Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:56:30 (751396): wrapper (7.7.26015): starting
04:56:30 (751396): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 04:56:30] Arguments: --nthreads 8
[2026-01-15 04:56:30] Threads: 8
[2026-01-15 04:56:30] Checking for CVMFS
[2026-01-15 04:56:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 04:56:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 04:56:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 04:56:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 04:56:31] 2.13.3.0 15397 101759 254380 155162 1 672 26995806 32935937 22601 16776704 0 731158900 99.543 861802343 36431 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 04:56:31] CVMFS is ok
[2026-01-15 04:56:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 04:56:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 04:56:31] Further information can be found at the LHC@home message board.
[2026-01-15 04:56:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 04:56:31] Checking for apptainer binary...
[2026-01-15 04:56:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 04:56:31] Running /usr/bin/apptainer --version
[2026-01-15 04:56:31] apptainer version 1.4.5-2.el9
[2026-01-15 04:56:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 04:56:31] c7-16-8.aglt2.org
[2026-01-15 04:56:31] apptainer works
[2026-01-15 04:56:31] Set ATHENA_PROC_NUMBER=8
[2026-01-15 04:56:31] Set ATHENA_CORE_NUMBER=8
[2026-01-15 04:56:31] Starting ATLAS job with PandaID=6970192521
[2026-01-15 04:56:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 07:12:15]  *** The last 200 lines of the pilot log: ***
[2026-01-15 07:12:15] 2026-01-15 12:11:05,145 | INFO     | intersect: -1616709318.2443287
[2026-01-15 07:12:15] 2026-01-15 12:11:05,145 | INFO     | chi2: 0.00033773061155717714
[2026-01-15 07:12:15] 2026-01-15 12:11:05,145 | INFO     | current chi2=0.00033773061155717714 (change=78.34989996610449 %)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,145 | INFO     | sum of square deviations: 483973452.9655173
[2026-01-15 07:12:15] 2026-01-15 12:11:05,146 | INFO     | sum of deviations: 205610493.31034476
[2026-01-15 07:12:15] 2026-01-15 12:11:05,146 | INFO     | mean x: 1768475475.5172415
[2026-01-15 07:12:15] 2026-01-15 12:11:05,146 | INFO     | mean y: 2550857.8448275863
[2026-01-15 07:12:15] 2026-01-15 12:11:05,146 | INFO     | intersect: -748765382.1272314
[2026-01-15 07:12:15] 2026-01-15 12:11:05,150 | INFO     | chi2: 0.0001859255189950867
[2026-01-15 07:12:15] 2026-01-15 12:11:05,150 | INFO     | current chi2=0.0001859255189950867 (change=44.94857361675375 %)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,150 | INFO     | sum of square deviations: 424046137.96396345
[2026-01-15 07:12:15] 2026-01-15 12:11:05,151 | INFO     | sum of deviations: -9951246.054054065
[2026-01-15 07:12:15] 2026-01-15 12:11:05,151 | INFO     | mean x: 1768475628.018018
[2026-01-15 07:12:15] 2026-01-15 12:11:05,151 | INFO     | mean y: 2551407.027027027
[2026-01-15 07:12:15] 2026-01-15 12:11:05,151 | INFO     | intersect: 44052872.40884511
[2026-01-15 07:12:15] 2026-01-15 12:11:05,151 | INFO     | chi2: 7.81858676313164e-05
[2026-01-15 07:12:15] 2026-01-15 12:11:05,151 | INFO     | current chi2=7.81858676313164e-05 (change=57.94774808003491 %)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,151 | INFO     | sum of square deviations: 369281710.4622636
[2026-01-15 07:12:15] 2026-01-15 12:11:05,152 | INFO     | sum of deviations: -25509491.9245283
[2026-01-15 07:12:15] 2026-01-15 12:11:05,152 | INFO     | mean x: 1768475780.518868
[2026-01-15 07:12:15] 2026-01-15 12:11:05,152 | INFO     | mean y: 2551443.962264151
[2026-01-15 07:12:15] 2026-01-15 12:11:05,152 | INFO     | intersect: 124715410.8302631
[2026-01-15 07:12:15] 2026-01-15 12:11:05,152 | INFO     | chi2: 4.373592238067862e-05
