Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:06:55 (8756): wrapper (7.7.26015): starting
03:06:55 (8756): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 03:06:55] Arguments: --nthreads 8
[2026-01-15 03:06:55] Threads: 8
[2026-01-15 03:06:55] Checking for CVMFS
[2026-01-15 03:06:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 03:06:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 03:06:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 03:06:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 03:06:56] 2.11.2.0 28294 189435 135176 155160 2 188 13728255 18432001 1833 130560 0 126921312 99.979 7313393 31955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 03:06:56] CVMFS is ok
[2026-01-15 03:06:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 03:06:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 03:06:56] Further information can be found at the LHC@home message board.
[2026-01-15 03:06:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 03:06:56] Checking for apptainer binary...
[2026-01-15 03:06:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 03:06:56] Running /usr/bin/apptainer --version
[2026-01-15 03:06:56] apptainer version 1.3.2-1.el7
[2026-01-15 03:06:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 03:06:56] c-206-25.aglt2.org
[2026-01-15 03:06:56] apptainer works
[2026-01-15 03:06:56] Set ATHENA_PROC_NUMBER=8
[2026-01-15 03:06:56] Set ATHENA_CORE_NUMBER=8
[2026-01-15 03:06:56] Starting ATLAS job with PandaID=6970291548
[2026-01-15 03:06:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 05:01:29]  *** The last 200 lines of the pilot log: ***
[2026-01-15 05:01:29] 2026-01-15 10:00:57,252 | INFO     | intersect: -81989491000.41704
[2026-01-15 05:01:29] 2026-01-15 10:00:57,253 | INFO     | chi2: 1.4595931757443872
[2026-01-15 05:01:29] 2026-01-15 10:00:57,253 | INFO     | current chi2=1.4595931757443872 (change=-0.10433000246338792 %)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,253 | INFO     | right removable region: 106
[2026-01-15 05:01:29] 2026-01-15 10:00:57,253 | INFO     | sum of square deviations: 379832238.0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,254 | INFO     | sum of deviations: 870392591.0000001
[2026-01-15 05:01:29] 2026-01-15 10:00:57,254 | INFO     | mean x: 1768467989.0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,254 | INFO     | mean y: 2529487.803738318
[2026-01-15 05:01:29] 2026-01-15 10:00:57,255 | INFO     | intersect: -4049947582.471349
[2026-01-15 05:01:29] 2026-01-15 10:00:57,255 | INFO     | chi2: 0.016116455707197365
[2026-01-15 05:01:29] 2026-01-15 10:00:57,255 | INFO     | current chi2=0.016116455707197365 (change=98.8946735108154 %)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,256 | INFO     | sum of square deviations: 329031285.5
[2026-01-15 05:01:29] 2026-01-15 10:00:57,256 | INFO     | sum of deviations: 845007197.0000001
[2026-01-15 05:01:29] 2026-01-15 10:00:57,257 | INFO     | mean x: 1768468141.5
[2026-01-15 05:01:29] 2026-01-15 10:00:57,257 | INFO     | mean y: 2529427.901960784
[2026-01-15 05:01:29] 2026-01-15 10:00:57,257 | INFO     | intersect: -4539191597.081588
[2026-01-15 05:01:29] 2026-01-15 10:00:57,257 | INFO     | chi2: 0.0023061473745186623
[2026-01-15 05:01:29] 2026-01-15 10:00:57,258 | INFO     | current chi2=0.0023061473745186623 (change=85.69072867870837 %)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,258 | INFO     | sum of square deviations: 282974608.0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,259 | INFO     | sum of deviations: 820094126.0000002
[2026-01-15 05:01:29] 2026-01-15 10:00:57,259 | INFO     | mean x: 1768468294.0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,259 | INFO     | mean y: 2529554.3711340204
[2026-01-15 05:01:29] 2026-01-15 10:00:57,259 | INFO     | intersect: -5122702247.086619
[2026-01-15 05:01:29] 2026-01-15 10:00:57,260 | INFO     | chi2: 0.0002194508005705296
[2026-01-15 05:01:29] 2026-01-15 10:00:57,260 | INFO     | current chi2=0.0002194508005705296 (change=90.48409468556478 %)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,260 | INFO     | sum of square deviations: 241429643.0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,261 | INFO     | sum of deviations: 560143754.5
[2026-01-15 05:01:29] 2026-01-15 10:00:57,261 | INFO     | mean x: 1768468446.5
[2026-01-15 05:01:29] 2026-01-15 10:00:57,261 | INFO     | mean y: 2530508.097826087
[2026-01-15 05:01:29] 2026-01-15 10:00:57,262 | INFO     | intersect: -4100513935.940441
[2026-01-15 05:01:29] 2026-01-15 10:00:57,262 | INFO     | chi2: 0.00013304537425577124
[2026-01-15 05:01:29] 2026-01-15 10:00:57,262 | INFO     | current chi2=0.00013304537425577124 (change=39.37348421155037 %)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,263 | INFO     | sum of square deviations: 204163828.0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,263 | INFO     | sum of deviations: 403205791.0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,263 | INFO     | mean x: 1768468599.0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,264 | INFO     | mean y: 2531147.7701149425
[2026-01-15 05:01:29] 2026-01-15 10:00:57,264 | INFO     | intersect: -3490040417.4459176
[2026-01-15 05:01:29] 2026-01-15 10:00:57,264 | INFO     | chi2: 0.00010562167606977671
[2026-01-15 05:01:29] 2026-01-15 10:00:57,264 | INFO     | current chi2=0.00010562167606977671 (change=20.612289859303353 %)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,265 | INFO     | left removable region: 50
[2026-01-15 05:01:29] 2026-01-15 10:00:57,265 | INFO     | sum of square deviations: 54438230.0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,265 | INFO     | sum of deviations: 5521719.999999999
[2026-01-15 05:01:29] 2026-01-15 10:00:57,265 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6970291548: 3809264 B (within 4404019200 B limit)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,266 | INFO     | mean x: 1768469178.5
[2026-01-15 05:01:29] 2026-01-15 10:00:57,266 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6970291548/HITS.48215263._046533.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,266 | INFO     | mean y: 2533228.964285714
[2026-01-15 05:01:29] 2026-01-15 10:00:57,266 | INFO     | total size of present files: 0 B (workdir size: 3809264 B)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,266 | INFO     | intersect: -176844234.85676464
[2026-01-15 05:01:29] 2026-01-15 10:00:57,266 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6970291548/HITS.48215263._046533.pool.root.1 since it does not exist
[2026-01-15 05:01:29] 2026-01-15 10:00:57,267 | INFO     | chi2: 5.612959113187374e-06
[2026-01-15 05:01:29] 2026-01-15 10:00:57,267 | INFO     | current memory leak: 0.10 B/s (using 56 data points, chi2=0.00)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,268 | INFO     | could have reported an average CPU frequency of 2491 MHz (7 samples)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,268 | INFO     | ..............................
[2026-01-15 05:01:29] 2026-01-15 10:00:57,268 | INFO     | . Timing measurements:
[2026-01-15 05:01:29] 2026-01-15 10:00:57,268 | INFO     | . get job = 0 s
[2026-01-15 05:01:29] 2026-01-15 10:00:57,269 | INFO     | . initial setup = 2 s
[2026-01-15 05:01:29] 2026-01-15 10:00:57,269 | INFO     | . payload setup = 4 s
[2026-01-15 05:01:29] 2026-01-15 10:00:57,269 | INFO     | . stage-in = 0 s
[2026-01-15 05:01:29] 2026-01-15 10:00:57,269 | INFO     | . payload execution = 6799 s
[2026-01-15 05:01:29] 2026-01-15 10:00:57,270 | INFO     | . stage-out = 0 s
[2026-01-15 05:01:29] 2026-01-15 10:00:57,270 | INFO     | . log creation = 0 s
[2026-01-15 05:01:29] 2026-01-15 10:00:57,270 | INFO     | ..............................
[2026-01-15 05:01:29] 2026-01-15 10:00:57,346 | INFO     | 
[2026-01-15 05:01:29] 2026-01-15 10:00:57,347 | INFO     | job summary report
[2026-01-15 05:01:29] 2026-01-15 10:00:57,347 | INFO     | --------------------------------------------------
[2026-01-15 05:01:29] 2026-01-15 10:00:57,347 | INFO     | PanDA job id: 6970291548
[2026-01-15 05:01:29] 2026-01-15 10:00:57,347 | INFO     | task id: 48215263
[2026-01-15 05:01:29] 2026-01-15 10:00:57,348 | INFO     | errors: (none)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,348 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 05:01:29] 2026-01-15 10:00:57,348 | INFO     | pilot state: finished 
[2026-01-15 05:01:29] 2026-01-15 10:00:57,348 | INFO     | transexitcode: 0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,349 | INFO     | exeerrorcode: 0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,349 | INFO     | exeerrordiag: 
[2026-01-15 05:01:29] 2026-01-15 10:00:57,349 | INFO     | exitcode: 0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,350 | INFO     | exitmsg: OK
[2026-01-15 05:01:29] 2026-01-15 10:00:57,350 | INFO     | cpuconsumptiontime: 50880 s
[2026-01-15 05:01:29] 2026-01-15 10:00:57,350 | INFO     | nevents: 400
[2026-01-15 05:01:29] 2026-01-15 10:00:57,350 | INFO     | neventsw: 0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,351 | INFO     | pid: 18934
[2026-01-15 05:01:29] 2026-01-15 10:00:57,351 | INFO     | pgrp: 18934
[2026-01-15 05:01:29] 2026-01-15 10:00:57,351 | INFO     | corecount: 8
[2026-01-15 05:01:29] 2026-01-15 10:00:57,352 | INFO     | event service: False
[2026-01-15 05:01:29] 2026-01-15 10:00:57,352 | INFO     | sizes: {0: 2283781, 1: 2283980, 4: 2284242, 12: 2284270, 6807: 2311558, 6808: 2311557, 6809: 2320739, 6812: 2320795, 6815: 2321017}
[2026-01-15 05:01:29] 2026-01-15 10:00:57,352 | INFO     | --------------------------------------------------
[2026-01-15 05:01:29] 2026-01-15 10:00:57,352 | INFO     | 
[2026-01-15 05:01:29] 2026-01-15 10:00:57,353 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 05:01:29] 2026-01-15 10:00:57,371 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,372 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,372 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,372 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,376 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,376 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 05:01:29] 2026-01-15 10:00:57,377 | INFO     | job 6970291548 has completed (purged errors)
[2026-01-15 05:01:29] 2026-01-15 10:00:57,377 | INFO     | overall cleanup function is called
[2026-01-15 05:01:29] 2026-01-15 10:00:57,480 | INFO     | number of running child processes to parent process 18934: 1
[2026-01-15 05:01:29] 2026-01-15 10:00:57,480 | INFO     | maximum number of monitored processes: 6
[2026-01-15 05:01:29] 2026-01-15 10:00:57,481 | INFO     | aborting job monitoring since job object (job id=6970291548) has expired
[2026-01-15 05:01:29] 2026-01-15 10:00:58,386 | INFO     | --- collectZombieJob: --- 10, [18934]
[2026-01-15 05:01:29] 2026-01-15 10:00:58,386 | INFO     | zombie collector waiting for pid 18934
[2026-01-15 05:01:29] 2026-01-15 10:00:58,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 05:01:29] 2026-01-15 10:00:58,387 | INFO     | collected zombie processes
[2026-01-15 05:01:29] 2026-01-15 10:00:58,387 | INFO     | will attempt to kill all subprocesses of pid=18934
[2026-01-15 05:01:29] 2026-01-15 10:00:58,548 | INFO     | process IDs to be killed: [18934] (in reverse order)
[2026-01-15 05:01:29] 2026-01-15 10:00:58,606 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 05:01:29] 2026-01-15 10:00:58,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 05:01:29] 2026-01-15 10:00:58,610 | INFO     | did not find any defunct processes belonging to 18934
[2026-01-15 05:01:29] 2026-01-15 10:00:58,612 | INFO     | did not find any defunct processes belonging to 18934
[2026-01-15 05:01:29] 2026-01-15 10:00:58,613 | INFO     | ready for new job
[2026-01-15 05:01:29] 2026-01-15 10:00:58,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 05:01:29] 2026-01-15 10:00:58,614 | INFO     | ***************************************
[2026-01-15 05:01:29] 2026-01-15 10:00:58,614 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 05:01:29] 2026-01-15 10:00:58,614 | INFO     | ***************************************
[2026-01-15 05:01:29] 2026-01-15 10:00:58,614 | INFO     | 
[2026-01-15 05:01:29] 2026-01-15 10:00:58,615 | INFO     | architecture information:
[2026-01-15 05:01:29] 2026-01-15 10:00:58,615 | INFO     | executing command: cat /etc/os-release
[2026-01-15 05:01:29] 2026-01-15 10:00:58,624 | INFO     | cat /etc/os-release:
[2026-01-15 05:01:29] NAME="CentOS Linux"
[2026-01-15 05:01:29] VERSION="7 (Core)"
[2026-01-15 05:01:29] ID="centos"
[2026-01-15 05:01:29] ID_LIKE="rhel fedora"
[2026-01-15 05:01:29] VERSION_ID="7"
[2026-01-15 05:01:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 05:01:29] ANSI_COLOR="0;31"
[2026-01-15 05:01:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 05:01:29] HOME_URL="https://www.centos.org/"
[2026-01-15 05:01:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 05:01:29] 
[2026-01-15 05:01:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 05:01:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 05:01:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 05:01:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 05:01:29] 
[2026-01-15 05:01:29] 2026-01-15 10:00:58,624 | INFO     | ***************************************
[2026-01-15 05:01:29] 2026-01-15 10:00:59,127 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 05:01:29] 2026-01-15 10:00:59,147 | INFO     | sufficient remaining disk space (26221740032 B)
[2026-01-15 05:01:29] 2026-01-15 10:00:59,148 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 05:01:29] 2026-01-15 10:00:59,148 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 05:01:29] 2026-01-15 10:00:59,148 | INFO     | update_server=False
[2026-01-15 05:01:29] 2026-01-15 10:00:59,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 05:01:29] 2026-01-15 10:00:59,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:01:29] 2026-01-15 10:00:59,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 05:01:29] 2026-01-15 10:00:59,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:01:29] 2026-01-15 10:00:59,150 | INFO     | aborting loop
[2026-01-15 05:01:29] 2026-01-15 10:00:59,634 | INFO     | all payload control threads have been joined
[2026-01-15 05:01:29] 2026-01-15 10:01:00,117 | INFO     | all data control threads have been joined
[2026-01-15 05:01:29] 2026-01-15 10:01:00,150 | INFO     | [job] retrieve thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:00,154 | INFO     | [job] queue monitor thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:00,155 | INFO     | [job] job monitor thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:00,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 05:01:29] 2026-01-15 10:01:00,304 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:00,621 | INFO     | all job control threads have been joined
[2026-01-15 05:01:29] 2026-01-15 10:01:00,640 | INFO     | [payload] control thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:00,648 | INFO     | [payload] validate_post thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:00,769 | INFO     | [data] copytool_in thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:00,866 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:01,123 | INFO     | [data] control thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:01,156 | INFO     | [data] copytool_out thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:01,303 | INFO     | [job] validate thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:01,410 | INFO     | [payload] failed_post thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:01,544 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:01,601 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:01,627 | INFO     | [job] control thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:04,180 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 05:01:29] 2026-01-15 10:01:17,632 | INFO     | [monitor] cgroup control has ended
[2026-01-15 05:01:29] 2026-01-15 10:01:17,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140012522207040)>', '<ExcThread(monitor, started 140012091856640)>']
[2026-01-15 05:01:29] 2026-01-15 10:01:22,736 | INFO     | all workflow threads have been joined
[2026-01-15 05:01:29] 2026-01-15 10:01:22,736 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 05:01:29] 2026-01-15 10:01:22,736 | INFO     | traces error code: 0
[2026-01-15 05:01:29] 2026-01-15 10:01:22,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 05:01:29] 2026-01-15 10:01:29,383 | INFO     | PID=12535 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 05:01:29] 2026-01-15 10:01:29,383 | INFO     | .. there are 3 such processes running
[2026-01-15 05:01:29] 2026-01-15 10:01:29,397 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 05:01:29] 2026-01-15 10:01:29,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 05:01:29] 2026-01-15 10:01:29,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 05:01:29] 2026-01-15 10:01:29,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 05:01:29] 2026-01-15 10:01:29,398 | INFO     | [monitor] control thread has ended
[2026-01-15 05:01:29] 2026-01-15 10:01:29,516 [wrapper] ==== pilot stdout END ====
[2026-01-15 05:01:29] 2026-01-15 10:01:29,519 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 05:01:29] 2026-01-15 10:01:29,521 [wrapper] pilotpid: 12535
[2026-01-15 05:01:29] 2026-01-15 10:01:29,524 [wrapper] Pilot exit status: 0
[2026-01-15 05:01:29] 2026-01-15 10:01:29,533 [wrapper] pandaids: 6970291548
[2026-01-15 05:01:29] 2026-01-15 10:01:29,566 [wrapper] cleanup supervisor_pilot  5978 12536
[2026-01-15 05:01:29] 2026-01-15 10:01:29,568 [wrapper] Test setup, not cleaning
[2026-01-15 05:01:29] 2026-01-15 10:01:29,570 [wrapper] apfmon messages muted
[2026-01-15 05:01:29] 2026-01-15 10:01:29,572 [wrapper] ==== wrapper stdout END ====
[2026-01-15 05:01:29] 2026-01-15 10:01:29,573 [wrapper] ==== wrapper stderr END ====
[2026-01-15 05:01:29]  *** Error codes and diagnostics ***
[2026-01-15 05:01:29]     "exeErrorCode": 0,
[2026-01-15 05:01:29]     "exeErrorDiag": "",
[2026-01-15 05:01:29]     "pilotErrorCode": 0,
[2026-01-15 05:01:29]     "pilotErrorDiag": "",
[2026-01-15 05:01:29]  *** Listing of results directory ***
[2026-01-15 05:01:29] total 735908
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 23:50 queuedata.json
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 23:50 pilot3.tar.gz
[2026-01-15 05:01:29] -rwx------ 1 boincer umatlas     36322 Jan 14 23:51 runpilot2-wrapper.sh
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas       100 Jan 15 03:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 05:01:29] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 03:06 run_atlas
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas       105 Jan 15 03:06 job.xml
[2026-01-15 05:01:29] -rw-r--r-- 2 boincer umatlas 593729126 Jan 15 03:06 EVNT.32794306._001813.pool.root.1
[2026-01-15 05:01:29] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 03:06 start_atlas.sh
[2026-01-15 05:01:29] drwxrwx--x 2 boincer umatlas      4096 Jan 15 03:06 shared
[2026-01-15 05:01:29] -rw-r--r-- 2 boincer umatlas    592404 Jan 15 03:06 input.tar.gz
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas         0 Jan 15 03:06 boinc_lockfile
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 03:06 pandaJob.out
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas        57 Jan 15 03:06 setup.sh.local
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas    999480 Jan 15 03:07 agis_schedconf.cvmfs.json
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas   1516246 Jan 15 03:07 agis_ddmendpoints.agis.ALL.json
[2026-01-15 05:01:29] drwx------ 5 boincer umatlas      4096 Jan 15 03:07 pilot3
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas      5950 Jan 15 04:55 init_data.xml
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas 153221135 Jan 15 05:00 HITS.48215263._046533.pool.root.1
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas       530 Jan 15 05:00 boinc_task_state.xml
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas      1053 Jan 15 05:00 memory_monitor_summary.json
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas    365677 Jan 15 05:00 log.48215263._046533.job.log.tgz.1
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas      7850 Jan 15 05:00 heartbeat.json
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas        27 Jan 15 05:01 wrapper_checkpoint.txt
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 05:01 boinc_mmap_file
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas        95 Jan 15 05:01 pilot_heartbeat.json
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas       820 Jan 15 05:01 pilotlog.txt
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas    980656 Jan 15 05:01 log.48215263._046533.job.log.1
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas       357 Jan 15 05:01 output.list
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas       620 Jan 15 05:01 runtime_log
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas   1361920 Jan 15 05:01 result.tar.gz
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas      9342 Jan 15 05:01 runtime_log.err
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas       657 Jan 15 05:01 rkNMDmPVU08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgwnKDm27OxVn.diag
[2026-01-15 05:01:29] -rw-r--r-- 1 boincer umatlas     21337 Jan 15 05:01 stderr.txt
[2026-01-15 05:01:29] HITS file was successfully produced:
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas 153221135 Jan 15 05:00 shared/HITS.pool.root.1
[2026-01-15 05:01:29]  *** Contents of shared directory: ***
[2026-01-15 05:01:29] total 731384
[2026-01-15 05:01:29] -rw-r--r-- 2 boincer umatlas 593729126 Jan 15 03:06 ATLAS.root_0
[2026-01-15 05:01:29] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 03:06 start_atlas.sh
[2026-01-15 05:01:29] -rw-r--r-- 2 boincer umatlas    592404 Jan 15 03:06 input.tar.gz
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas 153221135 Jan 15 05:00 HITS.pool.root.1
[2026-01-15 05:01:29] -rw------- 1 boincer umatlas   1361920 Jan 15 05:01 result.tar.gz
05:01:31 (8756): run_atlas exited; CPU time 50959.870050
05:01:31 (8756): called boinc_finish(0)

</stderr_txt>
]]>

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