Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:59:53 (3780092): wrapper (7.7.26015): starting
09:59:53 (3780092): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 09:59:53] Arguments: --nthreads 12
[2026-01-16 09:59:53] Threads: 12
[2026-01-16 09:59:53] Checking for CVMFS
[2026-01-16 09:59:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 09:59:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 09:59:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 09:59:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 09:59:55] 2.13.3.0 40677 10327 73992 155202 2 236 3993625 4096001 19451 130560 0 82622098 99.981 1146455 231 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 09:59:55] CVMFS is ok
[2026-01-16 09:59:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 09:59:55] Checking for apptainer binary...
[2026-01-16 09:59:55] apptainer is not installed, using version from CVMFS
[2026-01-16 09:59:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 09:59:57] epyc7v12
[2026-01-16 09:59:57] apptainer works
[2026-01-16 09:59:57] Set ATHENA_PROC_NUMBER=12
[2026-01-16 09:59:57] Set ATHENA_CORE_NUMBER=12
[2026-01-16 09:59:57] Starting ATLAS job with PandaID=6970288045
[2026-01-16 09:59:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31423/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 11:32:44]  *** The last 200 lines of the pilot log: ***
[2026-01-16 11:32:44] 2026-01-16 11:31:18,471 | INFO     | monitor loop #357: job 0:6970288045 is in state 'finished'
[2026-01-16 11:32:44] 2026-01-16 11:31:18,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 11:32:44] 2026-01-16 11:31:19,268 | INFO     | time since job start (5450s) is within the limit (349056.0s)
[2026-01-16 11:32:44] 2026-01-16 11:31:20,975 | INFO     | monitor loop #358: job 0:6970288045 is in state 'finished'
[2026-01-16 11:32:44] 2026-01-16 11:31:20,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 11:32:44] 2026-01-16 11:31:21,276 | INFO     | time since job start (5452s) is within the limit (349056.0s)
[2026-01-16 11:32:44] 2026-01-16 11:31:21,413 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 11:32:44] 2026-01-16 11:31:23,281 | INFO     | time since job start (5454s) is within the limit (349056.0s)
[2026-01-16 11:32:44] 2026-01-16 11:31:23,478 | INFO     | monitor loop #359: job 0:6970288045 is in state 'finished'
[2026-01-16 11:32:44] 2026-01-16 11:31:23,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 11:32:44] 2026-01-16 11:31:24,535 | INFO     | job 6970288045 has state=finished
[2026-01-16 11:32:44] 2026-01-16 11:31:24,535 | INFO     | preparing for final server update for job 6970288045 in state='finished'
[2026-01-16 11:32:44] 2026-01-16 11:31:24,536 | INFO     | this job has now completed (state=finished)
[2026-01-16 11:32:44] 2026-01-16 11:31:24,536 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 11:32:44] 2026-01-16 11:31:24,536 | INFO     | log transfer has been attempted: DONE
[2026-01-16 11:32:44] 2026-01-16 11:31:24,536 | INFO     | job 6970288045 has finished - writing final server update
[2026-01-16 11:32:44] 2026-01-16 11:31:24,537 | INFO     | total number of processed events: 400 (read)
[2026-01-16 11:32:44] 2026-01-16 11:31:24,537 | INFO     | executing command: lscpu
[2026-01-16 11:32:44] 2026-01-16 11:31:24,762 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 11:32:44] 2026-01-16 11:31:25,292 | INFO     | time since job start (5456s) is within the limit (349056.0s)
[2026-01-16 11:32:44] 2026-01-16 11:31:25,986 | INFO     | monitor loop #360: job 0:6970288045 is in state 'finished'
[2026-01-16 11:32:44] 2026-01-16 11:31:25,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 11:32:44] 2026-01-16 11:31:27,297 | INFO     | time since job start (5458s) is within the limit (349056.0s)
[2026-01-16 11:32:44] 2026-01-16 11:31:28,489 | INFO     | monitor loop #361: job 0:6970288045 is in state 'finished'
[2026-01-16 11:32:44] 2026-01-16 11:31:28,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 11:32:44] 2026-01-16 11:31:29,305 | INFO     | time since job start (5460s) is within the limit (349056.0s)
[2026-01-16 11:32:44] 2026-01-16 11:31:30,992 | INFO     | monitor loop #362: job 0:6970288045 is in state 'finished'
[2026-01-16 11:32:44] 2026-01-16 11:31:30,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 11:32:44] 2026-01-16 11:31:31,310 | INFO     | time since job start (5462s) is within the limit (349056.0s)
[2026-01-16 11:32:44] 2026-01-16 11:31:33,315 | INFO     | time since job start (5464s) is within the limit (349056.0s)
[2026-01-16 11:32:44] 2026-01-16 11:31:33,499 | INFO     | monitor loop #363: job 0:6970288045 is in state 'finished'
[2026-01-16 11:32:44] 2026-01-16 11:31:33,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 11:32:44] 2026-01-16 11:31:35,320 | INFO     | time since job start (5466s) is within the limit (349056.0s)
[2026-01-16 11:32:44] 2026-01-16 11:31:36,002 | INFO     | monitor loop #364: job 0:6970288045 is in state 'finished'
[2026-01-16 11:32:44] 2026-01-16 11:31:36,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 11:32:44] 2026-01-16 11:31:37,896 | INFO     | PID=3788407 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 11:32:44] 2026-01-16 11:31:37,896 | INFO     | .. there are 22 such processes running
[2026-01-16 11:32:44] 2026-01-16 11:31:38,338 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 11:32:44] 2026-01-16 11:31:38,384 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2407.1959609375
[2026-01-16 11:32:44] 2026-01-16 11:31:38,439 | INFO     | using path: /opt/boinc/instance_homes/boinc_31423/slots/1/PanDA_Pilot-6970288045/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 11:32:44] 2026-01-16 11:31:38,441 | INFO     | extracted standard info from prmon json
[2026-01-16 11:32:44] 2026-01-16 11:31:38,441 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 11:32:44] 2026-01-16 11:31:38,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 11:32:44] 2026-01-16 11:31:38,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 11:32:44] 2026-01-16 11:31:38,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 11:32:44] 2026-01-16 11:31:38,447 | INFO     | fitting pss+swap vs Time
[2026-01-16 11:32:44] 2026-01-16 11:31:38,447 | INFO     | sum of square deviations: 170944600.5
[2026-01-16 11:32:44] 2026-01-16 11:31:38,448 | INFO     | sum of deviations: 5384293862.500001
[2026-01-16 11:32:44] 2026-01-16 11:31:38,448 | INFO     | mean x: 1768560474.5
[2026-01-16 11:32:44] 2026-01-16 11:31:38,448 | INFO     | mean y: 2680302.4024390243
[2026-01-16 11:32:44] 2026-01-16 11:31:38,448 | INFO     | intersect: -55702204674.707085
[2026-01-16 11:32:44] 2026-01-16 11:31:38,449 | INFO     | chi2: 0.1027874352148243
[2026-01-16 11:32:44] 2026-01-16 11:31:38,449 | INFO     | current memory leak: 31.50 B/s (using 82 data points, chi2=0.10)
[2026-01-16 11:32:44] 2026-01-16 11:31:38,452 | INFO     | could have reported an average CPU frequency of 2400 MHz (7 samples)
[2026-01-16 11:32:44] 2026-01-16 11:31:38,452 | INFO     | ..............................
[2026-01-16 11:32:44] 2026-01-16 11:31:38,452 | INFO     | . Timing measurements:
[2026-01-16 11:32:44] 2026-01-16 11:31:38,453 | INFO     | . get job = 0 s
[2026-01-16 11:32:44] 2026-01-16 11:31:38,453 | INFO     | . initial setup = 2 s
[2026-01-16 11:32:44] 2026-01-16 11:31:38,453 | INFO     | . payload setup = 18 s
[2026-01-16 11:32:44] 2026-01-16 11:31:38,453 | INFO     | . stage-in = 0 s
[2026-01-16 11:32:44] 2026-01-16 11:31:38,453 | INFO     | . payload execution = 5388 s
[2026-01-16 11:32:44] 2026-01-16 11:31:38,453 | INFO     | . stage-out = 1 s
[2026-01-16 11:32:44] 2026-01-16 11:31:38,453 | INFO     | . log creation = 0 s
[2026-01-16 11:32:44] 2026-01-16 11:31:38,453 | INFO     | ..............................
[2026-01-16 11:32:44] 2026-01-16 11:31:38,709 | INFO     | 
[2026-01-16 11:32:44] 2026-01-16 11:31:38,709 | INFO     | job summary report
[2026-01-16 11:32:44] 2026-01-16 11:31:38,709 | INFO     | --------------------------------------------------
[2026-01-16 11:32:44] 2026-01-16 11:31:38,709 | INFO     | PanDA job id: 6970288045
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | task id: 48215263
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | errors: (none)
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | pilot state: finished 
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | transexitcode: 0
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | exeerrorcode: 0
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | exeerrordiag: 
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | exitcode: 0
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | exitmsg: OK
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | cpuconsumptiontime: 29991 s
[2026-01-16 11:32:44] 2026-01-16 11:31:38,710 | INFO     | nevents: 400
[2026-01-16 11:32:44] 2026-01-16 11:31:38,711 | INFO     | neventsw: 0
[2026-01-16 11:32:44] 2026-01-16 11:31:38,711 | INFO     | pid: 3796187
[2026-01-16 11:32:44] 2026-01-16 11:31:38,711 | INFO     | pgrp: 3796187
[2026-01-16 11:32:44] 2026-01-16 11:31:38,711 | INFO     | corecount: 12
[2026-01-16 11:32:44] 2026-01-16 11:31:38,711 | INFO     | event service: False
[2026-01-16 11:32:44] 2026-01-16 11:31:38,711 | INFO     | sizes: {0: 2283804, 1: 2284003, 12: 2284003, 15: 2284293, 23: 2284321, 5410: 2311234, 5411: 2320278, 5415: 2320334, 5432: 2320358}
[2026-01-16 11:32:44] 2026-01-16 11:31:38,711 | INFO     | --------------------------------------------------
[2026-01-16 11:32:44] 2026-01-16 11:31:38,711 | INFO     | 
[2026-01-16 11:32:44] 2026-01-16 11:31:38,711 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31423/slots/1
[2026-01-16 11:32:44] 2026-01-16 11:31:38,783 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,783 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,783 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,783 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,783 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,785 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,785 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 11:32:44] 2026-01-16 11:31:38,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,785 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 11:32:44] 2026-01-16 11:31:38,785 | INFO     | job 6970288045 has completed (purged errors)
[2026-01-16 11:32:44] 2026-01-16 11:31:38,785 | INFO     | overall cleanup function is called
[2026-01-16 11:32:44] 2026-01-16 11:31:39,803 | INFO     | --- collectZombieJob: --- 10, [3796187]
[2026-01-16 11:32:44] 2026-01-16 11:31:39,803 | INFO     | zombie collector waiting for pid 3796187
[2026-01-16 11:32:44] 2026-01-16 11:31:39,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 11:32:44] 2026-01-16 11:31:39,804 | INFO     | collected zombie processes
[2026-01-16 11:32:44] 2026-01-16 11:31:39,804 | INFO     | will attempt to kill all subprocesses of pid=3796187
[2026-01-16 11:32:44] 2026-01-16 11:31:41,057 | INFO     | process IDs to be killed: [3796187] (in reverse order)
[2026-01-16 11:32:44] 2026-01-16 11:31:41,778 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 11:32:44] 2026-01-16 11:31:41,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 11:32:44] 2026-01-16 11:31:41,839 | INFO     | did not find any defunct processes belonging to 3796187
[2026-01-16 11:32:44] 2026-01-16 11:31:41,894 | INFO     | did not find any defunct processes belonging to 3796187
[2026-01-16 11:32:44] 2026-01-16 11:31:41,894 | INFO     | ready for new job
[2026-01-16 11:32:44] 2026-01-16 11:31:41,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 11:32:44] 2026-01-16 11:31:41,900 | INFO     | ***************************************
[2026-01-16 11:32:44] 2026-01-16 11:31:41,906 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 11:32:44] 2026-01-16 11:31:41,906 | INFO     | ***************************************
[2026-01-16 11:32:44] 2026-01-16 11:31:41,906 | INFO     | 
[2026-01-16 11:32:44] 2026-01-16 11:31:41,930 | INFO     | architecture information:
[2026-01-16 11:32:44] 2026-01-16 11:31:41,930 | INFO     | executing command: cat /etc/os-release
[2026-01-16 11:32:44] 2026-01-16 11:31:41,983 | INFO     | cat /etc/os-release:
[2026-01-16 11:32:44] NAME="CentOS Linux"
[2026-01-16 11:32:44] VERSION="7 (Core)"
[2026-01-16 11:32:44] ID="centos"
[2026-01-16 11:32:44] ID_LIKE="rhel fedora"
[2026-01-16 11:32:44] VERSION_ID="7"
[2026-01-16 11:32:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 11:32:44] ANSI_COLOR="0;31"
[2026-01-16 11:32:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 11:32:44] HOME_URL="https://www.centos.org/"
[2026-01-16 11:32:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 11:32:44] 
[2026-01-16 11:32:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 11:32:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 11:32:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 11:32:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 11:32:44] 
[2026-01-16 11:32:44] 2026-01-16 11:31:41,983 | INFO     | ***************************************
[2026-01-16 11:32:44] 2026-01-16 11:31:42,487 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31423/slots/1
[2026-01-16 11:32:44] 2026-01-16 11:31:42,536 | INFO     | sufficient remaining disk space (277078867968 B)
[2026-01-16 11:32:44] 2026-01-16 11:31:42,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 11:32:44] 2026-01-16 11:31:42,537 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 11:32:44] 2026-01-16 11:31:42,537 | INFO     | update_server=False
[2026-01-16 11:32:44] 2026-01-16 11:31:42,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 11:32:44] 2026-01-16 11:31:42,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 11:32:44] 2026-01-16 11:31:42,538 | INFO     | aborting loop
[2026-01-16 11:32:44] 2026-01-16 11:31:42,851 | INFO     | all data control threads have been joined
[2026-01-16 11:32:44] 2026-01-16 11:31:43,152 | INFO     | all payload control threads have been joined
[2026-01-16 11:32:44] 2026-01-16 11:31:43,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 11:32:44] 2026-01-16 11:31:43,543 | INFO     | [job] job monitor thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:43,544 | INFO     | [job] retrieve thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:43,674 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 11:32:44] 2026-01-16 11:31:43,721 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:43,746 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:43,856 | INFO     | [data] control thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:44,063 | INFO     | all job control threads have been joined
[2026-01-16 11:32:44] 2026-01-16 11:31:44,157 | INFO     | [payload] control thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:44,248 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:44,614 | INFO     | [payload] validate_post thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:44,679 | INFO     | [job] queue monitor thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:44,688 | INFO     | [payload] failed_post thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:44,718 | INFO     | [job] validate thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:44,720 | INFO     | [data] copytool_in thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:45,068 | INFO     | [job] control thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:45,478 | INFO     | [data] copytool_out thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:45,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 11:32:44] 2026-01-16 11:31:49,611 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:31:52,766 | INFO     | job.realtimelogging is not enabled
[2026-01-16 11:32:44] 2026-01-16 11:31:53,771 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 11:32:44] 2026-01-16 11:32:11,183 | INFO     | PID=3788407 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 11:32:44] 2026-01-16 11:32:11,183 | INFO     | .. there are 22 such processes running
[2026-01-16 11:32:44] 2026-01-16 11:32:11,183 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 11:32:44] 2026-01-16 11:32:11,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 11:32:44] 2026-01-16 11:32:11,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 11:32:44] 2026-01-16 11:32:37,532 | INFO     | [monitor] cgroup control has ended
[2026-01-16 11:32:44] 2026-01-16 11:32:38,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135438749587264)>', '<ExcThread(monitor, started 135438337554176)>']
[2026-01-16 11:32:44] 2026-01-16 11:32:39,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 11:32:44] 2026-01-16 11:32:39,332 | INFO     | [monitor] control thread has ended
[2026-01-16 11:32:44] 2026-01-16 11:32:43,562 | INFO     | all workflow threads have been joined
[2026-01-16 11:32:44] 2026-01-16 11:32:43,562 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 11:32:44] 2026-01-16 11:32:43,563 | INFO     | traces error code: 0
[2026-01-16 11:32:44] 2026-01-16 11:32:43,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 11:32:44] 2026-01-16 11:32:43,778 [wrapper] ==== pilot stdout END ====
[2026-01-16 11:32:44] 2026-01-16 11:32:43,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 11:32:44] 2026-01-16 11:32:43,793 [wrapper] pilotpid: 3788407
[2026-01-16 11:32:44] 2026-01-16 11:32:43,804 [wrapper] Pilot exit status: 0
[2026-01-16 11:32:44] 2026-01-16 11:32:43,840 [wrapper] pandaids: 6970288045
[2026-01-16 11:32:44] 2026-01-16 11:32:44,013 [wrapper] cleanup supervisor_pilot   61328 3788408
[2026-01-16 11:32:44] 2026-01-16 11:32:44,022 [wrapper] Test setup, not cleaning
[2026-01-16 11:32:44] 2026-01-16 11:32:44,033 [wrapper] apfmon messages muted
[2026-01-16 11:32:44] 2026-01-16 11:32:44,041 [wrapper] ==== wrapper stdout END ====
[2026-01-16 11:32:44] 2026-01-16 11:32:44,049 [wrapper] ==== wrapper stderr END ====
[2026-01-16 11:32:44]  *** Error codes and diagnostics ***
[2026-01-16 11:32:44]     "exeErrorCode": 0,
[2026-01-16 11:32:44]     "exeErrorDiag": "",
[2026-01-16 11:32:44]     "pilotErrorCode": 0,
[2026-01-16 11:32:44]     "pilotErrorDiag": "",
[2026-01-16 11:32:44]  *** Listing of results directory ***
[2026-01-16 11:32:44] total 733740
[2026-01-16 11:32:44] -rw-r--r-- 1 boinc boinc    579449 Jan 15 04:50 pilot3.tar.gz
[2026-01-16 11:32:44] -rwx------ 1 boinc boinc     36322 Jan 15 04:53 runpilot2-wrapper.sh
[2026-01-16 11:32:44] -rw-r--r-- 1 boinc boinc      5112 Jan 15 04:54 queuedata.json
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc       100 Jan 16 09:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 11:32:44] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 09:59 run_atlas
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc       105 Jan 16 09:59 job.xml
[2026-01-16 11:32:44] -rw-r--r-- 2 boinc boinc 592330740 Jan 16 09:59 EVNT.32794306._001740.pool.root.1
[2026-01-16 11:32:44] -rw-r--r-- 2 boinc boinc     15847 Jan 16 09:59 start_atlas.sh
[2026-01-16 11:32:44] drwxrwx--x 2 boinc boinc      4096 Jan 16 09:59 shared
[2026-01-16 11:32:44] -rw-r--r-- 2 boinc boinc    592402 Jan 16 09:59 input.tar.gz
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc         0 Jan 16 09:59 boinc_setup_complete
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 09:59 init_data.xml
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc         0 Jan 16 09:59 boinc_lockfile
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc      2509 Jan 16 09:59 pandaJob.out
[2026-01-16 11:32:44] -rw------- 1 boinc boinc   1004067 Jan 16 10:00 agis_schedconf.cvmfs.json
[2026-01-16 11:32:44] -rw------- 1 boinc boinc   1516246 Jan 16 10:00 agis_ddmendpoints.agis.ALL.json
[2026-01-16 11:32:44] drwx------ 5 boinc boinc      4096 Jan 16 10:00 pilot3
[2026-01-16 11:32:44] -rw------- 1 boinc boinc 152753854 Jan 16 11:30 HITS.48215263._044702.pool.root.1
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc       531 Jan 16 11:30 boinc_task_state.xml
[2026-01-16 11:32:44] -rw------- 1 boinc boinc      1020 Jan 16 11:31 memory_monitor_summary.json
[2026-01-16 11:32:44] -rw------- 1 boinc boinc    401497 Jan 16 11:31 log.48215263._044702.job.log.tgz.1
[2026-01-16 11:32:44] -rw------- 1 boinc boinc        95 Jan 16 11:31 pilot_heartbeat.json
[2026-01-16 11:32:44] -rw------- 1 boinc boinc      7729 Jan 16 11:31 heartbeat.json
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 11:32 boinc_mmap_file
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc        27 Jan 16 11:32 wrapper_checkpoint.txt
[2026-01-16 11:32:44] -rw------- 1 boinc boinc      4920 Jan 16 11:32 pilotlog.txt
[2026-01-16 11:32:44] -rw------- 1 boinc boinc    763725 Jan 16 11:32 log.48215263._044702.job.log.1
[2026-01-16 11:32:44] -rw------- 1 boinc boinc       357 Jan 16 11:32 output.list
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc       620 Jan 16 11:32 runtime_log
[2026-01-16 11:32:44] -rw------- 1 boinc boinc   1187840 Jan 16 11:32 result.tar.gz
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 11:32 runtime_log.err
[2026-01-16 11:32:44] -rw------- 1 boinc boinc       652 Jan 16 11:32 Ac9LDmrXU08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmU2nKDmQFsOem.diag
[2026-01-16 11:32:44] -rw-rw-r-- 1 boinc boinc     22131 Jan 16 11:32 stderr.txt
[2026-01-16 11:32:44] HITS file was successfully produced:
[2026-01-16 11:32:44] -rw------- 1 boinc boinc 152753854 Jan 16 11:30 shared/HITS.pool.root.1
[2026-01-16 11:32:44]  *** Contents of shared directory: ***
[2026-01-16 11:32:44] total 729388
[2026-01-16 11:32:44] -rw-r--r-- 2 boinc boinc 592330740 Jan 16 09:59 ATLAS.root_0
[2026-01-16 11:32:44] -rw-r--r-- 2 boinc boinc     15847 Jan 16 09:59 start_atlas.sh
[2026-01-16 11:32:44] -rw-r--r-- 2 boinc boinc    592402 Jan 16 09:59 input.tar.gz
[2026-01-16 11:32:44] -rw------- 1 boinc boinc 152753854 Jan 16 11:30 HITS.pool.root.1
[2026-01-16 11:32:44] -rw------- 1 boinc boinc   1187840 Jan 16 11:32 result.tar.gz
11:32:45 (3780092): run_atlas exited; CPU time 30299.642992
11:32:45 (3780092): called boinc_finish(0)

</stderr_txt>
]]>

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