[2026-01-15 07:12:15] 2026-01-15 12:11:05,152 | INFO     | current chi2=4.373592238067862e-05 (change=44.06160127695414 %)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,152 | INFO     | sum of square deviations: 319447607.96039516
[2026-01-15 07:12:15] 2026-01-15 12:11:05,153 | INFO     | sum of deviations: 33240029.316831686
[2026-01-15 07:12:15] 2026-01-15 12:11:05,153 | INFO     | mean x: 1768475933.019802
[2026-01-15 07:12:15] 2026-01-15 12:11:05,153 | INFO     | mean y: 2551263.8415841586
[2026-01-15 07:12:15] 2026-01-15 12:11:05,153 | INFO     | intersect: -181466992.65754578
[2026-01-15 07:12:15] 2026-01-15 12:11:05,153 | INFO     | chi2: 3.278758946593029e-05
[2026-01-15 07:12:15] 2026-01-15 12:11:05,153 | INFO     | current chi2=3.278758946593029e-05 (change=25.032815861190155 %)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,153 | INFO     | sum of square deviations: 274311267.9583326
[2026-01-15 07:12:15] 2026-01-15 12:11:05,154 | INFO     | sum of deviations: 62202315.1875
[2026-01-15 07:12:15] 2026-01-15 12:11:05,154 | INFO     | mean x: 1768476085.5208333
[2026-01-15 07:12:15] 2026-01-15 12:11:05,154 | INFO     | mean y: 2551170.15625
[2026-01-15 07:12:15] 2026-01-15 12:11:05,154 | INFO     | intersect: -398465192.3572738
[2026-01-15 07:12:15] 2026-01-15 12:11:05,154 | INFO     | chi2: 2.1001718527718357e-05
[2026-01-15 07:12:15] 2026-01-15 12:11:05,158 | INFO     | current chi2=2.1001718527718357e-05 (change=35.94613428492106 %)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,158 | INFO     | sum of square deviations: 233646226.98901114
[2026-01-15 07:12:15] 2026-01-15 12:11:05,159 | INFO     | sum of deviations: 56607171.93406597
[2026-01-15 07:12:15] 2026-01-15 12:11:05,159 | INFO     | mean x: 1768476238.010989
[2026-01-15 07:12:15] 2026-01-15 12:11:05,159 | INFO     | mean y: 2551190.0659340657
[2026-01-15 07:12:15] 2026-01-15 12:11:05,159 | INFO     | intersect: -425910419.4215863
[2026-01-15 07:12:15] 2026-01-15 12:11:05,159 | INFO     | chi2: 2.0490770720214204e-05
[2026-01-15 07:12:15] 2026-01-15 12:11:05,159 | INFO     | current chi2=2.0490770720214204e-05 (change=2.432885703280887 %)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,159 | INFO     | left removable region: 80
[2026-01-15 07:12:15] 2026-01-15 12:11:05,159 | INFO     | sum of square deviations: 28244952.97777777
[2026-01-15 07:12:15] 2026-01-15 12:11:05,159 | INFO     | sum of deviations: -66718.68888889225
[2026-01-15 07:12:15] 2026-01-15 12:11:05,160 | INFO     | mean x: 1768477275.0222223
[2026-01-15 07:12:15] 2026-01-15 12:11:05,160 | INFO     | mean y: 2551200.688888889
[2026-01-15 07:12:15] 2026-01-15 12:11:05,160 | INFO     | intersect: 6728601.345640371
[2026-01-15 07:12:15] 2026-01-15 12:11:05,160 | INFO     | chi2: 3.009110358105505e-06
[2026-01-15 07:12:15] 2026-01-15 12:11:05,160 | INFO     | current memory leak: -0.00 B/s (using 45 data points, chi2=0.00)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,160 | INFO     | could have reported an average CPU frequency of 3078 MHz (8 samples)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,160 | INFO     | ..............................
[2026-01-15 07:12:15] 2026-01-15 12:11:05,160 | INFO     | . Timing measurements:
[2026-01-15 07:12:15] 2026-01-15 12:11:05,160 | INFO     | . get job = 0 s
[2026-01-15 07:12:15] 2026-01-15 12:11:05,161 | INFO     | . initial setup = 3 s
[2026-01-15 07:12:15] 2026-01-15 12:11:05,161 | INFO     | . payload setup = 8 s
[2026-01-15 07:12:15] 2026-01-15 12:11:05,161 | INFO     | . stage-in = 0 s
[2026-01-15 07:12:15] 2026-01-15 12:11:05,161 | INFO     | . payload execution = 7989 s
[2026-01-15 07:12:15] 2026-01-15 12:11:05,161 | INFO     | . stage-out = 3 s
[2026-01-15 07:12:15] 2026-01-15 12:11:05,161 | INFO     | . log creation = 0 s
[2026-01-15 07:12:15] 2026-01-15 12:11:05,161 | INFO     | ..............................
