Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:35:59 (2111579): wrapper (7.7.26015): starting
17:35:59 (2111579): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 17:36:00] Arguments: --nthreads 12
[2026-01-16 17:36:00] Threads: 12
[2026-01-16 17:36:00] Checking for CVMFS
[2026-01-16 17:36:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 17:36:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 17:36:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 17:36:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 17:36:01] 2.13.3.0 40677 10784 62256 155215 1 240 4070541 4096000 19006 130560 0 89763142 99.983 1164501 228 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 17:36:01] CVMFS is ok
[2026-01-16 17:36:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 17:36:01] Checking for apptainer binary...
[2026-01-16 17:36:01] apptainer is not installed, using version from CVMFS
[2026-01-16 17:36:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 17:36:03] epyc7v12
[2026-01-16 17:36:03] apptainer works
[2026-01-16 17:36:03] Set ATHENA_PROC_NUMBER=12
[2026-01-16 17:36:03] Set ATHENA_CORE_NUMBER=12
[2026-01-16 17:36:03] Starting ATLAS job with PandaID=6970396001
[2026-01-16 17:36:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31426/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 19:12:04]  *** The last 200 lines of the pilot log: ***
[2026-01-16 19:12:04] 2026-01-16 19:11:10,737 | INFO     | monitor loop #373: job 0:6970396001 is in state 'finished'
[2026-01-16 19:12:04] 2026-01-16 19:11:10,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 19:12:04] 2026-01-16 19:11:11,594 | INFO     | time since job start (5677s) is within the limit (349056.0s)
[2026-01-16 19:12:04] 2026-01-16 19:11:12,522 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 19:12:04] 2026-01-16 19:11:13,240 | INFO     | monitor loop #374: job 0:6970396001 is in state 'finished'
[2026-01-16 19:12:04] 2026-01-16 19:11:13,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 19:12:04] 2026-01-16 19:11:14,087 | INFO     | PID=2115785 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 19:12:04] 2026-01-16 19:11:14,088 | INFO     | .. there are 22 such processes running
[2026-01-16 19:12:04] 2026-01-16 19:11:15,093 | INFO     | time since job start (5681s) is within the limit (349056.0s)
[2026-01-16 19:12:04] 2026-01-16 19:11:15,093 | INFO     | 5683s have passed since pilot start - server update state is 'RUNNING'
[2026-01-16 19:12:04] 2026-01-16 19:11:15,415 | INFO     | job 6970396001 has state=finished
[2026-01-16 19:12:04] 2026-01-16 19:11:15,415 | INFO     | preparing for final server update for job 6970396001 in state='finished'
[2026-01-16 19:12:04] 2026-01-16 19:11:15,416 | INFO     | this job has now completed (state=finished)
[2026-01-16 19:12:04] 2026-01-16 19:11:15,416 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 19:12:04] 2026-01-16 19:11:15,416 | INFO     | log transfer has been attempted: DONE
[2026-01-16 19:12:04] 2026-01-16 19:11:15,416 | INFO     | job 6970396001 has finished - writing final server update
[2026-01-16 19:12:04] 2026-01-16 19:11:15,417 | INFO     | total number of processed events: 400 (read)
[2026-01-16 19:12:04] 2026-01-16 19:11:15,418 | INFO     | executing command: lscpu
[2026-01-16 19:12:04] 2026-01-16 19:11:15,640 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 19:12:04] 2026-01-16 19:11:15,743 | INFO     | monitor loop #375: job 0:6970396001 is in state 'finished'
[2026-01-16 19:12:04] 2026-01-16 19:11:15,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 19:12:04] 2026-01-16 19:11:17,102 | INFO     | time since job start (5683s) is within the limit (349056.0s)
[2026-01-16 19:12:04] 2026-01-16 19:11:18,251 | INFO     | monitor loop #376: job 0:6970396001 is in state 'finished'
[2026-01-16 19:12:04] 2026-01-16 19:11:18,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 19:12:04] 2026-01-16 19:11:19,110 | INFO     | time since job start (5685s) is within the limit (349056.0s)
[2026-01-16 19:12:04] 2026-01-16 19:11:20,757 | INFO     | monitor loop #377: job 0:6970396001 is in state 'finished'
[2026-01-16 19:12:04] 2026-01-16 19:11:20,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 19:12:04] 2026-01-16 19:11:21,115 | INFO     | time since job start (5687s) is within the limit (349056.0s)
[2026-01-16 19:12:04] 2026-01-16 19:11:23,125 | INFO     | time since job start (5689s) is within the limit (349056.0s)
[2026-01-16 19:12:04] 2026-01-16 19:11:23,260 | INFO     | monitor loop #378: job 0:6970396001 is in state 'finished'
[2026-01-16 19:12:04] 2026-01-16 19:11:23,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 19:12:04] 2026-01-16 19:11:25,130 | INFO     | time since job start (5691s) is within the limit (349056.0s)
[2026-01-16 19:12:04] 2026-01-16 19:11:25,764 | INFO     | monitor loop #379: job 0:6970396001 is in state 'finished'
[2026-01-16 19:12:04] 2026-01-16 19:11:25,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 19:12:04] 2026-01-16 19:11:27,135 | INFO     | time since job start (5693s) is within the limit (349056.0s)
[2026-01-16 19:12:04] 2026-01-16 19:11:28,267 | INFO     | monitor loop #380: job 0:6970396001 is in state 'finished'
[2026-01-16 19:12:04] 2026-01-16 19:11:28,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 19:12:04] 2026-01-16 19:11:29,140 | INFO     | time since job start (5695s) is within the limit (349056.0s)
[2026-01-16 19:12:04] 2026-01-16 19:11:29,546 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 19:12:04] 2026-01-16 19:11:29,595 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2398.6158124999997
[2026-01-16 19:12:04] 2026-01-16 19:11:29,649 | INFO     | using path: /opt/boinc/instance_homes/boinc_31426/slots/0/PanDA_Pilot-6970396001/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 19:12:04] 2026-01-16 19:11:29,651 | INFO     | extracted standard info from prmon json
[2026-01-16 19:12:04] 2026-01-16 19:11:29,651 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 19:12:04] 2026-01-16 19:11:29,651 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 19:12:04] 2026-01-16 19:11:29,651 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 19:12:04] 2026-01-16 19:11:29,651 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 19:12:04] 2026-01-16 19:11:29,657 | INFO     | fitting pss+swap vs Time
[2026-01-16 19:12:04] 2026-01-16 19:11:29,657 | INFO     | sum of square deviations: 190394866.04705885
[2026-01-16 19:12:04] 2026-01-16 19:11:29,657 | INFO     | sum of deviations: 5294304552.77647
[2026-01-16 19:12:04] 2026-01-16 19:11:29,657 | INFO     | mean x: 1768587927.1058824
[2026-01-16 19:12:04] 2026-01-16 19:11:29,658 | INFO     | mean y: 2684359.2470588237
[2026-01-16 19:12:04] 2026-01-16 19:11:29,658 | INFO     | intersect: -49176389157.09378
[2026-01-16 19:12:04] 2026-01-16 19:11:29,662 | INFO     | chi2: 0.14239096517628577
[2026-01-16 19:12:04] 2026-01-16 19:11:29,662 | INFO     | current memory leak: 27.81 B/s (using 85 data points, chi2=0.14)
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | could have reported an average CPU frequency of 2401 MHz (7 samples)
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | ..............................
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | . Timing measurements:
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | . get job = 0 s
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | . initial setup = 3 s
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | . payload setup = 16 s
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | . stage-in = 0 s
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | . payload execution = 5615 s
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | . stage-out = 1 s
[2026-01-16 19:12:04] 2026-01-16 19:11:29,663 | INFO     | . log creation = 0 s
[2026-01-16 19:12:04] 2026-01-16 19:11:29,664 | INFO     | ..............................
[2026-01-16 19:12:04] 2026-01-16 19:11:29,827 | INFO     | 
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | job summary report
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | --------------------------------------------------
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | PanDA job id: 6970396001
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | task id: 48215263
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | errors: (none)
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | pilot state: finished 
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | transexitcode: 0
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | exeerrorcode: 0
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | exeerrordiag: 
[2026-01-16 19:12:04] 2026-01-16 19:11:29,828 | INFO     | exitcode: 0
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | exitmsg: OK
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | cpuconsumptiontime: 30386 s
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | nevents: 400
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | neventsw: 0
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | pid: 2124810
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | pgrp: 2124810
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | corecount: 12
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | event service: False
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | sizes: {0: 2283124, 1: 2283832, 2: 2284031, 13: 2284031, 15: 2284349, 23: 2284377, 5635: 2311205, 5636: 2311204, 5639: 2320304, 5642: 2320360, 5659: 2320554}
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | --------------------------------------------------
[2026-01-16 19:12:04] 2026-01-16 19:11:29,829 | INFO     | 
[2026-01-16 19:12:04] 2026-01-16 19:11:29,830 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31426/slots/0
[2026-01-16 19:12:04] 2026-01-16 19:11:29,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,901 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 19:12:04] 2026-01-16 19:11:29,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 19:12:04] 2026-01-16 19:11:29,908 | INFO     | job 6970396001 has completed (purged errors)
[2026-01-16 19:12:04] 2026-01-16 19:11:29,908 | INFO     | overall cleanup function is called
[2026-01-16 19:12:04] 2026-01-16 19:11:30,922 | INFO     | --- collectZombieJob: --- 10, [2124810]
[2026-01-16 19:12:04] 2026-01-16 19:11:30,922 | INFO     | zombie collector waiting for pid 2124810
[2026-01-16 19:12:04] 2026-01-16 19:11:30,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 19:12:04] 2026-01-16 19:11:30,922 | INFO     | collected zombie processes
[2026-01-16 19:12:04] 2026-01-16 19:11:30,923 | INFO     | will attempt to kill all subprocesses of pid=2124810
[2026-01-16 19:12:04] 2026-01-16 19:11:32,280 | INFO     | process IDs to be killed: [2124810] (in reverse order)
[2026-01-16 19:12:04] 2026-01-16 19:11:32,878 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 19:12:04] 2026-01-16 19:11:32,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 19:12:04] 2026-01-16 19:11:32,936 | INFO     | did not find any defunct processes belonging to 2124810
[2026-01-16 19:12:04] 2026-01-16 19:11:32,983 | INFO     | did not find any defunct processes belonging to 2124810
[2026-01-16 19:12:04] 2026-01-16 19:11:32,983 | INFO     | ready for new job
[2026-01-16 19:12:04] 2026-01-16 19:11:32,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 19:12:04] 2026-01-16 19:11:32,986 | INFO     | ***************************************
[2026-01-16 19:12:04] 2026-01-16 19:11:32,986 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 19:12:04] 2026-01-16 19:11:32,986 | INFO     | ***************************************
[2026-01-16 19:12:04] 2026-01-16 19:11:32,986 | INFO     | 
[2026-01-16 19:12:04] 2026-01-16 19:11:33,020 | INFO     | architecture information:
[2026-01-16 19:12:04] 2026-01-16 19:11:33,027 | INFO     | executing command: cat /etc/os-release
[2026-01-16 19:12:04] 2026-01-16 19:11:33,070 | INFO     | cat /etc/os-release:
[2026-01-16 19:12:04] NAME="CentOS Linux"
[2026-01-16 19:12:04] VERSION="7 (Core)"
[2026-01-16 19:12:04] ID="centos"
[2026-01-16 19:12:04] ID_LIKE="rhel fedora"
[2026-01-16 19:12:04] VERSION_ID="7"
[2026-01-16 19:12:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 19:12:04] ANSI_COLOR="0;31"
[2026-01-16 19:12:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 19:12:04] HOME_URL="https://www.centos.org/"
[2026-01-16 19:12:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 19:12:04] 
[2026-01-16 19:12:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 19:12:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 19:12:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 19:12:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 19:12:04] 
[2026-01-16 19:12:04] 2026-01-16 19:11:33,072 | INFO     | ***************************************
[2026-01-16 19:12:04] 2026-01-16 19:11:33,575 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31426/slots/0
[2026-01-16 19:12:04] 2026-01-16 19:11:33,626 | INFO     | sufficient remaining disk space (329037905920 B)
[2026-01-16 19:12:04] 2026-01-16 19:11:33,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 19:12:04] 2026-01-16 19:11:33,626 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 19:12:04] 2026-01-16 19:11:33,627 | INFO     | update_server=False
[2026-01-16 19:12:04] 2026-01-16 19:11:33,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 19:12:04] 2026-01-16 19:11:34,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 19:12:04] 2026-01-16 19:11:34,284 | INFO     | aborting loop
[2026-01-16 19:12:04] 2026-01-16 19:11:34,313 | INFO     | all data control threads have been joined
[2026-01-16 19:12:04] 2026-01-16 19:11:34,529 | INFO     | all job control threads have been joined
[2026-01-16 19:12:04] 2026-01-16 19:11:34,633 | INFO     | [job] retrieve thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:34,792 | INFO     | [job] validate thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:34,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 19:12:04] 2026-01-16 19:11:34,845 | INFO     | all payload control threads have been joined
[2026-01-16 19:12:04] 2026-01-16 19:11:35,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 19:12:04] 2026-01-16 19:11:35,064 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:35,292 | INFO     | [job] job monitor thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:35,318 | INFO     | [data] control thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:35,400 | INFO     | [payload] failed_post thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:35,445 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:35,534 | INFO     | [job] control thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:35,793 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:35,816 | INFO     | [data] copytool_in thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:35,849 | INFO     | [job] queue monitor thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:35,850 | INFO     | [payload] control thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:36,024 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:36,197 | INFO     | [payload] validate_post thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:36,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 19:12:04] 2026-01-16 19:11:37,067 | INFO     | [data] copytool_out thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:40,859 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 19:12:04] 2026-01-16 19:11:43,432 | INFO     | [monitor] cgroup control has ended
[2026-01-16 19:12:04] 2026-01-16 19:11:44,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126811823646528)>', '<ExcThread(monitor, started 126811409192704)>']
[2026-01-16 19:12:04] 2026-01-16 19:11:49,462 | INFO     | all workflow threads have been joined
[2026-01-16 19:12:04] 2026-01-16 19:11:49,462 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 19:12:04] 2026-01-16 19:11:49,463 | INFO     | traces error code: 0
[2026-01-16 19:12:04] 2026-01-16 19:11:49,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 19:12:04] 2026-01-16 19:12:03,414 | INFO     | PID=2115785 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 19:12:04] 2026-01-16 19:12:03,415 | INFO     | .. there are 22 such processes running
[2026-01-16 19:12:04] 2026-01-16 19:12:03,415 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 19:12:04] 2026-01-16 19:12:03,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 19:12:04] 2026-01-16 19:12:03,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 19:12:04] 2026-01-16 19:12:03,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 19:12:04] 2026-01-16 19:12:03,416 | INFO     | [monitor] control thread has ended
[2026-01-16 19:12:04] 2026-01-16 19:12:03,819 [wrapper] ==== pilot stdout END ====
[2026-01-16 19:12:04] 2026-01-16 19:12:03,830 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 19:12:04] 2026-01-16 19:12:03,844 [wrapper] pilotpid: 2115785
[2026-01-16 19:12:04] 2026-01-16 19:12:03,850 [wrapper] Pilot exit status: 0
[2026-01-16 19:12:04] 2026-01-16 19:12:03,893 [wrapper] pandaids: 6970396001
[2026-01-16 19:12:04] 2026-01-16 19:12:04,172 [wrapper] cleanup supervisor_pilot 2606081 2115786
[2026-01-16 19:12:04] 2026-01-16 19:12:04,185 [wrapper] Test setup, not cleaning
[2026-01-16 19:12:04] 2026-01-16 19:12:04,202 [wrapper] apfmon messages muted
[2026-01-16 19:12:04] 2026-01-16 19:12:04,215 [wrapper] ==== wrapper stdout END ====
[2026-01-16 19:12:04] 2026-01-16 19:12:04,223 [wrapper] ==== wrapper stderr END ====
[2026-01-16 19:12:04]  *** Error codes and diagnostics ***
[2026-01-16 19:12:04]     "exeErrorCode": 0,
[2026-01-16 19:12:04]     "exeErrorDiag": "",
[2026-01-16 19:12:04]     "pilotErrorCode": 0,
[2026-01-16 19:12:04]     "pilotErrorDiag": "",
[2026-01-16 19:12:04]  *** Listing of results directory ***
[2026-01-16 19:12:04] total 736404
[2026-01-16 19:12:04] -rw-r--r-- 1 boinc boinc    579449 Jan 15 06:52 pilot3.tar.gz
[2026-01-16 19:12:04] -rw-r--r-- 1 boinc boinc      5112 Jan 15 06:55 queuedata.json
[2026-01-16 19:12:04] -rwx------ 1 boinc boinc     36322 Jan 15 06:55 runpilot2-wrapper.sh
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc       100 Jan 16 17:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 19:12:04] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 17:35 run_atlas
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc       105 Jan 16 17:35 job.xml
[2026-01-16 19:12:04] -rw-r--r-- 2 boinc boinc 594377107 Jan 16 17:35 EVNT.32794306._001862.pool.root.1
[2026-01-16 19:12:04] -rw-r--r-- 2 boinc boinc     15847 Jan 16 17:35 start_atlas.sh
[2026-01-16 19:12:04] drwxrwx--x 2 boinc boinc      4096 Jan 16 17:35 shared
[2026-01-16 19:12:04] -rw-r--r-- 2 boinc boinc    592406 Jan 16 17:35 input.tar.gz
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 17:35 init_data.xml
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc         0 Jan 16 17:35 boinc_setup_complete
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc         0 Jan 16 17:35 boinc_lockfile
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc      2509 Jan 16 17:36 pandaJob.out
[2026-01-16 19:12:04] -rw------- 1 boinc boinc   1004091 Jan 16 17:36 agis_schedconf.cvmfs.json
[2026-01-16 19:12:04] -rw------- 1 boinc boinc   1516246 Jan 16 17:36 agis_ddmendpoints.agis.ALL.json
[2026-01-16 19:12:04] drwx------ 5 boinc boinc      4096 Jan 16 17:36 pilot3
[2026-01-16 19:12:04] -rw------- 1 boinc boinc 153391355 Jan 16 19:10 HITS.48215263._047972.pool.root.1
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc       530 Jan 16 19:10 boinc_task_state.xml
[2026-01-16 19:12:04] -rw------- 1 boinc boinc      1020 Jan 16 19:11 memory_monitor_summary.json
[2026-01-16 19:12:04] -rw------- 1 boinc boinc    399681 Jan 16 19:11 log.48215263._047972.job.log.tgz.1
[2026-01-16 19:12:04] -rw------- 1 boinc boinc      7727 Jan 16 19:11 heartbeat.json
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 19:11 boinc_mmap_file
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc        27 Jan 16 19:11 wrapper_checkpoint.txt
[2026-01-16 19:12:04] -rw------- 1 boinc boinc        95 Jan 16 19:12 pilot_heartbeat.json
[2026-01-16 19:12:04] -rw------- 1 boinc boinc       823 Jan 16 19:12 pilotlog.txt
[2026-01-16 19:12:04] -rw------- 1 boinc boinc    793372 Jan 16 19:12 log.48215263._047972.job.log.1
[2026-01-16 19:12:04] -rw------- 1 boinc boinc       357 Jan 16 19:12 output.list
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc       620 Jan 16 19:12 runtime_log
[2026-01-16 19:12:04] -rw------- 1 boinc boinc   1208320 Jan 16 19:12 result.tar.gz
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 19:12 runtime_log.err
[2026-01-16 19:12:04] -rw------- 1 boinc boinc       652 Jan 16 19:12 dZENDmnRW08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7KoKDmrWYhDn.diag
[2026-01-16 19:12:04] -rw-rw-r-- 1 boinc boinc     22209 Jan 16 19:12 stderr.txt
[2026-01-16 19:12:04] HITS file was successfully produced:
[2026-01-16 19:12:04] -rw------- 1 boinc boinc 153391355 Jan 16 19:10 shared/HITS.pool.root.1
[2026-01-16 19:12:04]  *** Contents of shared directory: ***
[2026-01-16 19:12:04] total 732032
[2026-01-16 19:12:04] -rw-r--r-- 2 boinc boinc 594377107 Jan 16 17:35 ATLAS.root_0
[2026-01-16 19:12:04] -rw-r--r-- 2 boinc boinc     15847 Jan 16 17:35 start_atlas.sh
[2026-01-16 19:12:04] -rw-r--r-- 2 boinc boinc    592406 Jan 16 17:35 input.tar.gz
[2026-01-16 19:12:04] -rw------- 1 boinc boinc 153391355 Jan 16 19:10 HITS.pool.root.1
[2026-01-16 19:12:04] -rw------- 1 boinc boinc   1208320 Jan 16 19:12 result.tar.gz
19:12:05 (2111579): run_atlas exited; CPU time 30700.907058
19:12:05 (2111579): called boinc_finish(0)

</stderr_txt>
]]>

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