Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:59:11 (841830): wrapper (7.7.26015): starting
22:59:11 (841830): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 22:59:11] Arguments: --nthreads 3
[2026-01-15 22:59:11] Threads: 3
[2026-01-15 22:59:11] Checking for CVMFS
[2026-01-15 22:59:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 22:59:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 22:59:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 22:59:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 22:59:12] 2.13.3.0 719790 397 64496 155174 2 57 15175967 15728641 0 130560 0 385541 99.992 19238 20 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-15 22:59:12] CVMFS is ok
[2026-01-15 22:59:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 22:59:12] Checking for apptainer binary...
[2026-01-15 22:59:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 22:59:12] Running /usr/bin/apptainer --version
[2026-01-15 22:59:12] apptainer version 1.4.5-2.el9
[2026-01-15 22:59:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 22:59:12] testio003
[2026-01-15 22:59:12] apptainer works
[2026-01-15 22:59:12] Set ATHENA_PROC_NUMBER=3
[2026-01-15 22:59:12] Set ATHENA_CORE_NUMBER=3
[2026-01-15 22:59:12] Starting ATLAS job with PandaID=6970285741
[2026-01-15 22:59:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 00:18:44]  *** The last 200 lines of the pilot log: ***
[2026-01-16 00:18:44] 2026-01-15 15:17:44,857 | INFO     | 4708s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-16 00:18:44] 2026-01-15 15:17:44,894 | INFO     | monitor loop #367: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:17:44,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:17:46,862 | INFO     | time since job start (4705s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:17:47,397 | INFO     | monitor loop #368: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:17:47,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:17:48,867 | INFO     | time since job start (4707s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:17:49,899 | INFO     | monitor loop #369: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:17:49,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:17:49,912 | INFO     | PID=845503 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-16 00:18:44] 2026-01-15 15:17:50,912 | INFO     | time since job start (4709s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:17:52,401 | INFO     | monitor loop #370: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:17:52,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:17:52,917 | INFO     | time since job start (4711s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:17:54,903 | INFO     | monitor loop #371: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:17:54,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:17:54,918 | INFO     | time since job start (4713s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:17:56,923 | INFO     | time since job start (4715s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:17:57,406 | INFO     | monitor loop #372: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:17:57,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:17:58,928 | INFO     | time since job start (4717s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:17:59,908 | INFO     | monitor loop #373: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:17:59,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:18:00,933 | INFO     | time since job start (4719s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:18:02,411 | INFO     | monitor loop #374: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:18:02,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:18:02,938 | INFO     | time since job start (4721s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:18:04,914 | INFO     | monitor loop #375: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:18:04,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:18:04,943 | INFO     | time since job start (4723s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:18:06,948 | INFO     | time since job start (4725s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:18:07,416 | INFO     | monitor loop #376: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:18:07,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:18:08,953 | INFO     | time since job start (4727s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:18:09,918 | INFO     | monitor loop #377: job 0:6970285741 is in state 'finished'
[2026-01-16 00:18:44] 2026-01-15 15:18:09,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:18:44] 2026-01-15 15:18:10,958 | INFO     | time since job start (4729s) is within the limit (349056.0s)
[2026-01-16 00:18:44] 2026-01-15 15:18:12,004 | INFO     | PID=845503 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-16 00:18:44] 2026-01-15 15:18:12,362 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 00:18:44] 2026-01-15 15:18:12,362 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3670.3625
[2026-01-16 00:18:44] 2026-01-15 15:18:12,363 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6970285741/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 00:18:44] 2026-01-15 15:18:12,363 | INFO     | extracted standard info from prmon json
[2026-01-16 00:18:44] 2026-01-15 15:18:12,364 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 00:18:44] 2026-01-15 15:18:12,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 00:18:44] 2026-01-15 15:18:12,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 00:18:44] 2026-01-15 15:18:12,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | fitting pss+swap vs Time
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | sum of square deviations: 101843770.0
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | sum of deviations: -6233933430.000001
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | mean x: 1768487964.0
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | mean y: 2431690.5507246377
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | intersect: 108252904344.22643
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | chi2: 0.13128950648132076
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | current memory leak: -61.21 B/s (using 69 data points, chi2=0.13)
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | could have reported an average CPU frequency of 3627 MHz (6 samples)
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | ..............................
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | . Timing measurements:
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | . get job = 0 s
[2026-01-16 00:18:44] 2026-01-15 15:18:12,365 | INFO     | . initial setup = 5 s
[2026-01-16 00:18:44] 2026-01-15 15:18:12,366 | INFO     | . payload setup = 4 s
[2026-01-16 00:18:44] 2026-01-15 15:18:12,366 | INFO     | . stage-in = 0 s
[2026-01-16 00:18:44] 2026-01-15 15:18:12,366 | INFO     | . payload execution = 4629 s
[2026-01-16 00:18:44] 2026-01-15 15:18:12,366 | INFO     | . stage-out = 0 s
[2026-01-16 00:18:44] 2026-01-15 15:18:12,366 | INFO     | . log creation = 0 s
[2026-01-16 00:18:44] 2026-01-15 15:18:12,366 | INFO     | ..............................
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | 
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | job summary report
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | --------------------------------------------------
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | PanDA job id: 6970285741
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | task id: 48215263
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | errors: (none)
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | pilot state: finished 
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | transexitcode: 0
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | exeerrorcode: 0
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | exeerrordiag: 
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | exitcode: 0
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | exitmsg: OK
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | cpuconsumptiontime: 12791 s
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | nevents: 400
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | neventsw: 0
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | pid: 852035
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | pgrp: 852035
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | corecount: 3
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | event service: False
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | sizes: {0: 2283893, 4: 2284155, 11: 2284183, 4637: 2310403, 4638: 2319456, 4716: 2319594}
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | --------------------------------------------------
[2026-01-16 00:18:44] 2026-01-15 15:18:12,402 | INFO     | 
[2026-01-16 00:18:44] 2026-01-15 15:18:12,403 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-16 00:18:44] 2026-01-15 15:18:12,413 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 00:18:44] 2026-01-15 15:18:12,414 | INFO     | job 6970285741 has completed (purged errors)
[2026-01-16 00:18:44] 2026-01-15 15:18:12,415 | INFO     | overall cleanup function is called
[2026-01-16 00:18:44] 2026-01-15 15:18:13,421 | INFO     | --- collectZombieJob: --- 10, [852035]
[2026-01-16 00:18:44] 2026-01-15 15:18:13,421 | INFO     | zombie collector waiting for pid 852035
[2026-01-16 00:18:44] 2026-01-15 15:18:13,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 00:18:44] 2026-01-15 15:18:13,421 | INFO     | collected zombie processes
[2026-01-16 00:18:44] 2026-01-15 15:18:13,421 | INFO     | will attempt to kill all subprocesses of pid=852035
[2026-01-16 00:18:44] 2026-01-15 15:18:13,452 | INFO     | process IDs to be killed: [852035] (in reverse order)
[2026-01-16 00:18:44] 2026-01-15 15:18:13,473 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 00:18:44] 2026-01-15 15:18:13,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 00:18:44] 2026-01-15 15:18:13,474 | INFO     | did not find any defunct processes belonging to 852035
[2026-01-16 00:18:44] 2026-01-15 15:18:13,475 | INFO     | did not find any defunct processes belonging to 852035
[2026-01-16 00:18:44] 2026-01-15 15:18:13,475 | INFO     | ready for new job
[2026-01-16 00:18:44] 2026-01-15 15:18:13,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 00:18:44] 2026-01-15 15:18:13,476 | INFO     | ***************************************
[2026-01-16 00:18:44] 2026-01-15 15:18:13,476 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 00:18:44] 2026-01-15 15:18:13,476 | INFO     | ***************************************
[2026-01-16 00:18:44] 2026-01-15 15:18:13,476 | INFO     | 
[2026-01-16 00:18:44] 2026-01-15 15:18:13,476 | INFO     | architecture information:
[2026-01-16 00:18:44] 2026-01-15 15:18:13,477 | INFO     | executing command: cat /etc/os-release
[2026-01-16 00:18:44] 2026-01-15 15:18:13,484 | INFO     | cat /etc/os-release:
[2026-01-16 00:18:44] NAME="CentOS Linux"
[2026-01-16 00:18:44] VERSION="7 (Core)"
[2026-01-16 00:18:44] ID="centos"
[2026-01-16 00:18:44] ID_LIKE="rhel fedora"
[2026-01-16 00:18:44] VERSION_ID="7"
[2026-01-16 00:18:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 00:18:44] ANSI_COLOR="0;31"
[2026-01-16 00:18:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 00:18:44] HOME_URL="https://www.centos.org/"
[2026-01-16 00:18:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 00:18:44] 
[2026-01-16 00:18:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 00:18:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 00:18:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 00:18:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 00:18:44] 
[2026-01-16 00:18:44] 2026-01-15 15:18:13,484 | INFO     | ***************************************
[2026-01-16 00:18:44] 2026-01-15 15:18:13,987 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-16 00:18:44] 2026-01-15 15:18:13,996 | INFO     | sufficient remaining disk space (48467279872 B)
[2026-01-16 00:18:44] 2026-01-15 15:18:13,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 00:18:44] 2026-01-15 15:18:13,996 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 00:18:44] 2026-01-15 15:18:13,996 | INFO     | update_server=False
[2026-01-16 00:18:44] 2026-01-15 15:18:13,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 00:18:44] 2026-01-15 15:18:13,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 00:18:44] 2026-01-15 15:18:13,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 00:18:44] 2026-01-15 15:18:13,996 | INFO     | aborting loop
[2026-01-16 00:18:44] 2026-01-15 15:18:14,406 | INFO     | all job control threads have been joined
[2026-01-16 00:18:44] 2026-01-15 15:18:14,508 | INFO     | all data control threads have been joined
[2026-01-16 00:18:44] 2026-01-15 15:18:15,001 | INFO     | [job] retrieve thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:15,002 | INFO     | [job] queue monitor thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:15,002 | INFO     | [job] job monitor thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:15,339 | INFO     | all payload control threads have been joined
[2026-01-16 00:18:44] 2026-01-15 15:18:15,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 00:18:44] 2026-01-15 15:18:15,411 | INFO     | [job] control thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:15,488 | INFO     | [payload] validate_post thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:15,513 | INFO     | [data] control thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:15,617 | INFO     | [data] copytool_in thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:16,059 | INFO     | [job] validate thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:16,063 | INFO     | [payload] failed_post thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:16,242 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:16,245 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:16,344 | INFO     | [payload] control thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:16,435 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:17,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 00:18:44] 2026-01-15 15:18:17,357 | INFO     | [data] copytool_out thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:21,360 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:24,510 | INFO     | job.realtimelogging is not enabled
[2026-01-16 00:18:44] 2026-01-15 15:18:25,515 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 00:18:44] 2026-01-15 15:18:29,110 | INFO     | [monitor] cgroup control has ended
[2026-01-16 00:18:44] 2026-01-15 15:18:29,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285218731840)>', '<ExcThread(monitor, started 140284771956480)>']
[2026-01-16 00:18:44] 2026-01-15 15:18:34,987 | INFO     | all workflow threads have been joined
[2026-01-16 00:18:44] 2026-01-15 15:18:34,987 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 00:18:44] 2026-01-15 15:18:34,987 | INFO     | traces error code: 0
[2026-01-16 00:18:44] 2026-01-15 15:18:34,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 00:18:44] 2026-01-15 15:18:44,093 | INFO     | PID=845503 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-16 00:18:44] 2026-01-15 15:18:44,094 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 00:18:44] 2026-01-15 15:18:44,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 00:18:44] 2026-01-15 15:18:44,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 00:18:44] 2026-01-15 15:18:44,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 00:18:44] 2026-01-15 15:18:44,094 | INFO     | [monitor] control thread has ended
[2026-01-16 00:18:44] 2026-01-15 15:18:44,153 [wrapper] ==== pilot stdout END ====
[2026-01-16 00:18:44] 2026-01-15 15:18:44,155 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 00:18:44] 2026-01-15 15:18:44,157 [wrapper] pilotpid: 845503
[2026-01-16 00:18:44] 2026-01-15 15:18:44,159 [wrapper] Pilot exit status: 0
[2026-01-16 00:18:44] 2026-01-15 15:18:44,164 [wrapper] pandaids: 6970285741
[2026-01-16 00:18:44] 2026-01-15 15:18:44,176 [wrapper] cleanup supervisor_pilot  863668 845504
[2026-01-16 00:18:44] 2026-01-15 15:18:44,178 [wrapper] Test setup, not cleaning
[2026-01-16 00:18:44] 2026-01-15 15:18:44,180 [wrapper] apfmon messages muted
[2026-01-16 00:18:44] 2026-01-15 15:18:44,181 [wrapper] ==== wrapper stdout END ====
[2026-01-16 00:18:44] 2026-01-15 15:18:44,183 [wrapper] ==== wrapper stderr END ====
[2026-01-16 00:18:44]  *** Error codes and diagnostics ***
[2026-01-16 00:18:44]     "exeErrorCode": 0,
[2026-01-16 00:18:44]     "exeErrorDiag": "",
[2026-01-16 00:18:44]     "pilotErrorCode": 0,
[2026-01-16 00:18:44]     "pilotErrorDiag": "",
[2026-01-16 00:18:44]  *** Listing of results directory ***
[2026-01-16 00:18:44] total 737136
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc    579449 Jan 15 12:00 pilot3.tar.gz
[2026-01-16 00:18:44] -rwx------. 1 boinc boinc     36322 Jan 15 12:02 runpilot2-wrapper.sh
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc      5112 Jan 15 12:05 queuedata.json
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc       100 Jan 15 22:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 00:18:44] -rwxr-xr-x. 1 boinc boinc      7986 Jan 15 22:59 run_atlas
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc       105 Jan 15 22:59 job.xml
[2026-01-16 00:18:44] -rw-r--r--. 2 boinc boinc 594460381 Jan 15 22:59 EVNT.32794306._000945.pool.root.1
[2026-01-16 00:18:44] -rw-r--r--. 2 boinc boinc     15847 Jan 15 22:59 start_atlas.sh
[2026-01-16 00:18:44] drwxrwx--x. 2 boinc boinc        68 Jan 15 22:59 shared
[2026-01-16 00:18:44] -rw-r--r--. 2 boinc boinc    592408 Jan 15 22:59 input.tar.gz
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc      9407 Jan 15 22:59 init_data.xml
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc         0 Jan 15 22:59 boinc_lockfile
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc      2504 Jan 15 22:59 pandaJob.out
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc   1004248 Jan 15 22:59 agis_schedconf.cvmfs.json
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc   1516246 Jan 15 22:59 agis_ddmendpoints.agis.ALL.json
[2026-01-16 00:18:44] drwx------. 5 boinc boinc      4096 Jan 15 22:59 pilot3
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc 154612054 Jan 16 00:16 HITS.48215263._043666.pool.root.1
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc      1013 Jan 16 00:16 memory_monitor_summary.json
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc    230421 Jan 16 00:16 log.48215263._043666.job.log.tgz.1
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc       530 Jan 16 00:16 boinc_task_state.xml
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc      7755 Jan 16 00:18 heartbeat.json
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc        27 Jan 16 00:18 wrapper_checkpoint.txt
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc      8192 Jan 16 00:18 boinc_mmap_file
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc        95 Jan 16 00:18 pilot_heartbeat.json
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc       746 Jan 16 00:18 pilotlog.txt
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc    687204 Jan 16 00:18 log.48215263._043666.job.log.1
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc       357 Jan 16 00:18 output.list
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc       620 Jan 16 00:18 runtime_log
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc    942080 Jan 16 00:18 result.tar.gz
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc       643 Jan 16 00:18 YLUNDmBoS08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWntKDmk4Jnrm.diag
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc      8775 Jan 16 00:18 runtime_log.err
[2026-01-16 00:18:44] -rw-r--r--. 1 boinc boinc     22138 Jan 16 00:18 stderr.txt
[2026-01-16 00:18:44] HITS file was successfully produced:
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc 154612054 Jan 16 00:16 shared/HITS.pool.root.1
[2026-01-16 00:18:44]  *** Contents of shared directory: ***
[2026-01-16 00:18:44] total 733036
[2026-01-16 00:18:44] -rw-r--r--. 2 boinc boinc 594460381 Jan 15 22:59 ATLAS.root_0
[2026-01-16 00:18:44] -rw-r--r--. 2 boinc boinc     15847 Jan 15 22:59 start_atlas.sh
[2026-01-16 00:18:44] -rw-r--r--. 2 boinc boinc    592408 Jan 15 22:59 input.tar.gz
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc 154612054 Jan 16 00:16 HITS.pool.root.1
[2026-01-16 00:18:44] -rw-------. 1 boinc boinc    942080 Jan 16 00:18 result.tar.gz
00:18:45 (841830): run_atlas exited; CPU time 12797.933640
00:18:45 (841830): called boinc_finish(0)

</stderr_txt>
]]>

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