[2026-01-15 07:12:15] 2026-01-15 12:11:05,382 | INFO     | 
[2026-01-15 07:12:15] 2026-01-15 12:11:05,382 | INFO     | job summary report
[2026-01-15 07:12:15] 2026-01-15 12:11:05,382 | INFO     | --------------------------------------------------
[2026-01-15 07:12:15] 2026-01-15 12:11:05,382 | INFO     | PanDA job id: 6970192521
[2026-01-15 07:12:15] 2026-01-15 12:11:05,382 | INFO     | task id: 48215263
[2026-01-15 07:12:15] 2026-01-15 12:11:05,382 | INFO     | errors: (none)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,382 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 07:12:15] 2026-01-15 12:11:05,382 | INFO     | pilot state: finished 
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | transexitcode: 0
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | exeerrorcode: 0
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | exeerrordiag: 
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | exitcode: 0
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | exitmsg: OK
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | cpuconsumptiontime: 21117 s
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | nevents: 400
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | neventsw: 0
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | pid: 762814
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | pgrp: 762814
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | corecount: 8
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | event service: False
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | sizes: {0: 2283952, 11: 2284242, 8002: 2311842, 8003: 2311841, 8007: 2320895, 8008: 2320951, 8028: 2321273}
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | --------------------------------------------------
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | 
[2026-01-15 07:12:15] 2026-01-15 12:11:05,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-15 07:12:15] 2026-01-15 12:11:05,452 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,452 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,452 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,452 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,453 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,454 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 07:12:15] 2026-01-15 12:11:05,454 | INFO     | job 6970192521 has completed (purged errors)
[2026-01-15 07:12:15] 2026-01-15 12:11:05,454 | INFO     | overall cleanup function is called
[2026-01-15 07:12:15] 2026-01-15 12:11:06,480 | INFO     | --- collectZombieJob: --- 10, [762814]
[2026-01-15 07:12:15] 2026-01-15 12:11:06,481 | INFO     | zombie collector waiting for pid 762814
[2026-01-15 07:12:15] 2026-01-15 12:11:06,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 07:12:15] 2026-01-15 12:11:06,481 | INFO     | collected zombie processes
[2026-01-15 07:12:15] 2026-01-15 12:11:06,481 | INFO     | will attempt to kill all subprocesses of pid=762814
[2026-01-15 07:12:15] 2026-01-15 12:11:07,730 | INFO     | process IDs to be killed: [762814] (in reverse order)
[2026-01-15 07:12:15] 2026-01-15 12:11:08,082 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 07:12:15] 2026-01-15 12:11:08,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 07:12:15] 2026-01-15 12:11:08,144 | INFO     | did not find any defunct processes belonging to 762814
[2026-01-15 07:12:15] 2026-01-15 12:11:08,244 | INFO     | did not find any defunct processes belonging to 762814
[2026-01-15 07:12:15] 2026-01-15 12:11:08,245 | INFO     | ready for new job
[2026-01-15 07:12:15] 2026-01-15 12:11:08,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 07:12:15] 2026-01-15 12:11:08,246 | INFO     | ***************************************
[2026-01-15 07:12:15] 2026-01-15 12:11:08,246 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 07:12:15] 2026-01-15 12:11:08,246 | INFO     | ***************************************
[2026-01-15 07:12:15] 2026-01-15 12:11:08,246 | INFO     | 
[2026-01-15 07:12:15] 2026-01-15 12:11:08,255 | INFO     | architecture information:
[2026-01-15 07:12:15] 2026-01-15 12:11:08,259 | INFO     | executing command: cat /etc/os-release
[2026-01-15 07:12:15] 2026-01-15 12:11:08,292 | INFO     | cat /etc/os-release:
[2026-01-15 07:12:15] NAME="CentOS Linux"
[2026-01-15 07:12:15] VERSION="7 (Core)"
[2026-01-15 07:12:15] ID="centos"
[2026-01-15 07:12:15] ID_LIKE="rhel fedora"
[2026-01-15 07:12:15] VERSION_ID="7"
[2026-01-15 07:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 07:12:15] ANSI_COLOR="0;31"
[2026-01-15 07:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 07:12:15] HOME_URL="https://www.centos.org/"
[2026-01-15 07:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 07:12:15] 
[2026-01-15 07:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 07:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 07:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 07:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 07:12:15] 
[2026-01-15 07:12:15] 2026-01-15 12:11:08,292 | INFO     | ***************************************
[2026-01-15 07:12:15] 2026-01-15 12:11:08,797 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-15 07:12:15] 2026-01-15 12:11:08,896 | INFO     | sufficient remaining disk space (70123520000 B)
[2026-01-15 07:12:15] 2026-01-15 12:11:08,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 07:12:15] 2026-01-15 12:11:08,897 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 07:12:15] 2026-01-15 12:11:08,897 | INFO     | update_server=False
[2026-01-15 07:12:15] 2026-01-15 12:11:08,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 07:12:15] 2026-01-15 12:11:09,309 | INFO     | all data control threads have been joined
[2026-01-15 07:12:15] 2026-01-15 12:11:09,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 07:12:15] 2026-01-15 12:11:09,611 | INFO     | all payload control threads have been joined
[2026-01-15 07:12:15] 2026-01-15 12:11:09,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 07:12:15] 2026-01-15 12:11:09,633 | INFO     | aborting loop
[2026-01-15 07:12:15] 2026-01-15 12:11:09,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 07:12:15] 2026-01-15 12:11:09,905 | INFO     | [job] validate thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:09,906 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:09,916 | INFO     | [job] retrieve thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:09,924 | INFO     | all job control threads have been joined
[2026-01-15 07:12:15] 2026-01-15 12:11:10,041 | INFO     | [payload] validate_post thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:10,221 | INFO     | [data] copytool_in thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:10,316 | INFO     | [data] control thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:10,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 07:12:15] 2026-01-15 12:11:10,618 | INFO     | [payload] control thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:10,627 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:10,653 | INFO     | [job] job monitor thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:10,941 | INFO     | [job] control thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:11,024 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:11,183 | INFO     | [payload] failed_post thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:11,359 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:11,402 | INFO     | [job] queue monitor thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:11,771 | INFO     | [data] copytool_out thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:13,580 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 07:12:15] 2026-01-15 12:11:39,920 | INFO     | PID=755742 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 07:12:15] 2026-01-15 12:11:39,920 | INFO     | .. there are 24 such processes running
[2026-01-15 07:12:15] 2026-01-15 12:11:39,920 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 07:12:15] 2026-01-15 12:11:39,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 07:12:15] 2026-01-15 12:11:39,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 07:12:15] 2026-01-15 12:11:52,481 [wrapper] supervise_pilot (15 min periods counter: 10)
[2026-01-15 07:12:15] 2026-01-15 12:12:08,940 | INFO     | [monitor] cgroup control has ended
[2026-01-15 07:12:15] 2026-01-15 12:12:09,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043133781824)>', '<ExcThread(monitor, started 140042492172032)>']
[2026-01-15 07:12:15] 2026-01-15 12:12:10,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 07:12:15] 2026-01-15 12:12:10,146 | INFO     | [monitor] control thread has ended
[2026-01-15 07:12:15] 2026-01-15 12:12:14,497 | INFO     | all workflow threads have been joined
[2026-01-15 07:12:15] 2026-01-15 12:12:14,497 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 07:12:15] 2026-01-15 12:12:14,498 | INFO     | traces error code: 0
[2026-01-15 07:12:15] 2026-01-15 12:12:14,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 07:12:15] 2026-01-15 12:12:14,732 [wrapper] ==== pilot stdout END ====
[2026-01-15 07:12:15] 2026-01-15 12:12:14,738 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 07:12:15] 2026-01-15 12:12:14,747 [wrapper] pilotpid: 755742
[2026-01-15 07:12:15] 2026-01-15 12:12:14,754 [wrapper] Pilot exit status: 0
[2026-01-15 07:12:15] 2026-01-15 12:12:14,811 [wrapper] pandaids: 6970192521
[2026-01-15 07:12:15] 2026-01-15 12:12:14,980 [wrapper] cleanup supervisor_pilot 1440732 755743
[2026-01-15 07:12:15] 2026-01-15 12:12:15,006 [wrapper] Test setup, not cleaning
[2026-01-15 07:12:15] 2026-01-15 12:12:15,011 [wrapper] apfmon messages muted
[2026-01-15 07:12:15] 2026-01-15 12:12:15,015 [wrapper] ==== wrapper stdout END ====
[2026-01-15 07:12:15] 2026-01-15 12:12:15,033 [wrapper] ==== wrapper stderr END ====
[2026-01-15 07:12:15]  *** Error codes and diagnostics ***
[2026-01-15 07:12:15]     "exeErrorCode": 0,
[2026-01-15 07:12:15]     "exeErrorDiag": "",
[2026-01-15 07:12:15]     "pilotErrorCode": 0,
[2026-01-15 07:12:15]     "pilotErrorDiag": "",
[2026-01-15 07:12:15]  *** Listing of results directory ***
[2026-01-15 07:12:15] total 736288
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 22:00 queuedata.json
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 22:00 pilot3.tar.gz
[2026-01-15 07:12:15] -rwx------. 1 boincer umatlas     36322 Jan 14 22:02 runpilot2-wrapper.sh
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas       100 Jan 15 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 07:12:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 04:56 run_atlas
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas       105 Jan 15 04:56 job.xml
[2026-01-15 07:12:15] -rw-r--r--. 2 boincer umatlas 594674852 Jan 15 04:56 EVNT.32794306._001711.pool.root.1
[2026-01-15 07:12:15] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 04:56 start_atlas.sh
[2026-01-15 07:12:15] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 04:56 shared
[2026-01-15 07:12:15] -rw-r--r--. 2 boincer umatlas    592399 Jan 15 04:56 input.tar.gz
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas         0 Jan 15 04:56 boinc_lockfile
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 04:56 pandaJob.out
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas        57 Jan 15 04:56 setup.sh.local
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas   1007757 Jan 15 04:56 agis_schedconf.cvmfs.json
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas   1516246 Jan 15 04:56 agis_ddmendpoints.agis.ALL.json
[2026-01-15 07:12:15] drwx------. 5 boincer umatlas      4096 Jan 15 04:56 pilot3
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas      6944 Jan 15 07:02 init_data.xml
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas 152495030 Jan 15 07:09 HITS.48215263._042962.pool.root.1
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas       530 Jan 15 07:10 boinc_task_state.xml
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas      1044 Jan 15 07:10 memory_monitor_summary.json
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas    380603 Jan 15 07:10 log.48215263._042962.job.log.tgz.1
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas        95 Jan 15 07:10 pilot_heartbeat.json
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas      7789 Jan 15 07:11 heartbeat.json
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 07:12 boinc_mmap_file
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas        27 Jan 15 07:12 wrapper_checkpoint.txt
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas      4823 Jan 15 07:12 pilotlog.txt
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas   1044383 Jan 15 07:12 log.48215263._042962.job.log.1
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas       357 Jan 15 07:12 output.list
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas       620 Jan 15 07:12 runtime_log
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas   1443840 Jan 15 07:12 result.tar.gz
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 07:12 runtime_log.err
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas       656 Jan 15 07:12 d3AODmmnS08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8ZnKDm5lgAhm.diag
[2026-01-15 07:12:15] -rw-r--r--. 1 boincer umatlas     21057 Jan 15 07:12 stderr.txt
[2026-01-15 07:12:15] HITS file was successfully produced:
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas 152495030 Jan 15 07:09 shared/HITS.pool.root.1
[2026-01-15 07:12:15]  *** Contents of shared directory: ***
[2026-01-15 07:12:15] total 731680
[2026-01-15 07:12:15] -rw-r--r--. 2 boincer umatlas 594674852 Jan 15 04:56 ATLAS.root_0
[2026-01-15 07:12:15] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 04:56 start_atlas.sh
[2026-01-15 07:12:15] -rw-r--r--. 2 boincer umatlas    592399 Jan 15 04:56 input.tar.gz
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas 152495030 Jan 15 07:09 HITS.pool.root.1
[2026-01-15 07:12:15] -rw-------. 1 boincer umatlas   1443840 Jan 15 07:12 result.tar.gz
07:12:38 (751396): run_atlas exited; CPU time 21403.656265
07:12:38 (751396): called boinc_finish(0)

</stderr_txt>
]]>

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