Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:29:10 (497130): wrapper (7.7.26015): starting
22:29:10 (497130): wrapper: running run_atlas (--nthreads 5)
[2026-01-14 22:29:10] Arguments: --nthreads 5
[2026-01-14 22:29:10] Threads: 5
[2026-01-14 22:29:10] Checking for CVMFS
[2026-01-14 22:29:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 22:29:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 22:29:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 22:29:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 22:29:13] 2.13.3.0 497266 0 29732 155158 3 1 4506167 10240000 0 130560 0 0 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2026-01-14 22:29:13] CVMFS is ok
[2026-01-14 22:29:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 22:29:13] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-14 22:29:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-14 22:29:13] Further information can be found at the LHC@home message board.
[2026-01-14 22:29:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 22:29:13] Checking for apptainer binary...
[2026-01-14 22:29:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 22:29:13] Running /usr/bin/apptainer --version
[2026-01-14 22:29:13] apptainer version 1.4.5
[2026-01-14 22:29:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 22:29:13] boinc-cte
[2026-01-14 22:29:13] apptainer works
[2026-01-14 22:29:13] Set ATHENA_PROC_NUMBER=5
[2026-01-14 22:29:13] Set ATHENA_CORE_NUMBER=5
[2026-01-14 22:29:13] Starting ATLAS job with PandaID=6969846158
[2026-01-14 22:29:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 23:15:38]  *** The last 200 lines of the pilot log: ***
[2026-01-14 23:15:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/1f/log.48215263._038824.job.log.tgz.1
[2026-01-14 23:15:38]  workdir=None
[2026-01-14 23:15:38] ]
[2026-01-14 23:15:38] 2026-01-15 07:14:27,469 | INFO     | time since job start (2699s) is within the limit (349056.0s)
[2026-01-14 23:15:38] 2026-01-15 07:14:27,469 | INFO     | transferring file log.48215263._038824.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6969846158/log.48215263._038824.job.log.tgz.1 to /var/lib/boinc
[2026-01-14 23:15:38] 2026-01-15 07:14:27,469 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6969846158/log.48215263._038824.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.482152
[2026-01-14 23:15:38] 2026-01-15 07:14:27,484 | INFO     | adding to output.list: log.48215263._038824.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/1f/log.48215263._038824.job.log.tg
[2026-01-14 23:15:38] 2026-01-15 07:14:27,484 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 23:15:38] 2026-01-15 07:14:27,484 | INFO     | summary of transferred files:
[2026-01-14 23:15:38] 2026-01-15 07:14:27,484 | INFO     |  -- lfn=log.48215263._038824.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 23:15:38] 2026-01-15 07:14:27,484 | INFO     | stage-out finished correctly
[2026-01-14 23:15:38] 2026-01-15 07:14:27,527 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 23:15:38] 2026-01-15 07:14:28,234 | INFO     | monitor loop #211: job 0:6969846158 is in state 'finished'
[2026-01-14 23:15:38] 2026-01-15 07:14:28,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 23:15:38] 2026-01-15 07:14:29,473 | INFO     | time since job start (2701s) is within the limit (349056.0s)
[2026-01-14 23:15:38] 2026-01-15 07:14:29,693 | INFO     | job 6969846158 has state=finished
[2026-01-14 23:15:38] 2026-01-15 07:14:29,693 | INFO     | preparing for final server update for job 6969846158 in state='finished'
[2026-01-14 23:15:38] 2026-01-15 07:14:29,693 | INFO     | this job has now completed (state=finished)
[2026-01-14 23:15:38] 2026-01-15 07:14:29,693 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 23:15:38] 2026-01-15 07:14:29,694 | INFO     | log transfer has been attempted: DONE
