Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:11:39 (1658090): wrapper (7.7.26015): starting
16:11:39 (1658090): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 16:11:39] Arguments: --nthreads 12
[2026-01-16 16:11:39] Threads: 12
[2026-01-16 16:11:39] Checking for CVMFS
[2026-01-16 16:11:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 16:11:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 16:11:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 16:11:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 16:11:40] 2.13.3.0 40677 10699 68044 155212 1 240 4050708 4096001 19263 130560 0 88470551 99.982 1160278 229 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 16:11:40] CVMFS is ok
[2026-01-16 16:11:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 16:11:40] Checking for apptainer binary...
[2026-01-16 16:11:40] apptainer is not installed, using version from CVMFS
[2026-01-16 16:11:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 16:11:42] epyc7v12
[2026-01-16 16:11:42] apptainer works
[2026-01-16 16:11:42] Set ATHENA_PROC_NUMBER=12
[2026-01-16 16:11:42] Set ATHENA_CORE_NUMBER=12
[2026-01-16 16:11:42] Starting ATLAS job with PandaID=6970396510
[2026-01-16 16:11:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 17:42:31]  *** The last 200 lines of the pilot log: ***
[2026-01-16 17:42:31] 2026-01-16 17:41:36,582 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31427/slots/1/PanDA_Pilot-6970396510/log.48215263._048210.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-16 17:42:31] 2026-01-16 17:41:36,630 | INFO     | adding to output.list: log.48215263._048210.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/d6/log.48215263._048210.job.log.tg
[2026-01-16 17:42:31] 2026-01-16 17:41:36,633 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-16 17:42:31] 2026-01-16 17:41:36,633 | INFO     | summary of transferred files:
[2026-01-16 17:42:31] 2026-01-16 17:41:36,633 | INFO     |  -- lfn=log.48215263._048210.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 17:42:31] 2026-01-16 17:41:36,633 | INFO     | stage-out finished correctly
[2026-01-16 17:42:31] 2026-01-16 17:41:37,178 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 17:42:31] 2026-01-16 17:41:37,806 | INFO     | time since job start (5363s) is within the limit (349056.0s)
[2026-01-16 17:42:31] 2026-01-16 17:41:38,702 | INFO     | job 6970396510 has state=finished
[2026-01-16 17:42:31] 2026-01-16 17:41:38,702 | INFO     | preparing for final server update for job 6970396510 in state='finished'
[2026-01-16 17:42:31] 2026-01-16 17:41:38,703 | INFO     | this job has now completed (state=finished)
[2026-01-16 17:42:31] 2026-01-16 17:41:38,703 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 17:42:31] 2026-01-16 17:41:38,703 | INFO     | log transfer has been attempted: DONE
[2026-01-16 17:42:31] 2026-01-16 17:41:38,703 | INFO     | job 6970396510 has finished - writing final server update
[2026-01-16 17:42:31] 2026-01-16 17:41:38,704 | INFO     | total number of processed events: 400 (read)
[2026-01-16 17:42:31] 2026-01-16 17:41:38,704 | INFO     | executing command: lscpu
[2026-01-16 17:42:31] 2026-01-16 17:41:38,875 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 17:42:31] 2026-01-16 17:41:40,197 | INFO     | PID=1662316 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 17:42:31] 2026-01-16 17:41:40,197 | INFO     | .. there are 22 such processes running
[2026-01-16 17:42:31] 2026-01-16 17:41:41,199 | INFO     | time since job start (5367s) is within the limit (349056.0s)
[2026-01-16 17:42:31] 2026-01-16 17:41:42,044 | WARNING  | process 1669617 can no longer be monitored (due to stat problems) - aborting
[2026-01-16 17:42:31] 2026-01-16 17:41:42,045 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/1/PanDA_Pilot-6970396510/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 17:42:31] 2026-01-16 17:41:43,204 | INFO     | time since job start (5369s) is within the limit (349056.0s)
[2026-01-16 17:42:31] 2026-01-16 17:41:43,233 | INFO     | number of running child processes to parent process 1669617: 1
[2026-01-16 17:42:31] 2026-01-16 17:41:43,236 | INFO     | maximum number of monitored processes: 6
[2026-01-16 17:42:31] 2026-01-16 17:41:45,212 | INFO     | time since job start (5371s) is within the limit (349056.0s)
[2026-01-16 17:42:31] 2026-01-16 17:41:45,739 | INFO     | monitor loop #353: job 0:6970396510 is in state 'finished'
[2026-01-16 17:42:31] 2026-01-16 17:41:45,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 17:42:31] 2026-01-16 17:41:47,217 | INFO     | time since job start (5373s) is within the limit (349056.0s)
[2026-01-16 17:42:31] 2026-01-16 17:41:48,243 | INFO     | monitor loop #354: job 0:6970396510 is in state 'finished'
[2026-01-16 17:42:31] 2026-01-16 17:41:48,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 17:42:31] 2026-01-16 17:41:49,222 | INFO     | time since job start (5375s) is within the limit (349056.0s)
[2026-01-16 17:42:31] 2026-01-16 17:41:50,749 | INFO     | monitor loop #355: job 0:6970396510 is in state 'finished'
[2026-01-16 17:42:31] 2026-01-16 17:41:50,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 17:42:31] 2026-01-16 17:41:51,228 | INFO     | time since job start (5377s) is within the limit (349056.0s)
[2026-01-16 17:42:31] 2026-01-16 17:41:51,816 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 17:42:31] 2026-01-16 17:41:51,886 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2398.1833984375003
[2026-01-16 17:42:31] 2026-01-16 17:41:51,940 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/1/PanDA_Pilot-6970396510/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 17:42:31] 2026-01-16 17:41:51,942 | INFO     | extracted standard info from prmon json
[2026-01-16 17:42:31] 2026-01-16 17:41:51,943 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 17:42:31] 2026-01-16 17:41:51,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 17:42:31] 2026-01-16 17:41:51,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 17:42:31] 2026-01-16 17:41:51,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 17:42:31] 2026-01-16 17:41:51,947 | INFO     | fitting pss+swap vs Time
[2026-01-16 17:42:31] 2026-01-16 17:41:51,947 | INFO     | sum of square deviations: 158737860.0
[2026-01-16 17:42:31] 2026-01-16 17:41:51,948 | INFO     | sum of deviations: 7118482596.0
[2026-01-16 17:42:31] 2026-01-16 17:41:51,950 | INFO     | mean x: 1768582717.5
[2026-01-16 17:42:31] 2026-01-16 17:41:51,950 | INFO     | mean y: 2662852.2
[2026-01-16 17:42:31] 2026-01-16 17:41:51,950 | INFO     | intersect: -79308128499.71904
[2026-01-16 17:42:31] 2026-01-16 17:41:51,951 | INFO     | chi2: 0.19154096393920214
[2026-01-16 17:42:31] 2026-01-16 17:41:51,951 | INFO     | current memory leak: 44.84 B/s (using 80 data points, chi2=0.19)
[2026-01-16 17:42:31] 2026-01-16 17:41:51,951 | INFO     | could have reported an average CPU frequency of 2397 MHz (6 samples)
[2026-01-16 17:42:31] 2026-01-16 17:41:51,951 | INFO     | ..............................
[2026-01-16 17:42:31] 2026-01-16 17:41:51,951 | INFO     | . Timing measurements:
[2026-01-16 17:42:31] 2026-01-16 17:41:51,951 | INFO     | . get job = 0 s
[2026-01-16 17:42:31] 2026-01-16 17:41:51,952 | INFO     | . initial setup = 3 s
[2026-01-16 17:42:31] 2026-01-16 17:41:51,952 | INFO     | . payload setup = 16 s
[2026-01-16 17:42:31] 2026-01-16 17:41:51,952 | INFO     | . stage-in = 0 s
[2026-01-16 17:42:31] 2026-01-16 17:41:51,952 | INFO     | . payload execution = 5302 s
[2026-01-16 17:42:31] 2026-01-16 17:41:51,952 | INFO     | . stage-out = 1 s
[2026-01-16 17:42:31] 2026-01-16 17:41:51,954 | INFO     | . log creation = 0 s
[2026-01-16 17:42:31] 2026-01-16 17:41:51,954 | INFO     | ..............................
[2026-01-16 17:42:31] 2026-01-16 17:41:52,191 | INFO     | 
[2026-01-16 17:42:31] 2026-01-16 17:41:52,192 | INFO     | job summary report
[2026-01-16 17:42:31] 2026-01-16 17:41:52,192 | INFO     | --------------------------------------------------
[2026-01-16 17:42:31] 2026-01-16 17:41:52,192 | INFO     | PanDA job id: 6970396510
[2026-01-16 17:42:31] 2026-01-16 17:41:52,192 | INFO     | task id: 48215263
[2026-01-16 17:42:31] 2026-01-16 17:41:52,192 | INFO     | errors: (none)
[2026-01-16 17:42:31] 2026-01-16 17:41:52,192 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 17:42:31] 2026-01-16 17:41:52,192 | INFO     | pilot state: finished 
[2026-01-16 17:42:31] 2026-01-16 17:41:52,192 | INFO     | transexitcode: 0
[2026-01-16 17:42:31] 2026-01-16 17:41:52,192 | INFO     | exeerrorcode: 0
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | exeerrordiag: 
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | exitcode: 0
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | exitmsg: OK
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | cpuconsumptiontime: 29280 s
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | nevents: 400
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | neventsw: 0
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | pid: 1669617
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | pgrp: 1669617
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | corecount: 12
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | event service: False
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | sizes: {0: 2283123, 1: 2283831, 2: 2284030, 13: 2284030, 15: 2284348, 24: 2284376, 5324: 2311211, 5325: 2320255, 5326: 2320311, 5341: 2320505}
[2026-01-16 17:42:31] 2026-01-16 17:41:52,193 | INFO     | --------------------------------------------------
[2026-01-16 17:42:31] 2026-01-16 17:41:52,194 | INFO     | 
[2026-01-16 17:42:31] 2026-01-16 17:41:52,194 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/1
[2026-01-16 17:42:31] 2026-01-16 17:41:52,264 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,265 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,265 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,265 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,266 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 17:42:31] 2026-01-16 17:41:52,267 | INFO     | job 6970396510 has completed (purged errors)
[2026-01-16 17:42:31] 2026-01-16 17:41:52,267 | INFO     | overall cleanup function is called
[2026-01-16 17:42:31] 2026-01-16 17:41:53,284 | INFO     | --- collectZombieJob: --- 10, [1669617]
[2026-01-16 17:42:31] 2026-01-16 17:41:53,284 | INFO     | zombie collector waiting for pid 1669617
[2026-01-16 17:42:31] 2026-01-16 17:41:53,284 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 17:42:31] 2026-01-16 17:41:53,285 | INFO     | collected zombie processes
[2026-01-16 17:42:31] 2026-01-16 17:41:53,285 | INFO     | will attempt to kill all subprocesses of pid=1669617
[2026-01-16 17:42:31] 2026-01-16 17:41:54,446 | INFO     | process IDs to be killed: [1669617] (in reverse order)
[2026-01-16 17:42:31] 2026-01-16 17:41:54,993 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 17:42:31] 2026-01-16 17:41:54,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 17:42:31] 2026-01-16 17:41:55,038 | INFO     | did not find any defunct processes belonging to 1669617
[2026-01-16 17:42:31] 2026-01-16 17:41:55,085 | INFO     | did not find any defunct processes belonging to 1669617
[2026-01-16 17:42:31] 2026-01-16 17:41:55,086 | INFO     | ready for new job
[2026-01-16 17:42:31] 2026-01-16 17:41:55,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 17:42:31] 2026-01-16 17:41:55,088 | INFO     | ***************************************
[2026-01-16 17:42:31] 2026-01-16 17:41:55,091 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 17:42:31] 2026-01-16 17:41:55,091 | INFO     | ***************************************
[2026-01-16 17:42:31] 2026-01-16 17:41:55,091 | INFO     | 
[2026-01-16 17:42:31] 2026-01-16 17:41:55,107 | INFO     | architecture information:
[2026-01-16 17:42:31] 2026-01-16 17:41:55,109 | INFO     | executing command: cat /etc/os-release
[2026-01-16 17:42:31] 2026-01-16 17:41:55,151 | INFO     | cat /etc/os-release:
[2026-01-16 17:42:31] NAME="CentOS Linux"
[2026-01-16 17:42:31] VERSION="7 (Core)"
[2026-01-16 17:42:31] ID="centos"
[2026-01-16 17:42:31] ID_LIKE="rhel fedora"
[2026-01-16 17:42:31] VERSION_ID="7"
[2026-01-16 17:42:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 17:42:31] ANSI_COLOR="0;31"
[2026-01-16 17:42:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 17:42:31] HOME_URL="https://www.centos.org/"
[2026-01-16 17:42:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 17:42:31] 
[2026-01-16 17:42:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 17:42:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 17:42:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 17:42:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 17:42:31] 
[2026-01-16 17:42:31] 2026-01-16 17:41:55,152 | INFO     | ***************************************
[2026-01-16 17:42:31] 2026-01-16 17:41:55,654 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/1
[2026-01-16 17:42:31] 2026-01-16 17:41:55,710 | INFO     | sufficient remaining disk space (321265860608 B)
[2026-01-16 17:42:31] 2026-01-16 17:41:55,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 17:42:31] 2026-01-16 17:41:55,710 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 17:42:31] 2026-01-16 17:41:55,710 | INFO     | update_server=False
[2026-01-16 17:42:31] 2026-01-16 17:41:55,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 17:42:31] 2026-01-16 17:41:55,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 17:42:31] 2026-01-16 17:41:55,762 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-16 17:42:31] 2026-01-16 17:41:55,762 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-16 17:42:31] 2026-01-16 17:41:55,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 17:42:31] 2026-01-16 17:41:55,763 | INFO     | will abort loop
[2026-01-16 17:42:31] 2026-01-16 17:41:55,938 | INFO     | all payload control threads have been joined
[2026-01-16 17:42:31] 2026-01-16 17:41:56,716 | INFO     | [data] copytool_in thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:56,719 | INFO     | [job] retrieve thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:56,767 | INFO     | [job] job monitor thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:56,781 | INFO     | all data control threads have been joined
[2026-01-16 17:42:31] 2026-01-16 17:41:56,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 17:42:31] 2026-01-16 17:41:56,943 | INFO     | [payload] control thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:57,069 | INFO     | [payload] validate_post thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:57,126 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:57,202 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 17:42:31] 2026-01-16 17:41:57,377 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:57,414 | INFO     | all job control threads have been joined
[2026-01-16 17:42:31] 2026-01-16 17:41:57,468 | INFO     | [job] validate thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:57,716 | INFO     | [data] copytool_out thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:57,778 | INFO     | [payload] failed_post thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:57,786 | INFO     | [data] control thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:57,934 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:58,150 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:58,208 | INFO     | [job] queue monitor thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:41:58,419 | INFO     | [job] control thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:42:00,915 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 17:42:31] 2026-01-16 17:42:09,035 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-01-16 17:42:31] 2026-01-16 17:42:23,095 | INFO     | [monitor] cgroup control has ended
[2026-01-16 17:42:31] 2026-01-16 17:42:25,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138106913216320)>', '<ExcThread(monitor, started 138106502092544)>']
[2026-01-16 17:42:31] 2026-01-16 17:42:25,891 | INFO     | PID=1662316 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 17:42:31] 2026-01-16 17:42:25,892 | INFO     | .. there are 22 such processes running
[2026-01-16 17:42:31] 2026-01-16 17:42:25,893 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 17:42:31] 2026-01-16 17:42:25,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 17:42:31] 2026-01-16 17:42:25,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 17:42:31] 2026-01-16 17:42:25,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 17:42:31] 2026-01-16 17:42:25,893 | INFO     | [monitor] control thread has ended
[2026-01-16 17:42:31] 2026-01-16 17:42:30,106 | INFO     | all workflow threads have been joined
[2026-01-16 17:42:31] 2026-01-16 17:42:30,106 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 17:42:31] 2026-01-16 17:42:30,107 | INFO     | traces error code: 0
[2026-01-16 17:42:31] 2026-01-16 17:42:30,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 17:42:31] 2026-01-16 17:42:30,626 [wrapper] ==== pilot stdout END ====
[2026-01-16 17:42:31] 2026-01-16 17:42:30,637 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 17:42:31] 2026-01-16 17:42:30,645 [wrapper] pilotpid: 1662316
