Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:04:58 (571491): wrapper (7.7.26015): starting
13:04:58 (571491): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 13:04:58] Arguments: --nthreads 12
[2026-01-16 13:04:58] Threads: 12
[2026-01-16 13:04:58] Checking for CVMFS
[2026-01-16 13:04:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 13:04:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 13:04:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 13:04:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 13:04:59] 2.13.3.0 40677 10513 78644 155208 2 236 4036349 4096001 18741 130560 0 85372515 99.982 1154836 230 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 13:04:59] CVMFS is ok
[2026-01-16 13:04:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 13:04:59] Checking for apptainer binary...
[2026-01-16 13:04:59] apptainer is not installed, using version from CVMFS
[2026-01-16 13:04:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 13:05:01] epyc7v12
[2026-01-16 13:05:01] apptainer works
[2026-01-16 13:05:01] Set ATHENA_PROC_NUMBER=12
[2026-01-16 13:05:01] Set ATHENA_CORE_NUMBER=12
[2026-01-16 13:05:01] Starting ATLAS job with PandaID=6969981939
[2026-01-16 13:05:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 14:32:46]  *** The last 200 lines of the pilot log: ***
[2026-01-16 14:32:46] 2026-01-16 14:31:42,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:32:46] 2026-01-16 14:31:42,458 | INFO     | PID=584114 has CPU usage=16.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 14:32:46] 2026-01-16 14:31:42,462 | INFO     | .. there are 22 such processes running
[2026-01-16 14:32:46] 2026-01-16 14:31:43,462 | INFO     | time since job start (5172s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:31:44,803 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 14:32:46] 2026-01-16 14:31:44,897 | INFO     | monitor loop #342: job 0:6969981939 is in state 'finished'
[2026-01-16 14:32:46] 2026-01-16 14:31:44,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:32:46] 2026-01-16 14:31:45,467 | INFO     | time since job start (5174s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:31:47,267 | INFO     | job 6969981939 has state=finished
[2026-01-16 14:32:46] 2026-01-16 14:31:47,267 | INFO     | preparing for final server update for job 6969981939 in state='finished'
[2026-01-16 14:32:46] 2026-01-16 14:31:47,268 | INFO     | this job has now completed (state=finished)
[2026-01-16 14:32:46] 2026-01-16 14:31:47,268 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 14:32:46] 2026-01-16 14:31:47,268 | INFO     | log transfer has been attempted: DONE
[2026-01-16 14:32:46] 2026-01-16 14:31:47,268 | INFO     | job 6969981939 has finished - writing final server update
[2026-01-16 14:32:46] 2026-01-16 14:31:47,269 | INFO     | total number of processed events: 400 (read)
[2026-01-16 14:32:46] 2026-01-16 14:31:47,271 | INFO     | executing command: lscpu
[2026-01-16 14:32:46] 2026-01-16 14:31:47,421 | INFO     | monitor loop #343: job 0:6969981939 is in state 'finished'
[2026-01-16 14:32:46] 2026-01-16 14:31:47,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:32:46] 2026-01-16 14:31:47,431 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 14:32:46] 2026-01-16 14:31:47,473 | INFO     | time since job start (5176s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:31:49,481 | INFO     | time since job start (5178s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:31:49,925 | INFO     | monitor loop #344: job 0:6969981939 is in state 'finished'
[2026-01-16 14:32:46] 2026-01-16 14:31:49,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:32:46] 2026-01-16 14:31:51,486 | INFO     | time since job start (5180s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:31:52,428 | INFO     | monitor loop #345: job 0:6969981939 is in state 'finished'
[2026-01-16 14:32:46] 2026-01-16 14:31:52,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:32:46] 2026-01-16 14:31:53,491 | INFO     | time since job start (5182s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:31:54,937 | INFO     | monitor loop #346: job 0:6969981939 is in state 'finished'
[2026-01-16 14:32:46] 2026-01-16 14:31:54,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:32:46] 2026-01-16 14:31:55,500 | INFO     | time since job start (5184s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:31:57,441 | INFO     | monitor loop #347: job 0:6969981939 is in state 'finished'
[2026-01-16 14:32:46] 2026-01-16 14:31:57,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:32:46] 2026-01-16 14:31:57,505 | INFO     | time since job start (5186s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:31:59,513 | INFO     | time since job start (5188s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:31:59,944 | INFO     | monitor loop #348: job 0:6969981939 is in state 'finished'
[2026-01-16 14:32:46] 2026-01-16 14:31:59,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:32:46] 2026-01-16 14:32:01,518 | INFO     | time since job start (5190s) is within the limit (349056.0s)
[2026-01-16 14:32:46] 2026-01-16 14:32:01,683 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 14:32:46] 2026-01-16 14:32:01,735 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2398.874984375
[2026-01-16 14:32:46] 2026-01-16 14:32:01,788 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/0/PanDA_Pilot-6969981939/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 14:32:46] 2026-01-16 14:32:01,791 | INFO     | extracted standard info from prmon json
[2026-01-16 14:32:46] 2026-01-16 14:32:01,792 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 14:32:46] 2026-01-16 14:32:01,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 14:32:46] 2026-01-16 14:32:01,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 14:32:46] 2026-01-16 14:32:01,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 14:32:46] 2026-01-16 14:32:01,794 | INFO     | fitting pss+swap vs Time
[2026-01-16 14:32:46] 2026-01-16 14:32:01,795 | INFO     | sum of square deviations: 141539398.0
[2026-01-16 14:32:46] 2026-01-16 14:32:01,795 | INFO     | sum of deviations: 7241347271.0
[2026-01-16 14:32:46] 2026-01-16 14:32:01,795 | INFO     | mean x: 1768571423.0
[2026-01-16 14:32:46] 2026-01-16 14:32:01,795 | INFO     | mean y: 2663864.883116883
[2026-01-16 14:32:46] 2026-01-16 14:32:01,795 | INFO     | intersect: -90479845093.57407
[2026-01-16 14:32:46] 2026-01-16 14:32:01,796 | INFO     | chi2: 0.16417901755147582
[2026-01-16 14:32:46] 2026-01-16 14:32:01,796 | INFO     | current memory leak: 51.16 B/s (using 77 data points, chi2=0.16)
[2026-01-16 14:32:46] 2026-01-16 14:32:01,796 | INFO     | could have reported an average CPU frequency of 2401 MHz (6 samples)
[2026-01-16 14:32:46] 2026-01-16 14:32:01,796 | INFO     | ..............................
[2026-01-16 14:32:46] 2026-01-16 14:32:01,796 | INFO     | . Timing measurements:
[2026-01-16 14:32:46] 2026-01-16 14:32:01,797 | INFO     | . get job = 0 s
[2026-01-16 14:32:46] 2026-01-16 14:32:01,797 | INFO     | . initial setup = 2 s
[2026-01-16 14:32:46] 2026-01-16 14:32:01,797 | INFO     | . payload setup = 17 s
[2026-01-16 14:32:46] 2026-01-16 14:32:01,797 | INFO     | . stage-in = 0 s
[2026-01-16 14:32:46] 2026-01-16 14:32:01,797 | INFO     | . payload execution = 5110 s
[2026-01-16 14:32:46] 2026-01-16 14:32:01,797 | INFO     | . stage-out = 1 s
[2026-01-16 14:32:46] 2026-01-16 14:32:01,797 | INFO     | . log creation = 0 s
[2026-01-16 14:32:46] 2026-01-16 14:32:01,797 | INFO     | ..............................