[2026-01-14 23:15:38] 2026-01-15 07:14:29,694 | INFO     | job 6969846158 has finished - writing final server update
[2026-01-14 23:15:38] 2026-01-15 07:14:29,694 | INFO     | total number of processed events: 400 (read)
[2026-01-14 23:15:38] 2026-01-15 07:14:29,695 | INFO     | executing command: lscpu
[2026-01-14 23:15:38] 2026-01-15 07:14:29,720 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 23:15:38] 2026-01-15 07:14:30,737 | INFO     | monitor loop #212: job 0:6969846158 is in state 'finished'
[2026-01-14 23:15:38] 2026-01-15 07:14:30,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 23:15:38] 2026-01-15 07:14:31,479 | INFO     | time since job start (2703s) is within the limit (349056.0s)
[2026-01-14 23:15:38] 2026-01-15 07:14:33,243 | INFO     | monitor loop #213: job 0:6969846158 is in state 'finished'
[2026-01-14 23:15:38] 2026-01-15 07:14:33,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 23:15:38] 2026-01-15 07:14:33,483 | INFO     | time since job start (2705s) is within the limit (349056.0s)
[2026-01-14 23:15:38] 2026-01-15 07:14:35,489 | INFO     | time since job start (2707s) is within the limit (349056.0s)
[2026-01-14 23:15:38] 2026-01-15 07:14:35,746 | INFO     | monitor loop #214: job 0:6969846158 is in state 'finished'
[2026-01-14 23:15:38] 2026-01-15 07:14:35,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 23:15:38] 2026-01-15 07:14:37,492 | INFO     | time since job start (2709s) is within the limit (349056.0s)
[2026-01-14 23:15:38] 2026-01-15 07:14:38,247 | INFO     | monitor loop #215: job 0:6969846158 is in state 'finished'
[2026-01-14 23:15:38] 2026-01-15 07:14:38,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 23:15:38] 2026-01-15 07:14:38,776 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-14 23:15:38] 2026-01-15 07:14:38,776 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3800.091
[2026-01-14 23:15:38] 2026-01-15 07:14:38,777 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6969846158/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 23:15:38] 2026-01-15 07:14:38,778 | INFO     | extracted standard info from prmon json
[2026-01-14 23:15:38] 2026-01-15 07:14:38,778 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 23:15:38] 2026-01-15 07:14:38,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 23:15:38] 2026-01-15 07:14:38,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 23:15:38] 2026-01-15 07:14:38,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | fitting pss+swap vs Time
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | sum of square deviations: 15695178.0
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | sum of deviations: -2497566371.0
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | mean x: 1768459996.0
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | mean y: 2796654.5945945946
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | intersect: 281417012821.39404
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | chi2: 0.08186392458414848
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | current memory leak: -159.13 B/s (using 37 data points, chi2=0.08)
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | ..............................
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | . Timing measurements:
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | . get job = 0 s
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | . initial setup = 3 s
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | . payload setup = 5 s
[2026-01-14 23:15:38] 2026-01-15 07:14:38,779 | INFO     | . stage-in = 0 s
[2026-01-14 23:15:38] 2026-01-15 07:14:38,780 | INFO     | . payload execution = 2673 s
[2026-01-14 23:15:38] 2026-01-15 07:14:38,780 | INFO     | . stage-out = 0 s
[2026-01-14 23:15:38] 2026-01-15 07:14:38,780 | INFO     | . log creation = 0 s
[2026-01-14 23:15:38] 2026-01-15 07:14:38,780 | INFO     | ..............................
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | 
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | job summary report
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | --------------------------------------------------
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | PanDA job id: 6969846158
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | task id: 48215263
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | errors: (none)
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | pilot state: finished 
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | transexitcode: 0
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | exeerrorcode: 0
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | exeerrordiag: 
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | exitcode: 0
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | exitmsg: OK
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | cpuconsumptiontime: 12367 s
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | nevents: 400
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | neventsw: 0
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | pid: 507793
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | pgrp: 507793
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | corecount: 5
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | event service: False
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | sizes: {0: 2283986, 4: 2284248, 11: 2284276, 2682: 2309534, 2683: 2309533, 2684: 2318785, 2695: 2318955}
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | --------------------------------------------------
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | 
[2026-01-14 23:15:38] 2026-01-15 07:14:38,823 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-14 23:15:38] 2026-01-15 07:14:38,859 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 23:15:38] 2026-01-15 07:14:38,860 | INFO     | job 6969846158 has completed (purged errors)
[2026-01-14 23:15:38] 2026-01-15 07:14:38,861 | INFO     | overall cleanup function is called
[2026-01-14 23:15:38] 2026-01-15 07:14:39,867 | INFO     | --- collectZombieJob: --- 10, [507793]
[2026-01-14 23:15:38] 2026-01-15 07:14:39,867 | INFO     | zombie collector waiting for pid 507793
[2026-01-14 23:15:38] 2026-01-15 07:14:39,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 23:15:38] 2026-01-15 07:14:39,867 | INFO     | collected zombie processes
[2026-01-14 23:15:38] 2026-01-15 07:14:39,868 | INFO     | will attempt to kill all subprocesses of pid=507793
[2026-01-14 23:15:38] 2026-01-15 07:14:39,900 | INFO     | process IDs to be killed: [507793] (in reverse order)
[2026-01-14 23:15:38] 2026-01-15 07:14:39,938 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 23:15:38] 2026-01-15 07:14:39,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 23:15:38] 2026-01-15 07:14:39,940 | INFO     | did not find any defunct processes belonging to 507793
[2026-01-14 23:15:38] 2026-01-15 07:14:39,941 | INFO     | did not find any defunct processes belonging to 507793
[2026-01-14 23:15:38] 2026-01-15 07:14:39,941 | INFO     | ready for new job
[2026-01-14 23:15:38] 2026-01-15 07:14:39,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 23:15:38] 2026-01-15 07:14:39,942 | INFO     | ***************************************
[2026-01-14 23:15:38] 2026-01-15 07:14:39,942 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 23:15:38] 2026-01-15 07:14:39,942 | INFO     | ***************************************
[2026-01-14 23:15:38] 2026-01-15 07:14:39,942 | INFO     | 
[2026-01-14 23:15:38] 2026-01-15 07:14:39,943 | INFO     | architecture information:
[2026-01-14 23:15:38] 2026-01-15 07:14:39,943 | INFO     | executing command: cat /etc/os-release
[2026-01-14 23:15:38] 2026-01-15 07:14:39,955 | INFO     | cat /etc/os-release:
[2026-01-14 23:15:38] NAME="CentOS Linux"
[2026-01-14 23:15:38] VERSION="7 (Core)"
[2026-01-14 23:15:38] ID="centos"
[2026-01-14 23:15:38] ID_LIKE="rhel fedora"
[2026-01-14 23:15:38] VERSION_ID="7"
[2026-01-14 23:15:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 23:15:38] ANSI_COLOR="0;31"
[2026-01-14 23:15:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 23:15:38] HOME_URL="https://www.centos.org/"
[2026-01-14 23:15:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 23:15:38] 
[2026-01-14 23:15:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 23:15:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 23:15:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 23:15:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 23:15:38] 
