Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:59:53 (16074): wrapper (7.7.26015): starting
04:59:53 (16074): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 04:59:53] Arguments: --nthreads 8
[2026-01-15 04:59:53] Threads: 8
[2026-01-15 04:59:53] Checking for CVMFS
[2026-01-15 04:59:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 04:59:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 04:59:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 04:59:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 04:59:54] 2.11.2.0 2827 114930 83108 155162 2 58 19342261 20275200 1 130560 0 23864549 99.752 7821375 30064 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 04:59:54] CVMFS is ok
[2026-01-15 04:59:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 04:59:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 04:59:54] Further information can be found at the LHC@home message board.
[2026-01-15 04:59:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 04:59:54] Checking for apptainer binary...
[2026-01-15 04:59:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 04:59:54] Running /usr/bin/apptainer --version
[2026-01-15 04:59:54] apptainer version 1.3.2-1.el7
[2026-01-15 04:59:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 04:59:56] c-204-30.aglt2.org
[2026-01-15 04:59:56] apptainer works
[2026-01-15 04:59:56] Set ATHENA_PROC_NUMBER=8
[2026-01-15 04:59:56] Set ATHENA_CORE_NUMBER=8
[2026-01-15 04:59:56] Starting ATLAS job with PandaID=6970417603
[2026-01-15 04:59:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 06:19:26]  *** The last 200 lines of the pilot log: ***
[2026-01-15 06:19:26] ]
[2026-01-15 06:19:26] 2026-01-15 11:18:13,383 | INFO     | transferring file log.48215263._048423.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6970417603/log.48215263._048423.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 06:19:26] 2026-01-15 11:18:13,383 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6970417603/log.48215263._048423.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._048423.job
[2026-01-15 06:19:26] 2026-01-15 11:18:13,409 | INFO     | adding to output.list: log.48215263._048423.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/62/log.48215263._048423.job.log.tg
[2026-01-15 06:19:26] 2026-01-15 11:18:13,411 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 06:19:26] 2026-01-15 11:18:13,411 | INFO     | summary of transferred files:
[2026-01-15 06:19:26] 2026-01-15 11:18:13,411 | INFO     |  -- lfn=log.48215263._048423.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 06:19:26] 2026-01-15 11:18:13,412 | INFO     | stage-out finished correctly
[2026-01-15 06:19:26] 2026-01-15 11:18:13,505 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 06:19:26] 2026-01-15 11:18:13,591 | INFO     | job 6970417603 has state=finished
[2026-01-15 06:19:26] 2026-01-15 11:18:13,591 | INFO     | preparing for final server update for job 6970417603 in state='finished'
[2026-01-15 06:19:26] 2026-01-15 11:18:13,592 | INFO     | this job has now completed (state=finished)
[2026-01-15 06:19:26] 2026-01-15 11:18:13,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 06:19:26] 2026-01-15 11:18:13,592 | INFO     | log transfer has been attempted: DONE
[2026-01-15 06:19:26] 2026-01-15 11:18:13,593 | INFO     | job 6970417603 has finished - writing final server update
[2026-01-15 06:19:26] 2026-01-15 11:18:13,593 | INFO     | total number of processed events: 400 (read)
[2026-01-15 06:19:26] 2026-01-15 11:18:13,594 | INFO     | executing command: lscpu
[2026-01-15 06:19:26] 2026-01-15 11:18:13,623 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 06:19:26] 2026-01-15 11:18:14,310 | INFO     | time since job start (4681s) is within the limit (349056.0s)
[2026-01-15 06:19:26] 2026-01-15 11:18:16,315 | INFO     | time since job start (4683s) is within the limit (349056.0s)
[2026-01-15 06:19:26] 2026-01-15 11:18:17,009 | WARNING  | process 26436 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 06:19:26] 2026-01-15 11:18:17,010 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970417603/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 06:19:26] 2026-01-15 11:18:17,011 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970417603/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 06:19:26] 2026-01-15 11:18:17,011 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-15 06:19:26] 2026-01-15 11:18:17,011 | WARNING  | maxPSS not found in memory monitor output
[2026-01-15 06:19:26] 2026-01-15 11:18:17,012 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3537693 B
[2026-01-15 06:19:26] 2026-01-15 11:18:17,012 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16072 B
[2026-01-15 06:19:26] 2026-01-15 11:18:17,012 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 06:19:26] 2026-01-15 11:18:18,357 | INFO     | time since job start (4685s) is within the limit (349056.0s)
[2026-01-15 06:19:26] 2026-01-15 11:18:20,362 | INFO     | time since job start (4687s) is within the limit (349056.0s)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,205 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 06:19:26] 2026-01-15 11:18:21,213 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-15 06:19:26] 2026-01-15 11:18:21,215 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970417603/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,216 | INFO     | extracted standard info from prmon json
[2026-01-15 06:19:26] 2026-01-15 11:18:21,216 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 06:19:26] 2026-01-15 11:18:21,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 06:19:26] 2026-01-15 11:18:21,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 06:19:26] 2026-01-15 11:18:21,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 06:19:26] 2026-01-15 11:18:21,220 | INFO     | fitting pss+swap vs Time
[2026-01-15 06:19:26] 2026-01-15 11:18:21,220 | INFO     | sum of square deviations: 106336877.5
[2026-01-15 06:19:26] 2026-01-15 11:18:21,220 | INFO     | sum of deviations: 725464338.0
[2026-01-15 06:19:26] 2026-01-15 11:18:21,221 | INFO     | mean x: 1768473654.5
[2026-01-15 06:19:26] 2026-01-15 11:18:21,221 | INFO     | mean y: 2542203.3714285716
[2026-01-15 06:19:26] 2026-01-15 11:18:21,221 | INFO     | intersect: -12062553172.710901
[2026-01-15 06:19:26] 2026-01-15 11:18:21,221 | INFO     | chi2: 0.0023592741621700376
[2026-01-15 06:19:26] 2026-01-15 11:18:21,221 | INFO     | current memory leak: 6.82 B/s (using 70 data points, chi2=0.00)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,222 | INFO     | could have reported an average CPU frequency of 1892 MHz (6 samples)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,222 | INFO     | ..............................
[2026-01-15 06:19:26] 2026-01-15 11:18:21,222 | INFO     | . Timing measurements:
[2026-01-15 06:19:26] 2026-01-15 11:18:21,222 | INFO     | . get job = 0 s
[2026-01-15 06:19:26] 2026-01-15 11:18:21,222 | INFO     | . initial setup = 2 s
[2026-01-15 06:19:26] 2026-01-15 11:18:21,223 | INFO     | . payload setup = 8 s
[2026-01-15 06:19:26] 2026-01-15 11:18:21,223 | INFO     | . stage-in = 0 s
[2026-01-15 06:19:26] 2026-01-15 11:18:21,223 | INFO     | . payload execution = 4648 s
[2026-01-15 06:19:26] 2026-01-15 11:18:21,223 | INFO     | . stage-out = 0 s
[2026-01-15 06:19:26] 2026-01-15 11:18:21,223 | INFO     | . log creation = 0 s
[2026-01-15 06:19:26] 2026-01-15 11:18:21,223 | INFO     | ..............................
[2026-01-15 06:19:26] 2026-01-15 11:18:21,236 | INFO     | sufficient remaining disk space (17828937728 B)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,237 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,319 | INFO     | 
[2026-01-15 06:19:26] 2026-01-15 11:18:21,319 | INFO     | job summary report
[2026-01-15 06:19:26] 2026-01-15 11:18:21,319 | INFO     | --------------------------------------------------
[2026-01-15 06:19:26] 2026-01-15 11:18:21,319 | INFO     | PanDA job id: 6970417603
[2026-01-15 06:19:26] 2026-01-15 11:18:21,320 | INFO     | task id: 48215263
[2026-01-15 06:19:26] 2026-01-15 11:18:21,320 | INFO     | errors: (none)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,320 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 06:19:26] 2026-01-15 11:18:21,320 | INFO     | pilot state: finished 
[2026-01-15 06:19:26] 2026-01-15 11:18:21,320 | INFO     | transexitcode: 0
[2026-01-15 06:19:26] 2026-01-15 11:18:21,320 | INFO     | exeerrorcode: 0
[2026-01-15 06:19:26] 2026-01-15 11:18:21,320 | INFO     | exeerrordiag: 
[2026-01-15 06:19:26] 2026-01-15 11:18:21,321 | INFO     | exitcode: 0
[2026-01-15 06:19:26] 2026-01-15 11:18:21,321 | INFO     | exitmsg: OK
[2026-01-15 06:19:26] 2026-01-15 11:18:21,321 | INFO     | cpuconsumptiontime: 33594 s
[2026-01-15 06:19:26] 2026-01-15 11:18:21,321 | INFO     | nevents: 400
[2026-01-15 06:19:26] 2026-01-15 11:18:21,321 | INFO     | neventsw: 0
[2026-01-15 06:19:26] 2026-01-15 11:18:21,321 | INFO     | pid: 26436
[2026-01-15 06:19:26] 2026-01-15 11:18:21,322 | INFO     | pgrp: 26436
[2026-01-15 06:19:26] 2026-01-15 11:18:21,322 | INFO     | corecount: 8
[2026-01-15 06:19:26] 2026-01-15 11:18:21,322 | INFO     | event service: False
[2026-01-15 06:19:26] 2026-01-15 11:18:21,322 | INFO     | sizes: {0: 2283900, 1: 2283900, 6: 2284190, 11: 2284218, 4660: 2310349, 4661: 2310348, 4663: 2319586, 4670: 2319724}
[2026-01-15 06:19:26] 2026-01-15 11:18:21,322 | INFO     | --------------------------------------------------
[2026-01-15 06:19:26] 2026-01-15 11:18:21,322 | INFO     | 
[2026-01-15 06:19:26] 2026-01-15 11:18:21,323 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 06:19:26] 2026-01-15 11:18:21,327 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6970417603: 3836936 B (within 4404019200 B limit)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,327 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6970417603/HITS.48215263._048423.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,328 | INFO     | total size of present files: 0 B (workdir size: 3836936 B)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,328 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6970417603/HITS.48215263._048423.pool.root.1 since it does not exist
[2026-01-15 06:19:26] 2026-01-15 11:18:21,407 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,408 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,408 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,408 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,409 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,410 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,410 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,411 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 06:19:26] 2026-01-15 11:18:21,411 | INFO     | job 6970417603 has completed (purged errors)
[2026-01-15 06:19:26] 2026-01-15 11:18:21,411 | INFO     | overall cleanup function is called
[2026-01-15 06:19:26] 2026-01-15 11:18:21,427 | INFO     | number of running child processes to parent process 26436: 1
[2026-01-15 06:19:26] 2026-01-15 11:18:21,427 | INFO     | maximum number of monitored processes: 6
[2026-01-15 06:19:26] 2026-01-15 11:18:21,428 | INFO     | aborting job monitoring since job object (job id=6970417603) has expired
[2026-01-15 06:19:26] 2026-01-15 11:18:22,420 | INFO     | --- collectZombieJob: --- 10, [26436]
[2026-01-15 06:19:26] 2026-01-15 11:18:22,420 | INFO     | zombie collector waiting for pid 26436
[2026-01-15 06:19:26] 2026-01-15 11:18:22,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 06:19:26] 2026-01-15 11:18:22,420 | INFO     | collected zombie processes
[2026-01-15 06:19:26] 2026-01-15 11:18:22,420 | INFO     | will attempt to kill all subprocesses of pid=26436
[2026-01-15 06:19:26] 2026-01-15 11:18:22,510 | INFO     | process IDs to be killed: [26436] (in reverse order)
[2026-01-15 06:19:26] 2026-01-15 11:18:22,568 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 06:19:26] 2026-01-15 11:18:22,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 06:19:26] 2026-01-15 11:18:22,573 | INFO     | did not find any defunct processes belonging to 26436
[2026-01-15 06:19:26] 2026-01-15 11:18:22,575 | INFO     | did not find any defunct processes belonging to 26436
[2026-01-15 06:19:26] 2026-01-15 11:18:22,576 | INFO     | ready for new job
[2026-01-15 06:19:26] 2026-01-15 11:18:22,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 06:19:26] 2026-01-15 11:18:22,577 | INFO     | ***************************************
[2026-01-15 06:19:26] 2026-01-15 11:18:22,577 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 06:19:26] 2026-01-15 11:18:22,577 | INFO     | ***************************************
[2026-01-15 06:19:26] 2026-01-15 11:18:22,577 | INFO     | 
[2026-01-15 06:19:26] 2026-01-15 11:18:22,578 | INFO     | architecture information:
[2026-01-15 06:19:26] 2026-01-15 11:18:22,579 | INFO     | executing command: cat /etc/os-release
[2026-01-15 06:19:26] 2026-01-15 11:18:22,597 | INFO     | cat /etc/os-release:
[2026-01-15 06:19:26] NAME="CentOS Linux"
[2026-01-15 06:19:26] VERSION="7 (Core)"
[2026-01-15 06:19:26] ID="centos"
[2026-01-15 06:19:26] ID_LIKE="rhel fedora"
[2026-01-15 06:19:26] VERSION_ID="7"
[2026-01-15 06:19:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 06:19:26] ANSI_COLOR="0;31"
[2026-01-15 06:19:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 06:19:26] HOME_URL="https://www.centos.org/"
[2026-01-15 06:19:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 06:19:26] 
[2026-01-15 06:19:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 06:19:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 06:19:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 06:19:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 06:19:26] 
[2026-01-15 06:19:26] 2026-01-15 11:18:22,597 | INFO     | ***************************************
[2026-01-15 06:19:26] 2026-01-15 11:18:23,100 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 06:19:26] 2026-01-15 11:18:23,180 | INFO     | sufficient remaining disk space (17833132032 B)
[2026-01-15 06:19:26] 2026-01-15 11:18:23,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 06:19:26] 2026-01-15 11:18:23,181 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 06:19:26] 2026-01-15 11:18:23,181 | INFO     | update_server=False
[2026-01-15 06:19:26] 2026-01-15 11:18:23,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 06:19:26] 2026-01-15 11:18:23,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 06:19:26] 2026-01-15 11:18:23,182 | INFO     | aborting loop
[2026-01-15 06:19:26] 2026-01-15 11:18:23,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 06:19:26] 2026-01-15 11:18:23,640 | INFO     | all data control threads have been joined
[2026-01-15 06:19:26] 2026-01-15 11:18:24,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 06:19:26] 2026-01-15 11:18:24,049 | INFO     | all job control threads have been joined
[2026-01-15 06:19:26] 2026-01-15 11:18:24,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 06:19:26] 2026-01-15 11:18:24,136 | INFO     | all payload control threads have been joined
[2026-01-15 06:19:26] 2026-01-15 11:18:24,187 | INFO     | [job] retrieve thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:24,187 | INFO     | [job] job monitor thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:24,188 | INFO     | [job] queue monitor thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:24,350 | INFO     | [data] copytool_in thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:24,350 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:24,352 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:24,646 | INFO     | [data] control thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:24,696 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:24,734 | INFO     | [payload] failed_post thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:24,904 | INFO     | [job] validate thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:25,054 | INFO     | [job] control thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:25,141 | INFO     | [payload] control thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:25,307 | INFO     | [payload] validate_post thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:25,342 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:26,025 | INFO     | [data] copytool_out thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:28,104 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 06:19:26] 2026-01-15 11:18:53,562 | INFO     | PID=19979 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 06:19:26] 2026-01-15 11:18:53,563 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 06:19:26] 2026-01-15 11:18:53,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 06:19:26] 2026-01-15 11:18:53,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 06:19:26] 2026-01-15 11:19:20,581 | INFO     | [monitor] cgroup control has ended
[2026-01-15 06:19:26] 2026-01-15 11:19:20,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057802893120)>', '<ExcThread(monitor, started 140056853468928)>']
[2026-01-15 06:19:26] 2026-01-15 11:19:21,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 06:19:26] 2026-01-15 11:19:21,704 | INFO     | [monitor] control thread has ended
[2026-01-15 06:19:26] 2026-01-15 11:19:25,824 | INFO     | all workflow threads have been joined
[2026-01-15 06:19:26] 2026-01-15 11:19:25,863 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 06:19:26] 2026-01-15 11:19:25,864 | INFO     | traces error code: 0
[2026-01-15 06:19:26] 2026-01-15 11:19:25,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 06:19:26] 2026-01-15 11:19:25,973 [wrapper] ==== pilot stdout END ====
[2026-01-15 06:19:26] 2026-01-15 11:19:25,978 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 06:19:26] 2026-01-15 11:19:25,983 [wrapper] pilotpid: 19979
[2026-01-15 06:19:26] 2026-01-15 11:19:25,988 [wrapper] Pilot exit status: 0
[2026-01-15 06:19:26] 2026-01-15 11:19:26,008 [wrapper] pandaids: 6970417603
[2026-01-15 06:19:26] 2026-01-15 11:19:26,059 [wrapper] cleanup supervisor_pilot  7492 19980
[2026-01-15 06:19:26] 2026-01-15 11:19:26,064 [wrapper] Test setup, not cleaning
[2026-01-15 06:19:26] 2026-01-15 11:19:26,069 [wrapper] apfmon messages muted
[2026-01-15 06:19:26] 2026-01-15 11:19:26,074 [wrapper] ==== wrapper stdout END ====
[2026-01-15 06:19:26] 2026-01-15 11:19:26,079 [wrapper] ==== wrapper stderr END ====
[2026-01-15 06:19:26]  *** Error codes and diagnostics ***
[2026-01-15 06:19:26]     "exeErrorCode": 0,
[2026-01-15 06:19:26]     "exeErrorDiag": "",
[2026-01-15 06:19:26]     "pilotErrorCode": 0,
[2026-01-15 06:19:26]     "pilotErrorDiag": "",
[2026-01-15 06:19:26]  *** Listing of results directory ***
[2026-01-15 06:19:26] total 728604
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 06:19:26] -rwx------ 1 boincer umatlas     36322 Jan 15 01:53 runpilot2-wrapper.sh
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 01:55 queuedata.json
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas       100 Jan 15 04:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 06:19:26] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 04:59 run_atlas
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas       105 Jan 15 04:59 job.xml
[2026-01-15 06:19:26] -rw-r--r-- 2 boincer umatlas 594612323 Jan 15 04:59 EVNT.32794306._000805.pool.root.1
[2026-01-15 06:19:26] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 04:59 start_atlas.sh
[2026-01-15 06:19:26] drwxrwx--x 2 boincer umatlas      4096 Jan 15 04:59 shared
[2026-01-15 06:19:26] -rw-r--r-- 2 boincer umatlas    592416 Jan 15 04:59 input.tar.gz
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas         0 Jan 15 04:59 boinc_lockfile
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas      2508 Jan 15 04:59 pandaJob.out
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas        57 Jan 15 04:59 setup.sh.local
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas   1007757 Jan 15 05:00 agis_schedconf.cvmfs.json
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas   1516246 Jan 15 05:00 agis_ddmendpoints.agis.ALL.json
[2026-01-15 06:19:26] drwx------ 5 boincer umatlas      4096 Jan 15 05:00 pilot3
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas      5910 Jan 15 06:12 init_data.xml
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas 145513734 Jan 15 06:17 HITS.48215263._048423.pool.root.1
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas       530 Jan 15 06:18 boinc_task_state.xml
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas      1046 Jan 15 06:18 memory_monitor_summary.json
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas    333868 Jan 15 06:18 log.48215263._048423.job.log.tgz.1
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas      7833 Jan 15 06:18 heartbeat.json
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas        95 Jan 15 06:18 pilot_heartbeat.json
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 06:19 boinc_mmap_file
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas        27 Jan 15 06:19 wrapper_checkpoint.txt
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas      4746 Jan 15 06:19 pilotlog.txt
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas    677509 Jan 15 06:19 log.48215263._048423.job.log.1
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas       357 Jan 15 06:19 output.list
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas       620 Jan 15 06:19 runtime_log
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas   1034240 Jan 15 06:19 result.tar.gz
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas       658 Jan 15 06:19 sjONDm6PW08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxDoKDmyQw6om.diag
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas      9342 Jan 15 06:19 runtime_log.err
[2026-01-15 06:19:26] -rw-r--r-- 1 boincer umatlas     22693 Jan 15 06:19 stderr.txt
[2026-01-15 06:19:26] HITS file was successfully produced:
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas 145513734 Jan 15 06:17 shared/HITS.pool.root.1
[2026-01-15 06:19:26]  *** Contents of shared directory: ***
[2026-01-15 06:19:26] total 724396
[2026-01-15 06:19:26] -rw-r--r-- 2 boincer umatlas 594612323 Jan 15 04:59 ATLAS.root_0
[2026-01-15 06:19:26] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 04:59 start_atlas.sh
[2026-01-15 06:19:26] -rw-r--r-- 2 boincer umatlas    592416 Jan 15 04:59 input.tar.gz
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas 145513734 Jan 15 06:17 HITS.pool.root.1
[2026-01-15 06:19:26] -rw------- 1 boincer umatlas   1034240 Jan 15 06:19 result.tar.gz
06:19:27 (16074): run_atlas exited; CPU time 33552.502862
06:19:27 (16074): called boinc_finish(0)

</stderr_txt>
]]>

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