[2026-01-15 14:42:12]     "exeErrorCode": 0,
[2026-01-15 14:42:12]     "exeErrorDiag": "",
[2026-01-15 14:42:12]     "pilotErrorCode": 0,
[2026-01-15 14:42:12]     "pilotErrorDiag": "",
[2026-01-15 14:42:12]  *** Listing of results directory ***
[2026-01-15 14:42:12] total 738208
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc    579449 Jan 15 04:00 pilot3.tar.gz
[2026-01-15 14:42:12] -rwx------ 1 boinc boinc     36322 Jan 15 04:04 runpilot2-wrapper.sh
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc      5112 Jan 15 04:05 queuedata.json
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc       100 Jan 15 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 14:42:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 13:29 run_atlas
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc       105 Jan 15 13:29 job.xml
[2026-01-15 14:42:12] -rw-r--r-- 2 boinc boinc 595623284 Jan 15 13:29 EVNT.32794306._000911.pool.root.1
[2026-01-15 14:42:12] -rw-r--r-- 2 boinc boinc     15847 Jan 15 13:29 start_atlas.sh
[2026-01-15 14:42:12] drwxrwx--x 2 boinc boinc        68 Jan 15 13:29 shared
[2026-01-15 14:42:12] -rw-r--r-- 2 boinc boinc    592414 Jan 15 13:29 input.tar.gz
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc      6294 Jan 15 13:29 init_data.xml
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc         0 Jan 15 13:29 boinc_lockfile
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc      2508 Jan 15 13:29 pandaJob.out
[2026-01-15 14:42:12] -rw------- 1 boinc boinc   1004221 Jan 15 13:29 agis_schedconf.cvmfs.json
[2026-01-15 14:42:12] -rw------- 1 boinc boinc   1516246 Jan 15 13:29 agis_ddmendpoints.agis.ALL.json
[2026-01-15 14:42:12] drwx------ 5 boinc boinc      4096 Jan 15 13:29 pilot3
[2026-01-15 14:42:12] -rw------- 1 boinc boinc 154324328 Jan 15 14:40 HITS.48215263._043249.pool.root.1
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc       530 Jan 15 14:41 boinc_task_state.xml
[2026-01-15 14:42:12] -rw------- 1 boinc boinc      1024 Jan 15 14:41 memory_monitor_summary.json
[2026-01-15 14:42:12] -rw------- 1 boinc boinc    394738 Jan 15 14:41 log.48215263._043249.job.log.tgz.1
[2026-01-15 14:42:12] -rw------- 1 boinc boinc      7802 Jan 15 14:41 heartbeat.json
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc        27 Jan 15 14:42 wrapper_checkpoint.txt
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc      8192 Jan 15 14:42 boinc_mmap_file
[2026-01-15 14:42:12] -rw------- 1 boinc boinc        95 Jan 15 14:42 pilot_heartbeat.json
[2026-01-15 14:42:12] -rw------- 1 boinc boinc       822 Jan 15 14:42 pilotlog.txt
[2026-01-15 14:42:12] -rw------- 1 boinc boinc    637896 Jan 15 14:42 log.48215263._043249.job.log.1
[2026-01-15 14:42:12] -rw------- 1 boinc boinc       357 Jan 15 14:42 output.list
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc       620 Jan 15 14:42 runtime_log
[2026-01-15 14:42:12] -rw------- 1 boinc boinc   1054720 Jan 15 14:42 result.tar.gz
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc      8857 Jan 15 14:42 runtime_log.err
[2026-01-15 14:42:12] -rw------- 1 boinc boinc       657 Jan 15 14:42 3qfNDmjpS08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2lnKDmSTPpHn.diag
[2026-01-15 14:42:12] -rw-r--r-- 1 boinc boinc     22456 Jan 15 14:42 stderr.txt
[2026-01-15 14:42:12] HITS file was successfully produced:
[2026-01-15 14:42:12] -rw------- 1 boinc boinc 154324328 Jan 15 14:40 shared/HITS.pool.root.1
[2026-01-15 14:42:12]  *** Contents of shared directory: ***
[2026-01-15 14:42:12] total 734000
[2026-01-15 14:42:12] -rw-r--r-- 2 boinc boinc 595623284 Jan 15 13:29 ATLAS.root_0
[2026-01-15 14:42:12] -rw-r--r-- 2 boinc boinc     15847 Jan 15 13:29 start_atlas.sh
[2026-01-15 14:42:12] -rw-r--r-- 2 boinc boinc    592414 Jan 15 13:29 input.tar.gz
[2026-01-15 14:42:12] -rw------- 1 boinc boinc 154324328 Jan 15 14:40 HITS.pool.root.1
[2026-01-15 14:42:12] -rw------- 1 boinc boinc   1054720 Jan 15 14:42 result.tar.gz
14:42:14 (3471152): run_atlas exited; CPU time 47223.639571
14:42:14 (3471152): called boinc_finish(0)

</stderr_txt>
]]>

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