[2026-01-14 23:15:38] 2026-01-15 07:14:39,955 | INFO     | ***************************************
[2026-01-14 23:15:38] 2026-01-15 07:14:40,458 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-14 23:15:38] 2026-01-15 07:14:40,476 | INFO     | sufficient remaining disk space (41517318144 B)
[2026-01-14 23:15:38] 2026-01-15 07:14:40,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 23:15:38] 2026-01-15 07:14:40,476 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 23:15:38] 2026-01-15 07:14:40,476 | INFO     | update_server=False
[2026-01-14 23:15:38] 2026-01-15 07:14:40,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 23:15:38] 2026-01-15 07:14:40,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 23:15:38] 2026-01-15 07:14:40,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 23:15:38] 2026-01-15 07:14:40,751 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 23:15:38] 2026-01-15 07:14:40,751 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 23:15:38] 2026-01-15 07:14:40,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 23:15:38] 2026-01-15 07:14:40,751 | INFO     | will abort loop
[2026-01-14 23:15:38] 2026-01-15 07:14:41,070 | INFO     | all payload control threads have been joined
[2026-01-14 23:15:38] 2026-01-15 07:14:41,254 | INFO     | all data control threads have been joined
[2026-01-14 23:15:38] 2026-01-15 07:14:41,479 | INFO     | [job] queue monitor thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:41,482 | INFO     | [job] retrieve thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:41,545 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:41,662 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:41,756 | INFO     | [job] job monitor thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:41,770 | INFO     | [payload] validate_post thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:41,968 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:42,076 | INFO     | [payload] control thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:42,175 | INFO     | all job control threads have been joined
[2026-01-14 23:15:38] 2026-01-15 07:14:42,260 | INFO     | [data] control thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:42,532 | INFO     | [payload] failed_post thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:42,547 | INFO     | [data] copytool_out thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:42,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 23:15:38] 2026-01-15 07:14:42,653 | INFO     | [data] copytool_in thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:42,827 | INFO     | [job] validate thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:43,179 | INFO     | [job] control thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:46,585 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:14:50,731 | INFO     | job.realtimelogging is not enabled
[2026-01-14 23:15:38] 2026-01-15 07:14:51,737 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 23:15:38] 2026-01-15 07:15:10,614 | INFO     | PID=501354 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-14 23:15:38] 2026-01-15 07:15:10,614 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 23:15:38] 2026-01-15 07:15:10,614 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 23:15:38] 2026-01-15 07:15:10,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 23:15:38] 2026-01-15 07:15:31,808 | INFO     | [monitor] cgroup control has ended
[2026-01-14 23:15:38] 2026-01-15 07:15:32,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140186306443072)>', '<ExcThread(monitor, started 140185350158080)>']
[2026-01-14 23:15:38] 2026-01-15 07:15:32,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 23:15:38] 2026-01-15 07:15:32,710 | INFO     | [monitor] control thread has ended
[2026-01-14 23:15:38] 2026-01-15 07:15:37,295 | INFO     | all workflow threads have been joined
[2026-01-14 23:15:38] 2026-01-15 07:15:37,295 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 23:15:38] 2026-01-15 07:15:37,296 | INFO     | traces error code: 0
[2026-01-14 23:15:38] 2026-01-15 07:15:37,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 23:15:38] 2026-01-15 07:15:38,181 [wrapper] ==== pilot stdout END ====
[2026-01-14 23:15:38] 2026-01-15 07:15:38,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 23:15:38] 2026-01-15 07:15:38,187 [wrapper] pilotpid: 501354
[2026-01-14 23:15:38] 2026-01-15 07:15:38,190 [wrapper] Pilot exit status: 0
[2026-01-14 23:15:38] 2026-01-15 07:15:38,207 [wrapper] pandaids: 6969846158
[2026-01-14 23:15:38] 2026-01-15 07:15:38,229 [wrapper] cleanup supervisor_pilot  516761 501355
[2026-01-14 23:15:38] 2026-01-15 07:15:38,234 [wrapper] Test setup, not cleaning
[2026-01-14 23:15:38] 2026-01-15 07:15:38,237 [wrapper] apfmon messages muted
[2026-01-14 23:15:38] 2026-01-15 07:15:38,240 [wrapper] ==== wrapper stdout END ====
[2026-01-14 23:15:38] 2026-01-15 07:15:38,242 [wrapper] ==== wrapper stderr END ====
[2026-01-14 23:15:38]  *** Error codes and diagnostics ***
[2026-01-14 23:15:38]     "exeErrorCode": 0,
[2026-01-14 23:15:38]     "exeErrorDiag": "",
[2026-01-14 23:15:38]     "pilotErrorCode": 0,
[2026-01-14 23:15:38]     "pilotErrorDiag": "",
[2026-01-14 23:15:38]  *** Listing of results directory ***
[2026-01-14 23:15:38] total 725052
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc    579449 Jan 14 15:30 pilot3.tar.gz
[2026-01-14 23:15:38] -rwx------ 1 boinc boinc     36322 Jan 14 15:32 runpilot2-wrapper.sh
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc      5112 Jan 14 15:35 queuedata.json
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc       100 Jan 14 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 23:15:38] -rwxr-xr-x 1 boinc boinc      7986 Jan 14 22:29 run_atlas
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc       105 Jan 14 22:29 job.xml
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc      6589 Jan 14 22:29 init_data.xml
[2026-01-14 23:15:38] -rw-r--r-- 2 boinc boinc 589363208 Jan 14 22:29 EVNT.32794306._001549.pool.root.1
[2026-01-14 23:15:38] -rw-r--r-- 2 boinc boinc     15847 Jan 14 22:29 start_atlas.sh
[2026-01-14 23:15:38] drwxrwx--x 2 boinc boinc      4096 Jan 14 22:29 shared
[2026-01-14 23:15:38] -rw-r--r-- 2 boinc boinc    592402 Jan 14 22:29 input.tar.gz
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc         0 Jan 14 22:29 boinc_lockfile
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc      2508 Jan 14 22:29 pandaJob.out
[2026-01-14 23:15:38] -rw------- 1 boinc boinc    999472 Jan 14 22:29 agis_schedconf.cvmfs.json
[2026-01-14 23:15:38] -rw------- 1 boinc boinc   1516246 Jan 14 22:29 agis_ddmendpoints.agis.ALL.json
[2026-01-14 23:15:38] drwx------ 5 boinc boinc      4096 Jan 14 22:29 pilot3
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc       530 Jan 14 23:14 boinc_task_state.xml
[2026-01-14 23:15:38] -rw------- 1 boinc boinc 147781990 Jan 14 23:14 HITS.48215263._038824.pool.root.1
[2026-01-14 23:15:38] -rw------- 1 boinc boinc      1023 Jan 14 23:14 memory_monitor_summary.json
[2026-01-14 23:15:38] -rw------- 1 boinc boinc    266309 Jan 14 23:14 log.48215263._038824.job.log.tgz.1
[2026-01-14 23:15:38] -rw------- 1 boinc boinc        95 Jan 14 23:14 pilot_heartbeat.json
[2026-01-14 23:15:38] -rw------- 1 boinc boinc      7746 Jan 14 23:14 heartbeat.json
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc        27 Jan 14 23:15 wrapper_checkpoint.txt
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc      8192 Jan 14 23:15 boinc_mmap_file
[2026-01-14 23:15:38] -rw------- 1 boinc boinc      5012 Jan 14 23:15 pilotlog.txt
[2026-01-14 23:15:38] -rw------- 1 boinc boinc    424785 Jan 14 23:15 log.48215263._038824.job.log.1
[2026-01-14 23:15:38] -rw------- 1 boinc boinc       357 Jan 14 23:15 output.list
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc       620 Jan 14 23:15 runtime_log
[2026-01-14 23:15:38] -rw------- 1 boinc boinc    706560 Jan 14 23:15 result.tar.gz
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc      8919 Jan 14 23:15 runtime_log.err
[2026-01-14 23:15:38] -rw------- 1 boinc boinc       644 Jan 14 23:15 aqgKDmVWP08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmO4mKDm9zpnzn.diag
[2026-01-14 23:15:38] -rw-r--r-- 1 boinc boinc     22382 Jan 14 23:15 stderr.txt
[2026-01-14 23:15:38] HITS file was successfully produced:
[2026-01-14 23:15:38] -rw------- 1 boinc boinc 147781990 Jan 14 23:14 shared/HITS.pool.root.1
[2026-01-14 23:15:38]  *** Contents of shared directory: ***
[2026-01-14 23:15:38] total 721168
[2026-01-14 23:15:38] -rw-r--r-- 2 boinc boinc 589363208 Jan 14 22:29 ATLAS.root_0
[2026-01-14 23:15:38] -rw-r--r-- 2 boinc boinc     15847 Jan 14 22:29 start_atlas.sh
[2026-01-14 23:15:38] -rw-r--r-- 2 boinc boinc    592402 Jan 14 22:29 input.tar.gz
[2026-01-14 23:15:38] -rw------- 1 boinc boinc 147781990 Jan 14 23:14 HITS.pool.root.1
[2026-01-14 23:15:38] -rw------- 1 boinc boinc    706560 Jan 14 23:15 result.tar.gz
23:15:39 (497130): run_atlas exited; CPU time 12380.074176
23:15:39 (497130): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN