Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:15:32 (1975667): wrapper (7.7.26015): starting
17:15:32 (1975667): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 17:15:32] Arguments: --nthreads 12
[2026-01-16 17:15:32] Threads: 12
[2026-01-16 17:15:32] Checking for CVMFS
[2026-01-16 17:15:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 17:15:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 17:15:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 17:15:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 17:15:34] 2.13.3.0 40677 10763 72108 155214 1 236 4059745 4096001 19368 130560 0 89374573 99.983 1163162 228 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 17:15:34] CVMFS is ok
[2026-01-16 17:15:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 17:15:34] Checking for apptainer binary...
[2026-01-16 17:15:34] apptainer is not installed, using version from CVMFS
[2026-01-16 17:15:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 17:15:35] epyc7v12
[2026-01-16 17:15:35] apptainer works
[2026-01-16 17:15:35] Set ATHENA_PROC_NUMBER=12
[2026-01-16 17:15:35] Set ATHENA_CORE_NUMBER=12
[2026-01-16 17:15:36] Starting ATLAS job with PandaID=6970418300
[2026-01-16 17:15:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31426/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 18:52:22]  *** The last 200 lines of the pilot log: ***
[2026-01-16 18:52:22] 2026-01-16 18:51:02,924 | INFO     | transferring file log.48215263._048621.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31426/slots/1/PanDA_Pilot-6970418300/log.48215263._048621.job.log.tgz.1 t
[2026-01-16 18:52:22] 2026-01-16 18:51:02,924 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31426/slots/1/PanDA_Pilot-6970418300/log.48215263._048621.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-16 18:52:22] 2026-01-16 18:51:02,990 | INFO     | adding to output.list: log.48215263._048621.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/a1/log.48215263._048621.job.log.tg
[2026-01-16 18:52:22] 2026-01-16 18:51:02,991 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-16 18:52:22] 2026-01-16 18:51:02,991 | INFO     | summary of transferred files:
[2026-01-16 18:52:22] 2026-01-16 18:51:02,991 | INFO     |  -- lfn=log.48215263._048621.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 18:52:22] 2026-01-16 18:51:02,991 | INFO     | stage-out finished correctly
[2026-01-16 18:52:22] 2026-01-16 18:51:03,009 | INFO     | time since job start (5697s) is within the limit (349056.0s)
[2026-01-16 18:52:22] 2026-01-16 18:51:03,139 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 18:52:22] 2026-01-16 18:51:03,544 | INFO     | monitor loop #376: job 0:6970418300 is in state 'finished'
[2026-01-16 18:52:22] 2026-01-16 18:51:03,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 18:52:22] 2026-01-16 18:51:03,951 | INFO     | job 6970418300 has state=finished
[2026-01-16 18:52:22] 2026-01-16 18:51:03,952 | INFO     | preparing for final server update for job 6970418300 in state='finished'
[2026-01-16 18:52:22] 2026-01-16 18:51:03,952 | INFO     | this job has now completed (state=finished)
[2026-01-16 18:52:22] 2026-01-16 18:51:03,952 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 18:52:22] 2026-01-16 18:51:03,952 | INFO     | log transfer has been attempted: DONE
[2026-01-16 18:52:22] 2026-01-16 18:51:03,953 | INFO     | job 6970418300 has finished - writing final server update
[2026-01-16 18:52:22] 2026-01-16 18:51:03,953 | INFO     | total number of processed events: 400 (read)
[2026-01-16 18:52:22] 2026-01-16 18:51:03,954 | INFO     | executing command: lscpu
[2026-01-16 18:52:22] 2026-01-16 18:51:04,090 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 18:52:22] 2026-01-16 18:51:05,015 | INFO     | time since job start (5699s) is within the limit (349056.0s)
[2026-01-16 18:52:22] 2026-01-16 18:51:06,047 | INFO     | monitor loop #377: job 0:6970418300 is in state 'finished'
[2026-01-16 18:52:22] 2026-01-16 18:51:06,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 18:52:22] 2026-01-16 18:51:07,442 | INFO     | PID=1980449 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 18:52:22] 2026-01-16 18:51:07,442 | INFO     | .. there are 22 such processes running
[2026-01-16 18:52:22] 2026-01-16 18:51:08,443 | INFO     | time since job start (5702s) is within the limit (349056.0s)
[2026-01-16 18:52:22] 2026-01-16 18:51:08,550 | INFO     | monitor loop #378: job 0:6970418300 is in state 'finished'
[2026-01-16 18:52:22] 2026-01-16 18:51:08,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 18:52:22] 2026-01-16 18:51:10,452 | INFO     | time since job start (5704s) is within the limit (349056.0s)
[2026-01-16 18:52:22] 2026-01-16 18:51:11,055 | INFO     | monitor loop #379: job 0:6970418300 is in state 'finished'
[2026-01-16 18:52:22] 2026-01-16 18:51:11,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 18:52:22] 2026-01-16 18:51:12,460 | INFO     | time since job start (5706s) is within the limit (349056.0s)
[2026-01-16 18:52:22] 2026-01-16 18:51:13,558 | INFO     | monitor loop #380: job 0:6970418300 is in state 'finished'
[2026-01-16 18:52:22] 2026-01-16 18:51:13,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 18:52:22] 2026-01-16 18:51:14,466 | INFO     | time since job start (5708s) is within the limit (349056.0s)
[2026-01-16 18:52:22] 2026-01-16 18:51:16,067 | INFO     | monitor loop #381: job 0:6970418300 is in state 'finished'
[2026-01-16 18:52:22] 2026-01-16 18:51:16,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 18:52:22] 2026-01-16 18:51:16,471 | INFO     | time since job start (5710s) is within the limit (349056.0s)
[2026-01-16 18:52:22] 2026-01-16 18:51:17,952 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 18:52:22] 2026-01-16 18:51:17,997 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2397.1657734375003
[2026-01-16 18:52:22] 2026-01-16 18:51:18,025 | INFO     | using path: /opt/boinc/instance_homes/boinc_31426/slots/1/PanDA_Pilot-6970418300/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 18:52:22] 2026-01-16 18:51:18,026 | INFO     | extracted standard info from prmon json
[2026-01-16 18:52:22] 2026-01-16 18:51:18,026 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 18:52:22] 2026-01-16 18:51:18,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 18:52:22] 2026-01-16 18:51:18,026 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 18:52:22] 2026-01-16 18:51:18,026 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 18:52:22] 2026-01-16 18:51:18,029 | INFO     | fitting pss+swap vs Time
[2026-01-16 18:52:22] 2026-01-16 18:51:18,029 | INFO     | sum of square deviations: 197210737.20930234
[2026-01-16 18:52:22] 2026-01-16 18:51:18,030 | INFO     | sum of deviations: 1343768171.7906976
[2026-01-16 18:52:22] 2026-01-16 18:51:18,030 | INFO     | mean x: 1768586740.5581396
[2026-01-16 18:52:22] 2026-01-16 18:51:18,030 | INFO     | mean y: 2728220.9418604653
[2026-01-16 18:52:22] 2026-01-16 18:51:18,030 | INFO     | intersect: -12048190530.45855
[2026-01-16 18:52:22] 2026-01-16 18:51:18,030 | INFO     | chi2: 0.09330620392955867
[2026-01-16 18:52:22] 2026-01-16 18:51:18,030 | INFO     | current memory leak: 6.81 B/s (using 86 data points, chi2=0.09)
[2026-01-16 18:52:22] 2026-01-16 18:51:18,031 | INFO     | could have reported an average CPU frequency of 2399 MHz (7 samples)
[2026-01-16 18:52:22] 2026-01-16 18:51:18,031 | INFO     | ..............................
[2026-01-16 18:52:22] 2026-01-16 18:51:18,031 | INFO     | . Timing measurements:
[2026-01-16 18:52:22] 2026-01-16 18:51:18,031 | INFO     | . get job = 0 s
[2026-01-16 18:52:22] 2026-01-16 18:51:18,031 | INFO     | . initial setup = 2 s
[2026-01-16 18:52:22] 2026-01-16 18:51:18,031 | INFO     | . payload setup = 23 s
[2026-01-16 18:52:22] 2026-01-16 18:51:18,031 | INFO     | . stage-in = 0 s
[2026-01-16 18:52:22] 2026-01-16 18:51:18,031 | INFO     | . payload execution = 5628 s
[2026-01-16 18:52:22] 2026-01-16 18:51:18,032 | INFO     | . stage-out = 1 s
[2026-01-16 18:52:22] 2026-01-16 18:51:18,032 | INFO     | . log creation = 0 s
[2026-01-16 18:52:22] 2026-01-16 18:51:18,032 | INFO     | ..............................
[2026-01-16 18:52:22] 2026-01-16 18:51:18,386 | INFO     | 
[2026-01-16 18:52:22] 2026-01-16 18:51:18,386 | INFO     | job summary report
[2026-01-16 18:52:22] 2026-01-16 18:51:18,386 | INFO     | --------------------------------------------------
[2026-01-16 18:52:22] 2026-01-16 18:51:18,386 | INFO     | PanDA job id: 6970418300
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | task id: 48215263
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | errors: (none)
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | pilot state: finished 
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | transexitcode: 0
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | exeerrorcode: 0
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | exeerrordiag: 
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | exitcode: 0
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | exitmsg: OK
[2026-01-16 18:52:22] 2026-01-16 18:51:18,387 | INFO     | cpuconsumptiontime: 31774 s
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | nevents: 400
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | neventsw: 0
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | pid: 1987744
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | pgrp: 1987744
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | corecount: 12
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | event service: False
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | sizes: {0: 2283121, 1: 2283829, 2: 2284028, 13: 2284028, 16: 2284346, 24: 2284374, 5655: 2311229, 5656: 2311228, 5659: 2320384, 5674: 2320522}
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | --------------------------------------------------
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | 
[2026-01-16 18:52:22] 2026-01-16 18:51:18,388 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31426/slots/1
[2026-01-16 18:52:22] 2026-01-16 18:51:18,447 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,447 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,447 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,447 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,449 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,449 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,449 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,450 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,450 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,450 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 18:52:22] 2026-01-16 18:51:18,450 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,450 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 18:52:22] 2026-01-16 18:51:18,450 | INFO     | job 6970418300 has completed (purged errors)
[2026-01-16 18:52:22] 2026-01-16 18:51:18,450 | INFO     | overall cleanup function is called
[2026-01-16 18:52:22] 2026-01-16 18:51:19,467 | INFO     | --- collectZombieJob: --- 10, [1987744]
[2026-01-16 18:52:22] 2026-01-16 18:51:19,467 | INFO     | zombie collector waiting for pid 1987744
[2026-01-16 18:52:22] 2026-01-16 18:51:19,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 18:52:22] 2026-01-16 18:51:19,467 | INFO     | collected zombie processes
[2026-01-16 18:52:22] 2026-01-16 18:51:19,468 | INFO     | will attempt to kill all subprocesses of pid=1987744
[2026-01-16 18:52:22] 2026-01-16 18:51:20,696 | INFO     | process IDs to be killed: [1987744] (in reverse order)
[2026-01-16 18:52:22] 2026-01-16 18:51:21,253 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 18:52:22] 2026-01-16 18:51:21,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 18:52:22] 2026-01-16 18:51:21,288 | INFO     | did not find any defunct processes belonging to 1987744
[2026-01-16 18:52:22] 2026-01-16 18:51:21,329 | INFO     | did not find any defunct processes belonging to 1987744
[2026-01-16 18:52:22] 2026-01-16 18:51:21,330 | INFO     | ready for new job
[2026-01-16 18:52:22] 2026-01-16 18:51:21,330 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 18:52:22] 2026-01-16 18:51:21,333 | INFO     | ***************************************
[2026-01-16 18:52:22] 2026-01-16 18:51:21,333 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 18:52:22] 2026-01-16 18:51:21,333 | INFO     | ***************************************
[2026-01-16 18:52:22] 2026-01-16 18:51:21,333 | INFO     | 
[2026-01-16 18:52:22] 2026-01-16 18:51:21,354 | INFO     | architecture information:
[2026-01-16 18:52:22] 2026-01-16 18:51:21,357 | INFO     | executing command: cat /etc/os-release
[2026-01-16 18:52:22] 2026-01-16 18:51:21,401 | INFO     | cat /etc/os-release:
[2026-01-16 18:52:22] NAME="CentOS Linux"
[2026-01-16 18:52:22] VERSION="7 (Core)"
[2026-01-16 18:52:22] ID="centos"
[2026-01-16 18:52:22] ID_LIKE="rhel fedora"
[2026-01-16 18:52:22] VERSION_ID="7"
[2026-01-16 18:52:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 18:52:22] ANSI_COLOR="0;31"
[2026-01-16 18:52:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 18:52:22] HOME_URL="https://www.centos.org/"
[2026-01-16 18:52:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 18:52:22] 
[2026-01-16 18:52:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 18:52:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 18:52:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 18:52:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 18:52:22] 
[2026-01-16 18:52:22] 2026-01-16 18:51:21,402 | INFO     | ***************************************
[2026-01-16 18:52:22] 2026-01-16 18:51:21,905 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31426/slots/1
[2026-01-16 18:52:22] 2026-01-16 18:51:21,959 | INFO     | sufficient remaining disk space (327188217856 B)
[2026-01-16 18:52:22] 2026-01-16 18:51:21,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 18:52:22] 2026-01-16 18:51:21,959 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 18:52:22] 2026-01-16 18:51:21,960 | INFO     | update_server=False
[2026-01-16 18:52:22] 2026-01-16 18:51:21,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 18:52:22] 2026-01-16 18:51:21,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 18:52:22] 2026-01-16 18:51:22,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 18:52:22] 2026-01-16 18:51:22,087 | INFO     | aborting loop
[2026-01-16 18:52:22] 2026-01-16 18:51:22,700 | INFO     | all job control threads have been joined
[2026-01-16 18:52:22] 2026-01-16 18:51:22,731 | INFO     | all payload control threads have been joined
[2026-01-16 18:52:22] 2026-01-16 18:51:22,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 18:52:22] 2026-01-16 18:51:22,907 | INFO     | all data control threads have been joined
[2026-01-16 18:52:22] 2026-01-16 18:51:22,965 | INFO     | [job] retrieve thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,092 | INFO     | [job] job monitor thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 18:52:22] 2026-01-16 18:51:23,218 | INFO     | [data] copytool_in thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,219 | INFO     | [job] validate thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,395 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,551 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,705 | INFO     | [job] control thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,736 | INFO     | [payload] control thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,840 | INFO     | [payload] validate_post thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,912 | INFO     | [data] control thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:23,965 | INFO     | [data] copytool_out thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:24,073 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:24,214 | INFO     | [job] queue monitor thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:24,218 | INFO     | [payload] failed_post thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:24,402 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:26,842 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 18:52:22] 2026-01-16 18:51:50,978 | INFO     | PID=1980449 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 18:52:22] 2026-01-16 18:51:50,979 | INFO     | .. there are 22 such processes running
[2026-01-16 18:52:22] 2026-01-16 18:51:50,979 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 18:52:22] 2026-01-16 18:51:50,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 18:52:22] 2026-01-16 18:51:50,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 18:52:22] 2026-01-16 18:52:15,680 | INFO     | [monitor] cgroup control has ended
[2026-01-16 18:52:22] 2026-01-16 18:52:16,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132924300441408)>', '<ExcThread(monitor, started 132923894245120)>']
[2026-01-16 18:52:22] 2026-01-16 18:52:17,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 18:52:22] 2026-01-16 18:52:17,122 | INFO     | [monitor] control thread has ended
[2026-01-16 18:52:22] 2026-01-16 18:52:21,443 | INFO     | all workflow threads have been joined
[2026-01-16 18:52:22] 2026-01-16 18:52:21,443 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 18:52:22] 2026-01-16 18:52:21,444 | INFO     | traces error code: 0
[2026-01-16 18:52:22] 2026-01-16 18:52:21,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 18:52:22] 2026-01-16 18:52:21,989 [wrapper] ==== pilot stdout END ====
[2026-01-16 18:52:22] 2026-01-16 18:52:21,998 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 18:52:22] 2026-01-16 18:52:22,008 [wrapper] pilotpid: 1980449
[2026-01-16 18:52:22] 2026-01-16 18:52:22,022 [wrapper] Pilot exit status: 0
[2026-01-16 18:52:22] 2026-01-16 18:52:22,054 [wrapper] pandaids: 6970418300
[2026-01-16 18:52:22] 2026-01-16 18:52:22,208 [wrapper] cleanup supervisor_pilot 2507336 1980450
[2026-01-16 18:52:22] 2026-01-16 18:52:22,220 [wrapper] Test setup, not cleaning
[2026-01-16 18:52:22] 2026-01-16 18:52:22,238 [wrapper] apfmon messages muted
[2026-01-16 18:52:22] 2026-01-16 18:52:22,247 [wrapper] ==== wrapper stdout END ====
[2026-01-16 18:52:22] 2026-01-16 18:52:22,256 [wrapper] ==== wrapper stderr END ====
[2026-01-16 18:52:22]  *** Error codes and diagnostics ***
[2026-01-16 18:52:22]     "exeErrorCode": 0,
[2026-01-16 18:52:22]     "exeErrorDiag": "",
[2026-01-16 18:52:22]     "pilotErrorCode": 0,
[2026-01-16 18:52:22]     "pilotErrorDiag": "",
[2026-01-16 18:52:22]  *** Listing of results directory ***
[2026-01-16 18:52:22] total 748572
[2026-01-16 18:52:22] -rw-r--r-- 1 boinc boinc    579449 Jan 15 06:52 pilot3.tar.gz
[2026-01-16 18:52:22] -rwx------ 1 boinc boinc     36322 Jan 15 06:53 runpilot2-wrapper.sh
[2026-01-16 18:52:22] -rw-r--r-- 1 boinc boinc      5112 Jan 15 06:55 queuedata.json
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc       100 Jan 16 17:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 18:52:22] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 17:15 run_atlas
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc       105 Jan 16 17:15 job.xml
[2026-01-16 18:52:22] -rw-r--r-- 2 boinc boinc 600770340 Jan 16 17:15 EVNT.32794306._001888.pool.root.1
[2026-01-16 18:52:22] -rw-r--r-- 2 boinc boinc     15847 Jan 16 17:15 start_atlas.sh
[2026-01-16 18:52:22] drwxrwx--x 2 boinc boinc      4096 Jan 16 17:15 shared
[2026-01-16 18:52:22] -rw-r--r-- 2 boinc boinc    592399 Jan 16 17:15 input.tar.gz
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 17:15 init_data.xml
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc         0 Jan 16 17:15 boinc_setup_complete
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc         0 Jan 16 17:15 boinc_lockfile
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc      2507 Jan 16 17:15 pandaJob.out
[2026-01-16 18:52:22] -rw------- 1 boinc boinc   1004091 Jan 16 17:16 agis_schedconf.cvmfs.json
[2026-01-16 18:52:22] -rw------- 1 boinc boinc   1516246 Jan 16 17:16 agis_ddmendpoints.agis.ALL.json
[2026-01-16 18:52:22] drwx------ 5 boinc boinc      4096 Jan 16 17:16 pilot3
[2026-01-16 18:52:22] -rw------- 1 boinc boinc 159471942 Jan 16 18:50 HITS.48215263._048621.pool.root.1
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc       531 Jan 16 18:50 boinc_task_state.xml
[2026-01-16 18:52:22] -rw------- 1 boinc boinc      1021 Jan 16 18:50 memory_monitor_summary.json
[2026-01-16 18:52:22] -rw------- 1 boinc boinc    385804 Jan 16 18:51 log.48215263._048621.job.log.tgz.1
[2026-01-16 18:52:22] -rw------- 1 boinc boinc      7730 Jan 16 18:51 heartbeat.json
[2026-01-16 18:52:22] -rw------- 1 boinc boinc        95 Jan 16 18:51 pilot_heartbeat.json
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc        27 Jan 16 18:52 wrapper_checkpoint.txt
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 18:52 boinc_mmap_file
[2026-01-16 18:52:22] -rw------- 1 boinc boinc      4848 Jan 16 18:52 pilotlog.txt
[2026-01-16 18:52:22] -rw------- 1 boinc boinc    795553 Jan 16 18:52 log.48215263._048621.job.log.1
[2026-01-16 18:52:22] -rw------- 1 boinc boinc       357 Jan 16 18:52 output.list
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc       620 Jan 16 18:52 runtime_log
[2026-01-16 18:52:22] -rw------- 1 boinc boinc   1198080 Jan 16 18:52 result.tar.gz
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 18:52 runtime_log.err
[2026-01-16 18:52:22] -rw------- 1 boinc boinc       652 Jan 16 18:52 lr0LDm9PW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNRuKDmiQnQYm.diag
[2026-01-16 18:52:22] -rw-rw-r-- 1 boinc boinc     22475 Jan 16 18:52 stderr.txt
[2026-01-16 18:52:22] HITS file was successfully produced:
[2026-01-16 18:52:22] -rw------- 1 boinc boinc 159471942 Jan 16 18:50 shared/HITS.pool.root.1
[2026-01-16 18:52:22]  *** Contents of shared directory: ***
[2026-01-16 18:52:22] total 744204
[2026-01-16 18:52:22] -rw-r--r-- 2 boinc boinc 600770340 Jan 16 17:15 ATLAS.root_0
[2026-01-16 18:52:22] -rw-r--r-- 2 boinc boinc     15847 Jan 16 17:15 start_atlas.sh
[2026-01-16 18:52:22] -rw-r--r-- 2 boinc boinc    592399 Jan 16 17:15 input.tar.gz
[2026-01-16 18:52:22] -rw------- 1 boinc boinc 159471942 Jan 16 18:50 HITS.pool.root.1
[2026-01-16 18:52:22] -rw------- 1 boinc boinc   1198080 Jan 16 18:52 result.tar.gz
18:52:24 (1975667): run_atlas exited; CPU time 32086.434854
18:52:24 (1975667): called boinc_finish(0)

</stderr_txt>
]]>

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