Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:27:29 (10317): wrapper (7.7.26015): starting
02:27:29 (10317): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 02:27:29] Arguments: --nthreads 8
[2026-01-15 02:27:29] Threads: 8
[2026-01-15 02:27:29] Checking for CVMFS
[2026-01-15 02:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 02:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 02:27:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 02:27:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 02:27:29] 2.11.2.0 2913 119119 113944 155160 2 58 20202489 20275200 1 130560 0 24840270 99.745 8408055 32476 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 02:27:29] CVMFS is ok
[2026-01-15 02:27:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 02:27:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 02:27:29] Further information can be found at the LHC@home message board.
[2026-01-15 02:27:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 02:27:29] Checking for apptainer binary...
[2026-01-15 02:27:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 02:27:29] Running /usr/bin/apptainer --version
[2026-01-15 02:27:29] apptainer version 1.3.2-1.el7
[2026-01-15 02:27:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 02:27:31] c-204-29.aglt2.org
[2026-01-15 02:27:31] apptainer works
[2026-01-15 02:27:31] Set ATHENA_PROC_NUMBER=8
[2026-01-15 02:27:31] Set ATHENA_CORE_NUMBER=8
[2026-01-15 02:27:31] Starting ATLAS job with PandaID=6969982045
[2026-01-15 02:27:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 03:48:02]  *** The last 200 lines of the pilot log: ***
[2026-01-15 03:48:02]  protocol_id=None
[2026-01-15 03:48:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 03:48:02]  replicas=None
[2026-01-15 03:48:02]  scope=mc23_13p6TeV
[2026-01-15 03:48:02]  status=None
[2026-01-15 03:48:02]  status_code=0
[2026-01-15 03:48:02]  storage_token=
[2026-01-15 03:48:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969982045/log.48215263._039214.job.log.tgz.1
[2026-01-15 03:48:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/b8/log.48215263._039214.job.log.tgz.1
[2026-01-15 03:48:02]  workdir=None
[2026-01-15 03:48:02] ]
[2026-01-15 03:48:02] 2026-01-15 08:47:08,991 | INFO     | transferring file log.48215263._039214.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969982045/log.48215263._039214.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 03:48:02] 2026-01-15 08:47:08,991 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969982045/log.48215263._039214.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._039214.job
[2026-01-15 03:48:02] 2026-01-15 08:47:09,017 | INFO     | adding to output.list: log.48215263._039214.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/b8/log.48215263._039214.job.log.tg
[2026-01-15 03:48:02] 2026-01-15 08:47:09,018 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 03:48:02] 2026-01-15 08:47:09,019 | INFO     | summary of transferred files:
[2026-01-15 03:48:02] 2026-01-15 08:47:09,019 | INFO     |  -- lfn=log.48215263._039214.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 03:48:02] 2026-01-15 08:47:09,019 | INFO     | stage-out finished correctly
[2026-01-15 03:48:02] 2026-01-15 08:47:09,698 | INFO     | monitor loop #356: job 0:6969982045 is in state 'finished'
[2026-01-15 03:48:02] 2026-01-15 08:47:09,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 03:48:02] 2026-01-15 08:47:09,753 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 03:48:02] 2026-01-15 08:47:09,839 | INFO     | job 6969982045 has state=finished
[2026-01-15 03:48:02] 2026-01-15 08:47:09,839 | INFO     | preparing for final server update for job 6969982045 in state='finished'
[2026-01-15 03:48:02] 2026-01-15 08:47:09,840 | INFO     | this job has now completed (state=finished)
[2026-01-15 03:48:02] 2026-01-15 08:47:09,840 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 03:48:02] 2026-01-15 08:47:09,841 | INFO     | log transfer has been attempted: DONE
[2026-01-15 03:48:02] 2026-01-15 08:47:09,841 | INFO     | job 6969982045 has finished - writing final server update
[2026-01-15 03:48:02] 2026-01-15 08:47:09,841 | INFO     | total number of processed events: 400 (read)
[2026-01-15 03:48:02] 2026-01-15 08:47:09,842 | INFO     | executing command: lscpu
[2026-01-15 03:48:02] 2026-01-15 08:47:09,869 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 03:48:02] 2026-01-15 08:47:10,478 | INFO     | time since job start (4761s) is within the limit (349056.0s)
[2026-01-15 03:48:02] 2026-01-15 08:47:12,201 | INFO     | monitor loop #357: job 0:6969982045 is in state 'finished'
[2026-01-15 03:48:02] 2026-01-15 08:47:12,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 03:48:02] 2026-01-15 08:47:12,484 | INFO     | time since job start (4763s) is within the limit (349056.0s)
[2026-01-15 03:48:02] 2026-01-15 08:47:14,490 | INFO     | time since job start (4765s) is within the limit (349056.0s)
[2026-01-15 03:48:02] 2026-01-15 08:47:14,711 | INFO     | monitor loop #358: job 0:6969982045 is in state 'finished'
[2026-01-15 03:48:02] 2026-01-15 08:47:14,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 03:48:02] 2026-01-15 08:47:16,496 | INFO     | time since job start (4767s) is within the limit (349056.0s)
[2026-01-15 03:48:02] 2026-01-15 08:47:17,108 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 03:48:02] 2026-01-15 08:47:17,112 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2026-01-15 03:48:02] 2026-01-15 08:47:17,114 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969982045/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 03:48:02] 2026-01-15 08:47:17,115 | INFO     | extracted standard info from prmon json
[2026-01-15 03:48:02] 2026-01-15 08:47:17,115 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 03:48:02] 2026-01-15 08:47:17,115 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 03:48:02] 2026-01-15 08:47:17,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 03:48:02] 2026-01-15 08:47:17,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 03:48:02] 2026-01-15 08:47:17,118 | INFO     | fitting pss+swap vs Time
[2026-01-15 03:48:02] 2026-01-15 08:47:17,118 | INFO     | sum of square deviations: 110960220.0
[2026-01-15 03:48:02] 2026-01-15 08:47:17,119 | INFO     | sum of deviations: -9073324708.0
[2026-01-15 03:48:02] 2026-01-15 08:47:17,119 | INFO     | mean x: 1768464541.0
[2026-01-15 03:48:02] 2026-01-15 08:47:17,119 | INFO     | mean y: 2720042.591549296
[2026-01-15 03:48:02] 2026-01-15 08:47:17,119 | INFO     | intersect: 144611779172.7661
[2026-01-15 03:48:02] 2026-01-15 08:47:17,119 | INFO     | chi2: 0.09049715076751028
[2026-01-15 03:48:02] 2026-01-15 08:47:17,119 | INFO     | current memory leak: -81.77 B/s (using 71 data points, chi2=0.09)
[2026-01-15 03:48:02] 2026-01-15 08:47:17,120 | INFO     | could have reported an average CPU frequency of 1892 MHz (6 samples)
[2026-01-15 03:48:02] 2026-01-15 08:47:17,120 | INFO     | ..............................
[2026-01-15 03:48:02] 2026-01-15 08:47:17,120 | INFO     | . Timing measurements:
[2026-01-15 03:48:02] 2026-01-15 08:47:17,120 | INFO     | . get job = 0 s
[2026-01-15 03:48:02] 2026-01-15 08:47:17,120 | INFO     | . initial setup = 2 s
[2026-01-15 03:48:02] 2026-01-15 08:47:17,120 | INFO     | . payload setup = 8 s
[2026-01-15 03:48:02] 2026-01-15 08:47:17,121 | INFO     | . stage-in = 0 s
[2026-01-15 03:48:02] 2026-01-15 08:47:17,121 | INFO     | . payload execution = 4728 s
[2026-01-15 03:48:02] 2026-01-15 08:47:17,121 | INFO     | . stage-out = 0 s
[2026-01-15 03:48:02] 2026-01-15 08:47:17,121 | INFO     | . log creation = 0 s
[2026-01-15 03:48:02] 2026-01-15 08:47:17,121 | INFO     | ..............................
[2026-01-15 03:48:02] 2026-01-15 08:47:17,210 | INFO     | 
[2026-01-15 03:48:02] 2026-01-15 08:47:17,210 | INFO     | job summary report
[2026-01-15 03:48:02] 2026-01-15 08:47:17,223 | INFO     | --------------------------------------------------
[2026-01-15 03:48:02] 2026-01-15 08:47:17,224 | INFO     | PanDA job id: 6969982045
[2026-01-15 03:48:02] 2026-01-15 08:47:17,224 | INFO     | task id: 48215263
[2026-01-15 03:48:02] 2026-01-15 08:47:17,224 | INFO     | errors: (none)
[2026-01-15 03:48:02] 2026-01-15 08:47:17,224 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 03:48:02] 2026-01-15 08:47:17,224 | INFO     | pilot state: finished 
[2026-01-15 03:48:02] 2026-01-15 08:47:17,224 | INFO     | transexitcode: 0
[2026-01-15 03:48:02] 2026-01-15 08:47:17,225 | INFO     | exeerrorcode: 0
[2026-01-15 03:48:02] 2026-01-15 08:47:17,225 | INFO     | exeerrordiag: 
[2026-01-15 03:48:02] 2026-01-15 08:47:17,225 | INFO     | exitcode: 0
[2026-01-15 03:48:02] 2026-01-15 08:47:17,225 | INFO     | exitmsg: OK
[2026-01-15 03:48:02] 2026-01-15 08:47:17,225 | INFO     | cpuconsumptiontime: 34248 s
[2026-01-15 03:48:02] 2026-01-15 08:47:17,225 | INFO     | nevents: 400
[2026-01-15 03:48:02] 2026-01-15 08:47:17,225 | INFO     | neventsw: 0
[2026-01-15 03:48:02] 2026-01-15 08:47:17,225 | INFO     | pid: 20405
[2026-01-15 03:48:02] 2026-01-15 08:47:17,226 | INFO     | pgrp: 20405
[2026-01-15 03:48:02] 2026-01-15 08:47:17,226 | INFO     | corecount: 8
[2026-01-15 03:48:02] 2026-01-15 08:47:17,226 | INFO     | event service: False
[2026-01-15 03:48:02] 2026-01-15 08:47:17,226 | INFO     | sizes: {0: 2283951, 6: 2284213, 11: 2284241, 4740: 2310401, 4741: 2310400, 4742: 2319454, 4743: 2319638, 4750: 2319832}
[2026-01-15 03:48:02] 2026-01-15 08:47:17,226 | INFO     | --------------------------------------------------
[2026-01-15 03:48:02] 2026-01-15 08:47:17,226 | INFO     | 
[2026-01-15 03:48:02] 2026-01-15 08:47:17,226 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 03:48:02] 2026-01-15 08:47:17,254 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,255 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,255 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,255 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,257 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 03:48:02] 2026-01-15 08:47:17,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,258 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 03:48:02] 2026-01-15 08:47:17,258 | INFO     | job 6969982045 has completed (purged errors)
[2026-01-15 03:48:02] 2026-01-15 08:47:17,258 | INFO     | overall cleanup function is called
[2026-01-15 03:48:02] 2026-01-15 08:47:18,266 | INFO     | --- collectZombieJob: --- 10, [20405]
[2026-01-15 03:48:02] 2026-01-15 08:47:18,266 | INFO     | zombie collector waiting for pid 20405
[2026-01-15 03:48:02] 2026-01-15 08:47:18,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 03:48:02] 2026-01-15 08:47:18,267 | INFO     | collected zombie processes
[2026-01-15 03:48:02] 2026-01-15 08:47:18,267 | INFO     | will attempt to kill all subprocesses of pid=20405
[2026-01-15 03:48:02] 2026-01-15 08:47:18,363 | INFO     | process IDs to be killed: [20405] (in reverse order)
[2026-01-15 03:48:02] 2026-01-15 08:47:18,424 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 03:48:02] 2026-01-15 08:47:18,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 03:48:02] 2026-01-15 08:47:18,430 | INFO     | did not find any defunct processes belonging to 20405
[2026-01-15 03:48:02] 2026-01-15 08:47:18,434 | INFO     | did not find any defunct processes belonging to 20405
[2026-01-15 03:48:02] 2026-01-15 08:47:18,434 | INFO     | ready for new job
[2026-01-15 03:48:02] 2026-01-15 08:47:18,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 03:48:02] 2026-01-15 08:47:18,436 | INFO     | ***************************************
[2026-01-15 03:48:02] 2026-01-15 08:47:18,436 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 03:48:02] 2026-01-15 08:47:18,436 | INFO     | ***************************************
[2026-01-15 03:48:02] 2026-01-15 08:47:18,436 | INFO     | 
[2026-01-15 03:48:02] 2026-01-15 08:47:18,437 | INFO     | architecture information:
[2026-01-15 03:48:02] 2026-01-15 08:47:18,437 | INFO     | executing command: cat /etc/os-release
[2026-01-15 03:48:02] 2026-01-15 08:47:18,456 | INFO     | cat /etc/os-release:
[2026-01-15 03:48:02] NAME="CentOS Linux"
[2026-01-15 03:48:02] VERSION="7 (Core)"
[2026-01-15 03:48:02] ID="centos"
[2026-01-15 03:48:02] ID_LIKE="rhel fedora"
[2026-01-15 03:48:02] VERSION_ID="7"
[2026-01-15 03:48:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 03:48:02] ANSI_COLOR="0;31"
[2026-01-15 03:48:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 03:48:02] HOME_URL="https://www.centos.org/"
[2026-01-15 03:48:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 03:48:02] 
[2026-01-15 03:48:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 03:48:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 03:48:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 03:48:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 03:48:02] 
[2026-01-15 03:48:02] 2026-01-15 08:47:18,457 | INFO     | ***************************************
[2026-01-15 03:48:02] 2026-01-15 08:47:18,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 03:48:02] 2026-01-15 08:47:18,980 | INFO     | sufficient remaining disk space (17866686464 B)
[2026-01-15 03:48:02] 2026-01-15 08:47:18,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 03:48:02] 2026-01-15 08:47:18,981 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 03:48:02] 2026-01-15 08:47:18,981 | INFO     | update_server=False
[2026-01-15 03:48:02] 2026-01-15 08:47:18,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 03:48:02] 2026-01-15 08:47:18,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 03:48:02] 2026-01-15 08:47:18,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 03:48:02] 2026-01-15 08:47:18,983 | INFO     | aborting loop
[2026-01-15 03:48:02] 2026-01-15 08:47:19,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 03:48:02] 2026-01-15 08:47:19,819 | INFO     | all data control threads have been joined
[2026-01-15 03:48:02] 2026-01-15 08:47:19,875 | INFO     | all payload control threads have been joined
[2026-01-15 03:48:02] 2026-01-15 08:47:19,985 | INFO     | [job] queue monitor thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:19,986 | INFO     | [job] job monitor thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:19,987 | INFO     | [job] retrieve thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:20,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 03:48:02] 2026-01-15 08:47:20,368 | INFO     | all job control threads have been joined
[2026-01-15 03:48:02] 2026-01-15 08:47:20,696 | INFO     | [payload] failed_post thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:20,824 | INFO     | [data] control thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:20,881 | INFO     | [payload] control thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:21,022 | INFO     | [job] validate thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:21,043 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:21,241 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:21,253 | INFO     | [data] copytool_in thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:21,296 | INFO     | [payload] validate_post thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:21,374 | INFO     | [job] control thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:21,392 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:21,632 | INFO     | [data] copytool_out thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:24,354 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:29,373 | INFO     | job.realtimelogging is not enabled
[2026-01-15 03:48:02] 2026-01-15 08:47:30,377 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 03:48:02] 2026-01-15 08:47:49,719 | INFO     | PID=13997 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 03:48:02] 2026-01-15 08:47:49,720 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 03:48:02] 2026-01-15 08:47:49,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 03:48:02] 2026-01-15 08:47:49,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 03:48:02] 2026-01-15 08:47:56,530 | INFO     | [monitor] cgroup control has ended
[2026-01-15 03:48:02] 2026-01-15 08:47:57,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109596112704)>', '<ExcThread(monitor, started 140108896376576)>']
[2026-01-15 03:48:02] 2026-01-15 08:47:57,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 03:48:02] 2026-01-15 08:47:57,753 | INFO     | [monitor] control thread has ended
[2026-01-15 03:48:02] 2026-01-15 08:48:02,183 | INFO     | all workflow threads have been joined
[2026-01-15 03:48:02] 2026-01-15 08:48:02,183 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 03:48:02] 2026-01-15 08:48:02,191 | INFO     | traces error code: 0
[2026-01-15 03:48:02] 2026-01-15 08:48:02,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 03:48:02] 2026-01-15 08:48:02,317 [wrapper] ==== pilot stdout END ====
[2026-01-15 03:48:02] 2026-01-15 08:48:02,321 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 03:48:02] 2026-01-15 08:48:02,326 [wrapper] pilotpid: 13997
[2026-01-15 03:48:02] 2026-01-15 08:48:02,330 [wrapper] Pilot exit status: 0
[2026-01-15 03:48:02] 2026-01-15 08:48:02,349 [wrapper] pandaids: 6969982045
[2026-01-15 03:48:02] 2026-01-15 08:48:02,403 [wrapper] cleanup supervisor_pilot 23844 13998
[2026-01-15 03:48:02] 2026-01-15 08:48:02,408 [wrapper] Test setup, not cleaning
[2026-01-15 03:48:02] 2026-01-15 08:48:02,413 [wrapper] apfmon messages muted
[2026-01-15 03:48:02] 2026-01-15 08:48:02,418 [wrapper] ==== wrapper stdout END ====
[2026-01-15 03:48:02] 2026-01-15 08:48:02,423 [wrapper] ==== wrapper stderr END ====
[2026-01-15 03:48:02]  *** Error codes and diagnostics ***
[2026-01-15 03:48:02]     "exeErrorCode": 0,
[2026-01-15 03:48:02]     "exeErrorDiag": "",
[2026-01-15 03:48:02]     "pilotErrorCode": 0,
[2026-01-15 03:48:02]     "pilotErrorDiag": "",
[2026-01-15 03:48:02]  *** Listing of results directory ***
[2026-01-15 03:48:02] total 726152
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 18:30 pilot3.tar.gz
[2026-01-15 03:48:02] -rwx------ 1 boincer umatlas     36322 Jan 14 18:32 runpilot2-wrapper.sh
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 18:35 queuedata.json
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas       100 Jan 15 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 03:48:02] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 02:27 run_atlas
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas       105 Jan 15 02:27 job.xml
[2026-01-15 03:48:02] -rw-r--r-- 2 boincer umatlas 588689946 Jan 15 02:27 EVNT.32794306._001563.pool.root.1
[2026-01-15 03:48:02] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 02:27 start_atlas.sh
[2026-01-15 03:48:02] drwxrwx--x 2 boincer umatlas      4096 Jan 15 02:27 shared
[2026-01-15 03:48:02] -rw-r--r-- 2 boincer umatlas    592401 Jan 15 02:27 input.tar.gz
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas         0 Jan 15 02:27 boinc_lockfile
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas      2508 Jan 15 02:27 pandaJob.out
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas        57 Jan 15 02:27 setup.sh.local
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas    999480 Jan 15 02:27 agis_schedconf.cvmfs.json
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas   1516246 Jan 15 02:27 agis_ddmendpoints.agis.ALL.json
[2026-01-15 03:48:02] drwx------ 5 boincer umatlas      4096 Jan 15 02:27 pilot3
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas       530 Jan 15 03:46 boinc_task_state.xml
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas 148930142 Jan 15 03:46 HITS.48215263._039214.pool.root.1
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas      5910 Jan 15 03:46 init_data.xml
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas        95 Jan 15 03:46 pilot_heartbeat.json
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas      1058 Jan 15 03:47 memory_monitor_summary.json
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas    326456 Jan 15 03:47 log.48215263._039214.job.log.tgz.1
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas      7845 Jan 15 03:47 heartbeat.json
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 03:47 boinc_mmap_file
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas        27 Jan 15 03:47 wrapper_checkpoint.txt
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas      4818 Jan 15 03:48 pilotlog.txt
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas    687937 Jan 15 03:48 log.48215263._039214.job.log.1
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas       357 Jan 15 03:48 output.list
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas       620 Jan 15 03:48 runtime_log
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas   1034240 Jan 15 03:48 result.tar.gz
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas      9342 Jan 15 03:48 runtime_log.err
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas       658 Jan 15 03:48 AHBODmgWP08n9Rq4apOajLDm4fhM0noT9bVo0NGKDme5mKDmE3VuDm.diag
[2026-01-15 03:48:02] -rw-r--r-- 1 boincer umatlas     21820 Jan 15 03:48 stderr.txt
[2026-01-15 03:48:02] HITS file was successfully produced:
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas 148930142 Jan 15 03:46 shared/HITS.pool.root.1
[2026-01-15 03:48:02]  *** Contents of shared directory: ***
[2026-01-15 03:48:02] total 721952
[2026-01-15 03:48:02] -rw-r--r-- 2 boincer umatlas 588689946 Jan 15 02:27 ATLAS.root_0
[2026-01-15 03:48:02] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 02:27 start_atlas.sh
[2026-01-15 03:48:02] -rw-r--r-- 2 boincer umatlas    592401 Jan 15 02:27 input.tar.gz
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas 148930142 Jan 15 03:46 HITS.pool.root.1
[2026-01-15 03:48:02] -rw------- 1 boincer umatlas   1034240 Jan 15 03:48 result.tar.gz
03:48:04 (10317): run_atlas exited; CPU time 34221.813796
03:48:04 (10317): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN