Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:55:04 (30243): wrapper (7.7.26015): starting
03:55:04 (30243): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 03:55:04] Arguments: --nthreads 8
[2026-01-15 03:55:04] Threads: 8
[2026-01-15 03:55:04] Checking for CVMFS
[2026-01-15 03:55:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 03:55:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 03:55:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 03:55:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 03:55:04] 2.11.2.0 2913 119206 114008 155161 2 57 10156770 20275200 1 130560 0 24918394 99.746 8409473 32474 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 03:55:04] CVMFS is ok
[2026-01-15 03:55:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 03:55:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 03:55:04] Further information can be found at the LHC@home message board.
[2026-01-15 03:55:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 03:55:04] Checking for apptainer binary...
[2026-01-15 03:55:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 03:55:04] Running /usr/bin/apptainer --version
[2026-01-15 03:55:05] apptainer version 1.3.2-1.el7
[2026-01-15 03:55:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 03:55:06] c-204-29.aglt2.org
[2026-01-15 03:55:06] apptainer works
[2026-01-15 03:55:06] Set ATHENA_PROC_NUMBER=8
[2026-01-15 03:55:06] Set ATHENA_CORE_NUMBER=8
[2026-01-15 03:55:06] Starting ATLAS job with PandaID=6969633813
[2026-01-15 03:55:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 05:14:46]  *** The last 200 lines of the pilot log: ***
[2026-01-15 05:14:46]  mtime=0
[2026-01-15 05:14:46]  protocol_id=None
[2026-01-15 05:14:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 05:14:46]  replicas=None
[2026-01-15 05:14:46]  scope=mc23_13p6TeV
[2026-01-15 05:14:46]  status=None
[2026-01-15 05:14:46]  status_code=0
[2026-01-15 05:14:46]  storage_token=
[2026-01-15 05:14:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969633813/log.48215263._034726.job.log.tgz.1
[2026-01-15 05:14:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/ad/log.48215263._034726.job.log.tgz.1
[2026-01-15 05:14:46]  workdir=None
[2026-01-15 05:14:46] ]
[2026-01-15 05:14:46] 2026-01-15 10:14:04,945 | INFO     | transferring file log.48215263._034726.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969633813/log.48215263._034726.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 05:14:46] 2026-01-15 10:14:04,945 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969633813/log.48215263._034726.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._034726.job
[2026-01-15 05:14:46] 2026-01-15 10:14:04,971 | INFO     | adding to output.list: log.48215263._034726.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/ad/log.48215263._034726.job.log.tg
[2026-01-15 05:14:46] 2026-01-15 10:14:04,972 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 05:14:46] 2026-01-15 10:14:04,972 | INFO     | summary of transferred files:
[2026-01-15 05:14:46] 2026-01-15 10:14:04,973 | INFO     |  -- lfn=log.48215263._034726.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 05:14:46] 2026-01-15 10:14:04,973 | INFO     | stage-out finished correctly
[2026-01-15 05:14:46] 2026-01-15 10:14:05,068 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 05:14:46] 2026-01-15 10:14:05,160 | INFO     | job 6969633813 has state=finished
[2026-01-15 05:14:46] 2026-01-15 10:14:05,160 | INFO     | preparing for final server update for job 6969633813 in state='finished'
[2026-01-15 05:14:46] 2026-01-15 10:14:05,161 | INFO     | this job has now completed (state=finished)
[2026-01-15 05:14:46] 2026-01-15 10:14:05,161 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 05:14:46] 2026-01-15 10:14:05,161 | INFO     | log transfer has been attempted: DONE
[2026-01-15 05:14:46] 2026-01-15 10:14:05,162 | INFO     | job 6969633813 has finished - writing final server update
[2026-01-15 05:14:46] 2026-01-15 10:14:05,162 | INFO     | total number of processed events: 400 (read)
[2026-01-15 05:14:46] 2026-01-15 10:14:05,163 | INFO     | executing command: lscpu
[2026-01-15 05:14:46] 2026-01-15 10:14:05,192 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 05:14:46] 2026-01-15 10:14:06,698 | INFO     | time since job start (4721s) is within the limit (349056.0s)
[2026-01-15 05:14:46] 2026-01-15 10:14:06,866 | INFO     | monitor loop #351: job 0:6969633813 is in state 'finished'
[2026-01-15 05:14:46] 2026-01-15 10:14:06,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 05:14:46] 2026-01-15 10:14:08,704 | INFO     | time since job start (4723s) is within the limit (349056.0s)
[2026-01-15 05:14:46] 2026-01-15 10:14:09,368 | INFO     | monitor loop #352: job 0:6969633813 is in state 'finished'
[2026-01-15 05:14:46] 2026-01-15 10:14:09,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 05:14:46] 2026-01-15 10:14:10,710 | INFO     | time since job start (4725s) is within the limit (349056.0s)
[2026-01-15 05:14:46] 2026-01-15 10:14:11,872 | INFO     | monitor loop #353: job 0:6969633813 is in state 'finished'
[2026-01-15 05:14:46] 2026-01-15 10:14:11,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 05:14:46] 2026-01-15 10:14:12,487 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 05:14:46] 2026-01-15 10:14:12,490 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.5
[2026-01-15 05:14:46] 2026-01-15 10:14:12,491 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969633813/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 05:14:46] 2026-01-15 10:14:12,492 | INFO     | extracted standard info from prmon json
[2026-01-15 05:14:46] 2026-01-15 10:14:12,492 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 05:14:46] 2026-01-15 10:14:12,492 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 05:14:46] 2026-01-15 10:14:12,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 05:14:46] 2026-01-15 10:14:12,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 05:14:46] 2026-01-15 10:14:12,494 | INFO     | fitting pss+swap vs Time
[2026-01-15 05:14:46] 2026-01-15 10:14:12,495 | INFO     | sum of square deviations: 106336877.5
[2026-01-15 05:14:46] 2026-01-15 10:14:12,495 | INFO     | sum of deviations: -5894398463.0
[2026-01-15 05:14:46] 2026-01-15 10:14:12,495 | INFO     | mean x: 1768469766.5
[2026-01-15 05:14:46] 2026-01-15 10:14:12,495 | INFO     | mean y: 2600456.4285714286
[2026-01-15 05:14:46] 2026-01-15 10:14:12,496 | INFO     | intersect: 98031296790.11177
[2026-01-15 05:14:46] 2026-01-15 10:14:12,496 | INFO     | chi2: 0.07220455623415366
[2026-01-15 05:14:46] 2026-01-15 10:14:12,496 | INFO     | current memory leak: -55.43 B/s (using 70 data points, chi2=0.07)
[2026-01-15 05:14:46] 2026-01-15 10:14:12,496 | INFO     | could have reported an average CPU frequency of 1909 MHz (6 samples)
[2026-01-15 05:14:46] 2026-01-15 10:14:12,497 | INFO     | ..............................
[2026-01-15 05:14:46] 2026-01-15 10:14:12,497 | INFO     | . Timing measurements:
[2026-01-15 05:14:46] 2026-01-15 10:14:12,497 | INFO     | . get job = 0 s
[2026-01-15 05:14:46] 2026-01-15 10:14:12,497 | INFO     | . initial setup = 2 s
[2026-01-15 05:14:46] 2026-01-15 10:14:12,497 | INFO     | . payload setup = 8 s
[2026-01-15 05:14:46] 2026-01-15 10:14:12,497 | INFO     | . stage-in = 0 s
[2026-01-15 05:14:46] 2026-01-15 10:14:12,497 | INFO     | . payload execution = 4691 s
[2026-01-15 05:14:46] 2026-01-15 10:14:12,498 | INFO     | . stage-out = 1 s
[2026-01-15 05:14:46] 2026-01-15 10:14:12,498 | INFO     | . log creation = 0 s
[2026-01-15 05:14:46] 2026-01-15 10:14:12,498 | INFO     | ..............................
[2026-01-15 05:14:46] 2026-01-15 10:14:12,716 | INFO     | time since job start (4727s) is within the limit (349056.0s)
[2026-01-15 05:14:46] 2026-01-15 10:14:12,975 | INFO     | 
[2026-01-15 05:14:46] 2026-01-15 10:14:12,976 | INFO     | job summary report
[2026-01-15 05:14:46] 2026-01-15 10:14:12,976 | INFO     | --------------------------------------------------
[2026-01-15 05:14:46] 2026-01-15 10:14:12,976 | INFO     | PanDA job id: 6969633813
[2026-01-15 05:14:46] 2026-01-15 10:14:12,976 | INFO     | task id: 48215263
[2026-01-15 05:14:46] 2026-01-15 10:14:12,976 | INFO     | errors: (none)
[2026-01-15 05:14:46] 2026-01-15 10:14:12,977 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 05:14:46] 2026-01-15 10:14:12,977 | INFO     | pilot state: finished 
[2026-01-15 05:14:46] 2026-01-15 10:14:12,977 | INFO     | transexitcode: 0
[2026-01-15 05:14:46] 2026-01-15 10:14:12,977 | INFO     | exeerrorcode: 0
[2026-01-15 05:14:46] 2026-01-15 10:14:12,977 | INFO     | exeerrordiag: 
[2026-01-15 05:14:46] 2026-01-15 10:14:12,977 | INFO     | exitcode: 0
[2026-01-15 05:14:46] 2026-01-15 10:14:12,978 | INFO     | exitmsg: OK
[2026-01-15 05:14:46] 2026-01-15 10:14:12,978 | INFO     | cpuconsumptiontime: 34157 s
[2026-01-15 05:14:46] 2026-01-15 10:14:12,978 | INFO     | nevents: 400
[2026-01-15 05:14:46] 2026-01-15 10:14:12,978 | INFO     | neventsw: 0
[2026-01-15 05:14:46] 2026-01-15 10:14:12,978 | INFO     | pid: 8097
[2026-01-15 05:14:46] 2026-01-15 10:14:12,978 | INFO     | pgrp: 8097
[2026-01-15 05:14:46] 2026-01-15 10:14:12,979 | INFO     | corecount: 8
[2026-01-15 05:14:46] 2026-01-15 10:14:12,979 | INFO     | event service: False
[2026-01-15 05:14:46] 2026-01-15 10:14:12,979 | INFO     | sizes: {0: 2283781, 1: 2283980, 7: 2284242, 12: 2284270, 4700: 2310428, 4702: 2319610, 4710: 2319748}
[2026-01-15 05:14:46] 2026-01-15 10:14:12,979 | INFO     | --------------------------------------------------
[2026-01-15 05:14:46] 2026-01-15 10:14:12,979 | INFO     | 
[2026-01-15 05:14:46] 2026-01-15 10:14:12,980 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 05:14:46] 2026-01-15 10:14:13,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,009 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,012 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 05:14:46] 2026-01-15 10:14:13,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,012 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 05:14:46] 2026-01-15 10:14:13,013 | INFO     | job 6969633813 has completed (purged errors)
[2026-01-15 05:14:46] 2026-01-15 10:14:13,013 | INFO     | overall cleanup function is called
[2026-01-15 05:14:46] 2026-01-15 10:14:14,021 | INFO     | --- collectZombieJob: --- 10, [8097]
[2026-01-15 05:14:46] 2026-01-15 10:14:14,022 | INFO     | zombie collector waiting for pid 8097
[2026-01-15 05:14:46] 2026-01-15 10:14:14,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 05:14:46] 2026-01-15 10:14:14,028 | INFO     | collected zombie processes
[2026-01-15 05:14:46] 2026-01-15 10:14:14,029 | INFO     | will attempt to kill all subprocesses of pid=8097
[2026-01-15 05:14:46] 2026-01-15 10:14:14,119 | INFO     | process IDs to be killed: [8097] (in reverse order)
[2026-01-15 05:14:46] 2026-01-15 10:14:14,177 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 05:14:46] 2026-01-15 10:14:14,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 05:14:46] 2026-01-15 10:14:14,182 | INFO     | did not find any defunct processes belonging to 8097
[2026-01-15 05:14:46] 2026-01-15 10:14:14,186 | INFO     | did not find any defunct processes belonging to 8097
[2026-01-15 05:14:46] 2026-01-15 10:14:14,186 | INFO     | ready for new job
[2026-01-15 05:14:46] 2026-01-15 10:14:14,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 05:14:46] 2026-01-15 10:14:14,188 | INFO     | ***************************************
[2026-01-15 05:14:46] 2026-01-15 10:14:14,188 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 05:14:46] 2026-01-15 10:14:14,188 | INFO     | ***************************************
[2026-01-15 05:14:46] 2026-01-15 10:14:14,188 | INFO     | 
[2026-01-15 05:14:46] 2026-01-15 10:14:14,189 | INFO     | architecture information:
[2026-01-15 05:14:46] 2026-01-15 10:14:14,189 | INFO     | executing command: cat /etc/os-release
[2026-01-15 05:14:46] 2026-01-15 10:14:14,208 | INFO     | cat /etc/os-release:
[2026-01-15 05:14:46] NAME="CentOS Linux"
[2026-01-15 05:14:46] VERSION="7 (Core)"
[2026-01-15 05:14:46] ID="centos"
[2026-01-15 05:14:46] ID_LIKE="rhel fedora"
[2026-01-15 05:14:46] VERSION_ID="7"
[2026-01-15 05:14:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 05:14:46] ANSI_COLOR="0;31"
[2026-01-15 05:14:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 05:14:46] HOME_URL="https://www.centos.org/"
[2026-01-15 05:14:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 05:14:46] 
[2026-01-15 05:14:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 05:14:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 05:14:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 05:14:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 05:14:46] 
[2026-01-15 05:14:46] 2026-01-15 10:14:14,208 | INFO     | ***************************************
[2026-01-15 05:14:46] 2026-01-15 10:14:14,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 05:14:46] 2026-01-15 10:14:14,732 | INFO     | sufficient remaining disk space (17855152128 B)
[2026-01-15 05:14:46] 2026-01-15 10:14:14,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 05:14:46] 2026-01-15 10:14:14,733 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 05:14:46] 2026-01-15 10:14:14,733 | INFO     | update_server=False
[2026-01-15 05:14:46] 2026-01-15 10:14:14,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 05:14:46] 2026-01-15 10:14:14,998 | INFO     | all data control threads have been joined
[2026-01-15 05:14:46] 2026-01-15 10:14:15,102 | INFO     | all payload control threads have been joined
[2026-01-15 05:14:46] 2026-01-15 10:14:15,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:14:46] 2026-01-15 10:14:15,382 | INFO     | aborting loop
[2026-01-15 05:14:46] 2026-01-15 10:14:15,585 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 05:14:46] 2026-01-15 10:14:15,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 05:14:46] 2026-01-15 10:14:15,737 | INFO     | [job] retrieve thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:15,743 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:15,753 | INFO     | [job] validate thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:15,837 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:15,908 | INFO     | all job control threads have been joined
[2026-01-15 05:14:46] 2026-01-15 10:14:16,005 | INFO     | [data] control thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:16,087 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:16,106 | INFO     | [payload] control thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:16,110 | INFO     | [data] copytool_in thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:16,229 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:16,387 | INFO     | [job] job monitor thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:16,388 | INFO     | [payload] failed_post thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:16,914 | INFO     | [job] control thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:17,148 | INFO     | [payload] validate_post thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:17,591 | INFO     | [data] copytool_out thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:17,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:14:46] 2026-01-15 10:14:18,605 | INFO     | [job] queue monitor thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:19,675 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 05:14:46] 2026-01-15 10:14:32,266 | INFO     | [monitor] cgroup control has ended
[2026-01-15 05:14:46] 2026-01-15 10:14:32,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364895160128)>', '<ExcThread(monitor, started 140363993954048)>']
[2026-01-15 05:14:46] 2026-01-15 10:14:37,596 | INFO     | all workflow threads have been joined
[2026-01-15 05:14:46] 2026-01-15 10:14:37,596 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 05:14:46] 2026-01-15 10:14:37,597 | INFO     | traces error code: 0
[2026-01-15 05:14:46] 2026-01-15 10:14:37,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 05:14:46] 2026-01-15 10:14:45,939 | INFO     | PID=1533 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-15 05:14:46] 2026-01-15 10:14:45,940 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 05:14:46] 2026-01-15 10:14:45,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 05:14:46] 2026-01-15 10:14:45,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 05:14:46] 2026-01-15 10:14:45,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 05:14:46] 2026-01-15 10:14:45,941 | INFO     | [monitor] control thread has ended
[2026-01-15 05:14:46] 2026-01-15 10:14:46,085 [wrapper] ==== pilot stdout END ====
[2026-01-15 05:14:46] 2026-01-15 10:14:46,090 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 05:14:46] 2026-01-15 10:14:46,094 [wrapper] pilotpid: 1533
[2026-01-15 05:14:46] 2026-01-15 10:14:46,099 [wrapper] Pilot exit status: 0
[2026-01-15 05:14:46] 2026-01-15 10:14:46,116 [wrapper] pandaids: 6969633813
[2026-01-15 05:14:46] 2026-01-15 10:14:46,163 [wrapper] cleanup supervisor_pilot 12754 1534
[2026-01-15 05:14:46] 2026-01-15 10:14:46,168 [wrapper] Test setup, not cleaning
[2026-01-15 05:14:46] 2026-01-15 10:14:46,173 [wrapper] apfmon messages muted
[2026-01-15 05:14:46] 2026-01-15 10:14:46,177 [wrapper] ==== wrapper stdout END ====
[2026-01-15 05:14:46] 2026-01-15 10:14:46,181 [wrapper] ==== wrapper stderr END ====
[2026-01-15 05:14:46]  *** Error codes and diagnostics ***
[2026-01-15 05:14:46]     "exeErrorCode": 0,
[2026-01-15 05:14:46]     "exeErrorDiag": "",
[2026-01-15 05:14:46]     "pilotErrorCode": 0,
[2026-01-15 05:14:46]     "pilotErrorDiag": "",
[2026-01-15 05:14:46]  *** Listing of results directory ***
[2026-01-15 05:14:46] total 731296
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 15:15 pilot3.tar.gz
[2026-01-15 05:14:46] -rwx------ 1 boincer umatlas     36322 Jan 14 15:19 runpilot2-wrapper.sh
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 15:24 queuedata.json
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas       100 Jan 15 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 05:14:46] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 03:55 run_atlas
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas       105 Jan 15 03:55 job.xml
[2026-01-15 05:14:46] -rw-r--r-- 2 boincer umatlas 595076113 Jan 15 03:55 EVNT.32794306._001388.pool.root.1
[2026-01-15 05:14:46] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 03:55 start_atlas.sh
[2026-01-15 05:14:46] drwxrwx--x 2 boincer umatlas      4096 Jan 15 03:55 shared
[2026-01-15 05:14:46] -rw-r--r-- 2 boincer umatlas    592407 Jan 15 03:55 input.tar.gz
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas         0 Jan 15 03:55 boinc_lockfile
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 03:55 pandaJob.out
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas        57 Jan 15 03:55 setup.sh.local
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas    999472 Jan 15 03:55 agis_schedconf.cvmfs.json
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas   1516246 Jan 15 03:55 agis_ddmendpoints.agis.ALL.json
[2026-01-15 05:14:46] drwx------ 5 boincer umatlas      4096 Jan 15 03:55 pilot3
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas      5910 Jan 15 05:12 init_data.xml
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas       530 Jan 15 05:13 boinc_task_state.xml
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas 147810826 Jan 15 05:13 HITS.48215263._034726.pool.root.1
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas      1058 Jan 15 05:14 memory_monitor_summary.json
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas    336677 Jan 15 05:14 log.48215263._034726.job.log.tgz.1
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas      7844 Jan 15 05:14 heartbeat.json
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 05:14 boinc_mmap_file
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas        27 Jan 15 05:14 wrapper_checkpoint.txt
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas        95 Jan 15 05:14 pilot_heartbeat.json
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas       744 Jan 15 05:14 pilotlog.txt
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas    681608 Jan 15 05:14 log.48215263._034726.job.log.1
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas       357 Jan 15 05:14 output.list
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas       620 Jan 15 05:14 runtime_log
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas   1034240 Jan 15 05:14 result.tar.gz
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas       658 Jan 15 05:14 xEsNDm0VM08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPbmKDmKHI9Mo.diag
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas      9342 Jan 15 05:14 runtime_log.err
[2026-01-15 05:14:46] -rw-r--r-- 1 boincer umatlas     21728 Jan 15 05:14 stderr.txt
[2026-01-15 05:14:46] HITS file was successfully produced:
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas 147810826 Jan 15 05:13 shared/HITS.pool.root.1
[2026-01-15 05:14:46]  *** Contents of shared directory: ***
[2026-01-15 05:14:46] total 727092
[2026-01-15 05:14:46] -rw-r--r-- 2 boincer umatlas 595076113 Jan 15 03:55 ATLAS.root_0
[2026-01-15 05:14:46] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 03:55 start_atlas.sh
[2026-01-15 05:14:46] -rw-r--r-- 2 boincer umatlas    592407 Jan 15 03:55 input.tar.gz
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas 147810826 Jan 15 05:13 HITS.pool.root.1
[2026-01-15 05:14:46] -rw------- 1 boincer umatlas   1034240 Jan 15 05:14 result.tar.gz
05:14:47 (30243): run_atlas exited; CPU time 34124.151895
05:14:47 (30243): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN