Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:27:24 (879681): wrapper (7.7.26015): starting
02:27:24 (879681): wrapper: running run_atlas (--nthreads 10)
[2026-01-15 02:27:24] Arguments: --nthreads 10
[2026-01-15 02:27:24] Threads: 10
[2026-01-15 02:27:24] Checking for CVMFS
[2026-01-15 02:27:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 02:27:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 02:27:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 02:28:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 02:28:06] 2.13.3.0 11883 101614 385848 155160 0 464 20888683 32935936 25645 16776704 0 384874260 99.510 502338615 33848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 02:28:06] CVMFS is ok
[2026-01-15 02:28:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 02:28:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 02:28:06] Further information can be found at the LHC@home message board.
[2026-01-15 02:28:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 02:28:06] Checking for apptainer binary...
[2026-01-15 02:28:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 02:28:06] Running /usr/bin/apptainer --version
[2026-01-15 02:28:06] apptainer version 1.4.5-2.el9
[2026-01-15 02:28:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 02:28:07] c6-12-29-2.aglt2.org
[2026-01-15 02:28:07] apptainer works
[2026-01-15 02:28:07] Set ATHENA_PROC_NUMBER=10
[2026-01-15 02:28:07] Set ATHENA_CORE_NUMBER=10
[2026-01-15 02:28:07] Starting ATLAS job with PandaID=6970287834
[2026-01-15 02:28:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 04:08:55]  *** The last 200 lines of the pilot log: ***
[2026-01-15 04:08:55] 2026-01-15 09:07:29,431 | INFO     | .. there are 20 such processes running
[2026-01-15 04:08:55] 2026-01-15 09:07:30,435 | INFO     | time since job start (5931s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:31,727 | INFO     | monitor loop #373: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:31,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:32,442 | INFO     | time since job start (5933s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:34,232 | INFO     | monitor loop #374: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:34,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:34,449 | INFO     | time since job start (5935s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:36,460 | INFO     | time since job start (5937s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:36,737 | INFO     | monitor loop #375: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:36,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:38,488 | INFO     | time since job start (5939s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:39,242 | INFO     | monitor loop #376: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:39,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:40,508 | INFO     | time since job start (5941s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:41,750 | INFO     | monitor loop #377: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:41,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:42,520 | INFO     | time since job start (5943s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:44,258 | INFO     | monitor loop #378: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:44,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:44,527 | INFO     | time since job start (5945s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:46,552 | INFO     | time since job start (5947s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:46,772 | INFO     | monitor loop #379: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:46,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:48,584 | INFO     | time since job start (5949s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:49,307 | INFO     | monitor loop #380: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:49,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:50,591 | INFO     | time since job start (5951s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:51,816 | INFO     | monitor loop #381: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:51,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:53,192 | INFO     | PID=885286 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 04:08:55] 2026-01-15 09:07:53,212 | INFO     | .. there are 20 such processes running
[2026-01-15 04:08:55] 2026-01-15 09:07:54,213 | INFO     | time since job start (5955s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:54,322 | INFO     | monitor loop #382: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:54,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:56,236 | INFO     | time since job start (5957s) is within the limit (349056.0s)
[2026-01-15 04:08:55] 2026-01-15 09:07:56,820 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 04:08:55] 2026-01-15 09:07:56,828 | INFO     | monitor loop #383: job 0:6970287834 is in state 'finished'
[2026-01-15 04:08:55] 2026-01-15 09:07:56,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 04:08:55] 2026-01-15 09:07:56,847 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2603.412447916667
[2026-01-15 04:08:55] 2026-01-15 09:07:56,869 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970287834/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 04:08:55] 2026-01-15 09:07:56,870 | INFO     | extracted standard info from prmon json
[2026-01-15 04:08:55] 2026-01-15 09:07:56,870 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 04:08:55] 2026-01-15 09:07:56,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 04:08:55] 2026-01-15 09:07:56,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 04:08:55] 2026-01-15 09:07:56,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 04:08:55] 2026-01-15 09:07:56,873 | INFO     | fitting pss+swap vs Time
[2026-01-15 04:08:55] 2026-01-15 09:07:56,873 | INFO     | sum of square deviations: 218566805.55056196
[2026-01-15 04:08:55] 2026-01-15 09:07:56,874 | INFO     | sum of deviations: -5212780530.988763
[2026-01-15 04:08:55] 2026-01-15 09:07:56,874 | INFO     | mean x: 1768465178.3258426
[2026-01-15 04:08:55] 2026-01-15 09:07:56,874 | INFO     | mean y: 2675599.5168539328
[2026-01-15 04:08:55] 2026-01-15 09:07:56,874 | INFO     | intersect: 42180264406.23042
[2026-01-15 04:08:55] 2026-01-15 09:07:56,874 | INFO     | chi2: 0.0070043191270100945
[2026-01-15 04:08:55] 2026-01-15 09:07:56,874 | INFO     | current memory leak: -23.85 B/s (using 89 data points, chi2=0.01)
[2026-01-15 04:08:55] 2026-01-15 09:07:56,875 | INFO     | could have reported an average CPU frequency of 2619 MHz (7 samples)
[2026-01-15 04:08:55] 2026-01-15 09:07:56,875 | INFO     | ..............................
[2026-01-15 04:08:55] 2026-01-15 09:07:56,875 | INFO     | . Timing measurements:
[2026-01-15 04:08:55] 2026-01-15 09:07:56,875 | INFO     | . get job = 0 s
[2026-01-15 04:08:55] 2026-01-15 09:07:56,875 | INFO     | . initial setup = 3 s
[2026-01-15 04:08:55] 2026-01-15 09:07:56,875 | INFO     | . payload setup = 15 s
[2026-01-15 04:08:55] 2026-01-15 09:07:56,876 | INFO     | . stage-in = 0 s
[2026-01-15 04:08:55] 2026-01-15 09:07:56,876 | INFO     | . payload execution = 5870 s
[2026-01-15 04:08:55] 2026-01-15 09:07:56,876 | INFO     | . stage-out = 2 s
[2026-01-15 04:08:55] 2026-01-15 09:07:56,876 | INFO     | . log creation = 0 s
[2026-01-15 04:08:55] 2026-01-15 09:07:56,876 | INFO     | ..............................
[2026-01-15 04:08:55] 2026-01-15 09:07:57,543 | INFO     | 
[2026-01-15 04:08:55] 2026-01-15 09:07:57,543 | INFO     | job summary report
[2026-01-15 04:08:55] 2026-01-15 09:07:57,543 | INFO     | --------------------------------------------------
[2026-01-15 04:08:55] 2026-01-15 09:07:57,543 | INFO     | PanDA job id: 6970287834
[2026-01-15 04:08:55] 2026-01-15 09:07:57,543 | INFO     | task id: 48215263
[2026-01-15 04:08:55] 2026-01-15 09:07:57,543 | INFO     | errors: (none)
[2026-01-15 04:08:55] 2026-01-15 09:07:57,543 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | pilot state: finished 
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | transexitcode: 0
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | exeerrorcode: 0
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | exeerrordiag: 
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | exitcode: 0
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | exitmsg: OK
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | cpuconsumptiontime: 27328 s
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | nevents: 400
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | neventsw: 0
[2026-01-15 04:08:55] 2026-01-15 09:07:57,544 | INFO     | pid: 894718
[2026-01-15 04:08:55] 2026-01-15 09:07:57,545 | INFO     | pgrp: 894718
[2026-01-15 04:08:55] 2026-01-15 09:07:57,545 | INFO     | corecount: 10
[2026-01-15 04:08:55] 2026-01-15 09:07:57,545 | INFO     | event service: False
[2026-01-15 04:08:55] 2026-01-15 09:07:57,545 | INFO     | sizes: {0: 2283780, 1: 2283979, 2: 2283979, 12: 2284007, 14: 2284297, 23: 2284325, 5890: 2311098, 5891: 2311097, 5893: 2320207, 5924: 2320345}
[2026-01-15 04:08:55] 2026-01-15 09:07:57,545 | INFO     | --------------------------------------------------
[2026-01-15 04:08:55] 2026-01-15 09:07:57,545 | INFO     | 
[2026-01-15 04:08:55] 2026-01-15 09:07:57,545 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 04:08:55] 2026-01-15 09:07:57,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,626 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,626 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,626 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,627 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 04:08:55] 2026-01-15 09:07:57,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,628 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 04:08:55] 2026-01-15 09:07:57,628 | INFO     | job 6970287834 has completed (purged errors)
[2026-01-15 04:08:55] 2026-01-15 09:07:57,628 | INFO     | overall cleanup function is called
[2026-01-15 04:08:55] 2026-01-15 09:07:58,637 | INFO     | --- collectZombieJob: --- 10, [894718]
[2026-01-15 04:08:55] 2026-01-15 09:07:58,637 | INFO     | zombie collector waiting for pid 894718
[2026-01-15 04:08:55] 2026-01-15 09:07:58,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 04:08:55] 2026-01-15 09:07:58,637 | INFO     | collected zombie processes
[2026-01-15 04:08:55] 2026-01-15 09:07:58,637 | INFO     | will attempt to kill all subprocesses of pid=894718
[2026-01-15 04:08:55] 2026-01-15 09:07:59,778 | INFO     | process IDs to be killed: [894718] (in reverse order)
[2026-01-15 04:08:55] 2026-01-15 09:07:59,913 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 04:08:55] 2026-01-15 09:07:59,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 04:08:55] 2026-01-15 09:07:59,967 | INFO     | did not find any defunct processes belonging to 894718
[2026-01-15 04:08:55] 2026-01-15 09:07:59,989 | INFO     | did not find any defunct processes belonging to 894718
[2026-01-15 04:08:55] 2026-01-15 09:07:59,992 | INFO     | ready for new job
[2026-01-15 04:08:55] 2026-01-15 09:07:59,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 04:08:55] 2026-01-15 09:07:59,994 | INFO     | ***************************************
[2026-01-15 04:08:55] 2026-01-15 09:07:59,994 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 04:08:55] 2026-01-15 09:07:59,994 | INFO     | ***************************************
[2026-01-15 04:08:55] 2026-01-15 09:07:59,994 | INFO     | 
[2026-01-15 04:08:55] 2026-01-15 09:08:00,000 | INFO     | architecture information:
[2026-01-15 04:08:55] 2026-01-15 09:08:00,001 | INFO     | executing command: cat /etc/os-release
[2026-01-15 04:08:55] 2026-01-15 09:08:00,055 | INFO     | cat /etc/os-release:
[2026-01-15 04:08:55] NAME="CentOS Linux"
[2026-01-15 04:08:55] VERSION="7 (Core)"
[2026-01-15 04:08:55] ID="centos"
[2026-01-15 04:08:55] ID_LIKE="rhel fedora"
[2026-01-15 04:08:55] VERSION_ID="7"
[2026-01-15 04:08:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 04:08:55] ANSI_COLOR="0;31"
[2026-01-15 04:08:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 04:08:55] HOME_URL="https://www.centos.org/"
[2026-01-15 04:08:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 04:08:55] 
[2026-01-15 04:08:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 04:08:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 04:08:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 04:08:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 04:08:55] 
[2026-01-15 04:08:55] 2026-01-15 09:08:00,055 | INFO     | ***************************************
[2026-01-15 04:08:55] 2026-01-15 09:08:00,559 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 04:08:55] 2026-01-15 09:08:00,614 | INFO     | sufficient remaining disk space (88530223104 B)
[2026-01-15 04:08:55] 2026-01-15 09:08:00,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 04:08:55] 2026-01-15 09:08:00,615 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 04:08:55] 2026-01-15 09:08:00,615 | INFO     | update_server=False
[2026-01-15 04:08:55] 2026-01-15 09:08:00,615 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 04:08:55] 2026-01-15 09:08:00,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 04:08:55] 2026-01-15 09:08:00,615 | INFO     | aborting loop
[2026-01-15 04:08:55] 2026-01-15 09:08:01,447 | INFO     | all job control threads have been joined
[2026-01-15 04:08:55] 2026-01-15 09:08:01,616 | INFO     | all data control threads have been joined
[2026-01-15 04:08:55] 2026-01-15 09:08:01,621 | INFO     | [job] retrieve thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:01,621 | INFO     | [job] job monitor thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:01,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 04:08:55] 2026-01-15 09:08:01,732 | INFO     | [payload] validate_post thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:01,852 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:01,880 | INFO     | [data] copytool_in thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:02,123 | INFO     | all payload control threads have been joined
[2026-01-15 04:08:55] 2026-01-15 09:08:02,124 | INFO     | [payload] failed_post thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:02,304 | INFO     | [job] validate thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:02,304 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:02,453 | INFO     | [job] control thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:02,561 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 04:08:55] 2026-01-15 09:08:02,622 | INFO     | [data] control thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:02,821 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:02,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:03,130 | INFO     | [payload] control thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:03,566 | INFO     | [job] queue monitor thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:03,736 | INFO     | [data] copytool_out thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:03,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 04:08:55] 2026-01-15 09:08:07,784 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 04:08:55] 2026-01-15 09:08:30,970 | INFO     | PID=885286 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 04:08:55] 2026-01-15 09:08:30,970 | INFO     | .. there are 20 such processes running
[2026-01-15 04:08:55] 2026-01-15 09:08:30,971 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 04:08:55] 2026-01-15 09:08:30,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 04:08:55] 2026-01-15 09:08:30,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 04:08:55] 2026-01-15 09:08:48,897 | INFO     | [monitor] cgroup control has ended
[2026-01-15 04:08:55] 2026-01-15 09:08:49,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140119478466368)>', '<ExcThread(monitor, started 140118979491584)>']
[2026-01-15 04:08:55] 2026-01-15 09:08:50,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 04:08:55] 2026-01-15 09:08:50,118 | INFO     | [monitor] control thread has ended
[2026-01-15 04:08:55] 2026-01-15 09:08:54,165 | INFO     | all workflow threads have been joined
[2026-01-15 04:08:55] 2026-01-15 09:08:54,165 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 04:08:55] 2026-01-15 09:08:54,165 | INFO     | traces error code: 0
[2026-01-15 04:08:55] 2026-01-15 09:08:54,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 04:08:55] 2026-01-15 09:08:54,578 [wrapper] ==== pilot stdout END ====
[2026-01-15 04:08:55] 2026-01-15 09:08:54,611 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 04:08:55] 2026-01-15 09:08:54,632 [wrapper] pilotpid: 885286
[2026-01-15 04:08:55] 2026-01-15 09:08:54,651 [wrapper] Pilot exit status: 0
[2026-01-15 04:08:55] 2026-01-15 09:08:54,752 [wrapper] pandaids: 6970287834
[2026-01-15 04:08:55] 2026-01-15 09:08:54,994 [wrapper] cleanup supervisor_pilot 1241302 885287
[2026-01-15 04:08:55] 2026-01-15 09:08:55,009 [wrapper] Test setup, not cleaning
[2026-01-15 04:08:55] 2026-01-15 09:08:55,045 [wrapper] apfmon messages muted
[2026-01-15 04:08:55] 2026-01-15 09:08:55,073 [wrapper] ==== wrapper stdout END ====
[2026-01-15 04:08:55] 2026-01-15 09:08:55,088 [wrapper] ==== wrapper stderr END ====
[2026-01-15 04:08:55]  *** Error codes and diagnostics ***
[2026-01-15 04:08:55]     "exeErrorCode": 0,
[2026-01-15 04:08:55]     "exeErrorDiag": "",
[2026-01-15 04:08:55]     "pilotErrorCode": 0,
[2026-01-15 04:08:55]     "pilotErrorDiag": "",
[2026-01-15 04:08:55]  *** Listing of results directory ***
[2026-01-15 04:08:55] total 733280
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 22:00 pilot3.tar.gz
[2026-01-15 04:08:55] -rwx------. 1 boincer umatlas     36322 Jan 14 22:04 runpilot2-wrapper.sh
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 22:10 queuedata.json
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas       100 Jan 15 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 04:08:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 02:27 run_atlas
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas       105 Jan 15 02:27 job.xml
[2026-01-15 04:08:55] -rw-r--r--. 2 boincer umatlas 598094580 Jan 15 02:27 EVNT.32794306._001732.pool.root.1
[2026-01-15 04:08:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 02:27 start_atlas.sh
[2026-01-15 04:08:55] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 02:27 shared
[2026-01-15 04:08:55] -rw-r--r--. 2 boincer umatlas    592406 Jan 15 02:27 input.tar.gz
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas         0 Jan 15 02:27 boinc_lockfile
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 02:28 pandaJob.out
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas        57 Jan 15 02:28 setup.sh.local
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas    999480 Jan 15 02:28 agis_schedconf.cvmfs.json
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas   1516246 Jan 15 02:28 agis_ddmendpoints.agis.ALL.json
[2026-01-15 04:08:55] drwx------. 5 boincer umatlas      4096 Jan 15 02:28 pilot3
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas      6878 Jan 15 04:02 init_data.xml
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas 146552347 Jan 15 04:06 HITS.48215263._044491.pool.root.1
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas       530 Jan 15 04:06 boinc_task_state.xml
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas      1041 Jan 15 04:07 memory_monitor_summary.json
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas    361259 Jan 15 04:07 log.48215263._044491.job.log.tgz.1
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas        95 Jan 15 04:07 pilot_heartbeat.json
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas      7829 Jan 15 04:07 heartbeat.json
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 04:08 boinc_mmap_file
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas        27 Jan 15 04:08 wrapper_checkpoint.txt
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas      4823 Jan 15 04:08 pilotlog.txt
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas    789147 Jan 15 04:08 log.48215263._044491.job.log.1
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas       357 Jan 15 04:08 output.list
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas       620 Jan 15 04:08 runtime_log
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas   1167360 Jan 15 04:08 result.tar.gz
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas      9354 Jan 15 04:08 runtime_log.err
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas       653 Jan 15 04:08 9M3KDmKqS08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGqnKDmTMCsMn.diag
[2026-01-15 04:08:55] -rw-r--r--. 1 boincer umatlas     22397 Jan 15 04:08 stderr.txt
[2026-01-15 04:08:55] HITS file was successfully produced:
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas 146552347 Jan 15 04:06 shared/HITS.pool.root.1
[2026-01-15 04:08:55]  *** Contents of shared directory: ***
[2026-01-15 04:08:55] total 728944
[2026-01-15 04:08:55] -rw-r--r--. 2 boincer umatlas 598094580 Jan 15 02:27 ATLAS.root_0
[2026-01-15 04:08:55] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 02:27 start_atlas.sh
[2026-01-15 04:08:55] -rw-r--r--. 2 boincer umatlas    592406 Jan 15 02:27 input.tar.gz
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas 146552347 Jan 15 04:06 HITS.pool.root.1
[2026-01-15 04:08:55] -rw-------. 1 boincer umatlas   1167360 Jan 15 04:08 result.tar.gz
04:08:56 (879681): run_atlas exited; CPU time 27518.286988
04:08:56 (879681): called boinc_finish(0)

</stderr_txt>
]]>

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