Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:02:09 (832905): wrapper (7.7.26015): starting
09:02:09 (832905): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 09:02:09] Arguments: --nthreads 4
[2026-01-15 09:02:09] Threads: 4
[2026-01-15 09:02:09] Checking for CVMFS
[2026-01-15 09:02:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:02:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:02:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:02:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:02:09] 2.9.2.0 3025 1889 97460 155160 3 62 20855825 36864000 0 130560 0 2213073 99.993 70221 11566 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 09:02:09] CVMFS is ok
[2026-01-15 09:02:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:02:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:02:09] Further information can be found at the LHC@home message board.
[2026-01-15 09:02:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:02:09] Checking for apptainer binary...
[2026-01-15 09:02:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:02:09] Running /usr/bin/apptainer --version
[2026-01-15 09:02:09] apptainer version 1.4.1-1.1
[2026-01-15 09:02:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:02:09] thA314
[2026-01-15 09:02:09] apptainer works
[2026-01-15 09:02:09] Set ATHENA_PROC_NUMBER=4
[2026-01-15 09:02:09] Set ATHENA_CORE_NUMBER=4
[2026-01-15 09:02:09] Starting ATLAS job with PandaID=6970285575
[2026-01-15 09:02:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 09:50:32]  *** The last 200 lines of the pilot log: ***
[2026-01-15 09:50:32]  mtime=0
[2026-01-15 09:50:32]  protocol_id=None
[2026-01-15 09:50:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 09:50:32]  replicas=None
[2026-01-15 09:50:32]  scope=mc23_13p6TeV
[2026-01-15 09:50:32]  status=None
[2026-01-15 09:50:32]  status_code=0
[2026-01-15 09:50:32]  storage_token=
[2026-01-15 09:50:32]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6970285575/log.48215263._043500.job.log.tgz.1
[2026-01-15 09:50:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/a3/log.48215263._043500.job.log.tgz.1
[2026-01-15 09:50:32]  workdir=None
[2026-01-15 09:50:32] ]
[2026-01-15 09:50:32] 2026-01-15 08:49:52,153 | INFO     | transferring file log.48215263._043500.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6970285575/log.48215263._043500.job.log.tgz.1 to /local/data/boinc/
[2026-01-15 09:50:32] 2026-01-15 08:49:52,153 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6970285575/log.48215263._043500.job.log.tgz.1 /local/data/boinc/slots/0/log.48215263._0435
[2026-01-15 09:50:32] 2026-01-15 08:49:52,172 | INFO     | adding to output.list: log.48215263._043500.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/a3/log.48215263._043500.job.log.tg
[2026-01-15 09:50:32] 2026-01-15 08:49:52,173 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 09:50:32] 2026-01-15 08:49:52,173 | INFO     | summary of transferred files:
[2026-01-15 09:50:32] 2026-01-15 08:49:52,173 | INFO     |  -- lfn=log.48215263._043500.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 09:50:32] 2026-01-15 08:49:52,173 | INFO     | stage-out finished correctly
[2026-01-15 09:50:32] 2026-01-15 08:49:53,274 | INFO     | time since job start (2856s) is within the limit (349056.0s)
[2026-01-15 09:50:32] 2026-01-15 08:49:54,600 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 09:50:32] 2026-01-15 08:49:55,281 | INFO     | time since job start (2858s) is within the limit (349056.0s)
[2026-01-15 09:50:32] 2026-01-15 08:49:55,819 | INFO     | job 6970285575 has state=finished
[2026-01-15 09:50:32] 2026-01-15 08:49:55,819 | INFO     | preparing for final server update for job 6970285575 in state='finished'
[2026-01-15 09:50:32] 2026-01-15 08:49:55,819 | INFO     | this job has now completed (state=finished)