[2026-01-16 17:42:31] 2026-01-16 17:42:30,651 [wrapper] Pilot exit status: 0
[2026-01-16 17:42:31] 2026-01-16 17:42:30,687 [wrapper] pandaids: 6970396510
[2026-01-16 17:42:31] 2026-01-16 17:42:30,856 [wrapper] cleanup supervisor_pilot 2179029 1662317
[2026-01-16 17:42:31] 2026-01-16 17:42:30,868 [wrapper] Test setup, not cleaning
[2026-01-16 17:42:31] 2026-01-16 17:42:30,882 [wrapper] apfmon messages muted
[2026-01-16 17:42:31] 2026-01-16 17:42:30,894 [wrapper] ==== wrapper stdout END ====
[2026-01-16 17:42:31] 2026-01-16 17:42:30,912 [wrapper] ==== wrapper stderr END ====
[2026-01-16 17:42:31]  *** Error codes and diagnostics ***
[2026-01-16 17:42:31]     "exeErrorCode": 0,
[2026-01-16 17:42:31]     "exeErrorDiag": "",
[2026-01-16 17:42:31]     "pilotErrorCode": 0,
[2026-01-16 17:42:31]     "pilotErrorDiag": "",
[2026-01-16 17:42:31]  *** Listing of results directory ***
[2026-01-16 17:42:31] total 732116
[2026-01-16 17:42:31] -rw-r--r-- 1 boinc boinc    579449 Jan 15 06:52 pilot3.tar.gz
[2026-01-16 17:42:31] -rwx------ 1 boinc boinc     36322 Jan 15 06:53 runpilot2-wrapper.sh
[2026-01-16 17:42:31] -rw-r--r-- 1 boinc boinc      5112 Jan 15 06:55 queuedata.json
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc       100 Jan 16 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 17:42:31] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 16:11 run_atlas
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc       105 Jan 16 16:11 job.xml
[2026-01-16 17:42:31] -rw-r--r-- 2 boinc boinc 595132398 Jan 16 16:11 EVNT.32794306._001871.pool.root.1
[2026-01-16 17:42:31] -rw-r--r-- 2 boinc boinc     15847 Jan 16 16:11 start_atlas.sh
[2026-01-16 17:42:31] drwxrwx--x 2 boinc boinc      4096 Jan 16 16:11 shared
[2026-01-16 17:42:31] -rw-r--r-- 2 boinc boinc    592405 Jan 16 16:11 input.tar.gz
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc         0 Jan 16 16:11 boinc_setup_complete
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 16:11 init_data.xml
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc         0 Jan 16 16:11 boinc_lockfile
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc      2508 Jan 16 16:11 pandaJob.out
[2026-01-16 17:42:31] -rw------- 1 boinc boinc   1004099 Jan 16 16:12 agis_schedconf.cvmfs.json
[2026-01-16 17:42:31] -rw------- 1 boinc boinc   1516246 Jan 16 16:12 agis_ddmendpoints.agis.ALL.json
[2026-01-16 17:42:31] drwx------ 5 boinc boinc      4096 Jan 16 16:12 pilot3
[2026-01-16 17:42:31] -rw------- 1 boinc boinc 148307099 Jan 16 17:40 HITS.48215263._048210.pool.root.1
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc       530 Jan 16 17:40 boinc_task_state.xml
[2026-01-16 17:42:31] -rw------- 1 boinc boinc      1022 Jan 16 17:41 memory_monitor_summary.json
[2026-01-16 17:42:31] -rw------- 1 boinc boinc    409206 Jan 16 17:41 log.48215263._048210.job.log.tgz.1
[2026-01-16 17:42:31] -rw------- 1 boinc boinc      7728 Jan 16 17:41 heartbeat.json
[2026-01-16 17:42:31] -rw------- 1 boinc boinc        95 Jan 16 17:42 pilot_heartbeat.json
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 17:42 boinc_mmap_file
[2026-01-16 17:42:31] -rw------- 1 boinc boinc      5034 Jan 16 17:42 pilotlog.txt
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc        27 Jan 16 17:42 wrapper_checkpoint.txt
[2026-01-16 17:42:31] -rw------- 1 boinc boinc    750647 Jan 16 17:42 log.48215263._048210.job.log.1
[2026-01-16 17:42:31] -rw------- 1 boinc boinc       357 Jan 16 17:42 output.list
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc       620 Jan 16 17:42 runtime_log
[2026-01-16 17:42:31] -rw------- 1 boinc boinc   1177600 Jan 16 17:42 result.tar.gz
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 17:42 runtime_log.err
[2026-01-16 17:42:31] -rw------- 1 boinc boinc       651 Jan 16 17:42 CITNDmvPW08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoDoKDmxEPnQn.diag
[2026-01-16 17:42:31] -rw-rw-r-- 1 boinc boinc     22327 Jan 16 17:42 stderr.txt
[2026-01-16 17:42:31] HITS file was successfully produced:
[2026-01-16 17:42:31] -rw------- 1 boinc boinc 148307099 Jan 16 17:40 shared/HITS.pool.root.1
[2026-01-16 17:42:31]  *** Contents of shared directory: ***
[2026-01-16 17:42:31] total 727772
[2026-01-16 17:42:31] -rw-r--r-- 2 boinc boinc 595132398 Jan 16 16:11 ATLAS.root_0
[2026-01-16 17:42:31] -rw-r--r-- 2 boinc boinc     15847 Jan 16 16:11 start_atlas.sh
[2026-01-16 17:42:31] -rw-r--r-- 2 boinc boinc    592405 Jan 16 16:11 input.tar.gz
[2026-01-16 17:42:31] -rw------- 1 boinc boinc 148307099 Jan 16 17:40 HITS.pool.root.1
[2026-01-16 17:42:31] -rw------- 1 boinc boinc   1177600 Jan 16 17:42 result.tar.gz
17:42:33 (1658090): run_atlas exited; CPU time 29580.056692
17:42:33 (1658090): called boinc_finish(0)

</stderr_txt>
]]>

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