Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:06:37 (3710104): wrapper (7.7.26015): starting
09:06:37 (3710104): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 09:06:37] Arguments: --nthreads 3
[2026-01-15 09:06:37] Threads: 3
[2026-01-15 09:06:37] Checking for CVMFS
[2026-01-15 09:06:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:06:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:06:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:06:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:06:37] 2.9.2.0 2866369 2125 80860 155160 2 133 23907154 36864000 0 130560 0 2299854 99.992 86874 3322 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 09:06:37] CVMFS is ok
[2026-01-15 09:06:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:06:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:06:37] Further information can be found at the LHC@home message board.
[2026-01-15 09:06:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:06:37] Checking for apptainer binary...
[2026-01-15 09:06:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:06:37] Running /usr/bin/apptainer --version
[2026-01-15 09:06:37] apptainer version 1.4.1-1.1
[2026-01-15 09:06:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:06:37] magicA161a
[2026-01-15 09:06:37] apptainer works
[2026-01-15 09:06:37] Set ATHENA_PROC_NUMBER=3
[2026-01-15 09:06:37] Set ATHENA_CORE_NUMBER=3
[2026-01-15 09:06:37] Starting ATLAS job with PandaID=6969819986
[2026-01-15 09:06:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:02:53]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:02:53] 2026-01-15 09:01:51,991 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:02:53] 2026-01-15 09:01:51,991 | INFO     | update_server=False
[2026-01-15 10:02:53] 2026-01-15 09:01:51,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:02:53] 2026-01-15 09:01:51,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:02:53] 2026-01-15 09:01:51,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:02:53] 2026-01-15 09:01:51,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:02:53] 2026-01-15 09:01:52,089 | INFO     | all job control threads have been joined
[2026-01-15 10:02:53] 2026-01-15 09:01:52,099 | INFO     | all payload control threads have been joined
[2026-01-15 10:02:53] 2026-01-15 09:01:52,379 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 10:02:53] 2026-01-15 09:01:52,379 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 10:02:53] 2026-01-15 09:01:52,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:02:53] 2026-01-15 09:01:52,379 | INFO     | will abort loop
[2026-01-15 10:02:53] 2026-01-15 09:01:52,475 | INFO     | all data control threads have been joined
[2026-01-15 10:02:53] 2026-01-15 09:01:52,996 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:52,997 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:53,013 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:53,095 | INFO     | [job] control thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:53,104 | INFO     | [payload] control thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:53,385 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:53,481 | INFO     | [data] control thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:53,800 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:53,878 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:53,997 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:54,020 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:54,438 | INFO     | [job] validate thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:54,496 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:54,574 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:01:55,998 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:02:02,465 | INFO     | job.realtimelogging is not enabled
[2026-01-15 10:02:53] 2026-01-15 09:02:03,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:02:53] 2026-01-15 09:02:22,761 | INFO     | PID=3713829 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:02:53] 2026-01-15 09:02:22,761 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:02:53] 2026-01-15 09:02:22,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:02:53] 2026-01-15 09:02:22,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:02:53] 2026-01-15 09:02:46,817 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:02:53] 2026-01-15 09:02:47,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526968866624)>', '<ExcThread(monitor, started 140526347081472)>']
[2026-01-15 10:02:53] 2026-01-15 09:02:48,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:02:53] 2026-01-15 09:02:48,892 | INFO     | [monitor] control thread has ended
[2026-01-15 10:02:53] 2026-01-15 09:02:53,020 | INFO     | all workflow threads have been joined
[2026-01-15 10:02:53] 2026-01-15 09:02:53,020 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:02:53] 2026-01-15 09:02:53,021 | INFO     | traces error code: 0
[2026-01-15 10:02:53] 2026-01-15 09:02:53,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:02:53] 2026-01-15 09:02:53,070 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:02:53] 2026-01-15 09:02:53,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:02:53] 2026-01-15 09:02:53,075 [wrapper] pilotpid: 3713829
[2026-01-15 10:02:53] 2026-01-15 09:02:53,078 [wrapper] Pilot exit status: 0
[2026-01-15 10:02:53] 2026-01-15 09:02:53,085 [wrapper] pandaids: 6969819986
[2026-01-15 10:02:53] 2026-01-15 09:02:53,101 [wrapper] cleanup supervisor_pilot 3729428 3713830
[2026-01-15 10:02:53] 2026-01-15 09:02:53,103 [wrapper] Test setup, not cleaning
[2026-01-15 10:02:53] 2026-01-15 09:02:53,106 [wrapper] apfmon messages muted
[2026-01-15 10:02:53] 2026-01-15 09:02:53,108 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:02:53] 2026-01-15 09:02:53,110 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:02:53]  *** Error codes and diagnostics ***
[2026-01-15 10:02:53]     "exeErrorCode": 0,
[2026-01-15 10:02:53]     "exeErrorDiag": "",
[2026-01-15 10:02:53]     "pilotErrorCode": 0,
[2026-01-15 10:02:53]     "pilotErrorDiag": "",
[2026-01-15 10:02:53]  *** Listing of results directory ***
[2026-01-15 10:02:53] total 736128
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc    579449 Jan 15 00:30 pilot3.tar.gz
[2026-01-15 10:02:53] -rwx------ 1 boinc boinc     36322 Jan 15 00:34 runpilot2-wrapper.sh
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc      5112 Jan 15 00:35 queuedata.json
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc       100 Jan 15 09:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:02:53] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 09:06 run_atlas
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc       105 Jan 15 09:06 job.xml
[2026-01-15 10:02:53] -rw-r--r-- 2 boinc boinc 593272243 Jan 15 09:06 EVNT.32794306._001502.pool.root.1
[2026-01-15 10:02:53] -rw-r--r-- 2 boinc boinc    592405 Jan 15 09:06 input.tar.gz
[2026-01-15 10:02:53] -rw-r--r-- 2 boinc boinc     15847 Jan 15 09:06 start_atlas.sh
[2026-01-15 10:02:53] drwxrwx--x 2 boinc boinc      4096 Jan 15 09:06 shared
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc         0 Jan 15 09:06 boinc_setup_complete
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc      6448 Jan 15 09:06 init_data.xml
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc         0 Jan 15 09:06 boinc_lockfile
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc      2509 Jan 15 09:06 pandaJob.out
[2026-01-15 10:02:53] -rw------- 1 boinc boinc    999480 Jan 15 09:06 agis_schedconf.cvmfs.json
[2026-01-15 10:02:53] -rw------- 1 boinc boinc   1516246 Jan 15 09:06 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:02:53] drwx------ 5 boinc boinc      4096 Jan 15 09:06 pilot3
[2026-01-15 10:02:53] -rw------- 1 boinc boinc 155139876 Jan 15 10:01 HITS.48215263._037635.pool.root.1
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc       529 Jan 15 10:01 boinc_task_state.xml
[2026-01-15 10:02:53] -rw------- 1 boinc boinc      1011 Jan 15 10:01 memory_monitor_summary.json
[2026-01-15 10:02:53] -rw------- 1 boinc boinc    234258 Jan 15 10:01 log.48215263._037635.job.log.tgz.1
[2026-01-15 10:02:53] -rw------- 1 boinc boinc      7742 Jan 15 10:01 heartbeat.json
[2026-01-15 10:02:53] -rw------- 1 boinc boinc        95 Jan 15 10:02 pilot_heartbeat.json
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc      8192 Jan 15 10:02 boinc_mmap_file
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc        26 Jan 15 10:02 wrapper_checkpoint.txt
[2026-01-15 10:02:53] -rw------- 1 boinc boinc      5010 Jan 15 10:02 pilotlog.txt
[2026-01-15 10:02:53] -rw------- 1 boinc boinc    502775 Jan 15 10:02 log.48215263._037635.job.log.1
[2026-01-15 10:02:53] -rw------- 1 boinc boinc       357 Jan 15 10:02 output.list
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc       620 Jan 15 10:02 runtime_log
[2026-01-15 10:02:53] -rw------- 1 boinc boinc    757760 Jan 15 10:02 result.tar.gz
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc      8917 Jan 15 10:02 runtime_log.err
[2026-01-15 10:02:53] -rw------- 1 boinc boinc       660 Jan 15 10:02 gtYKDmRYP08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm98mKDmNrFZAo.diag
[2026-01-15 10:02:53] -rw-r--r-- 1 boinc boinc      7846 Jan 15 10:02 stderr.txt
[2026-01-15 10:02:53] HITS file was successfully produced:
[2026-01-15 10:02:53] -rw------- 1 boinc boinc 155139876 Jan 15 10:01 shared/HITS.pool.root.1
[2026-01-15 10:02:53]  *** Contents of shared directory: ***
[2026-01-15 10:02:53] total 732216
[2026-01-15 10:02:53] -rw-r--r-- 2 boinc boinc 593272243 Jan 15 09:06 ATLAS.root_0
[2026-01-15 10:02:53] -rw-r--r-- 2 boinc boinc    592405 Jan 15 09:06 input.tar.gz
[2026-01-15 10:02:53] -rw-r--r-- 2 boinc boinc     15847 Jan 15 09:06 start_atlas.sh
[2026-01-15 10:02:53] -rw------- 1 boinc boinc 155139876 Jan 15 10:01 HITS.pool.root.1
[2026-01-15 10:02:53] -rw------- 1 boinc boinc    757760 Jan 15 10:02 result.tar.gz
10:02:54 (3710104): run_atlas exited; CPU time 9250.026208
10:02:54 (3710104): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN