Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:32:52 (1042348): wrapper (7.7.26015): starting
14:32:52 (1042348): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 14:32:52] Arguments: --nthreads 12
[2026-01-16 14:32:52] Threads: 12
[2026-01-16 14:32:52] Checking for CVMFS
[2026-01-16 14:32:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 14:32:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 14:32:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 14:32:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 14:32:53] 2.13.3.0 40677 10600 73572 155210 3 236 4044115 4096000 19090 130560 0 86714825 99.982 1157591 229 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 14:32:53] CVMFS is ok
[2026-01-16 14:32:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 14:32:53] Checking for apptainer binary...
[2026-01-16 14:32:53] apptainer is not installed, using version from CVMFS
[2026-01-16 14:32:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 14:32:55] epyc7v12
[2026-01-16 14:32:55] apptainer works
[2026-01-16 14:32:55] Set ATHENA_PROC_NUMBER=12
[2026-01-16 14:32:55] Set ATHENA_CORE_NUMBER=12
[2026-01-16 14:32:55] Starting ATLAS job with PandaID=6970192444
[2026-01-16 14:32:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 16:05:42]  *** The last 200 lines of the pilot log: ***
[2026-01-16 16:05:42] 2026-01-16 16:04:49,718 | INFO     | summary of transferred files:
[2026-01-16 16:05:42] 2026-01-16 16:04:49,718 | INFO     |  -- lfn=log.48215263._042885.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 16:05:42] 2026-01-16 16:04:49,718 | INFO     | stage-out finished correctly
[2026-01-16 16:05:42] 2026-01-16 16:04:50,600 | INFO     | time since job start (5483s) is within the limit (349056.0s)
[2026-01-16 16:05:42] 2026-01-16 16:04:51,515 | INFO     | monitor loop #358: job 0:6970192444 is in state 'finished'
[2026-01-16 16:05:42] 2026-01-16 16:04:51,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:05:42] 2026-01-16 16:04:51,606 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 16:05:42] 2026-01-16 16:04:51,842 | INFO     | job 6970192444 has state=finished
[2026-01-16 16:05:42] 2026-01-16 16:04:51,842 | INFO     | preparing for final server update for job 6970192444 in state='finished'
[2026-01-16 16:05:42] 2026-01-16 16:04:51,843 | INFO     | this job has now completed (state=finished)
[2026-01-16 16:05:42] 2026-01-16 16:04:51,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 16:05:42] 2026-01-16 16:04:51,843 | INFO     | log transfer has been attempted: DONE
[2026-01-16 16:05:42] 2026-01-16 16:04:51,843 | INFO     | job 6970192444 has finished - writing final server update
[2026-01-16 16:05:42] 2026-01-16 16:04:51,843 | INFO     | total number of processed events: 400 (read)
[2026-01-16 16:05:42] 2026-01-16 16:04:51,846 | INFO     | executing command: lscpu
[2026-01-16 16:05:42] 2026-01-16 16:04:51,983 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 16:05:42] 2026-01-16 16:04:52,606 | INFO     | time since job start (5485s) is within the limit (349056.0s)
[2026-01-16 16:05:42] 2026-01-16 16:04:54,018 | INFO     | monitor loop #359: job 0:6970192444 is in state 'finished'
[2026-01-16 16:05:42] 2026-01-16 16:04:54,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:05:42] 2026-01-16 16:04:54,611 | INFO     | time since job start (5487s) is within the limit (349056.0s)
[2026-01-16 16:05:42] 2026-01-16 16:04:56,521 | INFO     | monitor loop #360: job 0:6970192444 is in state 'finished'
[2026-01-16 16:05:42] 2026-01-16 16:04:56,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:05:42] 2026-01-16 16:04:56,616 | INFO     | time since job start (5489s) is within the limit (349056.0s)
