Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:18:30 (793157): wrapper (7.7.26015): starting
20:18:30 (793157): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 20:18:30] Arguments: --nthreads 3
[2026-01-15 20:18:30] Threads: 3
[2026-01-15 20:18:30] Checking for CVMFS
[2026-01-15 20:18:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 20:18:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 20:18:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 20:18:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 20:18:31] 2.13.3.0 719790 236 52856 155167 0 56 15137009 15728640 0 130560 0 231280 99.992 11047 20 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-15 20:18:31] CVMFS is ok
[2026-01-15 20:18:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 20:18:31] Checking for apptainer binary...
[2026-01-15 20:18:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 20:18:31] Running /usr/bin/apptainer --version
[2026-01-15 20:18:31] apptainer version 1.4.5-2.el9
[2026-01-15 20:18:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 20:18:31] testio003
[2026-01-15 20:18:31] apptainer works
[2026-01-15 20:18:31] Set ATHENA_PROC_NUMBER=3
[2026-01-15 20:18:31] Set ATHENA_CORE_NUMBER=3
[2026-01-15 20:18:31] Starting ATLAS job with PandaID=6970457559
[2026-01-15 20:18:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 21:38:36]  *** The last 200 lines of the pilot log: ***
[2026-01-15 21:38:36] 2026-01-15 12:37:39,012 | INFO     | monitor loop #369: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:37:39,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:37:39,346 | INFO     | time since job start (4720s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:41,351 | INFO     | time since job start (4722s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:41,514 | INFO     | monitor loop #370: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:37:41,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:37:43,356 | INFO     | time since job start (4724s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:44,017 | INFO     | monitor loop #371: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:37:44,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:37:45,361 | INFO     | time since job start (4726s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:46,519 | INFO     | monitor loop #372: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:37:46,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:37:47,366 | INFO     | time since job start (4728s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:49,022 | INFO     | monitor loop #373: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:37:49,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:37:49,371 | INFO     | time since job start (4730s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:51,377 | INFO     | time since job start (4732s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:51,525 | INFO     | monitor loop #374: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:37:51,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:37:53,382 | INFO     | time since job start (4734s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:54,027 | INFO     | monitor loop #375: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:37:54,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:37:55,387 | INFO     | time since job start (4736s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:56,432 | INFO     | PID=796835 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 21:38:36] 2026-01-15 12:37:56,529 | INFO     | monitor loop #376: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:37:56,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:37:57,432 | INFO     | time since job start (4738s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:37:59,032 | INFO     | monitor loop #377: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:37:59,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:37:59,437 | INFO     | time since job start (4740s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:38:01,442 | INFO     | time since job start (4742s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:38:01,534 | INFO     | monitor loop #378: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:38:01,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:38:03,447 | INFO     | time since job start (4744s) is within the limit (349056.0s)
[2026-01-15 21:38:36] 2026-01-15 12:38:04,036 | INFO     | monitor loop #379: job 0:6970457559 is in state 'finished'
[2026-01-15 21:38:36] 2026-01-15 12:38:04,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:38:36] 2026-01-15 12:38:04,714 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 21:38:36] 2026-01-15 12:38:04,715 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3685.6825
[2026-01-15 21:38:36] 2026-01-15 12:38:04,715 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6970457559/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 21:38:36] 2026-01-15 12:38:04,716 | INFO     | extracted standard info from prmon json
[2026-01-15 21:38:36] 2026-01-15 12:38:04,716 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 21:38:36] 2026-01-15 12:38:04,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 21:38:36] 2026-01-15 12:38:04,716 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 21:38:36] 2026-01-15 12:38:04,716 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 21:38:36] 2026-01-15 12:38:04,717 | INFO     | fitting pss+swap vs Time
[2026-01-15 21:38:36] 2026-01-15 12:38:04,717 | INFO     | sum of square deviations: 101847438.86956538
[2026-01-15 21:38:36] 2026-01-15 12:38:04,717 | INFO     | sum of deviations: -12708813286.130436
[2026-01-15 21:38:36] 2026-01-15 12:38:04,717 | INFO     | mean x: 1768478343.0434783
[2026-01-15 21:38:36] 2026-01-15 12:38:04,717 | INFO     | mean y: 2503981.0434782607
[2026-01-15 21:38:36] 2026-01-15 12:38:04,717 | INFO     | intersect: 220678264822.59644
[2026-01-15 21:38:36] 2026-01-15 12:38:04,717 | INFO     | chi2: 0.14810554119618666
[2026-01-15 21:38:36] 2026-01-15 12:38:04,717 | INFO     | current memory leak: -124.78 B/s (using 69 data points, chi2=0.15)
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | could have reported an average CPU frequency of 3648 MHz (6 samples)
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | ..............................
