Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:03:07 (513785): wrapper (7.7.26015): starting
10:03:07 (513785): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 10:03:07] Arguments: --nthreads 3
[2026-01-15 10:03:07] Threads: 3
[2026-01-15 10:03:07] Checking for CVMFS
[2026-01-15 10:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:03:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:03:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:03:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:03:07] 2.9.2.0 3881248 2170 85760 155161 3 130 26670353 36864000 0 130560 0 2267857 99.992 89654 3901 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 10:03:07] CVMFS is ok
[2026-01-15 10:03:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:03:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:03:07] Further information can be found at the LHC@home message board.
[2026-01-15 10:03:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:03:07] Checking for apptainer binary...
[2026-01-15 10:03:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:03:07] Running /usr/bin/apptainer --version
[2026-01-15 10:03:07] apptainer version 1.4.1-1.1
[2026-01-15 10:03:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:03:07] cosA127b
[2026-01-15 10:03:07] apptainer works
[2026-01-15 10:03:07] Set ATHENA_PROC_NUMBER=3
[2026-01-15 10:03:07] Set ATHENA_CORE_NUMBER=3
[2026-01-15 10:03:07] Starting ATLAS job with PandaID=6969846132
[2026-01-15 10:03:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:57:23]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:57:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 10:57:23]  replicas=None
[2026-01-15 10:57:23]  scope=mc23_13p6TeV
[2026-01-15 10:57:23]  status=None
[2026-01-15 10:57:23]  status_code=0
[2026-01-15 10:57:23]  storage_token=
[2026-01-15 10:57:23]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6969846132/log.48215263._038798.job.log.tgz.1
[2026-01-15 10:57:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/94/log.48215263._038798.job.log.tgz.1
[2026-01-15 10:57:23]  workdir=None
[2026-01-15 10:57:23] ]
[2026-01-15 10:57:23] 2026-01-15 09:56:15,741 | INFO     | transferring file log.48215263._038798.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6969846132/log.48215263._038798.job.log.tgz.1 to /local/data/boinc/
[2026-01-15 10:57:23] 2026-01-15 09:56:15,741 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6969846132/log.48215263._038798.job.log.tgz.1 /local/data/boinc/slots/0/log.48215263._0387
[2026-01-15 10:57:23] 2026-01-15 09:56:15,753 | INFO     | adding to output.list: log.48215263._038798.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/94/log.48215263._038798.job.log.tg
[2026-01-15 10:57:23] 2026-01-15 09:56:15,754 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 10:57:23] 2026-01-15 09:56:15,754 | INFO     | summary of transferred files:
[2026-01-15 10:57:23] 2026-01-15 09:56:15,754 | INFO     |  -- lfn=log.48215263._038798.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 10:57:23] 2026-01-15 09:56:15,754 | INFO     | stage-out finished correctly
[2026-01-15 10:57:23] 2026-01-15 09:56:16,349 | INFO     | PID=517505 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 10:57:23] 2026-01-15 09:56:17,350 | INFO     | time since job start (3184s) is within the limit (349056.0s)
[2026-01-15 10:57:23] 2026-01-15 09:56:17,877 | INFO     | monitor loop #247: job 0:6969846132 is in state 'finished'
[2026-01-15 10:57:23] 2026-01-15 09:56:17,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:57:23] 2026-01-15 09:56:18,738 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 10:57:23] 2026-01-15 09:56:19,356 | INFO     | time since job start (3186s) is within the limit (349056.0s)
[2026-01-15 10:57:23] 2026-01-15 09:56:19,510 | INFO     | job 6969846132 has state=finished
[2026-01-15 10:57:23] 2026-01-15 09:56:19,510 | INFO     | preparing for final server update for job 6969846132 in state='finished'
[2026-01-15 10:57:23] 2026-01-15 09:56:19,511 | INFO     | this job has now completed (state=finished)
[2026-01-15 10:57:23] 2026-01-15 09:56:19,511 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 10:57:23] 2026-01-15 09:56:19,511 | INFO     | log transfer has been attempted: DONE
[2026-01-15 10:57:23] 2026-01-15 09:56:19,511 | INFO     | job 6969846132 has finished - writing final server update
[2026-01-15 10:57:23] 2026-01-15 09:56:19,511 | INFO     | total number of processed events: 400 (read)
[2026-01-15 10:57:23] 2026-01-15 09:56:19,512 | INFO     | executing command: lscpu
[2026-01-15 10:57:23] 2026-01-15 09:56:19,528 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:57:23] 2026-01-15 09:56:20,381 | INFO     | monitor loop #248: job 0:6969846132 is in state 'finished'
[2026-01-15 10:57:23] 2026-01-15 09:56:20,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:57:23] 2026-01-15 09:56:21,357 | INFO     | time since job start (3188s) is within the limit (349056.0s)
[2026-01-15 10:57:23] 2026-01-15 09:56:22,884 | INFO     | monitor loop #249: job 0:6969846132 is in state 'finished'
[2026-01-15 10:57:23] 2026-01-15 09:56:22,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:57:23] 2026-01-15 09:56:23,362 | INFO     | time since job start (3190s) is within the limit (349056.0s)
[2026-01-15 10:57:23] 2026-01-15 09:56:23,756 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 10:57:23] 2026-01-15 09:56:23,757 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3599.477833333334
[2026-01-15 10:57:23] 2026-01-15 09:56:23,758 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6969846132/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:57:23] 2026-01-15 09:56:23,758 | INFO     | extracted standard info from prmon json
[2026-01-15 10:57:23] 2026-01-15 09:56:23,758 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:57:23] 2026-01-15 09:56:23,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:57:23] 2026-01-15 09:56:23,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:57:23] 2026-01-15 09:56:23,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | sum of square deviations: 28242390.0
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | sum of deviations: -2106403871.0000002
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | mean x: 1768469459.0
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | mean y: 2429373.1333333333
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | intersect: 131900293335.17325
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | chi2: 0.09245218885990925
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | current memory leak: -74.58 B/s (using 45 data points, chi2=0.09)
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | could have reported an average CPU frequency of 3841 MHz (5 samples)
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | ..............................
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | . Timing measurements:
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | . get job = 0 s
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | . initial setup = 1 s
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | . payload setup = 2 s
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | . stage-in = 0 s
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | . payload execution = 3163 s
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | . stage-out = 0 s
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | . log creation = 0 s
[2026-01-15 10:57:23] 2026-01-15 09:56:23,759 | INFO     | ..............................
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | 
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | job summary report
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | --------------------------------------------------
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | PanDA job id: 6969846132
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | task id: 48215263
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | errors: (none)
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | pilot state: finished 
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | transexitcode: 0
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | exeerrorcode: 0
[2026-01-15 10:57:23] 2026-01-15 09:56:23,790 | INFO     | exeerrordiag: 
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | exitcode: 0
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | exitmsg: OK
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | cpuconsumptiontime: 8952 s
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | nevents: 400
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | neventsw: 0
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | pid: 523948
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | pgrp: 523948
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | corecount: 3
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | event service: False
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | sizes: {0: 2283954, 2: 2284216, 10: 2284244, 3169: 2318794, 3172: 2318794, 3177: 2319020}
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | --------------------------------------------------
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | 
[2026-01-15 10:57:23] 2026-01-15 09:56:23,791 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-15 10:57:23] 2026-01-15 09:56:23,803 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,804 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:57:23] 2026-01-15 09:56:23,805 | INFO     | job 6969846132 has completed (purged errors)
[2026-01-15 10:57:23] 2026-01-15 09:56:23,805 | INFO     | overall cleanup function is called
[2026-01-15 10:57:23] 2026-01-15 09:56:24,807 | INFO     | --- collectZombieJob: --- 10, [523948]
[2026-01-15 10:57:23] 2026-01-15 09:56:24,807 | INFO     | zombie collector waiting for pid 523948
[2026-01-15 10:57:23] 2026-01-15 09:56:24,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:57:23] 2026-01-15 09:56:24,807 | INFO     | collected zombie processes
[2026-01-15 10:57:23] 2026-01-15 09:56:24,807 | INFO     | will attempt to kill all subprocesses of pid=523948
[2026-01-15 10:57:23] 2026-01-15 09:56:24,849 | INFO     | process IDs to be killed: [523948] (in reverse order)
[2026-01-15 10:57:23] 2026-01-15 09:56:24,872 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:57:23] 2026-01-15 09:56:24,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:57:23] 2026-01-15 09:56:24,873 | INFO     | did not find any defunct processes belonging to 523948
[2026-01-15 10:57:23] 2026-01-15 09:56:24,874 | INFO     | did not find any defunct processes belonging to 523948
[2026-01-15 10:57:23] 2026-01-15 09:56:24,874 | INFO     | ready for new job
[2026-01-15 10:57:23] 2026-01-15 09:56:24,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:57:23] 2026-01-15 09:56:24,875 | INFO     | ***************************************
[2026-01-15 10:57:23] 2026-01-15 09:56:24,875 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:57:23] 2026-01-15 09:56:24,875 | INFO     | ***************************************
[2026-01-15 10:57:23] 2026-01-15 09:56:24,875 | INFO     | 
[2026-01-15 10:57:23] 2026-01-15 09:56:24,875 | INFO     | architecture information:
[2026-01-15 10:57:23] 2026-01-15 09:56:24,875 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:57:23] 2026-01-15 09:56:24,884 | INFO     | cat /etc/os-release:
[2026-01-15 10:57:23] NAME="CentOS Linux"
[2026-01-15 10:57:23] VERSION="7 (Core)"
[2026-01-15 10:57:23] ID="centos"
[2026-01-15 10:57:23] ID_LIKE="rhel fedora"
[2026-01-15 10:57:23] VERSION_ID="7"
[2026-01-15 10:57:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:57:23] ANSI_COLOR="0;31"
[2026-01-15 10:57:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:57:23] HOME_URL="https://www.centos.org/"
[2026-01-15 10:57:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:57:23] 
[2026-01-15 10:57:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:57:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:57:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:57:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:57:23] 
[2026-01-15 10:57:23] 2026-01-15 09:56:24,884 | INFO     | ***************************************
[2026-01-15 10:57:23] 2026-01-15 09:56:25,387 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 10:57:23] 2026-01-15 09:56:25,400 | INFO     | sufficient remaining disk space (333065486336 B)
[2026-01-15 10:57:23] 2026-01-15 09:56:25,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:57:23] 2026-01-15 09:56:25,400 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:57:23] 2026-01-15 09:56:25,400 | INFO     | update_server=False
[2026-01-15 10:57:23] 2026-01-15 09:56:25,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:57:23] 2026-01-15 09:56:25,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:57:23] 2026-01-15 09:56:25,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:57:23] 2026-01-15 09:56:25,630 | INFO     | all data control threads have been joined
[2026-01-15 10:57:23] 2026-01-15 09:56:26,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:57:23] 2026-01-15 09:56:26,348 | INFO     | all job control threads have been joined
[2026-01-15 10:57:23] 2026-01-15 09:56:26,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:57:23] 2026-01-15 09:56:26,393 | INFO     | aborting loop
[2026-01-15 10:57:23] 2026-01-15 09:56:26,406 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:26,406 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:26,506 | INFO     | all payload control threads have been joined
[2026-01-15 10:57:23] 2026-01-15 09:56:26,636 | INFO     | [data] control thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:26,895 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:27,007 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:27,073 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:27,354 | INFO     | [job] control thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:27,392 | INFO     | [job] validate thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:27,398 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:27,418 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:27,456 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:27,512 | INFO     | [payload] control thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:27,738 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:28,306 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:29,407 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:36,295 | INFO     | job.realtimelogging is not enabled
[2026-01-15 10:57:23] 2026-01-15 09:56:37,301 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:57:23] 2026-01-15 09:56:56,475 | INFO     | PID=517505 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 10:57:23] 2026-01-15 09:56:56,475 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:57:23] 2026-01-15 09:56:56,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:57:23] 2026-01-15 09:56:56,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:57:23] 2026-01-15 09:57:16,186 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:57:23] 2026-01-15 09:57:18,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168285812544)>', '<ExcThread(monitor, started 140167130117888)>']
[2026-01-15 10:57:23] 2026-01-15 09:57:18,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:57:23] 2026-01-15 09:57:18,592 | INFO     | [monitor] control thread has ended
[2026-01-15 10:57:23] 2026-01-15 09:57:23,143 | INFO     | all workflow threads have been joined
[2026-01-15 10:57:23] 2026-01-15 09:57:23,143 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:57:23] 2026-01-15 09:57:23,143 | INFO     | traces error code: 0
[2026-01-15 10:57:23] 2026-01-15 09:57:23,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:57:23] 2026-01-15 09:57:23,196 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:57:23] 2026-01-15 09:57:23,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:57:23] 2026-01-15 09:57:23,201 [wrapper] pilotpid: 517505
[2026-01-15 10:57:23] 2026-01-15 09:57:23,203 [wrapper] Pilot exit status: 0
[2026-01-15 10:57:23] 2026-01-15 09:57:23,210 [wrapper] pandaids: 6969846132
[2026-01-15 10:57:23] 2026-01-15 09:57:23,226 [wrapper] cleanup supervisor_pilot  533089 517506
[2026-01-15 10:57:23] 2026-01-15 09:57:23,229 [wrapper] Test setup, not cleaning
[2026-01-15 10:57:23] 2026-01-15 09:57:23,231 [wrapper] apfmon messages muted
[2026-01-15 10:57:23] 2026-01-15 09:57:23,233 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:57:23] 2026-01-15 09:57:23,235 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:57:23]  *** Error codes and diagnostics ***
[2026-01-15 10:57:23]     "exeErrorCode": 0,
[2026-01-15 10:57:23]     "exeErrorDiag": "",
[2026-01-15 10:57:23]     "pilotErrorCode": 0,
[2026-01-15 10:57:23]     "pilotErrorDiag": "",
[2026-01-15 10:57:23]  *** Listing of results directory ***
[2026-01-15 10:57:23] total 734584
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc    579449 Jan 15 00:30 pilot3.tar.gz
[2026-01-15 10:57:23] -rwx------ 1 boinc boinc     36322 Jan 15 00:32 runpilot2-wrapper.sh
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc      5112 Jan 15 00:35 queuedata.json
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc       100 Jan 15 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:57:23] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 10:03 run_atlas
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc       105 Jan 15 10:03 job.xml
[2026-01-15 10:57:23] -rw-r--r-- 2 boinc boinc 599399773 Jan 15 10:03 EVNT.32794306._001548.pool.root.1
[2026-01-15 10:57:23] -rw-r--r-- 2 boinc boinc    592404 Jan 15 10:03 input.tar.gz
[2026-01-15 10:57:23] -rw-r--r-- 2 boinc boinc     15847 Jan 15 10:03 start_atlas.sh
[2026-01-15 10:57:23] drwxrwx--x 2 boinc boinc      4096 Jan 15 10:03 shared
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc         0 Jan 15 10:03 boinc_setup_complete
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc      6441 Jan 15 10:03 init_data.xml
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc         0 Jan 15 10:03 boinc_lockfile
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc      2508 Jan 15 10:03 pandaJob.out
[2026-01-15 10:57:23] -rw------- 1 boinc boinc    999472 Jan 15 10:03 agis_schedconf.cvmfs.json
[2026-01-15 10:57:23] -rw------- 1 boinc boinc   1516246 Jan 15 10:03 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:57:23] drwx------ 5 boinc boinc      4096 Jan 15 10:03 pilot3
[2026-01-15 10:57:23] -rw------- 1 boinc boinc 147432259 Jan 15 10:55 HITS.48215263._038798.pool.root.1
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc       529 Jan 15 10:56 boinc_task_state.xml
[2026-01-15 10:57:23] -rw------- 1 boinc boinc      1034 Jan 15 10:56 memory_monitor_summary.json
[2026-01-15 10:57:23] -rw------- 1 boinc boinc    238257 Jan 15 10:56 log.48215263._038798.job.log.tgz.1
[2026-01-15 10:57:23] -rw------- 1 boinc boinc      7758 Jan 15 10:56 heartbeat.json
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc      8192 Jan 15 10:56 boinc_mmap_file
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc        26 Jan 15 10:56 wrapper_checkpoint.txt
[2026-01-15 10:57:23] -rw------- 1 boinc boinc        95 Jan 15 10:56 pilot_heartbeat.json
[2026-01-15 10:57:23] -rw------- 1 boinc boinc      4823 Jan 15 10:57 pilotlog.txt
[2026-01-15 10:57:23] -rw------- 1 boinc boinc    487025 Jan 15 10:57 log.48215263._038798.job.log.1
[2026-01-15 10:57:23] -rw------- 1 boinc boinc       357 Jan 15 10:57 output.list
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc       620 Jan 15 10:57 runtime_log
[2026-01-15 10:57:23] -rw------- 1 boinc boinc    747520 Jan 15 10:57 result.tar.gz
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc      8907 Jan 15 10:57 runtime_log.err
[2026-01-15 10:57:23] -rw------- 1 boinc boinc       658 Jan 15 10:57 hDSKDmVWP08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmE4mKDmvgHARm.diag
[2026-01-15 10:57:23] -rw-r--r-- 1 boinc boinc     21995 Jan 15 10:57 stderr.txt
[2026-01-15 10:57:23] HITS file was successfully produced:
[2026-01-15 10:57:23] -rw------- 1 boinc boinc 147432259 Jan 15 10:55 shared/HITS.pool.root.1
[2026-01-15 10:57:23]  *** Contents of shared directory: ***
[2026-01-15 10:57:23] total 730668
[2026-01-15 10:57:23] -rw-r--r-- 2 boinc boinc 599399773 Jan 15 10:03 ATLAS.root_0
[2026-01-15 10:57:23] -rw-r--r-- 2 boinc boinc    592404 Jan 15 10:03 input.tar.gz
[2026-01-15 10:57:23] -rw-r--r-- 2 boinc boinc     15847 Jan 15 10:03 start_atlas.sh
[2026-01-15 10:57:23] -rw------- 1 boinc boinc 147432259 Jan 15 10:55 HITS.pool.root.1
[2026-01-15 10:57:23] -rw------- 1 boinc boinc    747520 Jan 15 10:57 result.tar.gz
10:57:24 (513785): run_atlas exited; CPU time 8961.991007
10:57:24 (513785): called boinc_finish(0)

</stderr_txt>
]]>

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