[2026-01-15 09:50:32] 2026-01-15 08:49:55,820 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 09:50:32] 2026-01-15 08:49:55,820 | INFO     | log transfer has been attempted: DONE
[2026-01-15 09:50:32] 2026-01-15 08:49:55,820 | INFO     | job 6970285575 has finished - writing final server update
[2026-01-15 09:50:32] 2026-01-15 08:49:55,820 | INFO     | total number of processed events: 400 (read)
[2026-01-15 09:50:32] 2026-01-15 08:49:55,821 | INFO     | executing command: lscpu
[2026-01-15 09:50:32] 2026-01-15 08:49:55,841 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 09:50:32] 2026-01-15 08:49:56,612 | WARNING  | process 843255 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 09:50:32] 2026-01-15 08:49:56,612 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6970285575/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 09:50:32] 2026-01-15 08:49:56,671 | INFO     | number of running child processes to parent process 843255: 1
[2026-01-15 09:50:32] 2026-01-15 08:49:56,671 | INFO     | maximum number of monitored processes: 6
[2026-01-15 09:50:32] 2026-01-15 08:49:57,286 | INFO     | time since job start (2860s) is within the limit (349056.0s)
[2026-01-15 09:50:32] 2026-01-15 08:49:59,174 | INFO     | monitor loop #222: job 0:6970285575 is in state 'finished'
[2026-01-15 09:50:32] 2026-01-15 08:49:59,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 09:50:32] 2026-01-15 08:49:59,292 | INFO     | time since job start (2862s) is within the limit (349056.0s)
[2026-01-15 09:50:32] 2026-01-15 08:50:00,512 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 09:50:32] 2026-01-15 08:50:00,514 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3097.7840624999994
[2026-01-15 09:50:32] 2026-01-15 08:50:00,515 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6970285575/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 09:50:32] 2026-01-15 08:50:00,515 | INFO     | extracted standard info from prmon json
[2026-01-15 09:50:32] 2026-01-15 08:50:00,515 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 09:50:32] 2026-01-15 08:50:00,516 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 09:50:32] 2026-01-15 08:50:00,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 09:50:32] 2026-01-15 08:50:00,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 09:50:32] 2026-01-15 08:50:00,516 | INFO     | fitting pss+swap vs Time
[2026-01-15 09:50:32] 2026-01-15 08:50:00,516 | INFO     | sum of square deviations: 19832930.0
[2026-01-15 09:50:32] 2026-01-15 08:50:00,516 | INFO     | sum of deviations: -1792822696.0
[2026-01-15 09:50:32] 2026-01-15 08:50:00,516 | INFO     | mean x: 1768465654.5
[2026-01-15 09:50:32] 2026-01-15 08:50:00,516 | INFO     | mean y: 2474870.4
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | intersect: 159865155900.59042
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | chi2: 0.049367131359978444
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | current memory leak: -90.40 B/s (using 40 data points, chi2=0.05)
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | could have reported an average CPU frequency of 3537 MHz (5 samples)
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | ..............................
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | . Timing measurements:
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | . get job = 0 s
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | . initial setup = 1 s
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | . payload setup = 4 s
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | . stage-in = 0 s
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | . payload execution = 2831 s
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | . stage-out = 0 s
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | . log creation = 0 s
[2026-01-15 09:50:32] 2026-01-15 08:50:00,517 | INFO     | ..............................
[2026-01-15 09:50:32] 2026-01-15 08:50:00,556 | INFO     | 
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | job summary report
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | --------------------------------------------------
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | PanDA job id: 6970285575
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | task id: 48215263
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | errors: (none)
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | pilot state: finished 
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | transexitcode: 0
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | exeerrorcode: 0
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | exeerrordiag: 
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | exitcode: 0
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | exitmsg: OK
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | cpuconsumptiontime: 10486 s
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | nevents: 400
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | neventsw: 0
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | pid: 843255
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | pgrp: 843255
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | corecount: 4
[2026-01-15 09:50:32] 2026-01-15 08:50:00,557 | INFO     | event service: False
[2026-01-15 09:50:32] 2026-01-15 08:50:00,558 | INFO     | sizes: {0: 2283731, 1: 2283930, 4: 2284192, 11: 2284220, 2839: 2309683, 2840: 2318687, 2842: 2318871, 2848: 2319097}
[2026-01-15 09:50:32] 2026-01-15 08:50:00,558 | INFO     | --------------------------------------------------
[2026-01-15 09:50:32] 2026-01-15 08:50:00,558 | INFO     | 
[2026-01-15 09:50:32] 2026-01-15 08:50:00,558 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,576 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 09:50:32] 2026-01-15 08:50:00,577 | INFO     | job 6970285575 has completed (purged errors)
[2026-01-15 09:50:32] 2026-01-15 08:50:00,577 | INFO     | overall cleanup function is called
[2026-01-15 09:50:32] 2026-01-15 08:50:01,583 | INFO     | --- collectZombieJob: --- 10, [843255]
[2026-01-15 09:50:32] 2026-01-15 08:50:01,584 | INFO     | zombie collector waiting for pid 843255
[2026-01-15 09:50:32] 2026-01-15 08:50:01,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 09:50:32] 2026-01-15 08:50:01,584 | INFO     | collected zombie processes
[2026-01-15 09:50:32] 2026-01-15 08:50:01,584 | INFO     | will attempt to kill all subprocesses of pid=843255
[2026-01-15 09:50:32] 2026-01-15 08:50:01,628 | INFO     | process IDs to be killed: [843255] (in reverse order)
[2026-01-15 09:50:32] 2026-01-15 08:50:01,662 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 09:50:32] 2026-01-15 08:50:01,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 09:50:32] 2026-01-15 08:50:01,664 | INFO     | did not find any defunct processes belonging to 843255
[2026-01-15 09:50:32] 2026-01-15 08:50:01,665 | INFO     | did not find any defunct processes belonging to 843255
[2026-01-15 09:50:32] 2026-01-15 08:50:01,665 | INFO     | ready for new job
[2026-01-15 09:50:32] 2026-01-15 08:50:01,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 09:50:32] 2026-01-15 08:50:01,666 | INFO     | ***************************************
[2026-01-15 09:50:32] 2026-01-15 08:50:01,666 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 09:50:32] 2026-01-15 08:50:01,666 | INFO     | ***************************************
[2026-01-15 09:50:32] 2026-01-15 08:50:01,666 | INFO     | 
[2026-01-15 09:50:32] 2026-01-15 08:50:01,667 | INFO     | architecture information:
[2026-01-15 09:50:32] 2026-01-15 08:50:01,667 | INFO     | executing command: cat /etc/os-release
[2026-01-15 09:50:32] 2026-01-15 08:50:01,681 | INFO     | cat /etc/os-release:
[2026-01-15 09:50:32] NAME="CentOS Linux"
[2026-01-15 09:50:32] VERSION="7 (Core)"
[2026-01-15 09:50:32] ID="centos"
[2026-01-15 09:50:32] ID_LIKE="rhel fedora"
[2026-01-15 09:50:32] VERSION_ID="7"
[2026-01-15 09:50:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 09:50:32] ANSI_COLOR="0;31"
[2026-01-15 09:50:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 09:50:32] HOME_URL="https://www.centos.org/"
[2026-01-15 09:50:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 09:50:32] 
[2026-01-15 09:50:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 09:50:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 09:50:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 09:50:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 09:50:32] 
[2026-01-15 09:50:32] 2026-01-15 08:50:01,681 | INFO     | ***************************************
[2026-01-15 09:50:32] 2026-01-15 08:50:02,184 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 09:50:32] 2026-01-15 08:50:02,202 | INFO     | sufficient remaining disk space (238113783808 B)
[2026-01-15 09:50:32] 2026-01-15 08:50:02,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 09:50:32] 2026-01-15 08:50:02,202 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 09:50:32] 2026-01-15 08:50:02,202 | INFO     | update_server=False
[2026-01-15 09:50:32] 2026-01-15 08:50:02,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 09:50:32] 2026-01-15 08:50:02,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 09:50:32] 2026-01-15 08:50:02,329 | INFO     | all job control threads have been joined
[2026-01-15 09:50:32] 2026-01-15 08:50:02,683 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 09:50:32] 2026-01-15 08:50:02,683 | INFO     | aborting loop
[2026-01-15 09:50:32] 2026-01-15 08:50:02,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 09:50:32] 2026-01-15 08:50:02,864 | INFO     | all data control threads have been joined
[2026-01-15 09:50:32] 2026-01-15 08:50:03,208 | INFO     | [job] retrieve thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:03,208 | INFO     | [job] queue monitor thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:03,335 | INFO     | [job] control thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:03,606 | INFO     | all payload control threads have been joined
[2026-01-15 09:50:32] 2026-01-15 08:50:03,619 | INFO     | [data] copytool_in thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:03,649 | INFO     | [payload] validate_post thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:03,689 | INFO     | [job] job monitor thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:03,869 | INFO     | [data] control thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:04,021 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:04,391 | INFO     | [job] validate thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:04,505 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:04,590 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:04,612 | INFO     | [payload] control thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:04,698 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:04,729 | INFO     | [payload] failed_post thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:04,734 | INFO     | [data] copytool_out thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:05,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 09:50:32] 2026-01-15 08:50:09,159 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 09:50:32] 2026-01-15 08:50:20,584 | INFO     | [monitor] cgroup control has ended
[2026-01-15 09:50:32] 2026-01-15 08:50:21,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107974952768)>', '<ExcThread(monitor, started 140107092829952)>']
[2026-01-15 09:50:32] 2026-01-15 08:50:26,325 | INFO     | all workflow threads have been joined
[2026-01-15 09:50:32] 2026-01-15 08:50:26,325 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 09:50:32] 2026-01-15 08:50:26,325 | INFO     | traces error code: 0
[2026-01-15 09:50:32] 2026-01-15 08:50:26,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 09:50:32] 2026-01-15 08:50:32,424 | INFO     | PID=836681 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 09:50:32] 2026-01-15 08:50:32,424 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 09:50:32] 2026-01-15 08:50:32,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 09:50:32] 2026-01-15 08:50:32,424 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 09:50:32] 2026-01-15 08:50:32,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 09:50:32] 2026-01-15 08:50:32,424 | INFO     | [monitor] control thread has ended
[2026-01-15 09:50:32] 2026-01-15 08:50:32,500 [wrapper] ==== pilot stdout END ====
[2026-01-15 09:50:32] 2026-01-15 08:50:32,504 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 09:50:32] 2026-01-15 08:50:32,508 [wrapper] pilotpid: 836681
[2026-01-15 09:50:32] 2026-01-15 08:50:32,512 [wrapper] Pilot exit status: 0
[2026-01-15 09:50:32] 2026-01-15 08:50:32,523 [wrapper] pandaids: 6970285575
[2026-01-15 09:50:32] 2026-01-15 08:50:32,545 [wrapper] cleanup supervisor_pilot  852634 836682
[2026-01-15 09:50:32] 2026-01-15 08:50:32,549 [wrapper] Test setup, not cleaning
[2026-01-15 09:50:32] 2026-01-15 08:50:32,552 [wrapper] apfmon messages muted
[2026-01-15 09:50:32] 2026-01-15 08:50:32,556 [wrapper] ==== wrapper stdout END ====
[2026-01-15 09:50:32] 2026-01-15 08:50:32,560 [wrapper] ==== wrapper stderr END ====
[2026-01-15 09:50:32]  *** Error codes and diagnostics ***
[2026-01-15 09:50:32]     "exeErrorCode": 0,
[2026-01-15 09:50:32]     "exeErrorDiag": "",
[2026-01-15 09:50:32]     "pilotErrorCode": 0,
[2026-01-15 09:50:32]     "pilotErrorDiag": "",
[2026-01-15 09:50:32]  *** Listing of results directory ***
[2026-01-15 09:50:32] total 735480
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc    579449 Jan 15 04:00 pilot3.tar.gz
[2026-01-15 09:50:32] -rwx------ 1 boinc boinc     36322 Jan 15 04:02 runpilot2-wrapper.sh
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc      5112 Jan 15 04:05 queuedata.json
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc       100 Jan 15 09:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 09:50:32] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 09:02 run_atlas
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc       105 Jan 15 09:02 job.xml
[2026-01-15 09:50:32] -rw-r--r-- 2 boinc boinc 596689044 Jan 15 09:02 EVNT.32794306._000937.pool.root.1
[2026-01-15 09:50:32] -rw-r--r-- 2 boinc boinc    592404 Jan 15 09:02 input.tar.gz
[2026-01-15 09:50:32] -rw-r--r-- 2 boinc boinc     15847 Jan 15 09:02 start_atlas.sh
[2026-01-15 09:50:32] drwxrwx--x 2 boinc boinc      4096 Jan 15 09:02 shared
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc         0 Jan 15 09:02 boinc_setup_complete
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc      6376 Jan 15 09:02 init_data.xml
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc         0 Jan 15 09:02 boinc_lockfile
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc      2507 Jan 15 09:02 pandaJob.out
[2026-01-15 09:50:32] -rw------- 1 boinc boinc    999480 Jan 15 09:02 agis_schedconf.cvmfs.json
[2026-01-15 09:50:32] -rw------- 1 boinc boinc   1516246 Jan 15 09:02 agis_ddmendpoints.agis.ALL.json
[2026-01-15 09:50:32] drwx------ 5 boinc boinc      4096 Jan 15 09:02 pilot3
[2026-01-15 09:50:32] -rw------- 1 boinc boinc 151161062 Jan 15 09:49 HITS.48215263._043500.pool.root.1
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc       530 Jan 15 09:49 boinc_task_state.xml
[2026-01-15 09:50:32] -rw------- 1 boinc boinc      1024 Jan 15 09:49 memory_monitor_summary.json
[2026-01-15 09:50:32] -rw------- 1 boinc boinc    234618 Jan 15 09:49 log.48215263._043500.job.log.tgz.1
[2026-01-15 09:50:32] -rw------- 1 boinc boinc      7760 Jan 15 09:50 heartbeat.json
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc      8192 Jan 15 09:50 boinc_mmap_file
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc        27 Jan 15 09:50 wrapper_checkpoint.txt
[2026-01-15 09:50:32] -rw------- 1 boinc boinc       746 Jan 15 09:50 pilotlog.txt
[2026-01-15 09:50:32] -rw------- 1 boinc boinc        95 Jan 15 09:50 pilot_heartbeat.json
[2026-01-15 09:50:32] -rw------- 1 boinc boinc    442418 Jan 15 09:50 log.48215263._043500.job.log.1
[2026-01-15 09:50:32] -rw------- 1 boinc boinc       357 Jan 15 09:50 output.list
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc       620 Jan 15 09:50 runtime_log
[2026-01-15 09:50:32] -rw------- 1 boinc boinc    696320 Jan 15 09:50 result.tar.gz
[2026-01-15 09:50:32] -rw------- 1 boinc boinc       657 Jan 15 09:50 zRjLDm0nS08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7mtKDmYYi2Vm.diag
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc      8897 Jan 15 09:50 runtime_log.err
[2026-01-15 09:50:32] -rw-r--r-- 1 boinc boinc     21766 Jan 15 09:50 stderr.txt
[2026-01-15 09:50:32] HITS file was successfully produced:
[2026-01-15 09:50:32] -rw------- 1 boinc boinc 151161062 Jan 15 09:49 shared/HITS.pool.root.1
[2026-01-15 09:50:32]  *** Contents of shared directory: ***
[2026-01-15 09:50:32] total 731612
[2026-01-15 09:50:32] -rw-r--r-- 2 boinc boinc 596689044 Jan 15 09:02 ATLAS.root_0
[2026-01-15 09:50:32] -rw-r--r-- 2 boinc boinc    592404 Jan 15 09:02 input.tar.gz
[2026-01-15 09:50:32] -rw-r--r-- 2 boinc boinc     15847 Jan 15 09:02 start_atlas.sh
[2026-01-15 09:50:32] -rw------- 1 boinc boinc 151161062 Jan 15 09:49 HITS.pool.root.1
[2026-01-15 09:50:32] -rw------- 1 boinc boinc    696320 Jan 15 09:50 result.tar.gz
09:50:34 (832905): run_atlas exited; CPU time 10492.979937
09:50:34 (832905): called boinc_finish(0)

</stderr_txt>
]]>

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