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | . Timing measurements:
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | . get job = 0 s
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | . initial setup = 6 s
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | . payload setup = 5 s
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | . stage-in = 0 s
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | . payload execution = 4634 s
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | . stage-out = 0 s
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | . log creation = 0 s
[2026-01-15 21:38:36] 2026-01-15 12:38:04,718 | INFO     | ..............................
[2026-01-15 21:38:36] 2026-01-15 12:38:04,932 | INFO     | 
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | job summary report
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | --------------------------------------------------
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | PanDA job id: 6970457559
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | task id: 48215263
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | errors: (none)
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | pilot state: finished 
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | transexitcode: 0
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | exeerrorcode: 0
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | exeerrordiag: 
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | exitcode: 0
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | exitmsg: OK
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | cpuconsumptiontime: 12840 s
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | nevents: 400
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | neventsw: 0
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | pid: 803367
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | pgrp: 803367
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | corecount: 3
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | event service: False
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | sizes: {0: 2283951, 4: 2284213, 11: 2284241, 4644: 2310436, 4646: 2319434, 4648: 2319490, 4731: 2319812}
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | --------------------------------------------------
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | 
[2026-01-15 21:38:36] 2026-01-15 12:38:04,933 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-15 21:38:36] 2026-01-15 12:38:04,943 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,943 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,943 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | job 6970457559 has completed (purged errors)
[2026-01-15 21:38:36] 2026-01-15 12:38:04,944 | INFO     | overall cleanup function is called
[2026-01-15 21:38:36] 2026-01-15 12:38:05,950 | INFO     | --- collectZombieJob: --- 10, [803367]
[2026-01-15 21:38:36] 2026-01-15 12:38:05,950 | INFO     | zombie collector waiting for pid 803367
[2026-01-15 21:38:36] 2026-01-15 12:38:05,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 21:38:36] 2026-01-15 12:38:05,950 | INFO     | collected zombie processes
[2026-01-15 21:38:36] 2026-01-15 12:38:05,950 | INFO     | will attempt to kill all subprocesses of pid=803367
[2026-01-15 21:38:36] 2026-01-15 12:38:05,982 | INFO     | process IDs to be killed: [803367] (in reverse order)
[2026-01-15 21:38:36] 2026-01-15 12:38:06,001 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 21:38:36] 2026-01-15 12:38:06,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 21:38:36] 2026-01-15 12:38:06,002 | INFO     | did not find any defunct processes belonging to 803367
[2026-01-15 21:38:36] 2026-01-15 12:38:06,003 | INFO     | did not find any defunct processes belonging to 803367
[2026-01-15 21:38:36] 2026-01-15 12:38:06,003 | INFO     | ready for new job
[2026-01-15 21:38:36] 2026-01-15 12:38:06,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 21:38:36] 2026-01-15 12:38:06,004 | INFO     | ***************************************
[2026-01-15 21:38:36] 2026-01-15 12:38:06,004 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 21:38:36] 2026-01-15 12:38:06,004 | INFO     | ***************************************
[2026-01-15 21:38:36] 2026-01-15 12:38:06,004 | INFO     | 
[2026-01-15 21:38:36] 2026-01-15 12:38:06,004 | INFO     | architecture information:
[2026-01-15 21:38:36] 2026-01-15 12:38:06,005 | INFO     | executing command: cat /etc/os-release
[2026-01-15 21:38:36] 2026-01-15 12:38:06,012 | INFO     | cat /etc/os-release:
[2026-01-15 21:38:36] NAME="CentOS Linux"
[2026-01-15 21:38:36] VERSION="7 (Core)"
[2026-01-15 21:38:36] ID="centos"
[2026-01-15 21:38:36] ID_LIKE="rhel fedora"
[2026-01-15 21:38:36] VERSION_ID="7"
[2026-01-15 21:38:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 21:38:36] ANSI_COLOR="0;31"
[2026-01-15 21:38:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 21:38:36] HOME_URL="https://www.centos.org/"
[2026-01-15 21:38:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 21:38:36] 
[2026-01-15 21:38:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 21:38:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 21:38:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 21:38:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 21:38:36] 
[2026-01-15 21:38:36] 2026-01-15 12:38:06,012 | INFO     | ***************************************
[2026-01-15 21:38:36] 2026-01-15 12:38:06,514 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-15 21:38:36] 2026-01-15 12:38:06,522 | INFO     | sufficient remaining disk space (47286583296 B)
[2026-01-15 21:38:36] 2026-01-15 12:38:06,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 21:38:36] 2026-01-15 12:38:06,522 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 21:38:36] 2026-01-15 12:38:06,522 | INFO     | update_server=False
[2026-01-15 21:38:36] 2026-01-15 12:38:06,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 21:38:36] 2026-01-15 12:38:06,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 21:38:36] 2026-01-15 12:38:06,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 21:38:36] 2026-01-15 12:38:06,539 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 21:38:36] 2026-01-15 12:38:06,539 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 21:38:36] 2026-01-15 12:38:06,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 21:38:36] 2026-01-15 12:38:06,539 | INFO     | will abort loop
[2026-01-15 21:38:36] 2026-01-15 12:38:06,646 | INFO     | all payload control threads have been joined
[2026-01-15 21:38:36] 2026-01-15 12:38:06,858 | INFO     | [monitor] cgroup control has ended
[2026-01-15 21:38:36] 2026-01-15 12:38:07,046 | INFO     | all data control threads have been joined
[2026-01-15 21:38:36] 2026-01-15 12:38:07,528 | INFO     | [job] retrieve thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:07,528 | INFO     | [job] queue monitor thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:07,544 | INFO     | [job] job monitor thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:07,562 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:07,585 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:07,651 | INFO     | [payload] control thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:07,657 | INFO     | all job control threads have been joined
[2026-01-15 21:38:36] 2026-01-15 12:38:07,835 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:08,051 | INFO     | [data] control thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:08,361 | INFO     | [payload] failed_post thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:08,444 | INFO     | [data] copytool_in thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:08,528 | INFO     | [data] copytool_out thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:08,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 21:38:36] 2026-01-15 12:38:08,662 | INFO     | [job] control thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:08,959 | INFO     | [job] validate thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:08,998 | INFO     | [payload] validate_post thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:12,601 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:17,444 | INFO     | job.realtimelogging is not enabled
[2026-01-15 21:38:36] 2026-01-15 12:38:18,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 21:38:36] 2026-01-15 12:38:20,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139783473567552)>', '<ExcThread(monitor, started 139783116412672)>']
[2026-01-15 21:38:36] 2026-01-15 12:38:25,167 | INFO     | all workflow threads have been joined
[2026-01-15 21:38:36] 2026-01-15 12:38:25,168 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 21:38:36] 2026-01-15 12:38:25,168 | INFO     | traces error code: 0
[2026-01-15 21:38:36] 2026-01-15 12:38:25,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 21:38:36] 2026-01-15 12:38:36,547 | INFO     | PID=796835 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 21:38:36] 2026-01-15 12:38:36,548 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 21:38:36] 2026-01-15 12:38:36,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 21:38:36] 2026-01-15 12:38:36,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 21:38:36] 2026-01-15 12:38:36,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 21:38:36] 2026-01-15 12:38:36,548 | INFO     | [monitor] control thread has ended
[2026-01-15 21:38:36] 2026-01-15 12:38:36,607 [wrapper] ==== pilot stdout END ====
[2026-01-15 21:38:36] 2026-01-15 12:38:36,608 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 21:38:36] 2026-01-15 12:38:36,610 [wrapper] pilotpid: 796835
[2026-01-15 21:38:36] 2026-01-15 12:38:36,612 [wrapper] Pilot exit status: 0
[2026-01-15 21:38:36] 2026-01-15 12:38:36,617 [wrapper] pandaids: 6970457559
[2026-01-15 21:38:36] 2026-01-15 12:38:36,629 [wrapper] cleanup supervisor_pilot  814958 796836
[2026-01-15 21:38:36] 2026-01-15 12:38:36,631 [wrapper] Test setup, not cleaning
[2026-01-15 21:38:36] 2026-01-15 12:38:36,632 [wrapper] apfmon messages muted
[2026-01-15 21:38:36] 2026-01-15 12:38:36,634 [wrapper] ==== wrapper stdout END ====
[2026-01-15 21:38:36] 2026-01-15 12:38:36,636 [wrapper] ==== wrapper stderr END ====
[2026-01-15 21:38:36]  *** Error codes and diagnostics ***
[2026-01-15 21:38:36]     "exeErrorCode": 0,
[2026-01-15 21:38:36]     "exeErrorDiag": "",
[2026-01-15 21:38:36]     "pilotErrorCode": 0,
[2026-01-15 21:38:36]     "pilotErrorDiag": "",
[2026-01-15 21:38:36]  *** Listing of results directory ***
[2026-01-15 21:38:36] total 740688
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc    579449 Jan 15 15:52 pilot3.tar.gz
[2026-01-15 21:38:36] -rwx------. 1 boinc boinc     36322 Jan 15 15:56 runpilot2-wrapper.sh
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc      5112 Jan 15 16:00 queuedata.json
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc       100 Jan 15 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 21:38:36] -rwxr-xr-x. 1 boinc boinc      7986 Jan 15 20:18 run_atlas
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc       105 Jan 15 20:18 job.xml
[2026-01-15 21:38:36] -rw-r--r--. 2 boinc boinc 597692452 Jan 15 20:18 EVNT.32794306._001914.pool.root.1
[2026-01-15 21:38:36] -rw-r--r--. 2 boinc boinc     15847 Jan 15 20:18 start_atlas.sh
[2026-01-15 21:38:36] drwxrwx--x. 2 boinc boinc        68 Jan 15 20:18 shared
[2026-01-15 21:38:36] -rw-r--r--. 2 boinc boinc    592402 Jan 15 20:18 input.tar.gz
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc      9407 Jan 15 20:18 init_data.xml
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc         0 Jan 15 20:18 boinc_lockfile
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc      2508 Jan 15 20:18 pandaJob.out
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc   1004126 Jan 15 20:18 agis_schedconf.cvmfs.json
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc   1516246 Jan 15 20:18 agis_ddmendpoints.agis.ALL.json
[2026-01-15 21:38:36] drwx------. 5 boinc boinc      4096 Jan 15 20:18 pilot3
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc 154967336 Jan 15 21:36 HITS.48215263._049320.pool.root.1
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc      1014 Jan 15 21:36 memory_monitor_summary.json
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc       530 Jan 15 21:36 boinc_task_state.xml
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc    259080 Jan 15 21:36 log.48215263._049320.job.log.tgz.1
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc      7763 Jan 15 21:38 heartbeat.json
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc      8192 Jan 15 21:38 boinc_mmap_file
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc        27 Jan 15 21:38 wrapper_checkpoint.txt
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc        95 Jan 15 21:38 pilot_heartbeat.json
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc       746 Jan 15 21:38 pilotlog.txt
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc    685722 Jan 15 21:38 log.48215263._049320.job.log.1
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc       357 Jan 15 21:38 output.list
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc       620 Jan 15 21:38 runtime_log
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc    962560 Jan 15 21:38 result.tar.gz
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc      8775 Jan 15 21:38 runtime_log.err
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc       643 Jan 15 21:38 lC1NDmjSW08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnRoKDm1GUKom.diag
[2026-01-15 21:38:36] -rw-r--r--. 1 boinc boinc     22038 Jan 15 21:38 stderr.txt
[2026-01-15 21:38:36] HITS file was successfully produced:
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc 154967336 Jan 15 21:36 shared/HITS.pool.root.1
[2026-01-15 21:38:36]  *** Contents of shared directory: ***
[2026-01-15 21:38:36] total 736560
[2026-01-15 21:38:36] -rw-r--r--. 2 boinc boinc 597692452 Jan 15 20:18 ATLAS.root_0
[2026-01-15 21:38:36] -rw-r--r--. 2 boinc boinc     15847 Jan 15 20:18 start_atlas.sh
[2026-01-15 21:38:36] -rw-r--r--. 2 boinc boinc    592402 Jan 15 20:18 input.tar.gz
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc 154967336 Jan 15 21:36 HITS.pool.root.1
[2026-01-15 21:38:36] -rw-------. 1 boinc boinc    962560 Jan 15 21:38 result.tar.gz
21:38:38 (793157): run_atlas exited; CPU time 12846.832445
21:38:38 (793157): called boinc_finish(0)

</stderr_txt>
]]>

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