[2026-01-16 14:32:46] 2026-01-16 14:32:02,434 | INFO     | 
[2026-01-16 14:32:46] 2026-01-16 14:32:02,434 | INFO     | job summary report
[2026-01-16 14:32:46] 2026-01-16 14:32:02,434 | INFO     | --------------------------------------------------
[2026-01-16 14:32:46] 2026-01-16 14:32:02,434 | INFO     | PanDA job id: 6969981939
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | task id: 48215263
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | errors: (none)
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | pilot state: finished 
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | transexitcode: 0
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | exeerrorcode: 0
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | exeerrordiag: 
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | exitcode: 0
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | exitmsg: OK
[2026-01-16 14:32:46] 2026-01-16 14:32:02,435 | INFO     | cpuconsumptiontime: 28652 s
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | nevents: 400
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | neventsw: 0
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | pid: 596510
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | pgrp: 596510
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | corecount: 12
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | event service: False
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | sizes: {0: 2283747, 1: 2284002, 2: 2284002, 12: 2284030, 15: 2284320, 23: 2284348, 5131: 2311127, 5132: 2311126, 5133: 2320226, 5136: 2320282, 5153: 2320476}
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | --------------------------------------------------
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | 
[2026-01-16 14:32:46] 2026-01-16 14:32:02,436 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-01-16 14:32:46] 2026-01-16 14:32:02,503 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,503 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,503 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,503 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,505 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 14:32:46] 2026-01-16 14:32:02,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,508 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 14:32:46] 2026-01-16 14:32:02,508 | INFO     | job 6969981939 has completed (purged errors)
[2026-01-16 14:32:46] 2026-01-16 14:32:02,508 | INFO     | overall cleanup function is called
[2026-01-16 14:32:46] 2026-01-16 14:32:03,526 | INFO     | --- collectZombieJob: --- 10, [596510]
[2026-01-16 14:32:46] 2026-01-16 14:32:03,526 | INFO     | zombie collector waiting for pid 596510
[2026-01-16 14:32:46] 2026-01-16 14:32:03,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 14:32:46] 2026-01-16 14:32:03,526 | INFO     | collected zombie processes
[2026-01-16 14:32:46] 2026-01-16 14:32:03,527 | INFO     | will attempt to kill all subprocesses of pid=596510
[2026-01-16 14:32:46] 2026-01-16 14:32:04,852 | INFO     | process IDs to be killed: [596510] (in reverse order)
[2026-01-16 14:32:46] 2026-01-16 14:32:05,384 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 14:32:46] 2026-01-16 14:32:05,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 14:32:46] 2026-01-16 14:32:05,424 | INFO     | did not find any defunct processes belonging to 596510
[2026-01-16 14:32:46] 2026-01-16 14:32:05,460 | INFO     | did not find any defunct processes belonging to 596510
[2026-01-16 14:32:46] 2026-01-16 14:32:05,460 | INFO     | ready for new job
[2026-01-16 14:32:46] 2026-01-16 14:32:05,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 14:32:46] 2026-01-16 14:32:05,465 | INFO     | ***************************************
[2026-01-16 14:32:46] 2026-01-16 14:32:05,465 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 14:32:46] 2026-01-16 14:32:05,465 | INFO     | ***************************************
[2026-01-16 14:32:46] 2026-01-16 14:32:05,465 | INFO     | 
[2026-01-16 14:32:46] 2026-01-16 14:32:05,485 | INFO     | architecture information:
[2026-01-16 14:32:46] 2026-01-16 14:32:05,487 | INFO     | executing command: cat /etc/os-release
[2026-01-16 14:32:46] 2026-01-16 14:32:05,526 | INFO     | cat /etc/os-release:
[2026-01-16 14:32:46] NAME="CentOS Linux"
[2026-01-16 14:32:46] VERSION="7 (Core)"
[2026-01-16 14:32:46] ID="centos"
[2026-01-16 14:32:46] ID_LIKE="rhel fedora"
[2026-01-16 14:32:46] VERSION_ID="7"
[2026-01-16 14:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 14:32:46] ANSI_COLOR="0;31"
[2026-01-16 14:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 14:32:46] HOME_URL="https://www.centos.org/"
[2026-01-16 14:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 14:32:46] 
[2026-01-16 14:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 14:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 14:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 14:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 14:32:46] 
[2026-01-16 14:32:46] 2026-01-16 14:32:05,527 | INFO     | ***************************************
[2026-01-16 14:32:46] 2026-01-16 14:32:06,031 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-01-16 14:32:46] 2026-01-16 14:32:06,087 | INFO     | sufficient remaining disk space (294792462336 B)
[2026-01-16 14:32:46] 2026-01-16 14:32:06,087 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 14:32:46] 2026-01-16 14:32:06,088 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 14:32:46] 2026-01-16 14:32:06,088 | INFO     | update_server=False
[2026-01-16 14:32:46] 2026-01-16 14:32:06,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 14:32:46] 2026-01-16 14:32:06,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 14:32:46] 2026-01-16 14:32:06,090 | INFO     | aborting loop
[2026-01-16 14:32:46] 2026-01-16 14:32:06,605 | INFO     | all payload control threads have been joined
[2026-01-16 14:32:46] 2026-01-16 14:32:06,959 | INFO     | all data control threads have been joined
[2026-01-16 14:32:46] 2026-01-16 14:32:07,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 14:32:46] 2026-01-16 14:32:07,049 | INFO     | all job control threads have been joined
[2026-01-16 14:32:46] 2026-01-16 14:32:07,095 | INFO     | [job] job monitor thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:07,096 | INFO     | [job] retrieve thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:07,413 | INFO     | [payload] failed_post thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:07,506 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:07,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 14:32:46] 2026-01-16 14:32:07,610 | INFO     | [payload] control thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:07,615 | INFO     | [data] copytool_in thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:07,964 | INFO     | [data] control thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:08,012 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:08,020 | INFO     | [job] queue monitor thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:08,054 | INFO     | [job] control thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:08,214 | INFO     | [job] validate thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:08,341 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:08,447 | INFO     | [payload] validate_post thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:09,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 14:32:46] 2026-01-16 14:32:09,553 | INFO     | [data] copytool_out thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:13,053 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:17,062 | INFO     | job.realtimelogging is not enabled
[2026-01-16 14:32:46] 2026-01-16 14:32:18,069 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 14:32:46] 2026-01-16 14:32:35,754 | INFO     | PID=584114 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-16 14:32:46] 2026-01-16 14:32:35,754 | INFO     | .. there are 22 such processes running
[2026-01-16 14:32:46] 2026-01-16 14:32:35,755 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 14:32:46] 2026-01-16 14:32:35,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 14:32:46] 2026-01-16 14:32:35,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 14:32:46] 2026-01-16 14:32:39,649 | INFO     | [monitor] cgroup control has ended
[2026-01-16 14:32:46] 2026-01-16 14:32:40,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136339906225984)>', '<ExcThread(monitor, started 136339232122624)>']
[2026-01-16 14:32:46] 2026-01-16 14:32:40,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 14:32:46] 2026-01-16 14:32:40,785 | INFO     | [monitor] control thread has ended
[2026-01-16 14:32:46] 2026-01-16 14:32:45,296 | INFO     | all workflow threads have been joined
[2026-01-16 14:32:46] 2026-01-16 14:32:45,296 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 14:32:46] 2026-01-16 14:32:45,296 | INFO     | traces error code: 0
[2026-01-16 14:32:46] 2026-01-16 14:32:45,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 14:32:46] 2026-01-16 14:32:45,654 [wrapper] ==== pilot stdout END ====
[2026-01-16 14:32:46] 2026-01-16 14:32:45,666 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 14:32:46] 2026-01-16 14:32:45,675 [wrapper] pilotpid: 584114
[2026-01-16 14:32:46] 2026-01-16 14:32:45,682 [wrapper] Pilot exit status: 0
[2026-01-16 14:32:46] 2026-01-16 14:32:45,719 [wrapper] pandaids: 6969981939
[2026-01-16 14:32:46] 2026-01-16 14:32:45,978 [wrapper] cleanup supervisor_pilot 1011819 584116
[2026-01-16 14:32:46] 2026-01-16 14:32:45,987 [wrapper] Test setup, not cleaning
[2026-01-16 14:32:46] 2026-01-16 14:32:45,996 [wrapper] apfmon messages muted
[2026-01-16 14:32:46] 2026-01-16 14:32:46,005 [wrapper] ==== wrapper stdout END ====
[2026-01-16 14:32:46] 2026-01-16 14:32:46,012 [wrapper] ==== wrapper stderr END ====
[2026-01-16 14:32:46]  *** Error codes and diagnostics ***
[2026-01-16 14:32:46]     "exeErrorCode": 0,
[2026-01-16 14:32:46]     "exeErrorDiag": "",
[2026-01-16 14:32:46]     "pilotErrorCode": 0,
[2026-01-16 14:32:46]     "pilotErrorDiag": "",
[2026-01-16 14:32:46]  *** Listing of results directory ***
[2026-01-16 14:32:46] total 728460
[2026-01-16 14:32:46] -rw-r--r-- 1 boinc boinc    579449 Jan 14 23:30 pilot3.tar.gz
[2026-01-16 14:32:46] -rwx------ 1 boinc boinc     36322 Jan 14 23:32 runpilot2-wrapper.sh
[2026-01-16 14:32:46] -rw-r--r-- 1 boinc boinc      5112 Jan 14 23:35 queuedata.json
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc       100 Jan 16 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 14:32:46] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 13:04 run_atlas
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc       105 Jan 16 13:04 job.xml
[2026-01-16 14:32:46] -rw-r--r-- 2 boinc boinc 593601379 Jan 16 13:04 EVNT.32794306._001559.pool.root.1
[2026-01-16 14:32:46] -rw-r--r-- 2 boinc boinc     15847 Jan 16 13:04 start_atlas.sh
[2026-01-16 14:32:46] drwxrwx--x 2 boinc boinc      4096 Jan 16 13:04 shared
[2026-01-16 14:32:46] -rw-r--r-- 2 boinc boinc    592398 Jan 16 13:04 input.tar.gz
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 13:04 init_data.xml
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc         0 Jan 16 13:04 boinc_setup_complete
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc         0 Jan 16 13:04 boinc_lockfile
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc      2508 Jan 16 13:05 pandaJob.out
[2026-01-16 14:32:46] -rw------- 1 boinc boinc   1004091 Jan 16 13:05 agis_schedconf.cvmfs.json
[2026-01-16 14:32:46] -rw------- 1 boinc boinc   1516246 Jan 16 13:05 agis_ddmendpoints.agis.ALL.json
[2026-01-16 14:32:46] drwx------ 5 boinc boinc      4096 Jan 16 13:05 pilot3
[2026-01-16 14:32:46] -rw------- 1 boinc boinc 146192800 Jan 16 14:30 HITS.48215263._039108.pool.root.1
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc       531 Jan 16 14:30 boinc_task_state.xml
[2026-01-16 14:32:46] -rw------- 1 boinc boinc      1023 Jan 16 14:31 memory_monitor_summary.json
[2026-01-16 14:32:46] -rw------- 1 boinc boinc    384793 Jan 16 14:31 log.48215263._039108.job.log.tgz.1
[2026-01-16 14:32:46] -rw------- 1 boinc boinc      7729 Jan 16 14:32 heartbeat.json
[2026-01-16 14:32:46] -rw------- 1 boinc boinc        95 Jan 16 14:32 pilot_heartbeat.json
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 14:32 boinc_mmap_file
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc        27 Jan 16 14:32 wrapper_checkpoint.txt
[2026-01-16 14:32:46] -rw------- 1 boinc boinc      4919 Jan 16 14:32 pilotlog.txt
[2026-01-16 14:32:46] -rw------- 1 boinc boinc    726614 Jan 16 14:32 log.48215263._039108.job.log.1
[2026-01-16 14:32:46] -rw------- 1 boinc boinc       357 Jan 16 14:32 output.list
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc       620 Jan 16 14:32 runtime_log
[2026-01-16 14:32:46] -rw------- 1 boinc boinc   1126400 Jan 16 14:32 result.tar.gz
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 14:32 runtime_log.err
[2026-01-16 14:32:46] -rw------- 1 boinc boinc       652 Jan 16 14:32 aydLDmZWP08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3EtKDmXKwIUm.diag
[2026-01-16 14:32:46] -rw-rw-r-- 1 boinc boinc     22141 Jan 16 14:32 stderr.txt
[2026-01-16 14:32:46] HITS file was successfully produced:
[2026-01-16 14:32:46] -rw------- 1 boinc boinc 146192800 Jan 16 14:30 shared/HITS.pool.root.1
[2026-01-16 14:32:46]  *** Contents of shared directory: ***
[2026-01-16 14:32:46] total 724164
[2026-01-16 14:32:46] -rw-r--r-- 2 boinc boinc 593601379 Jan 16 13:04 ATLAS.root_0
[2026-01-16 14:32:46] -rw-r--r-- 2 boinc boinc     15847 Jan 16 13:04 start_atlas.sh
[2026-01-16 14:32:46] -rw-r--r-- 2 boinc boinc    592398 Jan 16 13:04 input.tar.gz
[2026-01-16 14:32:46] -rw------- 1 boinc boinc 146192800 Jan 16 14:30 HITS.pool.root.1
[2026-01-16 14:32:46] -rw------- 1 boinc boinc   1126400 Jan 16 14:32 result.tar.gz
14:32:47 (571491): run_atlas exited; CPU time 28943.519628
14:32:47 (571491): called boinc_finish(0)

</stderr_txt>
]]>

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