Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:22:48 (491975): wrapper (7.7.26015): starting
09:22:48 (491975): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 09:22:48] Arguments: --nthreads 3
[2026-01-15 09:22:48] Threads: 3
[2026-01-15 09:22:48] Checking for CVMFS
[2026-01-15 09:22:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:22:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:22:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:22:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:22:48] 2.9.2.0 3881248 2130 81968 155161 3 56 26669149 36864000 0 130560 0 2191560 99.991 89579 3903 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 09:22:48] CVMFS is ok
[2026-01-15 09:22:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:22:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:22:48] Further information can be found at the LHC@home message board.
[2026-01-15 09:22:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:22:48] Checking for apptainer binary...
[2026-01-15 09:22:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:22:48] Running /usr/bin/apptainer --version
[2026-01-15 09:22:48] apptainer version 1.4.1-1.1
[2026-01-15 09:22:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:22:48] cosA127b
[2026-01-15 09:22:48] apptainer works
[2026-01-15 09:22:48] Set ATHENA_PROC_NUMBER=3
[2026-01-15 09:22:48] Set ATHENA_CORE_NUMBER=3
[2026-01-15 09:22:48] Starting ATLAS job with PandaID=6969628023
[2026-01-15 09:22:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:03:02]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:03:02]  is_tar=False
[2026-01-15 10:03:02]  lfn=log.47962010._003466.job.log.tgz.1
[2026-01-15 10:03:02]  mtime=0
[2026-01-15 10:03:02]  protocol_id=None
[2026-01-15 10:03:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 10:03:02]  replicas=None
[2026-01-15 10:03:02]  scope=mc16_13TeV
[2026-01-15 10:03:02]  status=None
[2026-01-15 10:03:02]  status_code=0
[2026-01-15 10:03:02]  storage_token=
[2026-01-15 10:03:02]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6969628023/log.47962010._003466.job.log.tgz.1
[2026-01-15 10:03:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/d8/d4/log.47962010._003466.job.log.tgz.1
[2026-01-15 10:03:02]  workdir=None
[2026-01-15 10:03:02] ]
[2026-01-15 10:03:02] 2026-01-15 09:01:53,593 | INFO     | transferring file log.47962010._003466.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6969628023/log.47962010._003466.job.log.tgz.1 to /local/data/boinc/
[2026-01-15 10:03:02] 2026-01-15 09:01:53,593 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6969628023/log.47962010._003466.job.log.tgz.1 /local/data/boinc/slots/0/log.47962010._0034
[2026-01-15 10:03:02] 2026-01-15 09:01:53,605 | INFO     | adding to output.list: log.47962010._003466.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/d8/d4/log.47962010._003466.job.log.tgz.
[2026-01-15 10:03:02] 2026-01-15 09:01:53,605 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 10:03:02] 2026-01-15 09:01:53,606 | INFO     | summary of transferred files:
[2026-01-15 10:03:02] 2026-01-15 09:01:53,606 | INFO     |  -- lfn=log.47962010._003466.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 10:03:02] 2026-01-15 09:01:53,606 | INFO     | stage-out finished correctly
[2026-01-15 10:03:02] 2026-01-15 09:01:53,635 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 10:03:02] 2026-01-15 09:01:53,888 | INFO     | time since job start (2339s) is within the limit (349056.0s)
[2026-01-15 10:03:02] 2026-01-15 09:01:55,018 | WARNING  | process 502139 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 10:03:02] 2026-01-15 09:01:55,018 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6969628023/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:03:02] 2026-01-15 09:01:55,054 | INFO     | number of running child processes to parent process 502139: 1
[2026-01-15 10:03:02] 2026-01-15 09:01:55,054 | INFO     | maximum number of monitored processes: 8
[2026-01-15 10:03:02] 2026-01-15 09:01:55,340 | INFO     | job 6969628023 has state=finished
[2026-01-15 10:03:02] 2026-01-15 09:01:55,340 | INFO     | preparing for final server update for job 6969628023 in state='finished'
[2026-01-15 10:03:02] 2026-01-15 09:01:55,341 | INFO     | this job has now completed (state=finished)
[2026-01-15 10:03:02] 2026-01-15 09:01:55,341 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 10:03:02] 2026-01-15 09:01:55,341 | INFO     | log transfer has been attempted: DONE
[2026-01-15 10:03:02] 2026-01-15 09:01:55,341 | INFO     | job 6969628023 has finished - writing final server update
[2026-01-15 10:03:02] 2026-01-15 09:01:55,341 | INFO     | total number of processed events: 50 (read)
[2026-01-15 10:03:02] 2026-01-15 09:01:55,342 | INFO     | executing command: lscpu
[2026-01-15 10:03:02] 2026-01-15 09:01:55,358 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:03:02] 2026-01-15 09:01:55,894 | INFO     | time since job start (2341s) is within the limit (349056.0s)
[2026-01-15 10:03:02] 2026-01-15 09:01:56,975 | INFO     | PID=495696 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 10:03:02] 2026-01-15 09:01:57,557 | INFO     | monitor loop #183: job 0:6969628023 is in state 'finished'
[2026-01-15 10:03:02] 2026-01-15 09:01:57,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:03:02] 2026-01-15 09:01:57,605 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 10:03:02] 2026-01-15 09:01:57,606 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3578.483333333333
[2026-01-15 10:03:02] 2026-01-15 09:01:57,607 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6969628023/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:03:02] 2026-01-15 09:01:57,607 | INFO     | extracted standard info from prmon json
[2026-01-15 10:03:02] 2026-01-15 09:01:57,607 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:03:02] 2026-01-15 09:01:57,607 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | sum of square deviations: 9228080.0
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | sum of deviations: 1961874863.0
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | mean x: 1768466613.0
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | mean y: 2070934.4516129033
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | intersect: -375971066933.82104
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | chi2: 0.2735926535638257
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | current memory leak: 212.60 B/s (using 31 data points, chi2=0.27)
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | could have reported an average CPU frequency of 3868 MHz (5 samples)
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | ..............................
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | . Timing measurements:
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | . get job = 0 s
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | . initial setup = 1 s
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | . payload setup = 2 s
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | . stage-in = 0 s
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | . payload execution = 2320 s
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | . stage-out = 0 s
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | . log creation = 0 s
[2026-01-15 10:03:02] 2026-01-15 09:01:57,608 | INFO     | ..............................
[2026-01-15 10:03:02] 2026-01-15 09:01:57,638 | INFO     | 
[2026-01-15 10:03:02] 2026-01-15 09:01:57,638 | INFO     | job summary report
[2026-01-15 10:03:02] 2026-01-15 09:01:57,638 | INFO     | --------------------------------------------------
[2026-01-15 10:03:02] 2026-01-15 09:01:57,638 | INFO     | PanDA job id: 6969628023
[2026-01-15 10:03:02] 2026-01-15 09:01:57,638 | INFO     | task id: 47962010
[2026-01-15 10:03:02] 2026-01-15 09:01:57,638 | INFO     | errors: (none)
[2026-01-15 10:03:02] 2026-01-15 09:01:57,638 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:03:02] 2026-01-15 09:01:57,638 | INFO     | pilot state: finished 
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | transexitcode: 0
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | exeerrorcode: 0
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | exeerrordiag: 
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | exitcode: 0
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | exitmsg: OK
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | cpuconsumptiontime: 5482 s
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | nevents: 50
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | neventsw: 0
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | pid: 502139
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | pgrp: 502139
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | corecount: 3
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | event service: False
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | sizes: {0: 2284403, 1: 2284602, 3: 2284864, 11: 2284892, 2327: 2319881, 2331: 2320103}
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | --------------------------------------------------
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | 
[2026-01-15 10:03:02] 2026-01-15 09:01:57,639 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,651 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:03:02] 2026-01-15 09:01:57,652 | INFO     | job 6969628023 has completed (purged errors)
[2026-01-15 10:03:02] 2026-01-15 09:01:57,652 | INFO     | overall cleanup function is called
[2026-01-15 10:03:02] 2026-01-15 09:01:58,660 | INFO     | --- collectZombieJob: --- 10, [502139]
[2026-01-15 10:03:02] 2026-01-15 09:01:58,660 | INFO     | zombie collector waiting for pid 502139
[2026-01-15 10:03:02] 2026-01-15 09:01:58,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:03:02] 2026-01-15 09:01:58,660 | INFO     | collected zombie processes
[2026-01-15 10:03:02] 2026-01-15 09:01:58,661 | INFO     | will attempt to kill all subprocesses of pid=502139
[2026-01-15 10:03:02] 2026-01-15 09:01:58,703 | INFO     | process IDs to be killed: [502139] (in reverse order)
[2026-01-15 10:03:02] 2026-01-15 09:01:58,726 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:03:02] 2026-01-15 09:01:58,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:03:02] 2026-01-15 09:01:58,728 | INFO     | did not find any defunct processes belonging to 502139
[2026-01-15 10:03:02] 2026-01-15 09:01:58,729 | INFO     | did not find any defunct processes belonging to 502139
[2026-01-15 10:03:02] 2026-01-15 09:01:58,729 | INFO     | ready for new job
[2026-01-15 10:03:02] 2026-01-15 09:01:58,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:03:02] 2026-01-15 09:01:58,730 | INFO     | ***************************************
[2026-01-15 10:03:02] 2026-01-15 09:01:58,730 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:03:02] 2026-01-15 09:01:58,730 | INFO     | ***************************************
[2026-01-15 10:03:02] 2026-01-15 09:01:58,730 | INFO     | 
[2026-01-15 10:03:02] 2026-01-15 09:01:58,730 | INFO     | architecture information:
[2026-01-15 10:03:02] 2026-01-15 09:01:58,730 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:03:02] 2026-01-15 09:01:58,739 | INFO     | cat /etc/os-release:
[2026-01-15 10:03:02] NAME="CentOS Linux"
[2026-01-15 10:03:02] VERSION="7 (Core)"
[2026-01-15 10:03:02] ID="centos"
[2026-01-15 10:03:02] ID_LIKE="rhel fedora"
[2026-01-15 10:03:02] VERSION_ID="7"
[2026-01-15 10:03:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:03:02] ANSI_COLOR="0;31"
[2026-01-15 10:03:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:03:02] HOME_URL="https://www.centos.org/"
[2026-01-15 10:03:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:03:02] 
[2026-01-15 10:03:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:03:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:03:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:03:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:03:02] 
[2026-01-15 10:03:02] 2026-01-15 09:01:58,739 | INFO     | ***************************************
[2026-01-15 10:03:02] 2026-01-15 09:01:59,242 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 10:03:02] 2026-01-15 09:01:59,254 | INFO     | sufficient remaining disk space (333582434304 B)
[2026-01-15 10:03:02] 2026-01-15 09:01:59,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:03:02] 2026-01-15 09:01:59,254 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:03:02] 2026-01-15 09:01:59,255 | INFO     | update_server=False
[2026-01-15 10:03:02] 2026-01-15 09:01:59,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:03:02] 2026-01-15 09:01:59,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:03:02] 2026-01-15 09:01:59,255 | INFO     | aborting loop
[2026-01-15 10:03:02] 2026-01-15 09:01:59,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:03:02] 2026-01-15 09:01:59,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:03:02] 2026-01-15 09:01:59,310 | INFO     | all job control threads have been joined
[2026-01-15 10:03:02] 2026-01-15 09:01:59,668 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:03:02] 2026-01-15 09:01:59,729 | INFO     | all data control threads have been joined
[2026-01-15 10:03:02] 2026-01-15 09:01:59,930 | INFO     | all payload control threads have been joined
[2026-01-15 10:03:02] 2026-01-15 09:02:00,255 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,257 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,260 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,316 | INFO     | [job] control thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,365 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,735 | INFO     | [data] control thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,775 | INFO     | [job] validate thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,792 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,811 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,903 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:00,936 | INFO     | [payload] control thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:01,261 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:01,645 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:01,741 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:03,675 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:09,657 | INFO     | job.realtimelogging is not enabled
[2026-01-15 10:03:02] 2026-01-15 09:02:10,662 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:03:02] 2026-01-15 09:02:29,074 | INFO     | PID=495696 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 10:03:02] 2026-01-15 09:02:29,075 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:03:02] 2026-01-15 09:02:29,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:03:02] 2026-01-15 09:02:29,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:03:02] 2026-01-15 09:02:56,535 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:03:02] 2026-01-15 09:02:57,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797759100736)>', '<ExcThread(monitor, started 139797242812160)>']
[2026-01-15 10:03:02] 2026-01-15 09:02:58,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:03:02] 2026-01-15 09:02:58,225 | INFO     | [monitor] control thread has ended
[2026-01-15 10:03:02] 2026-01-15 09:03:02,453 | INFO     | all workflow threads have been joined
[2026-01-15 10:03:02] 2026-01-15 09:03:02,453 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:03:02] 2026-01-15 09:03:02,454 | INFO     | traces error code: 0
[2026-01-15 10:03:02] 2026-01-15 09:03:02,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:03:02] 2026-01-15 09:03:02,503 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:03:02] 2026-01-15 09:03:02,506 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:03:02] 2026-01-15 09:03:02,508 [wrapper] pilotpid: 495696
[2026-01-15 10:03:02] 2026-01-15 09:03:02,510 [wrapper] Pilot exit status: 0
[2026-01-15 10:03:02] 2026-01-15 09:03:02,518 [wrapper] pandaids: 6969628023
[2026-01-15 10:03:02] 2026-01-15 09:03:02,534 [wrapper] cleanup supervisor_pilot  509023 495697
[2026-01-15 10:03:02] 2026-01-15 09:03:02,536 [wrapper] Test setup, not cleaning
[2026-01-15 10:03:02] 2026-01-15 09:03:02,539 [wrapper] apfmon messages muted
[2026-01-15 10:03:02] 2026-01-15 09:03:02,541 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:03:02] 2026-01-15 09:03:02,543 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:03:02]  *** Error codes and diagnostics ***
[2026-01-15 10:03:02]     "exeErrorCode": 0,
[2026-01-15 10:03:02]     "exeErrorDiag": "",
[2026-01-15 10:03:02]     "pilotErrorCode": 0,
[2026-01-15 10:03:02]     "pilotErrorDiag": "",
[2026-01-15 10:03:02]  *** Listing of results directory ***
[2026-01-15 10:03:02] total 430160
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc    579449 Jan 14 21:15 pilot3.tar.gz
[2026-01-15 10:03:02] -rwx------ 1 boinc boinc     36322 Jan 14 21:19 runpilot2-wrapper.sh
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc      5112 Jan 14 21:24 queuedata.json
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc       100 Jan 15 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:03:02] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 09:22 run_atlas
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc       105 Jan 15 09:22 job.xml
[2026-01-15 10:03:02] -rw-r--r-- 2 boinc boinc 391647796 Jan 15 09:22 EVNT.47962006._000113.pool.root.1
[2026-01-15 10:03:02] -rw-r--r-- 2 boinc boinc    592619 Jan 15 09:22 input.tar.gz
[2026-01-15 10:03:02] -rw-r--r-- 2 boinc boinc     15847 Jan 15 09:22 start_atlas.sh
[2026-01-15 10:03:02] drwxrwx--x 2 boinc boinc      4096 Jan 15 09:22 shared
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc         0 Jan 15 09:22 boinc_setup_complete
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc      6441 Jan 15 09:22 init_data.xml
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc         0 Jan 15 09:22 boinc_lockfile
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc      2891 Jan 15 09:22 pandaJob.out
[2026-01-15 10:03:02] -rw------- 1 boinc boinc    999472 Jan 15 09:22 agis_schedconf.cvmfs.json
[2026-01-15 10:03:02] -rw------- 1 boinc boinc   1516246 Jan 15 09:22 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:03:02] drwx------ 5 boinc boinc      4096 Jan 15 09:22 pilot3
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc       528 Jan 15 09:58 boinc_task_state.xml
[2026-01-15 10:03:02] -rw------- 1 boinc boinc  42898643 Jan 15 10:01 HITS.47962010._003466.pool.root.1
[2026-01-15 10:03:02] -rw------- 1 boinc boinc      1010 Jan 15 10:01 memory_monitor_summary.json
[2026-01-15 10:03:02] -rw------- 1 boinc boinc    624225 Jan 15 10:01 log.47962010._003466.job.log.tgz.1
[2026-01-15 10:03:02] -rw------- 1 boinc boinc      8523 Jan 15 10:01 heartbeat.json
[2026-01-15 10:03:02] -rw------- 1 boinc boinc        95 Jan 15 10:02 pilot_heartbeat.json
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc        26 Jan 15 10:02 wrapper_checkpoint.txt
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc      8192 Jan 15 10:02 boinc_mmap_file
[2026-01-15 10:03:02] -rw------- 1 boinc boinc      4823 Jan 15 10:03 pilotlog.txt
[2026-01-15 10:03:02] -rw------- 1 boinc boinc    378086 Jan 15 10:03 log.47962010._003466.job.log.1
[2026-01-15 10:03:02] -rw------- 1 boinc boinc       353 Jan 15 10:03 output.list
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc       620 Jan 15 10:03 runtime_log
[2026-01-15 10:03:02] -rw------- 1 boinc boinc   1024000 Jan 15 10:03 result.tar.gz
[2026-01-15 10:03:02] -rw------- 1 boinc boinc       659 Jan 15 10:03 taRMDmCWM08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmobmKDmgKQxWm.diag
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc      8907 Jan 15 10:03 runtime_log.err
[2026-01-15 10:03:02] -rw-r--r-- 1 boinc boinc     21711 Jan 15 10:03 stderr.txt
[2026-01-15 10:03:02] HITS file was successfully produced:
[2026-01-15 10:03:02] -rw------- 1 boinc boinc 42898643 Jan 15 10:01 shared/HITS.pool.root.1
[2026-01-15 10:03:02]  *** Contents of shared directory: ***
[2026-01-15 10:03:02] total 425968
[2026-01-15 10:03:02] -rw-r--r-- 2 boinc boinc 391647796 Jan 15 09:22 ATLAS.root_0
[2026-01-15 10:03:02] -rw-r--r-- 2 boinc boinc    592619 Jan 15 09:22 input.tar.gz
[2026-01-15 10:03:02] -rw-r--r-- 2 boinc boinc     15847 Jan 15 09:22 start_atlas.sh
[2026-01-15 10:03:02] -rw------- 1 boinc boinc  42898643 Jan 15 10:01 HITS.pool.root.1
[2026-01-15 10:03:02] -rw------- 1 boinc boinc   1024000 Jan 15 10:03 result.tar.gz
10:03:04 (491975): run_atlas exited; CPU time 5474.912503
10:03:04 (491975): called boinc_finish(0)

</stderr_txt>
]]>

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