Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:27:50 (630441): wrapper (7.7.26015): starting
04:27:50 (630441): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 04:27:50] Arguments: --nthreads 8
[2026-01-15 04:27:50] Threads: 8
[2026-01-15 04:27:50] Checking for CVMFS
[2026-01-15 04:27:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 04:27:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 04:27:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 04:27:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 04:27:50] 2.13.3.0 15397 101730 253952 155162 2 644 26270876 32935937 22574 16776704 0 731015862 99.543 861564355 36430 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 04:27:50] CVMFS is ok
[2026-01-15 04:27:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 04:27:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 04:27:50] Further information can be found at the LHC@home message board.
[2026-01-15 04:27:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 04:27:50] Checking for apptainer binary...
[2026-01-15 04:27:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 04:27:50] Running /usr/bin/apptainer --version
[2026-01-15 04:27:50] apptainer version 1.4.5-2.el9
[2026-01-15 04:27:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 04:28:11] c7-16-8.aglt2.org
[2026-01-15 04:28:11] apptainer works
[2026-01-15 04:28:11] Set ATHENA_PROC_NUMBER=8
[2026-01-15 04:28:11] Set ATHENA_CORE_NUMBER=8
[2026-01-15 04:28:11] Starting ATLAS job with PandaID=6970064313
[2026-01-15 04:28:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 05:27:52]  *** The last 200 lines of the pilot log: ***
[2026-01-15 05:27:52]  status_code=0
[2026-01-15 05:27:52]  storage_token=
[2026-01-15 05:27:52]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6970064313/log.48215263._040383.job.log.tgz.1
[2026-01-15 05:27:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/fc/log.48215263._040383.job.log.tgz.1
[2026-01-15 05:27:52]  workdir=None
[2026-01-15 05:27:52] ]
[2026-01-15 05:27:52] 2026-01-15 10:27:08,908 | INFO     | transferring file log.48215263._040383.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6970064313/log.48215263._040383.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 05:27:52] 2026-01-15 10:27:08,909 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6970064313/log.48215263._040383.job.log.tgz.1 /tmp/boinchome/slots/1/log.48215263._040383.job
[2026-01-15 05:27:52] 2026-01-15 10:27:08,986 | INFO     | adding to output.list: log.48215263._040383.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/fc/log.48215263._040383.job.log.tg
[2026-01-15 05:27:52] 2026-01-15 10:27:08,987 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 05:27:52] 2026-01-15 10:27:08,987 | INFO     | summary of transferred files:
[2026-01-15 05:27:52] 2026-01-15 10:27:08,988 | INFO     |  -- lfn=log.48215263._040383.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 05:27:52] 2026-01-15 10:27:08,988 | INFO     | stage-out finished correctly
[2026-01-15 05:27:52] 2026-01-15 10:27:09,277 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 05:27:52] 2026-01-15 10:27:09,692 | INFO     | time since job start (3522s) is within the limit (349056.0s)
[2026-01-15 05:27:52] 2026-01-15 10:27:09,693 | INFO     | job 6970064313 has state=finished
[2026-01-15 05:27:52] 2026-01-15 10:27:09,694 | INFO     | preparing for final server update for job 6970064313 in state='finished'
[2026-01-15 05:27:52] 2026-01-15 10:27:09,811 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 05:27:52] 2026-01-15 10:27:09,812 | INFO     | this job has now completed (state=finished)
[2026-01-15 05:27:52] 2026-01-15 10:27:09,812 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 05:27:52] 2026-01-15 10:27:09,812 | INFO     | log transfer has been attempted: DONE
[2026-01-15 05:27:52] 2026-01-15 10:27:09,812 | INFO     | job 6970064313 has finished - writing final server update
[2026-01-15 05:27:52] 2026-01-15 10:27:09,812 | INFO     | total number of processed events: 400 (read)
[2026-01-15 05:27:52] 2026-01-15 10:27:09,813 | INFO     | executing command: lscpu
[2026-01-15 05:27:52] 2026-01-15 10:27:09,911 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 05:27:52] 2026-01-15 10:27:11,260 | INFO     | monitor loop #243: job 0:6970064313 is in state 'finished'
[2026-01-15 05:27:52] 2026-01-15 10:27:11,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 05:27:52] 2026-01-15 10:27:11,699 | INFO     | time since job start (3524s) is within the limit (349056.0s)
[2026-01-15 05:27:52] 2026-01-15 10:27:13,706 | INFO     | time since job start (3526s) is within the limit (349056.0s)
[2026-01-15 05:27:52] 2026-01-15 10:27:13,765 | INFO     | monitor loop #244: job 0:6970064313 is in state 'finished'
[2026-01-15 05:27:52] 2026-01-15 10:27:13,765 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 05:27:52] 2026-01-15 10:27:15,713 | INFO     | time since job start (3528s) is within the limit (349056.0s)
[2026-01-15 05:27:52] 2026-01-15 10:27:16,270 | INFO     | monitor loop #245: job 0:6970064313 is in state 'finished'
[2026-01-15 05:27:52] 2026-01-15 10:27:16,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 05:27:52] 2026-01-15 10:27:17,530 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 05:27:52] 2026-01-15 10:27:17,535 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3063.82425
[2026-01-15 05:27:52] 2026-01-15 10:27:17,550 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970064313/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 05:27:52] 2026-01-15 10:27:17,553 | INFO     | extracted standard info from prmon json
[2026-01-15 05:27:52] 2026-01-15 10:27:17,553 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 05:27:52] 2026-01-15 10:27:17,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 05:27:52] 2026-01-15 10:27:17,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 05:27:52] 2026-01-15 10:27:17,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 05:27:52] 2026-01-15 10:27:17,571 | INFO     | fitting pss+swap vs Time
[2026-01-15 05:27:52] 2026-01-15 10:27:17,571 | INFO     | sum of square deviations: 41120468.823529385
[2026-01-15 05:27:52] 2026-01-15 10:27:17,571 | INFO     | sum of deviations: -2863569048.823529
[2026-01-15 05:27:52] 2026-01-15 10:27:17,571 | INFO     | mean x: 1768471172.0588236
[2026-01-15 05:27:52] 2026-01-15 10:27:17,571 | INFO     | mean y: 2631302.6078431373
[2026-01-15 05:27:52] 2026-01-15 10:27:17,572 | INFO     | intersect: 123156366095.30518
[2026-01-15 05:27:52] 2026-01-15 10:27:17,572 | INFO     | chi2: 0.008384462082561824
[2026-01-15 05:27:52] 2026-01-15 10:27:17,572 | INFO     | current memory leak: -69.64 B/s (using 51 data points, chi2=0.01)
[2026-01-15 05:27:52] 2026-01-15 10:27:17,572 | INFO     | could have reported an average CPU frequency of 3071 MHz (5 samples)
[2026-01-15 05:27:52] 2026-01-15 10:27:17,572 | INFO     | ..............................
[2026-01-15 05:27:52] 2026-01-15 10:27:17,572 | INFO     | . Timing measurements:
[2026-01-15 05:27:52] 2026-01-15 10:27:17,572 | INFO     | . get job = 0 s
[2026-01-15 05:27:52] 2026-01-15 10:27:17,572 | INFO     | . initial setup = 2 s
[2026-01-15 05:27:52] 2026-01-15 10:27:17,572 | INFO     | . payload setup = 10 s
[2026-01-15 05:27:52] 2026-01-15 10:27:17,573 | INFO     | . stage-in = 0 s
[2026-01-15 05:27:52] 2026-01-15 10:27:17,573 | INFO     | . payload execution = 3489 s
[2026-01-15 05:27:52] 2026-01-15 10:27:17,573 | INFO     | . stage-out = 1 s
[2026-01-15 05:27:52] 2026-01-15 10:27:17,573 | INFO     | . log creation = 0 s
[2026-01-15 05:27:52] 2026-01-15 10:27:17,573 | INFO     | ..............................
[2026-01-15 05:27:52] 2026-01-15 10:27:17,726 | INFO     | time since job start (3530s) is within the limit (349056.0s)
[2026-01-15 05:27:52] 2026-01-15 10:27:18,251 | INFO     | 
[2026-01-15 05:27:52] 2026-01-15 10:27:18,251 | INFO     | job summary report
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | --------------------------------------------------
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | PanDA job id: 6970064313
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | task id: 48215263
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | errors: (none)
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | pilot state: finished 
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | transexitcode: 0
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | exeerrorcode: 0
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | exeerrordiag: 
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | exitcode: 0
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | exitmsg: OK
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | cpuconsumptiontime: 20634 s
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | nevents: 400
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | neventsw: 0
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | pid: 643226
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | pgrp: 643226
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | corecount: 8
[2026-01-15 05:27:52] 2026-01-15 10:27:18,252 | INFO     | event service: False
[2026-01-15 05:27:52] 2026-01-15 10:27:18,253 | INFO     | sizes: {0: 2283951, 1: 2283951, 9: 2284241, 11: 2284269, 3503: 2309860, 3504: 2319042, 3513: 2319212}
[2026-01-15 05:27:52] 2026-01-15 10:27:18,253 | INFO     | --------------------------------------------------
[2026-01-15 05:27:52] 2026-01-15 10:27:18,253 | INFO     | 
[2026-01-15 05:27:52] 2026-01-15 10:27:18,253 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 05:27:52] 2026-01-15 10:27:18,269 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,269 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,269 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,269 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 05:27:52] 2026-01-15 10:27:18,270 | INFO     | job 6970064313 has completed (purged errors)
[2026-01-15 05:27:52] 2026-01-15 10:27:18,271 | INFO     | overall cleanup function is called
[2026-01-15 05:27:52] 2026-01-15 10:27:19,279 | INFO     | --- collectZombieJob: --- 10, [643226]
[2026-01-15 05:27:52] 2026-01-15 10:27:19,279 | INFO     | zombie collector waiting for pid 643226
[2026-01-15 05:27:52] 2026-01-15 10:27:19,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 05:27:52] 2026-01-15 10:27:19,280 | INFO     | collected zombie processes
[2026-01-15 05:27:52] 2026-01-15 10:27:19,280 | INFO     | will attempt to kill all subprocesses of pid=643226
[2026-01-15 05:27:52] 2026-01-15 10:27:20,010 | INFO     | process IDs to be killed: [643226] (in reverse order)
[2026-01-15 05:27:52] 2026-01-15 10:27:20,197 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 05:27:52] 2026-01-15 10:27:20,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 05:27:52] 2026-01-15 10:27:20,221 | INFO     | did not find any defunct processes belonging to 643226
[2026-01-15 05:27:52] 2026-01-15 10:27:20,242 | INFO     | did not find any defunct processes belonging to 643226
[2026-01-15 05:27:52] 2026-01-15 10:27:20,242 | INFO     | ready for new job
[2026-01-15 05:27:52] 2026-01-15 10:27:20,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 05:27:52] 2026-01-15 10:27:20,245 | INFO     | ***************************************
[2026-01-15 05:27:52] 2026-01-15 10:27:20,245 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 05:27:52] 2026-01-15 10:27:20,245 | INFO     | ***************************************
[2026-01-15 05:27:52] 2026-01-15 10:27:20,245 | INFO     | 
[2026-01-15 05:27:52] 2026-01-15 10:27:20,262 | INFO     | architecture information:
[2026-01-15 05:27:52] 2026-01-15 10:27:20,270 | INFO     | executing command: cat /etc/os-release
[2026-01-15 05:27:52] 2026-01-15 10:27:20,372 | INFO     | cat /etc/os-release:
[2026-01-15 05:27:52] NAME="CentOS Linux"
[2026-01-15 05:27:52] VERSION="7 (Core)"
[2026-01-15 05:27:52] ID="centos"
[2026-01-15 05:27:52] ID_LIKE="rhel fedora"
[2026-01-15 05:27:52] VERSION_ID="7"
[2026-01-15 05:27:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 05:27:52] ANSI_COLOR="0;31"
[2026-01-15 05:27:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 05:27:52] HOME_URL="https://www.centos.org/"
[2026-01-15 05:27:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 05:27:52] 
[2026-01-15 05:27:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 05:27:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 05:27:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 05:27:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 05:27:52] 
[2026-01-15 05:27:52] 2026-01-15 10:27:20,372 | INFO     | ***************************************
[2026-01-15 05:27:52] 2026-01-15 10:27:20,876 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 05:27:52] 2026-01-15 10:27:20,904 | INFO     | sufficient remaining disk space (70030196736 B)
[2026-01-15 05:27:52] 2026-01-15 10:27:20,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 05:27:52] 2026-01-15 10:27:20,904 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 05:27:52] 2026-01-15 10:27:20,904 | INFO     | update_server=False
[2026-01-15 05:27:52] 2026-01-15 10:27:20,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 05:27:52] 2026-01-15 10:27:20,928 | INFO     | all payload control threads have been joined
[2026-01-15 05:27:52] 2026-01-15 10:27:21,047 | INFO     | all data control threads have been joined
[2026-01-15 05:27:52] 2026-01-15 10:27:21,291 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 05:27:52] 2026-01-15 10:27:21,291 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 05:27:52] 2026-01-15 10:27:21,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:27:52] 2026-01-15 10:27:21,291 | INFO     | will abort loop
[2026-01-15 05:27:52] 2026-01-15 10:27:21,910 | INFO     | [job] retrieve thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:21,934 | INFO     | [payload] control thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:21,995 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:22,051 | INFO     | [payload] failed_post thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:22,062 | INFO     | [data] control thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:22,178 | INFO     | all job control threads have been joined
[2026-01-15 05:27:52] 2026-01-15 10:27:22,189 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:22,297 | INFO     | [job] job monitor thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:22,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 05:27:52] 2026-01-15 10:27:22,759 | INFO     | [job] validate thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:22,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:27:52] 2026-01-15 10:27:22,839 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:23,184 | INFO     | [job] control thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:23,191 | INFO     | [payload] validate_post thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:23,274 | INFO     | [data] copytool_in thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:23,826 | INFO     | [job] queue monitor thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:24,335 | INFO     | [data] copytool_out thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:24,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 05:27:52] 2026-01-15 10:27:28,387 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:31,009 | INFO     | job.realtimelogging is not enabled
[2026-01-15 05:27:52] 2026-01-15 10:27:32,015 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 05:27:52] 2026-01-15 10:27:32,367 | INFO     | [monitor] cgroup control has ended
[2026-01-15 05:27:52] 2026-01-15 10:27:32,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256017274688)>', '<ExcThread(monitor, started 140255311165184)>']
[2026-01-15 05:27:52] 2026-01-15 10:27:37,578 | INFO     | all workflow threads have been joined
[2026-01-15 05:27:52] 2026-01-15 10:27:37,578 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 05:27:52] 2026-01-15 10:27:37,579 | INFO     | traces error code: 0
[2026-01-15 05:27:52] 2026-01-15 10:27:37,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 05:27:52] 2026-01-15 10:27:51,643 | INFO     | PID=635802 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 05:27:52] 2026-01-15 10:27:51,644 | INFO     | .. there are 20 such processes running
[2026-01-15 05:27:52] 2026-01-15 10:27:51,644 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 05:27:52] 2026-01-15 10:27:51,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 05:27:52] 2026-01-15 10:27:51,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 05:27:52] 2026-01-15 10:27:51,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 05:27:52] 2026-01-15 10:27:51,645 | INFO     | [monitor] control thread has ended
[2026-01-15 05:27:52] 2026-01-15 10:27:51,748 [wrapper] ==== pilot stdout END ====
[2026-01-15 05:27:52] 2026-01-15 10:27:51,753 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 05:27:52] 2026-01-15 10:27:51,755 [wrapper] pilotpid: 635802
[2026-01-15 05:27:52] 2026-01-15 10:27:51,758 [wrapper] Pilot exit status: 0
[2026-01-15 05:27:52] 2026-01-15 10:27:51,779 [wrapper] pandaids: 6970064313
[2026-01-15 05:27:52] 2026-01-15 10:27:51,880 [wrapper] cleanup supervisor_pilot  820966 635803
[2026-01-15 05:27:52] 2026-01-15 10:27:51,886 [wrapper] Test setup, not cleaning
[2026-01-15 05:27:52] 2026-01-15 10:27:51,894 [wrapper] apfmon messages muted
[2026-01-15 05:27:52] 2026-01-15 10:27:51,899 [wrapper] ==== wrapper stdout END ====
[2026-01-15 05:27:52] 2026-01-15 10:27:51,915 [wrapper] ==== wrapper stderr END ====
[2026-01-15 05:27:52]  *** Error codes and diagnostics ***
[2026-01-15 05:27:52]     "exeErrorCode": 0,
[2026-01-15 05:27:52]     "exeErrorDiag": "",
[2026-01-15 05:27:52]     "pilotErrorCode": 0,
[2026-01-15 05:27:52]     "pilotErrorDiag": "",
[2026-01-15 05:27:52]  *** Listing of results directory ***
[2026-01-15 05:27:52] total 735324
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 20:12 pilot3.tar.gz
[2026-01-15 05:27:52] -rwx------. 1 boincer umatlas     36322 Jan 14 20:16 runpilot2-wrapper.sh
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 20:19 queuedata.json
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas       100 Jan 15 04:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 05:27:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 04:27 run_atlas
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas       105 Jan 15 04:27 job.xml
[2026-01-15 05:27:52] -rw-r--r--. 2 boincer umatlas 596252248 Jan 15 04:27 EVNT.32794306._001610.pool.root.1
[2026-01-15 05:27:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 04:27 start_atlas.sh
[2026-01-15 05:27:52] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 04:27 shared
[2026-01-15 05:27:52] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 04:27 input.tar.gz
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas         0 Jan 15 04:27 boinc_lockfile
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 04:28 pandaJob.out
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas        57 Jan 15 04:28 setup.sh.local
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas   1007757 Jan 15 04:28 agis_schedconf.cvmfs.json
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas   1516246 Jan 15 04:28 agis_ddmendpoints.agis.ALL.json
[2026-01-15 05:27:52] drwx------. 5 boincer umatlas      4096 Jan 15 04:28 pilot3
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas      6944 Jan 15 05:18 init_data.xml
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas 151147843 Jan 15 05:26 HITS.48215263._040383.pool.root.1
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas       530 Jan 15 05:26 boinc_task_state.xml
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas      1032 Jan 15 05:27 memory_monitor_summary.json
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas    298409 Jan 15 05:27 log.48215263._040383.job.log.tgz.1
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas      7774 Jan 15 05:27 heartbeat.json
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 05:27 boinc_mmap_file
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas        27 Jan 15 05:27 wrapper_checkpoint.txt
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas       822 Jan 15 05:27 pilotlog.txt
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas        95 Jan 15 05:27 pilot_heartbeat.json
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas    519827 Jan 15 05:27 log.48215263._040383.job.log.1
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas       357 Jan 15 05:27 output.list
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas       620 Jan 15 05:27 runtime_log
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas    839680 Jan 15 05:27 result.tar.gz
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas       651 Jan 15 05:27 xfzNDmZ9Q08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzPnKDmk0db7n.diag
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 05:27 runtime_log.err
[2026-01-15 05:27:52] -rw-r--r--. 1 boincer umatlas     22118 Jan 15 05:27 stderr.txt
[2026-01-15 05:27:52] HITS file was successfully produced:
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas 151147843 Jan 15 05:26 shared/HITS.pool.root.1
[2026-01-15 05:27:52]  *** Contents of shared directory: ***
[2026-01-15 05:27:52] total 731312
[2026-01-15 05:27:52] -rw-r--r--. 2 boincer umatlas 596252248 Jan 15 04:27 ATLAS.root_0
[2026-01-15 05:27:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 04:27 start_atlas.sh
[2026-01-15 05:27:52] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 04:27 input.tar.gz
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas 151147843 Jan 15 05:26 HITS.pool.root.1
[2026-01-15 05:27:52] -rw-------. 1 boincer umatlas    839680 Jan 15 05:27 result.tar.gz
05:27:54 (630441): run_atlas exited; CPU time 20759.217842
05:27:54 (630441): called boinc_finish(0)

</stderr_txt>
]]>

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