Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:00:11 (46640): wrapper (7.7.26015): starting
06:00:11 (46640): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 06:00:11] Arguments: --nthreads 8
[2026-01-15 06:00:11] Threads: 8
[2026-01-15 06:00:11] Checking for CVMFS
[2026-01-15 06:00:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 06:00:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 06:00:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 06:00:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 06:00:12] 2.11.2.0 5808 242284 112216 155165 3 187 15951823 18432000 1882 130560 0 173653944 99.958 12070663 8153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-15 06:00:12] CVMFS is ok
[2026-01-15 06:00:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 06:00:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 06:00:12] Further information can be found at the LHC@home message board.
[2026-01-15 06:00:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 06:00:12] Checking for apptainer binary...
[2026-01-15 06:00:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 06:00:12] Running /usr/bin/apptainer --version
[2026-01-15 06:00:12] apptainer version 1.3.2-1.el7
[2026-01-15 06:00:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 06:00:12] c-9-34.aglt2.org
[2026-01-15 06:00:12] apptainer works
[2026-01-15 06:00:12] Set ATHENA_PROC_NUMBER=8
[2026-01-15 06:00:12] Set ATHENA_CORE_NUMBER=8
[2026-01-15 06:00:12] Starting ATLAS job with PandaID=6970457532
[2026-01-15 06:00:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 07:44:38]  *** The last 200 lines of the pilot log: ***
[2026-01-15 07:44:38] 2026-01-15 12:43:45,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 07:44:38] 2026-01-15 12:43:45,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 07:44:38] 2026-01-15 12:43:45,996 | INFO     | fitting pss+swap vs Time
[2026-01-15 07:44:38] 2026-01-15 12:43:45,996 | INFO     | sum of square deviations: 329031285.5
[2026-01-15 07:44:38] 2026-01-15 12:43:45,997 | INFO     | sum of deviations: 6754513225.000004
[2026-01-15 07:44:38] 2026-01-15 12:43:45,997 | INFO     | mean x: 1768477924.5
[2026-01-15 07:44:38] 2026-01-15 12:43:45,997 | INFO     | mean y: 2457892.4509803923
[2026-01-15 07:44:38] 2026-01-15 12:43:45,997 | INFO     | intersect: -36301711515.0378
[2026-01-15 07:44:38] 2026-01-15 12:43:45,997 | INFO     | chi2: 1.9601508281281732
[2026-01-15 07:44:38] 2026-01-15 12:43:45,998 | INFO     | sum of square deviations: 282974608.0
[2026-01-15 07:44:38] 2026-01-15 12:43:45,998 | INFO     | sum of deviations: 12930074230.000002
[2026-01-15 07:44:38] 2026-01-15 12:43:45,998 | INFO     | mean x: 1768477772.0
[2026-01-15 07:44:38] 2026-01-15 12:43:45,998 | INFO     | mean y: 2477447.649484536
[2026-01-15 07:44:38] 2026-01-15 12:43:45,998 | INFO     | intersect: -80805299008.62187
[2026-01-15 07:44:38] 2026-01-15 12:43:45,999 | INFO     | chi2: 1.173824447383741
[2026-01-15 07:44:38] 2026-01-15 12:43:45,999 | INFO     | current chi2=1.173824447383741 (change=40.115605873825885 %)
[2026-01-15 07:44:38] 2026-01-15 12:43:45,999 | INFO     | sum of square deviations: 241429643.0
[2026-01-15 07:44:38] 2026-01-15 12:43:45,999 | INFO     | sum of deviations: 12176370369.0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,000 | INFO     | mean x: 1768477619.5
[2026-01-15 07:44:38] 2026-01-15 12:43:46,000 | INFO     | mean y: 2474678.586956522
[2026-01-15 07:44:38] 2026-01-15 12:43:46,000 | INFO     | intersect: -89189714883.31973
[2026-01-15 07:44:38] 2026-01-15 12:43:46,000 | INFO     | chi2: 1.1755489468793126
[2026-01-15 07:44:38] 2026-01-15 12:43:46,000 | INFO     | current chi2=1.1755489468793126 (change=-0.1469128965080981 %)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,000 | INFO     | right removable region: 91
[2026-01-15 07:44:38] 2026-01-15 12:43:46,001 | INFO     | sum of square deviations: 282974608.0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,001 | INFO     | sum of deviations: -5268085721.0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,001 | INFO     | mean x: 1768478077.0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,001 | INFO     | mean y: 2496629.907216495
[2026-01-15 07:44:38] 2026-01-15 12:43:46,001 | INFO     | intersect: 32925924534.594826
[2026-01-15 07:44:38] 2026-01-15 12:43:46,002 | INFO     | chi2: 0.8201416210543373
[2026-01-15 07:44:38] 2026-01-15 12:43:46,002 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6970457532: 3967630 B (within 4404019200 B limit)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,002 | INFO     | current chi2=0.8201416210543373 (change=58.1592595179258 %)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,002 | INFO     | sum of square deviations: 241429643.0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,002 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6970457532/HITS.48215263._049293.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,003 | INFO     | sum of deviations: -4807694504.0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,003 | INFO     | total size of present files: 0 B (workdir size: 3967630 B)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,003 | INFO     | mean x: 1768478229.5
[2026-01-15 07:44:38] 2026-01-15 12:43:46,003 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6970457532/HITS.48215263._049293.pool.root.1 since it does not exist
[2026-01-15 07:44:38] 2026-01-15 12:43:46,003 | INFO     | mean y: 2494975.934782609
[2026-01-15 07:44:38] 2026-01-15 12:43:46,004 | INFO     | intersect: 35218978580.68749
[2026-01-15 07:44:38] 2026-01-15 12:43:46,004 | INFO     | chi2: 0.8202714791966625
[2026-01-15 07:44:38] 2026-01-15 12:43:46,004 | INFO     | current chi2=0.8202714791966625 (change=-0.015833624217035297 %)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,004 | INFO     | left removable region: 20
[2026-01-15 07:44:38] 2026-01-15 12:43:46,004 | INFO     | sum of square deviations: 110960220.0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,005 | INFO     | sum of deviations: 690291799.0000001
[2026-01-15 07:44:38] 2026-01-15 12:43:46,005 | INFO     | mean x: 1768478199.0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,005 | INFO     | mean y: 2520847.084507042
[2026-01-15 07:44:38] 2026-01-15 12:43:46,005 | INFO     | intersect: -10999313841.779577
[2026-01-15 07:44:38] 2026-01-15 12:43:46,005 | INFO     | chi2: 0.00012963332195778585
[2026-01-15 07:44:38] 2026-01-15 12:43:46,005 | INFO     | current memory leak: 6.22 B/s (using 71 data points, chi2=0.00)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,006 | INFO     | could have reported an average CPU frequency of 3005 MHz (7 samples)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,006 | INFO     | ..............................
[2026-01-15 07:44:38] 2026-01-15 12:43:46,006 | INFO     | . Timing measurements:
[2026-01-15 07:44:38] 2026-01-15 12:43:46,006 | INFO     | . get job = 0 s
[2026-01-15 07:44:38] 2026-01-15 12:43:46,006 | INFO     | . initial setup = 2 s
[2026-01-15 07:44:38] 2026-01-15 12:43:46,006 | INFO     | . payload setup = 4 s
[2026-01-15 07:44:38] 2026-01-15 12:43:46,006 | INFO     | . stage-in = 0 s
[2026-01-15 07:44:38] 2026-01-15 12:43:46,007 | INFO     | . payload execution = 6174 s
[2026-01-15 07:44:38] 2026-01-15 12:43:46,007 | INFO     | . stage-out = 0 s
[2026-01-15 07:44:38] 2026-01-15 12:43:46,007 | INFO     | . log creation = 0 s
[2026-01-15 07:44:38] 2026-01-15 12:43:46,007 | INFO     | ..............................
[2026-01-15 07:44:38] 2026-01-15 12:43:46,209 | INFO     | number of running child processes to parent process 9301: 1
[2026-01-15 07:44:38] 2026-01-15 12:43:46,210 | INFO     | maximum number of monitored processes: 6
[2026-01-15 07:44:38] 2026-01-15 12:43:46,210 | INFO     | aborting job monitoring since job object (job id=6970457532) has expired
[2026-01-15 07:44:38] 2026-01-15 12:43:46,411 | INFO     | 
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | job summary report
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | --------------------------------------------------
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | PanDA job id: 6970457532
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | task id: 48215263
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | errors: (none)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | pilot state: finished 
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | transexitcode: 0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | exeerrorcode: 0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | exeerrordiag: 
[2026-01-15 07:44:38] 2026-01-15 12:43:46,412 | INFO     | exitcode: 0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | exitmsg: OK
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | cpuconsumptiontime: 46456 s
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | nevents: 400
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | neventsw: 0
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | pid: 9301
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | pgrp: 9301
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | corecount: 8
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | event service: False
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | sizes: {0: 2283951, 3: 2284213, 11: 2284241, 6182: 2311078, 6183: 2311077, 6184: 2320131, 6186: 2320315, 6190: 2320537}
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | --------------------------------------------------
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | 
[2026-01-15 07:44:38] 2026-01-15 12:43:46,413 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-15 07:44:38] 2026-01-15 12:43:46,425 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 07:44:38] 2026-01-15 12:43:46,427 | INFO     | job 6970457532 has completed (purged errors)
[2026-01-15 07:44:38] 2026-01-15 12:43:46,428 | INFO     | overall cleanup function is called
[2026-01-15 07:44:38] 2026-01-15 12:43:47,435 | INFO     | --- collectZombieJob: --- 10, [9301]
[2026-01-15 07:44:38] 2026-01-15 12:43:47,435 | INFO     | zombie collector waiting for pid 9301
[2026-01-15 07:44:38] 2026-01-15 12:43:47,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 07:44:38] 2026-01-15 12:43:47,435 | INFO     | collected zombie processes
[2026-01-15 07:44:38] 2026-01-15 12:43:47,435 | INFO     | will attempt to kill all subprocesses of pid=9301
[2026-01-15 07:44:38] 2026-01-15 12:43:47,574 | INFO     | process IDs to be killed: [9301] (in reverse order)
[2026-01-15 07:44:38] 2026-01-15 12:43:47,621 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 07:44:38] 2026-01-15 12:43:47,621 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 07:44:38] 2026-01-15 12:43:47,625 | INFO     | did not find any defunct processes belonging to 9301
[2026-01-15 07:44:38] 2026-01-15 12:43:47,628 | INFO     | did not find any defunct processes belonging to 9301
[2026-01-15 07:44:38] 2026-01-15 12:43:47,628 | INFO     | ready for new job
[2026-01-15 07:44:38] 2026-01-15 12:43:47,629 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 07:44:38] 2026-01-15 12:43:47,630 | INFO     | ***************************************
[2026-01-15 07:44:38] 2026-01-15 12:43:47,630 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 07:44:38] 2026-01-15 12:43:47,630 | INFO     | ***************************************
[2026-01-15 07:44:38] 2026-01-15 12:43:47,630 | INFO     | 
[2026-01-15 07:44:38] 2026-01-15 12:43:47,631 | INFO     | architecture information:
[2026-01-15 07:44:38] 2026-01-15 12:43:47,631 | INFO     | executing command: cat /etc/os-release
[2026-01-15 07:44:38] 2026-01-15 12:43:47,640 | INFO     | cat /etc/os-release:
[2026-01-15 07:44:38] NAME="CentOS Linux"
[2026-01-15 07:44:38] VERSION="7 (Core)"
[2026-01-15 07:44:38] ID="centos"
[2026-01-15 07:44:38] ID_LIKE="rhel fedora"
[2026-01-15 07:44:38] VERSION_ID="7"
[2026-01-15 07:44:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 07:44:38] ANSI_COLOR="0;31"
[2026-01-15 07:44:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 07:44:38] HOME_URL="https://www.centos.org/"
[2026-01-15 07:44:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 07:44:38] 
[2026-01-15 07:44:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 07:44:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 07:44:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 07:44:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 07:44:38] 
[2026-01-15 07:44:38] 2026-01-15 12:43:47,640 | INFO     | ***************************************
[2026-01-15 07:44:38] 2026-01-15 12:43:48,143 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-15 07:44:38] 2026-01-15 12:43:48,154 | INFO     | sufficient remaining disk space (101911101440 B)
[2026-01-15 07:44:38] 2026-01-15 12:43:48,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 07:44:38] 2026-01-15 12:43:48,154 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 07:44:38] 2026-01-15 12:43:48,154 | INFO     | update_server=False
[2026-01-15 07:44:38] 2026-01-15 12:43:48,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 07:44:38] 2026-01-15 12:43:48,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 07:44:38] 2026-01-15 12:43:48,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 07:44:38] 2026-01-15 12:43:48,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 07:44:38] 2026-01-15 12:43:48,155 | INFO     | aborting loop
[2026-01-15 07:44:38] 2026-01-15 12:43:48,300 | INFO     | all payload control threads have been joined
[2026-01-15 07:44:38] 2026-01-15 12:43:48,851 | INFO     | all data control threads have been joined
[2026-01-15 07:44:38] 2026-01-15 12:43:49,160 | INFO     | [job] retrieve thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:49,160 | INFO     | [job] job monitor thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:49,304 | INFO     | [payload] control thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:49,338 | INFO     | [payload] validate_post thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:49,500 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:49,528 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:49,555 | INFO     | all job control threads have been joined
[2026-01-15 07:44:38] 2026-01-15 12:43:49,856 | INFO     | [data] control thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:49,873 | INFO     | [data] copytool_in thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:49,873 | INFO     | [payload] failed_post thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:50,108 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:50,156 | INFO     | [data] copytool_out thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:50,198 | INFO     | [job] validate thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:50,560 | INFO     | [job] control thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:51,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 07:44:38] 2026-01-15 12:43:52,087 | INFO     | [job] queue monitor thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:52,160 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:43:58,309 | INFO     | job.realtimelogging is not enabled
[2026-01-15 07:44:38] 2026-01-15 12:43:59,314 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 07:44:38] 2026-01-15 12:44:17,893 | INFO     | PID=1494 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-15 07:44:38] 2026-01-15 12:44:17,893 | INFO     | .. there are 4 such processes running
[2026-01-15 07:44:38] 2026-01-15 12:44:17,894 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 07:44:38] 2026-01-15 12:44:17,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 07:44:38] 2026-01-15 12:44:17,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 07:44:38] 2026-01-15 12:44:32,600 | INFO     | [monitor] cgroup control has ended
[2026-01-15 07:44:38] 2026-01-15 12:44:33,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781072377664)>', '<ExcThread(monitor, started 139780465596160)>']
[2026-01-15 07:44:38] 2026-01-15 12:44:33,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 07:44:38] 2026-01-15 12:44:33,974 | INFO     | [monitor] control thread has ended
[2026-01-15 07:44:38] 2026-01-15 12:44:38,221 | INFO     | all workflow threads have been joined
[2026-01-15 07:44:38] 2026-01-15 12:44:38,222 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 07:44:38] 2026-01-15 12:44:38,222 | INFO     | traces error code: 0
[2026-01-15 07:44:38] 2026-01-15 12:44:38,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 07:44:38] 2026-01-15 12:44:38,318 [wrapper] ==== pilot stdout END ====
[2026-01-15 07:44:38] 2026-01-15 12:44:38,320 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 07:44:38] 2026-01-15 12:44:38,322 [wrapper] pilotpid: 1494
[2026-01-15 07:44:38] 2026-01-15 12:44:38,324 [wrapper] Pilot exit status: 0
[2026-01-15 07:44:38] 2026-01-15 12:44:38,330 [wrapper] pandaids: 6970457532
[2026-01-15 07:44:38] 2026-01-15 12:44:38,364 [wrapper] cleanup supervisor_pilot 37655 1495
[2026-01-15 07:44:38] 2026-01-15 12:44:38,366 [wrapper] Test setup, not cleaning
[2026-01-15 07:44:38] 2026-01-15 12:44:38,369 [wrapper] apfmon messages muted
[2026-01-15 07:44:38] 2026-01-15 12:44:38,370 [wrapper] ==== wrapper stdout END ====
[2026-01-15 07:44:38] 2026-01-15 12:44:38,372 [wrapper] ==== wrapper stderr END ====
[2026-01-15 07:44:38]  *** Error codes and diagnostics ***
[2026-01-15 07:44:38]     "exeErrorCode": 0,
[2026-01-15 07:44:38]     "exeErrorDiag": "",
[2026-01-15 07:44:38]     "pilotErrorCode": 0,
[2026-01-15 07:44:38]     "pilotErrorDiag": "",
[2026-01-15 07:44:38]  *** Listing of results directory ***
[2026-01-15 07:44:38] total 727924
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 07:44:38] -rwx------ 1 boincer umatlas     36322 Jan 15 01:56 runpilot2-wrapper.sh
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 02:00 queuedata.json
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas       100 Jan 15 06:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 07:44:38] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 06:00 run_atlas
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas       105 Jan 15 06:00 job.xml
[2026-01-15 07:44:38] -rw-r--r-- 2 boincer umatlas 590474318 Jan 15 06:00 EVNT.32794306._001913.pool.root.1
[2026-01-15 07:44:38] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 06:00 start_atlas.sh
[2026-01-15 07:44:38] drwxrwx--x 2 boincer umatlas      4096 Jan 15 06:00 shared
[2026-01-15 07:44:38] -rw-r--r-- 2 boincer umatlas    592410 Jan 15 06:00 input.tar.gz
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas         0 Jan 15 06:00 boinc_lockfile
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas      2508 Jan 15 06:00 pandaJob.out
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas        57 Jan 15 06:00 setup.sh.local
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas   1007559 Jan 15 06:00 agis_schedconf.cvmfs.json
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas   1516246 Jan 15 06:00 agis_ddmendpoints.agis.ALL.json
[2026-01-15 07:44:38] drwx------ 5 boincer umatlas      4096 Jan 15 06:00 pilot3
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas      6035 Jan 15 07:38 init_data.xml
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas 148497622 Jan 15 07:43 HITS.48215263._049293.pool.root.1
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas       530 Jan 15 07:43 boinc_task_state.xml
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas      1046 Jan 15 07:43 memory_monitor_summary.json
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas    361162 Jan 15 07:43 log.48215263._049293.job.log.tgz.1
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas      7843 Jan 15 07:43 heartbeat.json
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas        95 Jan 15 07:44 pilot_heartbeat.json
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 07:44 boinc_mmap_file
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas        27 Jan 15 07:44 wrapper_checkpoint.txt
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas      4893 Jan 15 07:44 pilotlog.txt
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas    882475 Jan 15 07:44 log.48215263._049293.job.log.1
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas       357 Jan 15 07:44 output.list
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas       620 Jan 15 07:44 runtime_log
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas   1259520 Jan 15 07:44 result.tar.gz
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas      9332 Jan 15 07:44 runtime_log.err
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas       656 Jan 15 07:44 11SNDmjSW08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNRoKDmvto1Wo.diag
[2026-01-15 07:44:38] -rw-r--r-- 1 boincer umatlas     21248 Jan 15 07:44 stderr.txt
[2026-01-15 07:44:38] HITS file was successfully produced:
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas 148497622 Jan 15 07:43 shared/HITS.pool.root.1
[2026-01-15 07:44:38]  *** Contents of shared directory: ***
[2026-01-15 07:44:38] total 723492
[2026-01-15 07:44:38] -rw-r--r-- 2 boincer umatlas 590474318 Jan 15 06:00 ATLAS.root_0
[2026-01-15 07:44:38] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 06:00 start_atlas.sh
[2026-01-15 07:44:38] -rw-r--r-- 2 boincer umatlas    592410 Jan 15 06:00 input.tar.gz
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas 148497622 Jan 15 07:43 HITS.pool.root.1
[2026-01-15 07:44:38] -rw------- 1 boincer umatlas   1259520 Jan 15 07:44 result.tar.gz
07:44:40 (46640): run_atlas exited; CPU time 46587.858151
07:44:40 (46640): called boinc_finish(0)

</stderr_txt>
]]>

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