[2026-01-16 16:05:42] 2026-01-16 16:04:58,621 | INFO     | time since job start (5491s) is within the limit (349056.0s)
[2026-01-16 16:05:42] 2026-01-16 16:04:59,024 | INFO     | monitor loop #361: job 0:6970192444 is in state 'finished'
[2026-01-16 16:05:42] 2026-01-16 16:04:59,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:05:42] 2026-01-16 16:05:00,627 | INFO     | time since job start (5493s) is within the limit (349056.0s)
[2026-01-16 16:05:42] 2026-01-16 16:05:01,530 | INFO     | monitor loop #362: job 0:6970192444 is in state 'finished'
[2026-01-16 16:05:42] 2026-01-16 16:05:01,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:05:42] 2026-01-16 16:05:02,635 | INFO     | time since job start (5495s) is within the limit (349056.0s)
[2026-01-16 16:05:42] 2026-01-16 16:05:04,033 | INFO     | monitor loop #363: job 0:6970192444 is in state 'finished'
[2026-01-16 16:05:42] 2026-01-16 16:05:04,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 16:05:42] 2026-01-16 16:05:04,640 | INFO     | time since job start (5497s) is within the limit (349056.0s)
[2026-01-16 16:05:42] 2026-01-16 16:05:04,986 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 16:05:42] 2026-01-16 16:05:05,029 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2402.4251328125
[2026-01-16 16:05:42] 2026-01-16 16:05:05,081 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/0/PanDA_Pilot-6970192444/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 16:05:42] 2026-01-16 16:05:05,084 | INFO     | extracted standard info from prmon json
[2026-01-16 16:05:42] 2026-01-16 16:05:05,084 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 16:05:42] 2026-01-16 16:05:05,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 16:05:42] 2026-01-16 16:05:05,086 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 16:05:42] 2026-01-16 16:05:05,086 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 16:05:42] 2026-01-16 16:05:05,089 | INFO     | fitting pss+swap vs Time
[2026-01-16 16:05:42] 2026-01-16 16:05:05,091 | INFO     | sum of square deviations: 170944600.5
[2026-01-16 16:05:42] 2026-01-16 16:05:05,092 | INFO     | sum of deviations: 2810210738.4999995
[2026-01-16 16:05:42] 2026-01-16 16:05:05,092 | INFO     | mean x: 1768576851.5
[2026-01-16 16:05:42] 2026-01-16 16:05:05,094 | INFO     | mean y: 2705411.426829268
[2026-01-16 16:05:42] 2026-01-16 16:05:05,094 | INFO     | intersect: -29071472102.286564
[2026-01-16 16:05:42] 2026-01-16 16:05:05,094 | INFO     | chi2: 0.1062677551412763
[2026-01-16 16:05:42] 2026-01-16 16:05:05,094 | INFO     | current memory leak: 16.44 B/s (using 82 data points, chi2=0.11)
[2026-01-16 16:05:42] 2026-01-16 16:05:05,095 | INFO     | could have reported an average CPU frequency of 2402 MHz (7 samples)
[2026-01-16 16:05:42] 2026-01-16 16:05:05,095 | INFO     | ..............................
[2026-01-16 16:05:42] 2026-01-16 16:05:05,095 | INFO     | . Timing measurements:
[2026-01-16 16:05:42] 2026-01-16 16:05:05,095 | INFO     | . get job = 0 s
[2026-01-16 16:05:42] 2026-01-16 16:05:05,095 | INFO     | . initial setup = 3 s
[2026-01-16 16:05:42] 2026-01-16 16:05:05,095 | INFO     | . payload setup = 17 s
[2026-01-16 16:05:42] 2026-01-16 16:05:05,096 | INFO     | . stage-in = 0 s
[2026-01-16 16:05:42] 2026-01-16 16:05:05,096 | INFO     | . payload execution = 5420 s
[2026-01-16 16:05:42] 2026-01-16 16:05:05,096 | INFO     | . stage-out = 1 s
[2026-01-16 16:05:42] 2026-01-16 16:05:05,096 | INFO     | . log creation = 0 s
[2026-01-16 16:05:42] 2026-01-16 16:05:05,096 | INFO     | ..............................
[2026-01-16 16:05:42] 2026-01-16 16:05:05,344 | INFO     | 
[2026-01-16 16:05:42] 2026-01-16 16:05:05,344 | INFO     | job summary report
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | --------------------------------------------------
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | PanDA job id: 6970192444
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | task id: 48215263
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | errors: (none)
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | pilot state: finished 
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | transexitcode: 0
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | exeerrorcode: 0
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | exeerrordiag: 
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | exitcode: 0
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | exitmsg: OK
[2026-01-16 16:05:42] 2026-01-16 16:05:05,345 | INFO     | cpuconsumptiontime: 30363 s
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | nevents: 400
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | neventsw: 0
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | pid: 1062901
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | pgrp: 1062901
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | corecount: 12
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | event service: False
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | sizes: {0: 2283804, 1: 2284003, 2: 2284031, 13: 2284031, 15: 2284349, 23: 2284377, 5442: 2311148, 5445: 2320192, 5447: 2320248, 5461: 2320442}
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | --------------------------------------------------
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | 
[2026-01-16 16:05:42] 2026-01-16 16:05:05,346 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-01-16 16:05:42] 2026-01-16 16:05:05,401 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,403 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,403 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,403 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,405 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 16:05:42] 2026-01-16 16:05:05,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,405 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 16:05:42] 2026-01-16 16:05:05,405 | INFO     | job 6970192444 has completed (purged errors)
[2026-01-16 16:05:42] 2026-01-16 16:05:05,405 | INFO     | overall cleanup function is called
[2026-01-16 16:05:42] 2026-01-16 16:05:06,422 | INFO     | --- collectZombieJob: --- 10, [1062901]
[2026-01-16 16:05:42] 2026-01-16 16:05:06,422 | INFO     | zombie collector waiting for pid 1062901
[2026-01-16 16:05:42] 2026-01-16 16:05:06,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 16:05:42] 2026-01-16 16:05:06,422 | INFO     | collected zombie processes
[2026-01-16 16:05:42] 2026-01-16 16:05:06,422 | INFO     | will attempt to kill all subprocesses of pid=1062901
[2026-01-16 16:05:42] 2026-01-16 16:05:07,257 | INFO     | PID=1050480 has CPU usage=15.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 16:05:42] 2026-01-16 16:05:07,258 | INFO     | .. there are 21 such processes running
[2026-01-16 16:05:42] 2026-01-16 16:05:07,657 | INFO     | process IDs to be killed: [1062901] (in reverse order)
[2026-01-16 16:05:42] 2026-01-16 16:05:08,140 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 16:05:42] 2026-01-16 16:05:08,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 16:05:42] 2026-01-16 16:05:08,178 | INFO     | did not find any defunct processes belonging to 1062901
[2026-01-16 16:05:42] 2026-01-16 16:05:08,216 | INFO     | did not find any defunct processes belonging to 1062901
[2026-01-16 16:05:42] 2026-01-16 16:05:08,217 | INFO     | ready for new job
[2026-01-16 16:05:42] 2026-01-16 16:05:08,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 16:05:42] 2026-01-16 16:05:08,223 | INFO     | ***************************************
[2026-01-16 16:05:42] 2026-01-16 16:05:08,223 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 16:05:42] 2026-01-16 16:05:08,223 | INFO     | ***************************************
[2026-01-16 16:05:42] 2026-01-16 16:05:08,223 | INFO     | 
[2026-01-16 16:05:42] 2026-01-16 16:05:08,235 | INFO     | architecture information:
[2026-01-16 16:05:42] 2026-01-16 16:05:08,237 | INFO     | executing command: cat /etc/os-release
[2026-01-16 16:05:42] 2026-01-16 16:05:08,275 | INFO     | cat /etc/os-release:
[2026-01-16 16:05:42] NAME="CentOS Linux"
[2026-01-16 16:05:42] VERSION="7 (Core)"
[2026-01-16 16:05:42] ID="centos"
[2026-01-16 16:05:42] ID_LIKE="rhel fedora"
[2026-01-16 16:05:42] VERSION_ID="7"
[2026-01-16 16:05:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 16:05:42] ANSI_COLOR="0;31"
[2026-01-16 16:05:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 16:05:42] HOME_URL="https://www.centos.org/"
[2026-01-16 16:05:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 16:05:42] 
[2026-01-16 16:05:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 16:05:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 16:05:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 16:05:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 16:05:42] 
[2026-01-16 16:05:42] 2026-01-16 16:05:08,275 | INFO     | ***************************************
[2026-01-16 16:05:42] 2026-01-16 16:05:08,782 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-01-16 16:05:42] 2026-01-16 16:05:08,843 | INFO     | sufficient remaining disk space (306721062912 B)
[2026-01-16 16:05:42] 2026-01-16 16:05:08,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 16:05:42] 2026-01-16 16:05:08,843 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 16:05:42] 2026-01-16 16:05:08,843 | INFO     | update_server=False
[2026-01-16 16:05:42] 2026-01-16 16:05:08,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 16:05:42] 2026-01-16 16:05:08,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 16:05:42] 2026-01-16 16:05:08,853 | INFO     | all payload control threads have been joined
[2026-01-16 16:05:42] 2026-01-16 16:05:09,005 | INFO     | all job control threads have been joined
[2026-01-16 16:05:42] 2026-01-16 16:05:09,045 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-16 16:05:42] 2026-01-16 16:05:09,045 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-16 16:05:42] 2026-01-16 16:05:09,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 16:05:42] 2026-01-16 16:05:09,046 | INFO     | will abort loop
[2026-01-16 16:05:42] 2026-01-16 16:05:09,232 | INFO     | all data control threads have been joined
[2026-01-16 16:05:42] 2026-01-16 16:05:09,850 | INFO     | [job] retrieve thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:09,858 | INFO     | [payload] control thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:10,010 | INFO     | [job] control thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:10,052 | INFO     | [job] job monitor thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:10,209 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:10,237 | INFO     | [data] control thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:10,297 | INFO     | [payload] validate_post thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:10,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 16:05:42] 2026-01-16 16:05:10,597 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:10,616 | INFO     | [job] validate thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:10,810 | INFO     | [data] copytool_in thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:10,849 | INFO     | [data] copytool_out thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:11,205 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:11,238 | INFO     | [payload] failed_post thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:11,362 | INFO     | [job] queue monitor thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:11,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 16:05:42] 2026-01-16 16:05:15,370 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:19,562 | INFO     | job.realtimelogging is not enabled
[2026-01-16 16:05:42] 2026-01-16 16:05:20,567 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 16:05:42] 2026-01-16 16:05:35,974 | INFO     | [monitor] cgroup control has ended
[2026-01-16 16:05:42] 2026-01-16 16:05:36,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127316853659456)>', '<ExcThread(monitor, started 127316176922368)>']
[2026-01-16 16:05:42] 2026-01-16 16:05:40,923 | INFO     | PID=1050480 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 16:05:42] 2026-01-16 16:05:40,924 | INFO     | .. there are 22 such processes running
[2026-01-16 16:05:42] 2026-01-16 16:05:40,924 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 16:05:42] 2026-01-16 16:05:40,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 16:05:42] 2026-01-16 16:05:40,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 16:05:42] 2026-01-16 16:05:40,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 16:05:42] 2026-01-16 16:05:40,924 | INFO     | [monitor] control thread has ended
[2026-01-16 16:05:42] 2026-01-16 16:05:41,542 | INFO     | all workflow threads have been joined
[2026-01-16 16:05:42] 2026-01-16 16:05:41,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 16:05:42] 2026-01-16 16:05:41,543 | INFO     | traces error code: 0
[2026-01-16 16:05:42] 2026-01-16 16:05:41,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 16:05:42] 2026-01-16 16:05:42,206 [wrapper] ==== pilot stdout END ====
[2026-01-16 16:05:42] 2026-01-16 16:05:42,214 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 16:05:42] 2026-01-16 16:05:42,221 [wrapper] pilotpid: 1050480
[2026-01-16 16:05:42] 2026-01-16 16:05:42,229 [wrapper] Pilot exit status: 0
[2026-01-16 16:05:42] 2026-01-16 16:05:42,264 [wrapper] pandaids: 6970192444
[2026-01-16 16:05:42] 2026-01-16 16:05:42,480 [wrapper] cleanup supervisor_pilot 1576847 1050481
[2026-01-16 16:05:42] 2026-01-16 16:05:42,488 [wrapper] Test setup, not cleaning
[2026-01-16 16:05:42] 2026-01-16 16:05:42,496 [wrapper] apfmon messages muted
[2026-01-16 16:05:42] 2026-01-16 16:05:42,504 [wrapper] ==== wrapper stdout END ====
[2026-01-16 16:05:42] 2026-01-16 16:05:42,510 [wrapper] ==== wrapper stderr END ====
[2026-01-16 16:05:42]  *** Error codes and diagnostics ***
[2026-01-16 16:05:42]     "exeErrorCode": 0,
[2026-01-16 16:05:42]     "exeErrorDiag": "",
[2026-01-16 16:05:42]     "pilotErrorCode": 0,
[2026-01-16 16:05:42]     "pilotErrorDiag": "",
[2026-01-16 16:05:42]  *** Listing of results directory ***
[2026-01-16 16:05:42] total 738204
[2026-01-16 16:05:42] -rw-r--r-- 1 boinc boinc    579449 Jan 15 03:00 pilot3.tar.gz
[2026-01-16 16:05:42] -rwx------ 1 boinc boinc     36322 Jan 15 03:04 runpilot2-wrapper.sh
[2026-01-16 16:05:42] -rw-r--r-- 1 boinc boinc      5112 Jan 15 03:05 queuedata.json
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc       100 Jan 16 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 16:05:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 14:32 run_atlas
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc       105 Jan 16 14:32 job.xml
[2026-01-16 16:05:42] -rw-r--r-- 2 boinc boinc 596022647 Jan 16 14:32 EVNT.32794306._001708.pool.root.1
[2026-01-16 16:05:42] -rw-r--r-- 2 boinc boinc     15847 Jan 16 14:32 start_atlas.sh
[2026-01-16 16:05:42] drwxrwx--x 2 boinc boinc      4096 Jan 16 14:32 shared
[2026-01-16 16:05:42] -rw-r--r-- 2 boinc boinc    592398 Jan 16 14:32 input.tar.gz
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 14:32 init_data.xml
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc         0 Jan 16 14:32 boinc_setup_complete
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc         0 Jan 16 14:32 boinc_lockfile
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc      2509 Jan 16 14:32 pandaJob.out
[2026-01-16 16:05:42] -rw------- 1 boinc boinc   1004099 Jan 16 14:33 agis_schedconf.cvmfs.json
[2026-01-16 16:05:42] -rw------- 1 boinc boinc   1516246 Jan 16 14:33 agis_ddmendpoints.agis.ALL.json
[2026-01-16 16:05:42] drwx------ 5 boinc boinc      4096 Jan 16 14:33 pilot3
[2026-01-16 16:05:42] -rw------- 1 boinc boinc 153622130 Jan 16 16:03 HITS.48215263._042885.pool.root.1
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc       531 Jan 16 16:04 boinc_task_state.xml
[2026-01-16 16:05:42] -rw------- 1 boinc boinc      1022 Jan 16 16:04 memory_monitor_summary.json
[2026-01-16 16:05:42] -rw------- 1 boinc boinc        95 Jan 16 16:04 pilot_heartbeat.json
[2026-01-16 16:05:42] -rw------- 1 boinc boinc    406428 Jan 16 16:04 log.48215263._042885.job.log.tgz.1
[2026-01-16 16:05:42] -rw------- 1 boinc boinc      7731 Jan 16 16:05 heartbeat.json
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 16:05 boinc_mmap_file
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc        27 Jan 16 16:05 wrapper_checkpoint.txt
[2026-01-16 16:05:42] -rw------- 1 boinc boinc      5106 Jan 16 16:05 pilotlog.txt
[2026-01-16 16:05:42] -rw------- 1 boinc boinc    766576 Jan 16 16:05 log.48215263._042885.job.log.1
[2026-01-16 16:05:42] -rw------- 1 boinc boinc       357 Jan 16 16:05 output.list
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc       620 Jan 16 16:05 runtime_log
[2026-01-16 16:05:42] -rw------- 1 boinc boinc   1187840 Jan 16 16:05 result.tar.gz
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 16:05 runtime_log.err
[2026-01-16 16:05:42] -rw------- 1 boinc boinc       651 Jan 16 16:05 LSzKDmbpS08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMvtKDmzkMtvm.diag
[2026-01-16 16:05:42] -rw-rw-r-- 1 boinc boinc     22053 Jan 16 16:05 stderr.txt
[2026-01-16 16:05:42] HITS file was successfully produced:
[2026-01-16 16:05:42] -rw------- 1 boinc boinc 153622130 Jan 16 16:03 shared/HITS.pool.root.1
[2026-01-16 16:05:42]  *** Contents of shared directory: ***
[2026-01-16 16:05:42] total 733844
[2026-01-16 16:05:42] -rw-r--r-- 2 boinc boinc 596022647 Jan 16 14:32 ATLAS.root_0
[2026-01-16 16:05:42] -rw-r--r-- 2 boinc boinc     15847 Jan 16 14:32 start_atlas.sh
[2026-01-16 16:05:42] -rw-r--r-- 2 boinc boinc    592398 Jan 16 14:32 input.tar.gz
[2026-01-16 16:05:42] -rw------- 1 boinc boinc 153622130 Jan 16 16:03 HITS.pool.root.1
[2026-01-16 16:05:42] -rw------- 1 boinc boinc   1187840 Jan 16 16:05 result.tar.gz
16:05:43 (1042348): run_atlas exited; CPU time 30662.324437
16:05:43 (1042348): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN