Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:40:46 (5481): wrapper (7.7.26015): starting
00:40:46 (5481): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 00:40:46] Arguments: --nthreads 8
[2026-01-15 00:40:46] Threads: 8
[2026-01-15 00:40:46] Checking for CVMFS
[2026-01-15 00:40:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 00:40:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 00:40:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 00:40:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 00:40:46] 2.11.2.0 2827 114671 82040 155157 0 59 19058716 20275200 1 130560 0 23691097 99.750 7814580 30058 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 00:40:46] CVMFS is ok
[2026-01-15 00:40:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 00:40:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 00:40:46] Further information can be found at the LHC@home message board.
[2026-01-15 00:40:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 00:40:46] Checking for apptainer binary...
[2026-01-15 00:40:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 00:40:46] Running /usr/bin/apptainer --version
[2026-01-15 00:40:46] apptainer version 1.3.2-1.el7
[2026-01-15 00:40:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 00:40:48] c-204-30.aglt2.org
[2026-01-15 00:40:48] apptainer works
[2026-01-15 00:40:48] Set ATHENA_PROC_NUMBER=8
[2026-01-15 00:40:48] Set ATHENA_CORE_NUMBER=8
[2026-01-15 00:40:48] Starting ATLAS job with PandaID=6970285742
[2026-01-15 00:40:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 02:01:23]  *** The last 200 lines of the pilot log: ***
[2026-01-15 02:01:23]  workdir=None
[2026-01-15 02:01:23] ]
[2026-01-15 02:01:23] 2026-01-15 07:00:23,414 | INFO     | transferring file log.48215263._043667.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6970285742/log.48215263._043667.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 02:01:23] 2026-01-15 07:00:23,414 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6970285742/log.48215263._043667.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._043667.job
[2026-01-15 02:01:23] 2026-01-15 07:00:23,440 | INFO     | adding to output.list: log.48215263._043667.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/91/log.48215263._043667.job.log.tg
[2026-01-15 02:01:23] 2026-01-15 07:00:23,442 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 02:01:23] 2026-01-15 07:00:23,442 | INFO     | summary of transferred files:
[2026-01-15 02:01:23] 2026-01-15 07:00:23,442 | INFO     |  -- lfn=log.48215263._043667.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 02:01:23] 2026-01-15 07:00:23,442 | INFO     | stage-out finished correctly
[2026-01-15 02:01:23] 2026-01-15 07:00:23,535 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 02:01:23] 2026-01-15 07:00:24,042 | INFO     | time since job start (4753s) is within the limit (349056.0s)
[2026-01-15 02:01:23] 2026-01-15 07:00:24,083 | WARNING  | process 15687 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 02:01:23] 2026-01-15 07:00:24,083 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970285742/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 02:01:23] 2026-01-15 07:00:24,169 | INFO     | number of running child processes to parent process 15687: 1
[2026-01-15 02:01:23] 2026-01-15 07:00:24,169 | INFO     | maximum number of monitored processes: 6
[2026-01-15 02:01:23] 2026-01-15 07:00:26,045 | INFO     | time since job start (4755s) is within the limit (349056.0s)
[2026-01-15 02:01:23] 2026-01-15 07:00:26,553 | INFO     | job 6970285742 has state=finished
[2026-01-15 02:01:23] 2026-01-15 07:00:26,553 | INFO     | preparing for final server update for job 6970285742 in state='finished'
[2026-01-15 02:01:23] 2026-01-15 07:00:26,554 | INFO     | this job has now completed (state=finished)
[2026-01-15 02:01:23] 2026-01-15 07:00:26,554 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 02:01:23] 2026-01-15 07:00:26,554 | INFO     | log transfer has been attempted: DONE
[2026-01-15 02:01:23] 2026-01-15 07:00:26,554 | INFO     | job 6970285742 has finished - writing final server update
[2026-01-15 02:01:23] 2026-01-15 07:00:26,555 | INFO     | total number of processed events: 400 (read)
[2026-01-15 02:01:23] 2026-01-15 07:00:26,556 | INFO     | executing command: lscpu
[2026-01-15 02:01:23] 2026-01-15 07:00:26,673 | INFO     | monitor loop #352: job 0:6970285742 is in state 'finished'
[2026-01-15 02:01:23] 2026-01-15 07:00:26,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 02:01:23] 2026-01-15 07:00:26,791 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 02:01:23] 2026-01-15 07:00:28,050 | INFO     | time since job start (4757s) is within the limit (349056.0s)
[2026-01-15 02:01:23] 2026-01-15 07:00:29,176 | INFO     | monitor loop #353: job 0:6970285742 is in state 'finished'
[2026-01-15 02:01:23] 2026-01-15 07:00:29,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 02:01:23] 2026-01-15 07:00:30,056 | INFO     | time since job start (4759s) is within the limit (349056.0s)
[2026-01-15 02:01:23] 2026-01-15 07:00:31,177 | INFO     | PID=9241 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-15 02:01:23] 2026-01-15 07:00:31,679 | INFO     | monitor loop #354: job 0:6970285742 is in state 'finished'
[2026-01-15 02:01:23] 2026-01-15 07:00:31,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 02:01:23] 2026-01-15 07:00:32,178 | INFO     | time since job start (4761s) is within the limit (349056.0s)
[2026-01-15 02:01:23] 2026-01-15 07:00:34,182 | INFO     | monitor loop #355: job 0:6970285742 is in state 'finished'
[2026-01-15 02:01:23] 2026-01-15 07:00:34,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 02:01:23] 2026-01-15 07:00:34,185 | INFO     | time since job start (4763s) is within the limit (349056.0s)
[2026-01-15 02:01:23] 2026-01-15 07:00:35,408 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 02:01:23] 2026-01-15 07:00:35,411 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-15 02:01:23] 2026-01-15 07:00:35,413 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970285742/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 02:01:23] 2026-01-15 07:00:35,414 | INFO     | extracted standard info from prmon json
[2026-01-15 02:01:23] 2026-01-15 07:00:35,414 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 02:01:23] 2026-01-15 07:00:35,414 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 02:01:23] 2026-01-15 07:00:35,415 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 02:01:23] 2026-01-15 07:00:35,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 02:01:23] 2026-01-15 07:00:35,417 | INFO     | fitting pss+swap vs Time
[2026-01-15 02:01:23] 2026-01-15 07:00:35,418 | INFO     | sum of square deviations: 110960220.0
[2026-01-15 02:01:23] 2026-01-15 07:00:35,418 | INFO     | sum of deviations: -9543755000.000002
[2026-01-15 02:01:23] 2026-01-15 07:00:35,418 | INFO     | mean x: 1768458148.0
[2026-01-15 02:01:23] 2026-01-15 07:00:35,419 | INFO     | mean y: 2664159.436619718
[2026-01-15 02:01:23] 2026-01-15 07:00:35,419 | INFO     | intersect: 152108808976.6129
[2026-01-15 02:01:23] 2026-01-15 07:00:35,419 | INFO     | chi2: 0.08200484309933913
[2026-01-15 02:01:23] 2026-01-15 07:00:35,419 | INFO     | current memory leak: -86.01 B/s (using 71 data points, chi2=0.08)
[2026-01-15 02:01:23] 2026-01-15 07:00:35,420 | INFO     | could have reported an average CPU frequency of 1895 MHz (6 samples)
[2026-01-15 02:01:23] 2026-01-15 07:00:35,420 | INFO     | ..............................
[2026-01-15 02:01:23] 2026-01-15 07:00:35,420 | INFO     | . Timing measurements:
[2026-01-15 02:01:23] 2026-01-15 07:00:35,420 | INFO     | . get job = 0 s
[2026-01-15 02:01:23] 2026-01-15 07:00:35,420 | INFO     | . initial setup = 2 s
[2026-01-15 02:01:23] 2026-01-15 07:00:35,421 | INFO     | . payload setup = 9 s
[2026-01-15 02:01:23] 2026-01-15 07:00:35,421 | INFO     | . stage-in = 0 s
[2026-01-15 02:01:23] 2026-01-15 07:00:35,421 | INFO     | . payload execution = 4716 s
[2026-01-15 02:01:23] 2026-01-15 07:00:35,421 | INFO     | . stage-out = 0 s
[2026-01-15 02:01:23] 2026-01-15 07:00:35,421 | INFO     | . log creation = 0 s
[2026-01-15 02:01:23] 2026-01-15 07:00:35,421 | INFO     | ..............................
[2026-01-15 02:01:23] 2026-01-15 07:00:35,569 | INFO     | 
[2026-01-15 02:01:23] 2026-01-15 07:00:35,570 | INFO     | job summary report
[2026-01-15 02:01:23] 2026-01-15 07:00:35,570 | INFO     | --------------------------------------------------
[2026-01-15 02:01:23] 2026-01-15 07:00:35,570 | INFO     | PanDA job id: 6970285742
[2026-01-15 02:01:23] 2026-01-15 07:00:35,570 | INFO     | task id: 48215263
[2026-01-15 02:01:23] 2026-01-15 07:00:35,570 | INFO     | errors: (none)
[2026-01-15 02:01:23] 2026-01-15 07:00:35,570 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 02:01:23] 2026-01-15 07:00:35,571 | INFO     | pilot state: finished 
[2026-01-15 02:01:23] 2026-01-15 07:00:35,571 | INFO     | transexitcode: 0
[2026-01-15 02:01:23] 2026-01-15 07:00:35,571 | INFO     | exeerrorcode: 0
[2026-01-15 02:01:23] 2026-01-15 07:00:35,571 | INFO     | exeerrordiag: 
[2026-01-15 02:01:23] 2026-01-15 07:00:35,571 | INFO     | exitcode: 0
[2026-01-15 02:01:23] 2026-01-15 07:00:35,571 | INFO     | exitmsg: OK
[2026-01-15 02:01:23] 2026-01-15 07:00:35,572 | INFO     | cpuconsumptiontime: 34424 s
[2026-01-15 02:01:23] 2026-01-15 07:00:35,572 | INFO     | nevents: 400
[2026-01-15 02:01:23] 2026-01-15 07:00:35,572 | INFO     | neventsw: 0
[2026-01-15 02:01:23] 2026-01-15 07:00:35,572 | INFO     | pid: 15687
[2026-01-15 02:01:23] 2026-01-15 07:00:35,572 | INFO     | pgrp: 15687
[2026-01-15 02:01:23] 2026-01-15 07:00:35,572 | INFO     | corecount: 8
[2026-01-15 02:01:23] 2026-01-15 07:00:35,573 | INFO     | event service: False
[2026-01-15 02:01:23] 2026-01-15 07:00:35,573 | INFO     | sizes: {0: 2283898, 6: 2284160, 11: 2284188, 4730: 2310345, 4733: 2319399, 4745: 2319537}
[2026-01-15 02:01:23] 2026-01-15 07:00:35,573 | INFO     | --------------------------------------------------
[2026-01-15 02:01:23] 2026-01-15 07:00:35,573 | INFO     | 
[2026-01-15 02:01:23] 2026-01-15 07:00:35,573 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 02:01:23] 2026-01-15 07:00:35,602 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,603 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,603 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,603 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,605 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,605 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,605 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,606 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 02:01:23] 2026-01-15 07:00:35,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,606 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 02:01:23] 2026-01-15 07:00:35,606 | INFO     | job 6970285742 has completed (purged errors)
[2026-01-15 02:01:23] 2026-01-15 07:00:35,606 | INFO     | overall cleanup function is called
[2026-01-15 02:01:23] 2026-01-15 07:00:36,615 | INFO     | --- collectZombieJob: --- 10, [15687]
[2026-01-15 02:01:23] 2026-01-15 07:00:36,784 | INFO     | zombie collector waiting for pid 15687
[2026-01-15 02:01:23] 2026-01-15 07:00:36,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 02:01:23] 2026-01-15 07:00:36,784 | INFO     | collected zombie processes
[2026-01-15 02:01:23] 2026-01-15 07:00:36,784 | INFO     | will attempt to kill all subprocesses of pid=15687
[2026-01-15 02:01:23] 2026-01-15 07:00:36,876 | INFO     | process IDs to be killed: [15687] (in reverse order)
[2026-01-15 02:01:23] 2026-01-15 07:00:36,945 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 02:01:23] 2026-01-15 07:00:36,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 02:01:23] 2026-01-15 07:00:36,951 | INFO     | did not find any defunct processes belonging to 15687
[2026-01-15 02:01:23] 2026-01-15 07:00:36,954 | INFO     | did not find any defunct processes belonging to 15687
[2026-01-15 02:01:23] 2026-01-15 07:00:36,954 | INFO     | ready for new job
[2026-01-15 02:01:23] 2026-01-15 07:00:36,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 02:01:23] 2026-01-15 07:00:36,956 | INFO     | ***************************************
[2026-01-15 02:01:23] 2026-01-15 07:00:36,956 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 02:01:23] 2026-01-15 07:00:36,957 | INFO     | ***************************************
[2026-01-15 02:01:23] 2026-01-15 07:00:36,957 | INFO     | 
[2026-01-15 02:01:23] 2026-01-15 07:00:36,957 | INFO     | architecture information:
[2026-01-15 02:01:23] 2026-01-15 07:00:36,958 | INFO     | executing command: cat /etc/os-release
[2026-01-15 02:01:23] 2026-01-15 07:00:36,978 | INFO     | cat /etc/os-release:
[2026-01-15 02:01:23] NAME="CentOS Linux"
[2026-01-15 02:01:23] VERSION="7 (Core)"
[2026-01-15 02:01:23] ID="centos"
[2026-01-15 02:01:23] ID_LIKE="rhel fedora"
[2026-01-15 02:01:23] VERSION_ID="7"
[2026-01-15 02:01:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 02:01:23] ANSI_COLOR="0;31"
[2026-01-15 02:01:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 02:01:23] HOME_URL="https://www.centos.org/"
[2026-01-15 02:01:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 02:01:23] 
[2026-01-15 02:01:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 02:01:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 02:01:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 02:01:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 02:01:23] 
[2026-01-15 02:01:23] 2026-01-15 07:00:36,978 | INFO     | ***************************************
[2026-01-15 02:01:23] 2026-01-15 07:00:37,481 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 02:01:23] 2026-01-15 07:00:37,502 | INFO     | sufficient remaining disk space (17832083456 B)
[2026-01-15 02:01:23] 2026-01-15 07:00:37,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 02:01:23] 2026-01-15 07:00:37,503 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 02:01:23] 2026-01-15 07:00:37,504 | INFO     | update_server=False
[2026-01-15 02:01:23] 2026-01-15 07:00:37,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 02:01:23] 2026-01-15 07:00:37,504 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 02:01:23] 2026-01-15 07:00:37,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 02:01:23] 2026-01-15 07:00:37,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 02:01:23] 2026-01-15 07:00:37,691 | INFO     | aborting loop
[2026-01-15 02:01:23] 2026-01-15 07:00:38,509 | INFO     | [job] retrieve thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:38,510 | INFO     | [job] queue monitor thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:38,544 | INFO     | all data control threads have been joined
[2026-01-15 02:01:23] 2026-01-15 07:00:38,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 02:01:23] 2026-01-15 07:00:38,696 | INFO     | [job] job monitor thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:38,830 | INFO     | all payload control threads have been joined
[2026-01-15 02:01:23] 2026-01-15 07:00:39,013 | INFO     | all job control threads have been joined
[2026-01-15 02:01:23] 2026-01-15 07:00:39,071 | INFO     | [data] copytool_in thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:39,267 | INFO     | [payload] failed_post thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:39,417 | INFO     | [job] validate thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:39,510 | INFO     | [data] copytool_out thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:39,550 | INFO     | [data] control thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:39,577 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:39,835 | INFO     | [payload] control thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:39,873 | INFO     | [payload] validate_post thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:39,965 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:39,983 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:40,019 | INFO     | [job] control thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:42,637 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:00:48,173 | INFO     | job.realtimelogging is not enabled
[2026-01-15 02:01:23] 2026-01-15 07:00:49,179 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 02:01:23] 2026-01-15 07:01:07,404 | INFO     | PID=9241 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-15 02:01:23] 2026-01-15 07:01:07,405 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 02:01:23] 2026-01-15 07:01:07,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 02:01:23] 2026-01-15 07:01:07,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 02:01:23] 2026-01-15 07:01:18,403 | INFO     | [monitor] cgroup control has ended
[2026-01-15 02:01:23] 2026-01-15 07:01:18,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140450708236096)>', '<ExcThread(monitor, started 140449893299968)>']
[2026-01-15 02:01:23] 2026-01-15 07:01:19,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 02:01:23] 2026-01-15 07:01:19,458 | INFO     | [monitor] control thread has ended
[2026-01-15 02:01:23] 2026-01-15 07:01:23,507 | INFO     | all workflow threads have been joined
[2026-01-15 02:01:23] 2026-01-15 07:01:23,508 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 02:01:23] 2026-01-15 07:01:23,513 | INFO     | traces error code: 0
[2026-01-15 02:01:23] 2026-01-15 07:01:23,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 02:01:23] 2026-01-15 07:01:23,631 [wrapper] ==== pilot stdout END ====
[2026-01-15 02:01:23] 2026-01-15 07:01:23,636 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 02:01:23] 2026-01-15 07:01:23,641 [wrapper] pilotpid: 9241
[2026-01-15 02:01:23] 2026-01-15 07:01:23,646 [wrapper] Pilot exit status: 0
[2026-01-15 02:01:23] 2026-01-15 07:01:23,666 [wrapper] pandaids: 6970285742
[2026-01-15 02:01:23] 2026-01-15 07:01:23,717 [wrapper] cleanup supervisor_pilot 20165 9242
[2026-01-15 02:01:23] 2026-01-15 07:01:23,722 [wrapper] Test setup, not cleaning
[2026-01-15 02:01:23] 2026-01-15 07:01:23,727 [wrapper] apfmon messages muted
[2026-01-15 02:01:23] 2026-01-15 07:01:23,731 [wrapper] ==== wrapper stdout END ====
[2026-01-15 02:01:23] 2026-01-15 07:01:23,736 [wrapper] ==== wrapper stderr END ====
[2026-01-15 02:01:23]  *** Error codes and diagnostics ***
[2026-01-15 02:01:23]     "exeErrorCode": 0,
[2026-01-15 02:01:23]     "exeErrorDiag": "",
[2026-01-15 02:01:23]     "pilotErrorCode": 0,
[2026-01-15 02:01:23]     "pilotErrorDiag": "",
[2026-01-15 02:01:23]  *** Listing of results directory ***
[2026-01-15 02:01:23] total 729480
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 22:00 queuedata.json
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 22:00 pilot3.tar.gz
[2026-01-15 02:01:23] -rwx------ 1 boincer umatlas     36322 Jan 14 22:00 runpilot2-wrapper.sh
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas       100 Jan 15 00:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 02:01:23] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 00:40 run_atlas
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas       105 Jan 15 00:40 job.xml
[2026-01-15 02:01:23] -rw-r--r-- 2 boincer umatlas 594460381 Jan 15 00:40 EVNT.32794306._000945.pool.root.1
[2026-01-15 02:01:23] drwxrwx--x 2 boincer umatlas      4096 Jan 15 00:40 shared
[2026-01-15 02:01:23] -rw-r--r-- 2 boincer umatlas    592408 Jan 15 00:40 input.tar.gz
[2026-01-15 02:01:23] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 00:40 start_atlas.sh
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas         0 Jan 15 00:40 boinc_lockfile
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas      2507 Jan 15 00:40 pandaJob.out
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas        57 Jan 15 00:40 setup.sh.local
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas    999472 Jan 15 00:41 agis_schedconf.cvmfs.json
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas   1516246 Jan 15 00:41 agis_ddmendpoints.agis.ALL.json
[2026-01-15 02:01:23] drwx------ 5 boincer umatlas      4096 Jan 15 00:41 pilot3
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas      5910 Jan 15 01:54 init_data.xml
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas       530 Jan 15 01:59 boinc_task_state.xml
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas 146604604 Jan 15 01:59 HITS.48215263._043667.pool.root.1
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas      1046 Jan 15 02:00 memory_monitor_summary.json
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas    312836 Jan 15 02:00 log.48215263._043667.job.log.tgz.1
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas        95 Jan 15 02:00 pilot_heartbeat.json
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas      7841 Jan 15 02:00 heartbeat.json
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 02:01 boinc_mmap_file
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas        27 Jan 15 02:01 wrapper_checkpoint.txt
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas      4817 Jan 15 02:01 pilotlog.txt
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas    680231 Jan 15 02:01 log.48215263._043667.job.log.1
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas       357 Jan 15 02:01 output.list
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas       620 Jan 15 02:01 runtime_log
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas   1013760 Jan 15 02:01 result.tar.gz
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas      9342 Jan 15 02:01 runtime_log.err
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas       658 Jan 15 02:01 Nj9MDmWmS08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSYnKDmvwE3Po.diag
[2026-01-15 02:01:23] -rw-r--r-- 1 boincer umatlas     22399 Jan 15 02:01 stderr.txt
[2026-01-15 02:01:23] HITS file was successfully produced:
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas 146604604 Jan 15 01:59 shared/HITS.pool.root.1
[2026-01-15 02:01:23]  *** Contents of shared directory: ***
[2026-01-15 02:01:23] total 725296
[2026-01-15 02:01:23] -rw-r--r-- 2 boincer umatlas 594460381 Jan 15 00:40 ATLAS.root_0
[2026-01-15 02:01:23] -rw-r--r-- 2 boincer umatlas    592408 Jan 15 00:40 input.tar.gz
[2026-01-15 02:01:23] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 00:40 start_atlas.sh
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas 146604604 Jan 15 01:59 HITS.pool.root.1
[2026-01-15 02:01:23] -rw------- 1 boincer umatlas   1013760 Jan 15 02:01 result.tar.gz
02:01:25 (5481): run_atlas exited; CPU time 34371.351381
02:01:25 (5481): called boinc_finish(0)

</stderr_txt>
]]>

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