Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:41 (817482): wrapper (7.7.26015): starting
21:38:41 (817482): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 21:38:41] Arguments: --nthreads 3
[2026-01-15 21:38:41] Threads: 3
[2026-01-15 21:38:41] Checking for CVMFS
[2026-01-15 21:38:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 21:38:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 21:38:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 21:38:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 21:38:42] 2.13.3.0 719790 316 63148 155172 3 56 15168403 15728641 0 130560 0 308391 99.991 16485 21 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-15 21:38:42] CVMFS is ok
[2026-01-15 21:38:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 21:38:42] Checking for apptainer binary...
[2026-01-15 21:38:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 21:38:42] Running /usr/bin/apptainer --version
[2026-01-15 21:38:42] apptainer version 1.4.5-2.el9
[2026-01-15 21:38:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 21:38:42] testio003
[2026-01-15 21:38:42] apptainer works
[2026-01-15 21:38:42] Set ATHENA_PROC_NUMBER=3
[2026-01-15 21:38:42] Set ATHENA_CORE_NUMBER=3
[2026-01-15 21:38:42] Starting ATLAS job with PandaID=6970418329
[2026-01-15 21:38:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 22:59:07]  *** The last 200 lines of the pilot log: ***
[2026-01-15 22:59:07] 2026-01-15 13:58:17,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:18,008 | INFO     | time since job start (4766s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:20,013 | INFO     | time since job start (4768s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:20,092 | INFO     | monitor loop #369: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:20,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:22,018 | INFO     | time since job start (4770s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:22,594 | INFO     | monitor loop #370: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:22,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:24,023 | INFO     | time since job start (4772s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:25,096 | INFO     | monitor loop #371: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:25,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:26,029 | INFO     | time since job start (4774s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:27,599 | INFO     | monitor loop #372: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:27,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:28,034 | INFO     | time since job start (4776s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:30,039 | INFO     | time since job start (4778s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:30,102 | INFO     | monitor loop #373: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:30,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:32,044 | INFO     | time since job start (4780s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:32,604 | INFO     | monitor loop #374: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:32,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:33,090 | INFO     | PID=821155 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 22:59:07] 2026-01-15 13:58:34,090 | INFO     | time since job start (4782s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:35,105 | INFO     | monitor loop #375: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:35,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:36,094 | INFO     | time since job start (4784s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:37,608 | INFO     | monitor loop #376: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:37,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:38,099 | INFO     | time since job start (4786s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:40,104 | INFO     | time since job start (4788s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:40,110 | INFO     | monitor loop #377: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:40,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:42,109 | INFO     | time since job start (4790s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:42,612 | INFO     | monitor loop #378: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:42,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:44,111 | INFO     | time since job start (4792s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:45,115 | INFO     | monitor loop #379: job 0:6970418329 is in state 'finished'
[2026-01-15 22:59:07] 2026-01-15 13:58:45,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:59:07] 2026-01-15 13:58:46,115 | INFO     | time since job start (4794s) is within the limit (349056.0s)
[2026-01-15 22:59:07] 2026-01-15 13:58:46,323 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 22:59:07] 2026-01-15 13:58:46,323 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3600.00375
[2026-01-15 22:59:07] 2026-01-15 13:58:46,324 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6970418329/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 22:59:07] 2026-01-15 13:58:46,324 | INFO     | extracted standard info from prmon json
[2026-01-15 22:59:07] 2026-01-15 13:58:46,324 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 22:59:07] 2026-01-15 13:58:46,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 22:59:07] 2026-01-15 13:58:46,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 22:59:07] 2026-01-15 13:58:46,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 22:59:07] 2026-01-15 13:58:46,325 | INFO     | fitting pss+swap vs Time
[2026-01-15 22:59:07] 2026-01-15 13:58:46,325 | INFO     | sum of square deviations: 106336877.5
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | sum of deviations: -7120275874.0
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | mean x: 1768483164.5
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | mean y: 2432368.6285714284
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | intersect: 118419375820.48538
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | chi2: 0.1358481675549449
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | current memory leak: -66.96 B/s (using 70 data points, chi2=0.14)
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | could have reported an average CPU frequency of 3627 MHz (6 samples)
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | ..............................
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | . Timing measurements:
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | . get job = 0 s
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | . initial setup = 6 s
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | . payload setup = 4 s
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | . stage-in = 0 s
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | . payload execution = 4694 s
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | . stage-out = 0 s
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | . log creation = 0 s
[2026-01-15 22:59:07] 2026-01-15 13:58:46,326 | INFO     | ..............................
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | 
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | job summary report
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | --------------------------------------------------
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | PanDA job id: 6970418329
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | task id: 48215263
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | errors: (none)
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | pilot state: finished 
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | transexitcode: 0
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | exeerrorcode: 0
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | exeerrordiag: 
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | exitcode: 0
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | exitmsg: OK
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | cpuconsumptiontime: 12963 s
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | nevents: 400
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | neventsw: 0
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | pid: 827702
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | pgrp: 827702
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | corecount: 3
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | event service: False
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | sizes: {0: 2283952, 4: 2284214, 11: 2284242, 4703: 2310465, 4704: 2319519, 4780: 2319657}
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | --------------------------------------------------
[2026-01-15 22:59:07] 2026-01-15 13:58:46,363 | INFO     | 
[2026-01-15 22:59:07] 2026-01-15 13:58:46,364 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-15 22:59:07] 2026-01-15 13:58:46,374 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,375 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 22:59:07] 2026-01-15 13:58:46,376 | INFO     | job 6970418329 has completed (purged errors)
[2026-01-15 22:59:07] 2026-01-15 13:58:46,376 | INFO     | overall cleanup function is called
[2026-01-15 22:59:07] 2026-01-15 13:58:47,382 | INFO     | --- collectZombieJob: --- 10, [827702]
[2026-01-15 22:59:07] 2026-01-15 13:58:47,382 | INFO     | zombie collector waiting for pid 827702
[2026-01-15 22:59:07] 2026-01-15 13:58:47,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 22:59:07] 2026-01-15 13:58:47,382 | INFO     | collected zombie processes
[2026-01-15 22:59:07] 2026-01-15 13:58:47,382 | INFO     | will attempt to kill all subprocesses of pid=827702
[2026-01-15 22:59:07] 2026-01-15 13:58:47,414 | INFO     | process IDs to be killed: [827702] (in reverse order)
[2026-01-15 22:59:07] 2026-01-15 13:58:47,433 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 22:59:07] 2026-01-15 13:58:47,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 22:59:07] 2026-01-15 13:58:47,434 | INFO     | did not find any defunct processes belonging to 827702
[2026-01-15 22:59:07] 2026-01-15 13:58:47,435 | INFO     | did not find any defunct processes belonging to 827702
[2026-01-15 22:59:07] 2026-01-15 13:58:47,435 | INFO     | ready for new job
[2026-01-15 22:59:07] 2026-01-15 13:58:47,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 22:59:07] 2026-01-15 13:58:47,436 | INFO     | ***************************************
[2026-01-15 22:59:07] 2026-01-15 13:58:47,436 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 22:59:07] 2026-01-15 13:58:47,436 | INFO     | ***************************************
[2026-01-15 22:59:07] 2026-01-15 13:58:47,436 | INFO     | 
[2026-01-15 22:59:07] 2026-01-15 13:58:47,437 | INFO     | architecture information:
[2026-01-15 22:59:07] 2026-01-15 13:58:47,437 | INFO     | executing command: cat /etc/os-release
[2026-01-15 22:59:07] 2026-01-15 13:58:47,444 | INFO     | cat /etc/os-release:
[2026-01-15 22:59:07] NAME="CentOS Linux"
[2026-01-15 22:59:07] VERSION="7 (Core)"
[2026-01-15 22:59:07] ID="centos"
[2026-01-15 22:59:07] ID_LIKE="rhel fedora"
[2026-01-15 22:59:07] VERSION_ID="7"
[2026-01-15 22:59:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 22:59:07] ANSI_COLOR="0;31"
[2026-01-15 22:59:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 22:59:07] HOME_URL="https://www.centos.org/"
[2026-01-15 22:59:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 22:59:07] 
[2026-01-15 22:59:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 22:59:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 22:59:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 22:59:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 22:59:07] 
[2026-01-15 22:59:07] 2026-01-15 13:58:47,445 | INFO     | ***************************************
[2026-01-15 22:59:07] 2026-01-15 13:58:47,948 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-15 22:59:07] 2026-01-15 13:58:47,955 | INFO     | sufficient remaining disk space (47884271616 B)
[2026-01-15 22:59:07] 2026-01-15 13:58:47,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 22:59:07] 2026-01-15 13:58:47,955 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 22:59:07] 2026-01-15 13:58:47,955 | INFO     | update_server=False
[2026-01-15 22:59:07] 2026-01-15 13:58:47,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 22:59:07] 2026-01-15 13:58:47,955 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-15 22:59:07] 2026-01-15 13:58:47,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:59:07] 2026-01-15 13:58:47,956 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 22:59:07] 2026-01-15 13:58:47,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 22:59:07] 2026-01-15 13:58:47,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 22:59:07] 2026-01-15 13:58:48,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:59:07] 2026-01-15 13:58:48,623 | INFO     | aborting loop
[2026-01-15 22:59:07] 2026-01-15 13:58:48,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 22:59:07] 2026-01-15 13:58:48,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 22:59:07] 2026-01-15 13:58:48,835 | INFO     | all data control threads have been joined
[2026-01-15 22:59:07] 2026-01-15 13:58:48,961 | INFO     | [job] retrieve thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:48,961 | INFO     | [job] queue monitor thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:49,131 | INFO     | [payload] validate_post thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:49,227 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:49,273 | INFO     | all payload control threads have been joined
[2026-01-15 22:59:07] 2026-01-15 13:58:49,304 | INFO     | [data] copytool_in thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:49,373 | INFO     | all job control threads have been joined
[2026-01-15 22:59:07] 2026-01-15 13:58:49,628 | INFO     | [job] job monitor thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:49,797 | INFO     | [job] validate thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:49,797 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:49,797 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:49,840 | INFO     | [data] control thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:50,087 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:50,131 | INFO     | [payload] failed_post thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:50,278 | INFO     | [payload] control thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:50,378 | INFO     | [job] control thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:50,686 | INFO     | [data] copytool_out thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:58:52,693 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 22:59:07] 2026-01-15 13:59:00,299 | INFO     | [monitor] cgroup control has ended
[2026-01-15 22:59:07] 2026-01-15 13:59:01,980 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205637404480)>', '<ExcThread(monitor, started 140205281490688)>']
[2026-01-15 22:59:07] 2026-01-15 13:59:02,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 22:59:07] 2026-01-15 13:59:02,025 | INFO     | [monitor] control thread has ended
[2026-01-15 22:59:07] 2026-01-15 13:59:07,006 | INFO     | all workflow threads have been joined
[2026-01-15 22:59:07] 2026-01-15 13:59:07,006 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 22:59:07] 2026-01-15 13:59:07,006 | INFO     | traces error code: 0
[2026-01-15 22:59:07] 2026-01-15 13:59:07,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 22:59:07] 2026-01-15 13:59:07,065 [wrapper] ==== pilot stdout END ====
[2026-01-15 22:59:07] 2026-01-15 13:59:07,067 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 22:59:07] 2026-01-15 13:59:07,068 [wrapper] pilotpid: 821155
[2026-01-15 22:59:07] 2026-01-15 13:59:07,070 [wrapper] Pilot exit status: 0
[2026-01-15 22:59:07] 2026-01-15 13:59:07,075 [wrapper] pandaids: 6970418329
[2026-01-15 22:59:07] 2026-01-15 13:59:07,087 [wrapper] cleanup supervisor_pilot  839294 821156
[2026-01-15 22:59:07] 2026-01-15 13:59:07,088 [wrapper] Test setup, not cleaning
[2026-01-15 22:59:07] 2026-01-15 13:59:07,090 [wrapper] apfmon messages muted
[2026-01-15 22:59:07] 2026-01-15 13:59:07,092 [wrapper] ==== wrapper stdout END ====
[2026-01-15 22:59:07] 2026-01-15 13:59:07,093 [wrapper] ==== wrapper stderr END ====
[2026-01-15 22:59:07]  *** Error codes and diagnostics ***
[2026-01-15 22:59:07]     "exeErrorCode": 0,
[2026-01-15 22:59:07]     "exeErrorDiag": "",
[2026-01-15 22:59:07]     "pilotErrorCode": 0,
[2026-01-15 22:59:07]     "pilotErrorDiag": "",
[2026-01-15 22:59:07]  *** Listing of results directory ***
[2026-01-15 22:59:07] total 742964
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc    579449 Jan 15 15:52 pilot3.tar.gz
[2026-01-15 22:59:07] -rwx------. 1 boinc boinc     36322 Jan 15 15:56 runpilot2-wrapper.sh
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc      5112 Jan 15 16:00 queuedata.json
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc       100 Jan 15 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 22:59:07] -rwxr-xr-x. 1 boinc boinc      7986 Jan 15 21:38 run_atlas
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc       105 Jan 15 21:38 job.xml
[2026-01-15 22:59:07] -rw-r--r--. 2 boinc boinc     15847 Jan 15 21:38 start_atlas.sh
[2026-01-15 22:59:07] drwxrwx--x. 2 boinc boinc        68 Jan 15 21:38 shared
[2026-01-15 22:59:07] -rw-r--r--. 2 boinc boinc    592406 Jan 15 21:38 input.tar.gz
[2026-01-15 22:59:07] -rw-r--r--. 2 boinc boinc 596422496 Jan 15 21:38 EVNT.32794306._001889.pool.root.1
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc         0 Jan 15 21:38 boinc_lockfile
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc      2509 Jan 15 21:38 pandaJob.out
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc   1004221 Jan 15 21:38 agis_schedconf.cvmfs.json
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc   1516246 Jan 15 21:38 agis_ddmendpoints.agis.ALL.json
[2026-01-15 22:59:07] drwx------. 5 boinc boinc      4096 Jan 15 21:38 pilot3
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc      9413 Jan 15 22:07 init_data.xml
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc 158589232 Jan 15 22:57 HITS.48215263._048650.pool.root.1
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc      1015 Jan 15 22:57 memory_monitor_summary.json
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc    237321 Jan 15 22:57 log.48215263._048650.job.log.tgz.1
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc       530 Jan 15 22:57 boinc_task_state.xml
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc        95 Jan 15 22:58 pilot_heartbeat.json
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc      8192 Jan 15 22:58 boinc_mmap_file
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc        27 Jan 15 22:58 wrapper_checkpoint.txt
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc      7764 Jan 15 22:58 heartbeat.json
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc      4552 Jan 15 22:59 pilotlog.txt
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc    693794 Jan 15 22:59 log.48215263._048650.job.log.1
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc       357 Jan 15 22:59 output.list
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc       620 Jan 15 22:59 runtime_log
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc    952320 Jan 15 22:59 result.tar.gz
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc      8775 Jan 15 22:59 runtime_log.err
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc       643 Jan 15 22:59 4KpNDmMSW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLbuKDmiSt3Xo.diag
[2026-01-15 22:59:07] -rw-r--r--. 1 boinc boinc     21980 Jan 15 22:59 stderr.txt
[2026-01-15 22:59:07] HITS file was successfully produced:
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc 158589232 Jan 15 22:57 shared/HITS.pool.root.1
[2026-01-15 22:59:07]  *** Contents of shared directory: ***
[2026-01-15 22:59:07] total 738848
[2026-01-15 22:59:07] -rw-r--r--. 2 boinc boinc     15847 Jan 15 21:38 start_atlas.sh
[2026-01-15 22:59:07] -rw-r--r--. 2 boinc boinc    592406 Jan 15 21:38 input.tar.gz
[2026-01-15 22:59:07] -rw-r--r--. 2 boinc boinc 596422496 Jan 15 21:38 ATLAS.root_0
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc 158589232 Jan 15 22:57 HITS.pool.root.1
[2026-01-15 22:59:07] -rw-------. 1 boinc boinc    952320 Jan 15 22:59 result.tar.gz
22:59:08 (817482): run_atlas exited; CPU time 12968.800745
22:59:08 (817482): called boinc_finish(0)

</stderr_txt>
]]>

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