Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:47 (1012666): wrapper (7.7.26015): starting
00:05:47 (1012666): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 00:05:47] Arguments: --nthreads 9
[2026-01-15 00:05:47] Threads: 9
[2026-01-15 00:05:47] Checking for CVMFS
[2026-01-15 00:05:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 00:05:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 00:05:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 00:05:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 00:05:53] 2.13.3.0 13009 38274 253240 155156 2 201 31610339 32935937 30453 16776704 0 39670324 99.656 42444305 15301 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 00:05:53] CVMFS is ok
[2026-01-15 00:05:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 00:05:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 00:05:53] Further information can be found at the LHC@home message board.
[2026-01-15 00:05:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 00:05:53] Checking for apptainer binary...
[2026-01-15 00:05:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 00:05:53] Running /usr/bin/apptainer --version
[2026-01-15 00:05:53] apptainer version 1.4.5-2.el9
[2026-01-15 00:05:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 00:05:55] c6-12-25-2.aglt2.org
[2026-01-15 00:05:55] apptainer works
[2026-01-15 00:05:55] Set ATHENA_PROC_NUMBER=9
[2026-01-15 00:05:55] Set ATHENA_CORE_NUMBER=9
[2026-01-15 00:05:55] Starting ATLAS job with PandaID=6969724924
[2026-01-15 00:05:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:38:20 (2025358): wrapper (7.7.26015): starting
05:38:20 (2025358): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 05:38:20] Arguments: --nthreads 8
[2026-01-15 05:38:20] Threads: 8
[2026-01-15 05:38:20] This job has been restarted, cleaning up previous attempt
[2026-01-15 05:38:20] Checking for CVMFS
[2026-01-15 05:38:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 05:38:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 05:38:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 05:38:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 05:38:21] 2.13.3.0 13009 38607 252384 155165 3 138 17467400 32935936 26034 16776704 0 40695453 99.658 42968794 15212 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 05:38:21] CVMFS is ok
[2026-01-15 05:38:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 05:38:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 05:38:21] Further information can be found at the LHC@home message board.
[2026-01-15 05:38:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 05:38:21] Checking for apptainer binary...
[2026-01-15 05:38:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 05:38:21] Running /usr/bin/apptainer --version
[2026-01-15 05:38:21] apptainer version 1.4.5-2.el9
[2026-01-15 05:38:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 05:38:21] c6-12-25-2.aglt2.org
[2026-01-15 05:38:21] apptainer works
[2026-01-15 05:38:21] Set ATHENA_PROC_NUMBER=8
[2026-01-15 05:38:21] Set ATHENA_CORE_NUMBER=8
[2026-01-15 05:38:21] Starting ATLAS job with PandaID=6969724924
[2026-01-15 05:38:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 16:11:14]  *** The last 200 lines of the pilot log: ***
[2026-01-15 16:11:14] 2026-01-15 21:09:56,713 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6969724924/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 16:11:14] 2026-01-15 21:09:56,791 | INFO     | extracted standard info from prmon json
[2026-01-15 16:11:14] 2026-01-15 21:09:56,792 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 16:11:14] 2026-01-15 21:09:56,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 16:11:14] 2026-01-15 21:09:56,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 16:11:14] 2026-01-15 21:09:56,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 16:11:14] 2026-01-15 21:09:57,101 | INFO     | fitting pss+swap vs Time
[2026-01-15 16:11:14] 2026-01-15 21:09:57,103 | INFO     | sum of square deviations: 73548179137.32797
[2026-01-15 16:11:14] 2026-01-15 21:09:57,177 | INFO     | sum of deviations: 38904896373.455635
[2026-01-15 16:11:14] 2026-01-15 21:09:57,177 | INFO     | mean x: 1768492450.1373184
[2026-01-15 16:11:14] 2026-01-15 21:09:57,177 | INFO     | mean y: 2560778.382875606
[2026-01-15 16:11:14] 2026-01-15 21:09:57,178 | INFO     | intersect: -932921463.5549316
[2026-01-15 16:11:14] 2026-01-15 21:09:57,180 | INFO     | chi2: 4.960373826183718
[2026-01-15 16:11:14] 2026-01-15 21:09:57,194 | INFO     | sum of square deviations: 71780462111.1727
[2026-01-15 16:11:14] 2026-01-15 21:09:57,362 | INFO     | sum of deviations: 197427242597.35843
[2026-01-15 16:11:14] 2026-01-15 21:09:57,363 | INFO     | mean x: 1768492297.6416938
[2026-01-15 16:11:14] 2026-01-15 21:09:57,363 | INFO     | mean y: 2574430.5016286643
[2026-01-15 16:11:14] 2026-01-15 21:09:57,363 | INFO     | intersect: -4861542456.030942
[2026-01-15 16:11:14] 2026-01-15 21:09:57,375 | INFO     | chi2: 2.153232905637341
[2026-01-15 16:11:14] 2026-01-15 21:09:57,380 | INFO     | current chi2=2.153232905637341 (change=56.591317890773986 %)
[2026-01-15 16:11:14] 2026-01-15 21:09:57,382 | INFO     | sum of square deviations: 70041078671.68787
[2026-01-15 16:11:14] 2026-01-15 21:09:57,680 | INFO     | sum of deviations: 195402660751.09036
[2026-01-15 16:11:14] 2026-01-15 21:09:57,681 | INFO     | mean x: 1768492145.136289
[2026-01-15 16:11:14] 2026-01-15 21:09:57,681 | INFO     | mean y: 2574252.986863711
[2026-01-15 16:11:14] 2026-01-15 21:09:57,681 | INFO     | intersect: -4931217133.877091
[2026-01-15 16:11:14] 2026-01-15 21:09:57,760 | INFO     | chi2: 2.153336407359795
[2026-01-15 16:11:14] 2026-01-15 21:09:57,760 | INFO     | current chi2=2.153336407359795 (change=-0.004806805719112657 %)
[2026-01-15 16:11:14] 2026-01-15 21:09:57,761 | INFO     | right removable region: 608
[2026-01-15 16:11:14] 2026-01-15 21:09:57,763 | INFO     | sum of square deviations: 71780145218.3087
[2026-01-15 16:11:14] 2026-01-15 21:09:57,934 | INFO     | sum of deviations: -94024834352.42183
[2026-01-15 16:11:14] 2026-01-15 21:09:57,934 | INFO     | mean x: 1768492602.6465797
[2026-01-15 16:11:14] 2026-01-15 21:09:57,935 | INFO     | mean y: 2572217.9657980455
[2026-01-15 16:11:14] 2026-01-15 21:09:57,935 | INFO     | intersect: 2319121223.426921
[2026-01-15 16:11:14] 2026-01-15 21:09:57,972 | INFO     | chi2: 3.0449328264969155
[2026-01-15 16:11:14] 2026-01-15 21:09:57,973 | INFO     | current chi2=3.0449328264969155 (change=38.61485175927666 %)
[2026-01-15 16:11:14] 2026-01-15 21:09:57,975 | INFO     | sum of square deviations: 70040669974.18094
[2026-01-15 16:11:14] 2026-01-15 21:09:58,157 | INFO     | monitor loop #1327: job 0:6969724924 is in state 'finished'
[2026-01-15 16:11:14] 2026-01-15 21:09:58,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 16:11:14] 2026-01-15 21:09:58,262 | INFO     | sum of deviations: -112389608745.02135
[2026-01-15 16:11:14] 2026-01-15 21:09:58,262 | INFO     | mean x: 1768492755.1559935
[2026-01-15 16:11:14] 2026-01-15 21:09:58,263 | INFO     | mean y: 2573822.6633825945
[2026-01-15 16:11:14] 2026-01-15 21:09:58,263 | INFO     | intersect: 2840356626.4780207
[2026-01-15 16:11:14] 2026-01-15 21:09:58,320 | INFO     | chi2: 2.9987194811584383
[2026-01-15 16:11:14] 2026-01-15 21:09:58,320 | INFO     | current chi2=2.9987194811584383 (change=1.5177131310198386 %)
[2026-01-15 16:11:14] 2026-01-15 21:09:58,320 | INFO     | left removable region: 20
[2026-01-15 16:11:14] 2026-01-15 21:09:58,354 | INFO     | sum of square deviations: 63042177280.9982
[2026-01-15 16:11:14] 2026-01-15 21:09:58,648 | INFO     | sum of deviations: 48237925569.700676
[2026-01-15 16:11:14] 2026-01-15 21:09:58,734 | INFO     | mean x: 1768492724.6649659
[2026-01-15 16:11:14] 2026-01-15 21:09:58,734 | INFO     | mean y: 2587319.034013605
[2026-01-15 16:11:14] 2026-01-15 21:09:58,735 | INFO     | intersect: -1350608653.9207299
[2026-01-15 16:11:14] 2026-01-15 21:09:58,737 | INFO     | chi2: 0.15941436212441268
[2026-01-15 16:11:14] 2026-01-15 21:09:58,801 | INFO     | current memory leak: 0.77 B/s (using 588 data points, chi2=0.16)
[2026-01-15 16:11:14] 2026-01-15 21:09:58,803 | INFO     | could have reported an average CPU frequency of 999 MHz (24 samples)
[2026-01-15 16:11:14] 2026-01-15 21:09:58,803 | INFO     | ..............................
[2026-01-15 16:11:14] 2026-01-15 21:09:58,803 | INFO     | . Timing measurements:
[2026-01-15 16:11:14] 2026-01-15 21:09:58,804 | INFO     | . get job = 0 s
[2026-01-15 16:11:14] 2026-01-15 21:09:58,804 | INFO     | . initial setup = 3 s
[2026-01-15 16:11:14] 2026-01-15 21:09:58,840 | INFO     | . payload setup = 17 s
[2026-01-15 16:11:14] 2026-01-15 21:09:58,841 | INFO     | . stage-in = 0 s
[2026-01-15 16:11:14] 2026-01-15 21:09:58,841 | INFO     | . payload execution = 37726 s
[2026-01-15 16:11:14] 2026-01-15 21:09:58,841 | INFO     | . stage-out = 17 s
[2026-01-15 16:11:14] 2026-01-15 21:09:58,842 | INFO     | . log creation = 2 s
[2026-01-15 16:11:14] 2026-01-15 21:09:58,842 | INFO     | ..............................
[2026-01-15 16:11:14] 2026-01-15 21:10:04,339 | INFO     | 
[2026-01-15 16:11:14] 2026-01-15 21:10:04,339 | INFO     | job summary report
[2026-01-15 16:11:14] 2026-01-15 21:10:04,340 | INFO     | --------------------------------------------------
[2026-01-15 16:11:14] 2026-01-15 21:10:04,340 | INFO     | PanDA job id: 6969724924
[2026-01-15 16:11:14] 2026-01-15 21:10:04,340 | INFO     | task id: 48215263
[2026-01-15 16:11:14] 2026-01-15 21:10:04,340 | INFO     | errors: (none)
[2026-01-15 16:11:14] 2026-01-15 21:10:04,340 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 16:11:14] 2026-01-15 21:10:04,340 | INFO     | pilot state: finished 
[2026-01-15 16:11:14] 2026-01-15 21:10:04,341 | INFO     | transexitcode: 0
[2026-01-15 16:11:14] 2026-01-15 21:10:04,341 | INFO     | exeerrorcode: 0
[2026-01-15 16:11:14] 2026-01-15 21:10:04,341 | INFO     | exeerrordiag: 
[2026-01-15 16:11:14] 2026-01-15 21:10:04,341 | INFO     | exitcode: 0
[2026-01-15 16:11:14] 2026-01-15 21:10:04,341 | INFO     | exitmsg: OK
[2026-01-15 16:11:14] 2026-01-15 21:10:04,341 | INFO     | cpuconsumptiontime: 71607 s
[2026-01-15 16:11:14] 2026-01-15 21:10:04,342 | INFO     | nevents: 400
[2026-01-15 16:11:14] 2026-01-15 21:10:04,342 | INFO     | neventsw: 0
[2026-01-15 16:11:14] 2026-01-15 21:10:04,342 | INFO     | pid: 2086138
[2026-01-15 16:11:14] 2026-01-15 21:10:04,366 | INFO     | pgrp: 2086138
[2026-01-15 16:11:14] 2026-01-15 21:10:04,366 | INFO     | corecount: 8
[2026-01-15 16:11:14] 2026-01-15 21:10:04,366 | INFO     | event service: False
[2026-01-15 16:11:14] 2026-01-15 21:10:04,366 | INFO     | sizes: {0: 2283722, 1: 2283778, 2: 2284005, 3: 2284005, 14: 2284323, 24: 2284323, 37747: 2324081, 37750: 2324080, 37768: 2333134, 37771: 2333190, 37835: 2333384}
[2026-01-15 16:11:14] 2026-01-15 21:10:04,367 | INFO     | --------------------------------------------------
[2026-01-15 16:11:14] 2026-01-15 21:10:04,367 | INFO     | 
[2026-01-15 16:11:14] 2026-01-15 21:10:04,367 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-15 16:11:14] 2026-01-15 21:10:04,765 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,766 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,768 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,768 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,769 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,777 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 16:11:14] 2026-01-15 21:10:04,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,777 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 16:11:14] 2026-01-15 21:10:04,778 | INFO     | job 6969724924 has completed (purged errors)
[2026-01-15 16:11:14] 2026-01-15 21:10:04,778 | INFO     | overall cleanup function is called
[2026-01-15 16:11:14] 2026-01-15 21:10:05,035 | INFO     | PID=2047847 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 16:11:14] 2026-01-15 21:10:05,035 | INFO     | .. there are 36 such processes running
[2026-01-15 16:11:14] 2026-01-15 21:10:05,809 | INFO     | --- collectZombieJob: --- 10, [2086138]
[2026-01-15 16:11:14] 2026-01-15 21:10:05,810 | INFO     | zombie collector waiting for pid 2086138
[2026-01-15 16:11:14] 2026-01-15 21:10:05,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 16:11:14] 2026-01-15 21:10:05,810 | INFO     | collected zombie processes
[2026-01-15 16:11:14] 2026-01-15 21:10:05,811 | INFO     | will attempt to kill all subprocesses of pid=2086138
[2026-01-15 16:11:14] 2026-01-15 21:10:15,814 | INFO     | process IDs to be killed: [2086138] (in reverse order)
[2026-01-15 16:11:14] 2026-01-15 21:10:16,789 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 16:11:14] 2026-01-15 21:10:16,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 16:11:14] 2026-01-15 21:10:16,974 | INFO     | did not find any defunct processes belonging to 2086138
[2026-01-15 16:11:14] 2026-01-15 21:10:17,276 | INFO     | did not find any defunct processes belonging to 2086138
[2026-01-15 16:11:14] 2026-01-15 21:10:17,277 | INFO     | ready for new job
[2026-01-15 16:11:14] 2026-01-15 21:10:17,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 16:11:14] 2026-01-15 21:10:17,358 | INFO     | ***************************************
[2026-01-15 16:11:14] 2026-01-15 21:10:17,359 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 16:11:14] 2026-01-15 21:10:17,364 | INFO     | ***************************************
[2026-01-15 16:11:14] 2026-01-15 21:10:17,365 | INFO     | 
[2026-01-15 16:11:14] 2026-01-15 21:10:17,411 | INFO     | architecture information:
[2026-01-15 16:11:14] 2026-01-15 21:10:17,431 | INFO     | executing command: cat /etc/os-release
[2026-01-15 16:11:14] 2026-01-15 21:10:17,648 | INFO     | cat /etc/os-release:
[2026-01-15 16:11:14] NAME="CentOS Linux"
[2026-01-15 16:11:14] VERSION="7 (Core)"
[2026-01-15 16:11:14] ID="centos"
[2026-01-15 16:11:14] ID_LIKE="rhel fedora"
[2026-01-15 16:11:14] VERSION_ID="7"
[2026-01-15 16:11:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 16:11:14] ANSI_COLOR="0;31"
[2026-01-15 16:11:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 16:11:14] HOME_URL="https://www.centos.org/"
[2026-01-15 16:11:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 16:11:14] 
[2026-01-15 16:11:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 16:11:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 16:11:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 16:11:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 16:11:14] 
[2026-01-15 16:11:14] 2026-01-15 21:10:17,649 | INFO     | ***************************************
[2026-01-15 16:11:14] 2026-01-15 21:10:18,155 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-15 16:11:14] 2026-01-15 21:10:18,376 | INFO     | sufficient remaining disk space (84895858688 B)
[2026-01-15 16:11:14] 2026-01-15 21:10:18,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 16:11:14] 2026-01-15 21:10:18,378 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 16:11:14] 2026-01-15 21:10:18,378 | INFO     | update_server=False
[2026-01-15 16:11:14] 2026-01-15 21:10:18,378 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 16:11:14] 2026-01-15 21:10:18,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 16:11:14] 2026-01-15 21:10:18,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 16:11:14] 2026-01-15 21:10:18,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 16:11:14] 2026-01-15 21:10:18,396 | INFO     | aborting loop
[2026-01-15 16:11:14] 2026-01-15 21:10:18,483 | INFO     | all payload control threads have been joined
[2026-01-15 16:11:14] 2026-01-15 21:10:19,153 | INFO     | all data control threads have been joined
[2026-01-15 16:11:14] 2026-01-15 21:10:19,389 | INFO     | [job] validate thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:19,398 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:19,406 | INFO     | [job] retrieve thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:19,418 | INFO     | [job] queue monitor thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:19,431 | INFO     | [job] job monitor thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:19,493 | INFO     | [payload] control thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:19,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 16:11:14] 2026-01-15 21:10:20,133 | INFO     | [data] copytool_in thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:20,141 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:20,145 | INFO     | all job control threads have been joined
[2026-01-15 16:11:14] 2026-01-15 21:10:20,165 | INFO     | [data] control thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:20,304 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:20,399 | INFO     | [data] copytool_out thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:20,673 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:20,985 | INFO     | [payload] validate_post thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:20,989 | INFO     | [payload] failed_post thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:21,173 | INFO     | [job] control thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:23,675 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 16:11:14] 2026-01-15 21:10:56,200 | INFO     | PID=2047847 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 16:11:14] 2026-01-15 21:10:56,201 | INFO     | .. there are 36 such processes running
[2026-01-15 16:11:14] 2026-01-15 21:10:56,202 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 16:11:14] 2026-01-15 21:10:56,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 16:11:14] 2026-01-15 21:10:56,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 16:11:14] 2026-01-15 21:11:04,577 | INFO     | [monitor] cgroup control has ended
[2026-01-15 16:11:14] 2026-01-15 21:11:05,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687505254208)>', '<ExcThread(monitor, started 139687117166336)>']
[2026-01-15 16:11:14] 2026-01-15 21:11:06,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 16:11:14] 2026-01-15 21:11:06,301 | INFO     | [monitor] control thread has ended
[2026-01-15 16:11:14] 2026-01-15 21:11:10,612 | INFO     | all workflow threads have been joined
[2026-01-15 16:11:14] 2026-01-15 21:11:10,613 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 16:11:14] 2026-01-15 21:11:10,614 | INFO     | traces error code: 0
[2026-01-15 16:11:14] 2026-01-15 21:11:10,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 16:11:14] 2026-01-15 21:11:12,648 [wrapper] ==== pilot stdout END ====
[2026-01-15 16:11:14] 2026-01-15 21:11:12,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 16:11:14] 2026-01-15 21:11:12,722 [wrapper] pilotpid: 2047847
[2026-01-15 16:11:14] 2026-01-15 21:11:12,818 [wrapper] Pilot exit status: 0
[2026-01-15 16:11:14] 2026-01-15 21:11:13,049 [wrapper] pandaids: 6969724924 6969724924
[2026-01-15 16:11:14] 2026-01-15 21:11:13,677 [wrapper] cleanup supervisor_pilot  101402 2047848
[2026-01-15 16:11:14] 2026-01-15 21:11:13,718 [wrapper] Test setup, not cleaning
[2026-01-15 16:11:14] 2026-01-15 21:11:13,753 [wrapper] apfmon messages muted
[2026-01-15 16:11:14] 2026-01-15 21:11:13,765 [wrapper] ==== wrapper stdout END ====
[2026-01-15 16:11:14] 2026-01-15 21:11:13,771 [wrapper] ==== wrapper stderr END ====
[2026-01-15 16:11:14]  *** Error codes and diagnostics ***
[2026-01-15 16:11:14]     "exeErrorCode": 0,
[2026-01-15 16:11:14]     "exeErrorDiag": "",
[2026-01-15 16:11:14]     "pilotErrorCode": 0,
[2026-01-15 16:11:14]     "pilotErrorDiag": "",
[2026-01-15 16:11:14]  *** Listing of results directory ***
[2026-01-15 16:11:14] total 1310396
[2026-01-15 16:11:14] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 16:43 pilot3.tar.gz
[2026-01-15 16:11:14] -rwx------. 1 boincer umatlas     36322 Jan 14 16:47 runpilot2-wrapper.sh
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 16:50 queuedata.json
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas       100 Jan 15 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 16:11:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 00:05 run_atlas
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas       105 Jan 15 00:05 job.xml
[2026-01-15 16:11:14] -rw-r--r--. 3 boincer umatlas 590655778 Jan 15 00:05 EVNT.32794306._001481.pool.root.1
[2026-01-15 16:11:14] -rw-r--r--. 3 boincer umatlas 590655778 Jan 15 00:05 ATLAS.root_0
[2026-01-15 16:11:14] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 00:05 input.tar.gz
[2026-01-15 16:11:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 00:05 start_atlas.sh
[2026-01-15 16:11:14] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 00:05 shared
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas         0 Jan 15 00:05 boinc_lockfile
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas      2507 Jan 15 05:38 pandaJob.out
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas        57 Jan 15 05:38 setup.sh.local
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas   1007559 Jan 15 05:38 agis_schedconf.cvmfs.json
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas      6859 Jan 15 16:03 init_data.xml
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas 148596450 Jan 15 16:04 HITS.48215263._037068.pool.root.1
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas       533 Jan 15 16:04 boinc_task_state.xml
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas      1055 Jan 15 16:08 memory_monitor_summary.json
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas   1516246 Jan 15 16:08 agis_ddmendpoints.agis.ALL.json
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas    643727 Jan 15 16:08 log.48215263._037068.job.log.tgz.1
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas      7854 Jan 15 16:09 heartbeat.json
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas        97 Jan 15 16:10 pilot_heartbeat.json
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas        29 Jan 15 16:10 wrapper_checkpoint.txt
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 16:10 boinc_mmap_file
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas      4824 Jan 15 16:11 pilotlog.txt
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas   3354469 Jan 15 16:11 log.48215263._037068.job.log.1
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas       357 Jan 15 16:11 output.list
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas       620 Jan 15 16:11 runtime_log
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas   4014080 Jan 15 16:11 result.tar.gz
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas      9438 Jan 15 16:11 runtime_log.err
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas       789 Jan 15 16:11 GJaMDmXtN08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm32sKDm0JlQGm.diag
[2026-01-15 16:11:14] -rw-r--r--. 1 boincer umatlas     23497 Jan 15 16:11 stderr.txt
[2026-01-15 16:11:14] HITS file was successfully produced:
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas 148596450 Jan 15 16:04 shared/HITS.pool.root.1
[2026-01-15 16:11:14]  *** Contents of shared directory: ***
[2026-01-15 16:11:14] total 726456
[2026-01-15 16:11:14] -rw-r--r--. 3 boincer umatlas 590655778 Jan 15 00:05 ATLAS.root_0
[2026-01-15 16:11:14] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 00:05 input.tar.gz
[2026-01-15 16:11:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 00:05 start_atlas.sh
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas 148596450 Jan 15 16:04 HITS.pool.root.1
[2026-01-15 16:11:14] -rw-------. 1 boincer umatlas   4014080 Jan 15 16:11 result.tar.gz
16:11:16 (2025358): run_atlas exited; CPU time 75102.041170
16:11:16 (2025358): called boinc_finish(0)

</stderr_txt>
]]>

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