Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:17 (744480): wrapper (7.7.26015): starting
17:39:17 (744480): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 17:39:17] Arguments: --nthreads 3
[2026-01-15 17:39:17] Threads: 3
[2026-01-15 17:39:17] Checking for CVMFS
[2026-01-15 17:39:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 17:39:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 17:39:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 17:39:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 17:39:18] 2.13.3.0 719790 77 47556 155161 1 57 15105326 15728641 0 130560 0 77057 99.996 2753 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-15 17:39:18] CVMFS is ok
[2026-01-15 17:39:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 17:39:18] Checking for apptainer binary...
[2026-01-15 17:39:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 17:39:18] Running /usr/bin/apptainer --version
[2026-01-15 17:39:18] apptainer version 1.4.5-2.el9
[2026-01-15 17:39:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 17:39:18] testio003
[2026-01-15 17:39:18] apptainer works
[2026-01-15 17:39:18] Set ATHENA_PROC_NUMBER=3
[2026-01-15 17:39:18] Set ATHENA_CORE_NUMBER=3
[2026-01-15 17:39:18] Starting ATLAS job with PandaID=6970287189
[2026-01-15 17:39:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 18:57:41]  *** The last 200 lines of the pilot log: ***
[2026-01-15 18:57:41] 2026-01-15 09:56:38,896 | INFO     | time since job start (4630s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:39,182 | INFO     | monitor loop #361: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:56:39,182 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:56:40,901 | INFO     | time since job start (4632s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:41,685 | INFO     | monitor loop #362: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:56:41,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:56:42,906 | INFO     | time since job start (4634s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:44,188 | INFO     | monitor loop #363: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:56:44,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:56:44,908 | INFO     | time since job start (4636s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:46,690 | INFO     | monitor loop #364: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:56:46,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:56:46,914 | INFO     | time since job start (4638s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:48,919 | INFO     | time since job start (4640s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:49,192 | INFO     | monitor loop #365: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:56:49,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:56:49,963 | INFO     | PID=748152 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 18:57:41] 2026-01-15 09:56:50,964 | INFO     | time since job start (4642s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:51,695 | INFO     | monitor loop #366: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:56:51,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:56:52,969 | INFO     | time since job start (4644s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:54,198 | INFO     | monitor loop #367: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:56:54,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:56:54,974 | INFO     | time since job start (4646s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:56,700 | INFO     | monitor loop #368: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:56:56,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:56:56,979 | INFO     | time since job start (4648s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:58,983 | INFO     | time since job start (4650s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:56:59,202 | INFO     | monitor loop #369: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:56:59,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:57:00,988 | INFO     | time since job start (4652s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:57:01,705 | INFO     | monitor loop #370: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:57:01,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:57:02,993 | INFO     | time since job start (4654s) is within the limit (349056.0s)
[2026-01-15 18:57:41] 2026-01-15 09:57:04,208 | INFO     | monitor loop #371: job 0:6970287189 is in state 'finished'
[2026-01-15 18:57:41] 2026-01-15 09:57:04,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 18:57:41] 2026-01-15 09:57:04,792 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 18:57:41] 2026-01-15 09:57:04,793 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3695.6032499999997
[2026-01-15 18:57:41] 2026-01-15 09:57:04,794 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6970287189/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 18:57:41] 2026-01-15 09:57:04,794 | INFO     | extracted standard info from prmon json
[2026-01-15 18:57:41] 2026-01-15 09:57:04,794 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 18:57:41] 2026-01-15 09:57:04,794 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 18:57:41] 2026-01-15 09:57:04,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 18:57:41] 2026-01-15 09:57:04,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 18:57:41] 2026-01-15 09:57:04,795 | INFO     | fitting pss+swap vs Time
[2026-01-15 18:57:41] 2026-01-15 09:57:04,795 | INFO     | sum of square deviations: 97479037.0
[2026-01-15 18:57:41] 2026-01-15 09:57:04,795 | INFO     | sum of deviations: -13047906039.0
[2026-01-15 18:57:41] 2026-01-15 09:57:04,795 | INFO     | mean x: 1768468739.5
[2026-01-15 18:57:41] 2026-01-15 09:57:04,795 | INFO     | mean y: 2549012.3235294116
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | intersect: 236718202511.28833
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | chi2: 0.12795221753365305
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | current memory leak: -133.85 B/s (using 68 data points, chi2=0.13)
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | could have reported an average CPU frequency of 3649 MHz (6 samples)
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | ..............................
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | . Timing measurements:
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | . get job = 0 s
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | . initial setup = 5 s
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | . payload setup = 4 s
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | . stage-in = 0 s
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | . payload execution = 4556 s
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | . stage-out = 0 s
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | . log creation = 0 s
[2026-01-15 18:57:41] 2026-01-15 09:57:04,796 | INFO     | ..............................
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | 
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | job summary report
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | --------------------------------------------------
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | PanDA job id: 6970287189
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | task id: 48215263
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | errors: (none)
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | pilot state: finished 
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | transexitcode: 0
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | exeerrorcode: 0
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | exeerrordiag: 
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | exitcode: 0
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | exitmsg: OK
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | cpuconsumptiontime: 12526 s
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | nevents: 400
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | neventsw: 0
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | pid: 754683
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | pgrp: 754683
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | corecount: 3
[2026-01-15 18:57:41] 2026-01-15 09:57:04,833 | INFO     | event service: False
[2026-01-15 18:57:41] 2026-01-15 09:57:04,834 | INFO     | sizes: {0: 2283123, 1: 2283979, 4: 2284241, 11: 2284269, 4564: 2310436, 4566: 2319618, 4642: 2319756}
[2026-01-15 18:57:41] 2026-01-15 09:57:04,834 | INFO     | --------------------------------------------------
[2026-01-15 18:57:41] 2026-01-15 09:57:04,834 | INFO     | 
[2026-01-15 18:57:41] 2026-01-15 09:57:04,834 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-15 18:57:41] 2026-01-15 09:57:04,845 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 18:57:41] 2026-01-15 09:57:04,846 | INFO     | job 6970287189 has completed (purged errors)
[2026-01-15 18:57:41] 2026-01-15 09:57:04,847 | INFO     | overall cleanup function is called
[2026-01-15 18:57:41] 2026-01-15 09:57:05,852 | INFO     | --- collectZombieJob: --- 10, [754683]
[2026-01-15 18:57:41] 2026-01-15 09:57:05,853 | INFO     | zombie collector waiting for pid 754683
[2026-01-15 18:57:41] 2026-01-15 09:57:05,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 18:57:41] 2026-01-15 09:57:05,853 | INFO     | collected zombie processes
[2026-01-15 18:57:41] 2026-01-15 09:57:05,853 | INFO     | will attempt to kill all subprocesses of pid=754683
[2026-01-15 18:57:41] 2026-01-15 09:57:05,885 | INFO     | process IDs to be killed: [754683] (in reverse order)
[2026-01-15 18:57:41] 2026-01-15 09:57:05,905 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 18:57:41] 2026-01-15 09:57:05,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 18:57:41] 2026-01-15 09:57:05,906 | INFO     | did not find any defunct processes belonging to 754683
[2026-01-15 18:57:41] 2026-01-15 09:57:05,907 | INFO     | did not find any defunct processes belonging to 754683
[2026-01-15 18:57:41] 2026-01-15 09:57:05,907 | INFO     | ready for new job
[2026-01-15 18:57:41] 2026-01-15 09:57:05,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 18:57:41] 2026-01-15 09:57:05,908 | INFO     | ***************************************
[2026-01-15 18:57:41] 2026-01-15 09:57:05,908 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 18:57:41] 2026-01-15 09:57:05,908 | INFO     | ***************************************
[2026-01-15 18:57:41] 2026-01-15 09:57:05,908 | INFO     | 
[2026-01-15 18:57:41] 2026-01-15 09:57:05,908 | INFO     | architecture information:
[2026-01-15 18:57:41] 2026-01-15 09:57:05,909 | INFO     | executing command: cat /etc/os-release
[2026-01-15 18:57:41] 2026-01-15 09:57:05,915 | INFO     | cat /etc/os-release:
[2026-01-15 18:57:41] NAME="CentOS Linux"
[2026-01-15 18:57:41] VERSION="7 (Core)"
[2026-01-15 18:57:41] ID="centos"
[2026-01-15 18:57:41] ID_LIKE="rhel fedora"
[2026-01-15 18:57:41] VERSION_ID="7"
[2026-01-15 18:57:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 18:57:41] ANSI_COLOR="0;31"
[2026-01-15 18:57:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 18:57:41] HOME_URL="https://www.centos.org/"
[2026-01-15 18:57:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 18:57:41] 
[2026-01-15 18:57:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 18:57:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 18:57:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 18:57:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 18:57:41] 
[2026-01-15 18:57:41] 2026-01-15 09:57:05,915 | INFO     | ***************************************
[2026-01-15 18:57:41] 2026-01-15 09:57:06,418 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-15 18:57:41] 2026-01-15 09:57:06,426 | INFO     | sufficient remaining disk space (47933554688 B)
[2026-01-15 18:57:41] 2026-01-15 09:57:06,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 18:57:41] 2026-01-15 09:57:06,426 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 18:57:41] 2026-01-15 09:57:06,426 | INFO     | update_server=False
[2026-01-15 18:57:41] 2026-01-15 09:57:06,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 18:57:41] 2026-01-15 09:57:06,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 18:57:41] 2026-01-15 09:57:06,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 18:57:41] 2026-01-15 09:57:06,711 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 18:57:41] 2026-01-15 09:57:06,711 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 18:57:41] 2026-01-15 09:57:06,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 18:57:41] 2026-01-15 09:57:06,711 | INFO     | will abort loop
[2026-01-15 18:57:41] 2026-01-15 09:57:06,992 | INFO     | all data control threads have been joined
[2026-01-15 18:57:41] 2026-01-15 09:57:07,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 18:57:41] 2026-01-15 09:57:07,386 | INFO     | all job control threads have been joined
[2026-01-15 18:57:41] 2026-01-15 09:57:07,431 | INFO     | [job] retrieve thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:07,432 | INFO     | [job] queue monitor thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:07,487 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:07,490 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:07,681 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:07,716 | INFO     | [job] job monitor thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:07,770 | INFO     | all payload control threads have been joined
[2026-01-15 18:57:41] 2026-01-15 09:57:07,997 | INFO     | [data] control thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:08,225 | INFO     | [payload] validate_post thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:08,340 | INFO     | [data] copytool_in thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:08,391 | INFO     | [job] control thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:08,646 | INFO     | [data] copytool_out thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:08,660 | INFO     | [payload] failed_post thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:08,775 | INFO     | [payload] control thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:08,775 | INFO     | [job] validate thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:11,059 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:16,541 | INFO     | job.realtimelogging is not enabled
[2026-01-15 18:57:41] 2026-01-15 09:57:17,541 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 18:57:41] 2026-01-15 09:57:35,389 | INFO     | [monitor] cgroup control has ended
[2026-01-15 18:57:41] 2026-01-15 09:57:36,091 | INFO     | PID=748152 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 18:57:41] 2026-01-15 09:57:36,091 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 18:57:41] 2026-01-15 09:57:36,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 18:57:41] 2026-01-15 09:57:36,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 18:57:41] 2026-01-15 09:57:36,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017079449408)>', '<ExcThread(monitor, started 140016713975552)>']
[2026-01-15 18:57:41] 2026-01-15 09:57:37,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 18:57:41] 2026-01-15 09:57:37,096 | INFO     | [monitor] control thread has ended
[2026-01-15 18:57:41] 2026-01-15 09:57:41,672 | INFO     | all workflow threads have been joined
[2026-01-15 18:57:41] 2026-01-15 09:57:41,672 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 18:57:41] 2026-01-15 09:57:41,673 | INFO     | traces error code: 0
[2026-01-15 18:57:41] 2026-01-15 09:57:41,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 18:57:41] 2026-01-15 09:57:41,731 [wrapper] ==== pilot stdout END ====
[2026-01-15 18:57:41] 2026-01-15 09:57:41,733 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 18:57:41] 2026-01-15 09:57:41,735 [wrapper] pilotpid: 748152
[2026-01-15 18:57:41] 2026-01-15 09:57:41,736 [wrapper] Pilot exit status: 0
[2026-01-15 18:57:41] 2026-01-15 09:57:41,742 [wrapper] pandaids: 6970287189
[2026-01-15 18:57:41] 2026-01-15 09:57:41,755 [wrapper] cleanup supervisor_pilot  766276 748153
[2026-01-15 18:57:41] 2026-01-15 09:57:41,756 [wrapper] Test setup, not cleaning
[2026-01-15 18:57:41] 2026-01-15 09:57:41,758 [wrapper] apfmon messages muted
[2026-01-15 18:57:41] 2026-01-15 09:57:41,760 [wrapper] ==== wrapper stdout END ====
[2026-01-15 18:57:41] 2026-01-15 09:57:41,761 [wrapper] ==== wrapper stderr END ====
[2026-01-15 18:57:41]  *** Error codes and diagnostics ***
[2026-01-15 18:57:41]     "exeErrorCode": 0,
[2026-01-15 18:57:41]     "exeErrorDiag": "",
[2026-01-15 18:57:41]     "pilotErrorCode": 0,
[2026-01-15 18:57:41]     "pilotErrorDiag": "",
[2026-01-15 18:57:41]  *** Listing of results directory ***
[2026-01-15 18:57:41] total 737320
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc    579449 Jan 15 12:00 pilot3.tar.gz
[2026-01-15 18:57:41] -rwx------. 1 boinc boinc     36322 Jan 15 12:04 runpilot2-wrapper.sh
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc      5112 Jan 15 12:10 queuedata.json
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc       100 Jan 15 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 18:57:41] -rwxr-xr-x. 1 boinc boinc      7986 Jan 15 17:39 run_atlas
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc       105 Jan 15 17:39 job.xml
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc      9407 Jan 15 17:39 init_data.xml
[2026-01-15 18:57:41] -rw-r--r--. 2 boinc boinc 598323134 Jan 15 17:39 EVNT.32794306._001725.pool.root.1
[2026-01-15 18:57:41] -rw-r--r--. 2 boinc boinc     15847 Jan 15 17:39 start_atlas.sh
[2026-01-15 18:57:41] drwxrwx--x. 2 boinc boinc        68 Jan 15 17:39 shared
[2026-01-15 18:57:41] -rw-r--r--. 2 boinc boinc    592408 Jan 15 17:39 input.tar.gz
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc         0 Jan 15 17:39 boinc_lockfile
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc      2508 Jan 15 17:39 pandaJob.out
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc    999472 Jan 15 17:39 agis_schedconf.cvmfs.json
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc   1516246 Jan 15 17:39 agis_ddmendpoints.agis.ALL.json
[2026-01-15 18:57:41] drwx------. 5 boinc boinc      4096 Jan 15 17:39 pilot3
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc       530 Jan 15 18:55 boinc_task_state.xml
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc 150916247 Jan 15 18:55 HITS.48215263._044333.pool.root.1
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc      1013 Jan 15 18:55 memory_monitor_summary.json
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc    256698 Jan 15 18:55 log.48215263._044333.job.log.tgz.1
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc        95 Jan 15 18:56 pilot_heartbeat.json
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc      7768 Jan 15 18:57 heartbeat.json
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc        27 Jan 15 18:57 wrapper_checkpoint.txt
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc      8192 Jan 15 18:57 boinc_mmap_file
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc      5005 Jan 15 18:57 pilotlog.txt
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc    674953 Jan 15 18:57 log.48215263._044333.job.log.1
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc       357 Jan 15 18:57 output.list
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc       620 Jan 15 18:57 runtime_log
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc    952320 Jan 15 18:57 result.tar.gz
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc      8775 Jan 15 18:57 runtime_log.err
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc       642 Jan 15 18:57 hYNMDm8pS08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaonKDm4Sybdn.diag
[2026-01-15 18:57:41] -rw-r--r--. 1 boinc boinc     22022 Jan 15 18:57 stderr.txt
[2026-01-15 18:57:41] HITS file was successfully produced:
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc 150916247 Jan 15 18:55 shared/HITS.pool.root.1
[2026-01-15 18:57:41]  *** Contents of shared directory: ***
[2026-01-15 18:57:41] total 733208
[2026-01-15 18:57:41] -rw-r--r--. 2 boinc boinc 598323134 Jan 15 17:39 ATLAS.root_0
[2026-01-15 18:57:41] -rw-r--r--. 2 boinc boinc     15847 Jan 15 17:39 start_atlas.sh
[2026-01-15 18:57:41] -rw-r--r--. 2 boinc boinc    592408 Jan 15 17:39 input.tar.gz
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc 150916247 Jan 15 18:55 HITS.pool.root.1
[2026-01-15 18:57:41] -rw-------. 1 boinc boinc    952320 Jan 15 18:57 result.tar.gz
18:57:43 (744480): run_atlas exited; CPU time 12533.004278
18:57:43 (744480): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN