Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:21 (2322881): wrapper (7.7.26015): starting
00:05:21 (2322881): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 00:05:21] Arguments: --nthreads 9
[2026-01-15 00:05:21] Threads: 9
[2026-01-15 00:05:21] Checking for CVMFS
[2026-01-15 00:05:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 00:05:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 00:05:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 00:05:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 00:05:26] 2.13.3.0 13071 38274 316844 155156 3 266 32127286 32935936 30028 16776704 0 40235616 99.732 38540987 14569 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 00:05:26] CVMFS is ok
[2026-01-15 00:05:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 00:05:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 00:05:26] Further information can be found at the LHC@home message board.
[2026-01-15 00:05:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 00:05:26] Checking for apptainer binary...
[2026-01-15 00:05:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 00:05:26] Running /usr/bin/apptainer --version
[2026-01-15 00:05:26] apptainer version 1.4.5-2.el9
[2026-01-15 00:05:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 00:05:28] c6-12-25-1.aglt2.org
[2026-01-15 00:05:28] apptainer works
[2026-01-15 00:05:28] Set ATHENA_PROC_NUMBER=9
[2026-01-15 00:05:28] Set ATHENA_CORE_NUMBER=9
[2026-01-15 00:05:28] Starting ATLAS job with PandaID=6969709238
[2026-01-15 00:05:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 21:08:56]  *** The last 200 lines of the pilot log: ***
[2026-01-15 21:08:56] 2026-01-16 01:06:02,483 | INFO     | monitor loop #1921: job 0:6969709238 is in state 'finished'
[2026-01-15 21:08:56] 2026-01-16 01:06:02,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:08:56] 2026-01-16 01:06:04,258 | INFO     | time since job start (71911s) is within the limit (349056.0s)
[2026-01-15 21:08:56] 2026-01-16 01:06:04,583 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 21:08:56] 2026-01-16 01:06:04,735 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 999.9994791666668
[2026-01-15 21:08:56] 2026-01-16 01:06:04,949 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6969709238/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 21:08:56] 2026-01-16 01:06:04,964 | INFO     | extracted standard info from prmon json
[2026-01-15 21:08:56] 2026-01-16 01:06:04,965 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 21:08:56] 2026-01-16 01:06:04,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 21:08:56] 2026-01-16 01:06:04,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 21:08:56] 2026-01-16 01:06:04,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 21:08:56] 2026-01-16 01:06:05,018 | INFO     | monitor loop #1922: job 0:6969709238 is in state 'finished'
[2026-01-15 21:08:56] 2026-01-16 01:06:05,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:08:56] 2026-01-16 01:06:05,212 | INFO     | fitting pss+swap vs Time
[2026-01-15 21:08:56] 2026-01-16 01:06:05,233 | INFO     | sum of square deviations: 501749829059.28516
[2026-01-15 21:08:56] 2026-01-16 01:06:05,585 | INFO     | sum of deviations: 1418635974311.9465
[2026-01-15 21:08:56] 2026-01-16 01:06:05,586 | INFO     | mean x: 1768489690.6550255
[2026-01-15 21:08:56] 2026-01-16 01:06:05,586 | INFO     | mean y: 2529305.2887563882
[2026-01-15 21:08:56] 2026-01-16 01:06:05,632 | INFO     | intersect: -4997657939.551517
[2026-01-15 21:08:56] 2026-01-16 01:06:05,641 | INFO     | chi2: 15.491574919882401
[2026-01-15 21:08:56] 2026-01-16 01:06:05,659 | INFO     | sum of square deviations: 495367303771.80524
[2026-01-15 21:08:56] 2026-01-16 01:06:05,914 | INFO     | sum of deviations: 1796756969252.078
[2026-01-15 21:08:56] 2026-01-16 01:06:05,925 | INFO     | mean x: 1768489538.1659539
[2026-01-15 21:08:56] 2026-01-16 01:06:05,926 | INFO     | mean y: 2538339.293413174
[2026-01-15 21:08:56] 2026-01-16 01:06:05,926 | INFO     | intersect: -6411986556.788197
[2026-01-15 21:08:56] 2026-01-16 01:06:05,940 | INFO     | chi2: 11.924397221801138
[2026-01-15 21:08:56] 2026-01-16 01:06:05,940 | INFO     | current chi2=11.924397221801138 (change=23.02656583678286 %)
[2026-01-15 21:08:56] 2026-01-16 01:06:05,940 | INFO     | right removable region: 1168
[2026-01-15 21:08:56] 2026-01-16 01:06:05,954 | INFO     | sum of square deviations: 495365330047.13824
[2026-01-15 21:08:56] 2026-01-16 01:06:06,219 | INFO     | sum of deviations: 1017296039194.1646
[2026-01-15 21:08:56] 2026-01-16 01:06:06,219 | INFO     | mean x: 1768489843.1676648
[2026-01-15 21:08:56] 2026-01-16 01:06:06,220 | INFO     | mean y: 2538890.7185628745
[2026-01-15 21:08:56] 2026-01-16 01:06:06,220 | INFO     | intersect: -3629281108.953955
[2026-01-15 21:08:56] 2026-01-16 01:06:06,234 | INFO     | chi2: 11.466247776096393
[2026-01-15 21:08:56] 2026-01-16 01:06:06,235 | INFO     | current chi2=11.466247776096393 (change=25.983976223229373 %)
[2026-01-15 21:08:56] 2026-01-16 01:06:06,249 | INFO     | sum of square deviations: 489035418578.18805
[2026-01-15 21:08:56] 2026-01-16 01:06:06,304 | INFO     | time since job start (71913s) is within the limit (349056.0s)
[2026-01-15 21:08:56] 2026-01-16 01:06:06,552 | INFO     | sum of deviations: 713382782614.9276
[2026-01-15 21:08:56] 2026-01-16 01:06:06,572 | INFO     | mean x: 1768489995.677835
[2026-01-15 21:08:56] 2026-01-16 01:06:06,572 | INFO     | mean y: 2546211.543814433
[2026-01-15 21:08:56] 2026-01-16 01:06:06,573 | INFO     | intersect: -2577247124.9210496
[2026-01-15 21:08:56] 2026-01-16 01:06:06,577 | INFO     | chi2: 9.226447601137576
[2026-01-15 21:08:56] 2026-01-16 01:06:06,577 | INFO     | current chi2=9.226447601137576 (change=19.533854654947486 %)
[2026-01-15 21:08:56] 2026-01-16 01:06:06,578 | INFO     | left removable region: 20
[2026-01-15 21:08:56] 2026-01-16 01:06:06,603 | INFO     | sum of square deviations: 469144533163.13806
[2026-01-15 21:08:56] 2026-01-16 01:06:07,020 | INFO     | sum of deviations: 806505747439.2783
[2026-01-15 21:08:56] 2026-01-16 01:06:07,021 | INFO     | mean x: 1768490117.7125435
[2026-01-15 21:08:56] 2026-01-16 01:06:07,021 | INFO     | mean y: 2566125.7099303138
[2026-01-15 21:08:56] 2026-01-16 01:06:07,022 | INFO     | intersect: -3037642900.2977505
[2026-01-15 21:08:56] 2026-01-16 01:06:07,046 | INFO     | chi2: 3.2920280643937323
[2026-01-15 21:08:56] 2026-01-16 01:06:07,067 | INFO     | current memory leak: 1.72 B/s (using 1148 data points, chi2=3.29)
[2026-01-15 21:08:56] 2026-01-16 01:06:07,070 | INFO     | could have reported an average CPU frequency of 999 MHz (42 samples)
[2026-01-15 21:08:56] 2026-01-16 01:06:07,070 | INFO     | ..............................
[2026-01-15 21:08:56] 2026-01-16 01:06:07,092 | INFO     | . Timing measurements:
[2026-01-15 21:08:56] 2026-01-16 01:06:07,092 | INFO     | . get job = 1 s
[2026-01-15 21:08:56] 2026-01-16 01:06:07,092 | INFO     | . initial setup = 11 s
[2026-01-15 21:08:56] 2026-01-16 01:06:07,093 | INFO     | . payload setup = 77 s
[2026-01-15 21:08:56] 2026-01-16 01:06:07,093 | INFO     | . stage-in = 2 s
[2026-01-15 21:08:56] 2026-01-16 01:06:07,093 | INFO     | . payload execution = 71609 s
[2026-01-15 21:08:56] 2026-01-16 01:06:07,093 | INFO     | . stage-out = 23 s
[2026-01-15 21:08:56] 2026-01-16 01:06:07,094 | INFO     | . log creation = 4 s
[2026-01-15 21:08:56] 2026-01-16 01:06:07,094 | INFO     | ..............................
[2026-01-15 21:08:56] 2026-01-16 01:06:08,351 | INFO     | time since job start (71915s) is within the limit (349056.0s)
[2026-01-15 21:08:56] 2026-01-16 01:06:08,351 | INFO     | 71927s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-15 21:08:56] 2026-01-16 01:06:08,790 | INFO     | 
[2026-01-15 21:08:56] 2026-01-16 01:06:08,790 | INFO     | job summary report
[2026-01-15 21:08:56] 2026-01-16 01:06:08,790 | INFO     | --------------------------------------------------
[2026-01-15 21:08:56] 2026-01-16 01:06:08,791 | INFO     | PanDA job id: 6969709238
[2026-01-15 21:08:56] 2026-01-16 01:06:08,791 | INFO     | task id: 48215263
[2026-01-15 21:08:56] 2026-01-16 01:06:08,791 | INFO     | errors: (none)
[2026-01-15 21:08:56] 2026-01-16 01:06:08,791 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 21:08:56] 2026-01-16 01:06:08,791 | INFO     | pilot state: finished 
[2026-01-15 21:08:56] 2026-01-16 01:06:08,792 | INFO     | transexitcode: 0
[2026-01-15 21:08:56] 2026-01-16 01:06:08,792 | INFO     | exeerrorcode: 0
[2026-01-15 21:08:56] 2026-01-16 01:06:08,792 | INFO     | exeerrordiag: 
[2026-01-15 21:08:56] 2026-01-16 01:06:08,792 | INFO     | exitcode: 0
[2026-01-15 21:08:56] 2026-01-16 01:06:08,792 | INFO     | exitmsg: OK
[2026-01-15 21:08:56] 2026-01-16 01:06:08,792 | INFO     | cpuconsumptiontime: 72546 s
[2026-01-15 21:08:56] 2026-01-16 01:06:08,793 | INFO     | nevents: 400
[2026-01-15 21:08:56] 2026-01-16 01:06:08,793 | INFO     | neventsw: 0
[2026-01-15 21:08:56] 2026-01-16 01:06:08,793 | INFO     | pid: 2397338
[2026-01-15 21:08:56] 2026-01-16 01:06:08,793 | INFO     | pgrp: 2397338
[2026-01-15 21:08:56] 2026-01-16 01:06:08,793 | INFO     | corecount: 9
[2026-01-15 21:08:56] 2026-01-16 01:06:08,794 | INFO     | event service: False
[2026-01-15 21:08:56] 2026-01-16 01:06:08,905 | INFO     | sizes: {0: 2283124, 2: 2283725, 3: 2283809, 6: 2283865, 7: 2283865, 9: 2284036, 10: 2284192, 21: 2284220, 33: 2284248, 45: 2284304, 59: 2284304, 60: 2284874, 71: 2
[2026-01-15 21:08:56] 2026-01-16 01:06:08,905 | INFO     | --------------------------------------------------
[2026-01-15 21:08:56] 2026-01-16 01:06:08,906 | INFO     | 
[2026-01-15 21:08:56] 2026-01-16 01:06:08,906 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-15 21:08:56] 2026-01-16 01:06:09,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,439 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,439 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,439 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,540 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 21:08:56] 2026-01-16 01:06:09,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,541 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 21:08:56] 2026-01-16 01:06:09,541 | INFO     | job 6969709238 has completed (purged errors)
[2026-01-15 21:08:56] 2026-01-16 01:06:09,542 | INFO     | overall cleanup function is called
[2026-01-15 21:08:56] 2026-01-16 01:06:10,750 | INFO     | --- collectZombieJob: --- 10, [2397338]
[2026-01-15 21:08:56] 2026-01-16 01:06:10,750 | INFO     | zombie collector waiting for pid 2397338
[2026-01-15 21:08:56] 2026-01-16 01:06:10,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 21:08:56] 2026-01-16 01:06:10,751 | INFO     | collected zombie processes
[2026-01-15 21:08:56] 2026-01-16 01:06:10,751 | INFO     | will attempt to kill all subprocesses of pid=2397338
[2026-01-15 21:08:56] 2026-01-16 01:06:24,644 | INFO     | process IDs to be killed: [2397338] (in reverse order)
[2026-01-15 21:08:56] 2026-01-16 01:06:25,565 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 21:08:56] 2026-01-16 01:06:25,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 21:08:56] 2026-01-16 01:06:25,988 | INFO     | did not find any defunct processes belonging to 2397338
[2026-01-15 21:08:56] 2026-01-16 01:06:26,317 | INFO     | did not find any defunct processes belonging to 2397338
[2026-01-15 21:08:56] 2026-01-16 01:06:26,317 | INFO     | ready for new job
[2026-01-15 21:08:56] 2026-01-16 01:06:26,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 21:08:56] 2026-01-16 01:06:26,372 | INFO     | ***************************************
[2026-01-15 21:08:56] 2026-01-16 01:06:26,381 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 21:08:56] 2026-01-16 01:06:26,381 | INFO     | ***************************************
[2026-01-15 21:08:56] 2026-01-16 01:06:26,381 | INFO     | 
[2026-01-15 21:08:56] 2026-01-16 01:06:26,491 | INFO     | architecture information:
[2026-01-15 21:08:56] 2026-01-16 01:06:26,492 | INFO     | executing command: cat /etc/os-release
[2026-01-15 21:08:56] 2026-01-16 01:06:26,698 | INFO     | cat /etc/os-release:
[2026-01-15 21:08:56] NAME="CentOS Linux"
[2026-01-15 21:08:56] VERSION="7 (Core)"
[2026-01-15 21:08:56] ID="centos"
[2026-01-15 21:08:56] ID_LIKE="rhel fedora"
[2026-01-15 21:08:56] VERSION_ID="7"
[2026-01-15 21:08:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 21:08:56] ANSI_COLOR="0;31"
[2026-01-15 21:08:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 21:08:56] HOME_URL="https://www.centos.org/"
[2026-01-15 21:08:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 21:08:56] 
[2026-01-15 21:08:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 21:08:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 21:08:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 21:08:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 21:08:56] 
[2026-01-15 21:08:56] 2026-01-16 01:06:26,699 | INFO     | ***************************************
[2026-01-15 21:08:56] 2026-01-16 01:06:27,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-15 21:08:56] 2026-01-16 01:06:27,345 | INFO     | sufficient remaining disk space (63091769344 B)
[2026-01-15 21:08:56] 2026-01-16 01:06:27,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 21:08:56] 2026-01-16 01:06:27,346 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 21:08:56] 2026-01-16 01:06:27,346 | INFO     | update_server=False
[2026-01-15 21:08:56] 2026-01-16 01:06:27,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 21:08:56] 2026-01-16 01:06:27,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 21:08:56] 2026-01-16 01:06:27,369 | INFO     | aborting loop
[2026-01-15 21:08:56] 2026-01-16 01:06:27,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 21:08:56] 2026-01-16 01:06:27,572 | INFO     | all job control threads have been joined
[2026-01-15 21:08:56] 2026-01-16 01:06:27,765 | INFO     | all data control threads have been joined
[2026-01-15 21:08:56] 2026-01-16 01:06:28,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 21:08:56] 2026-01-16 01:06:28,353 | INFO     | [job] retrieve thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:28,376 | INFO     | [job] job monitor thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:28,578 | INFO     | [job] control thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:28,773 | INFO     | [data] control thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:28,777 | INFO     | [job] validate thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:28,809 | INFO     | all payload control threads have been joined
[2026-01-15 21:08:56] 2026-01-16 01:06:28,979 | INFO     | [payload] validate_post thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:29,279 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:29,282 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:29,286 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:29,291 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:29,307 | INFO     | [data] copytool_in thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:29,815 | INFO     | [payload] control thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:29,890 | INFO     | [payload] failed_post thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:30,055 | INFO     | [data] copytool_out thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:30,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 21:08:56] 2026-01-16 01:06:31,276 | INFO     | [job] queue monitor thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:06:31,384 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 21:08:56] 2026-01-16 01:07:10,719 | INFO     | PID=2343129 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 21:08:56] 2026-01-16 01:07:10,877 | INFO     | .. there are 41 such processes running
[2026-01-15 21:08:56] 2026-01-16 01:07:10,879 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 21:08:56] 2026-01-16 01:07:10,880 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 21:08:56] 2026-01-16 01:07:10,880 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 21:08:56] 2026-01-16 01:07:13,970 | INFO     | [monitor] cgroup control has ended
[2026-01-15 21:08:56] 2026-01-16 01:07:15,477 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141101594432)>', '<ExcThread(monitor, started 140140546615040)>']
[2026-01-15 21:08:56] 2026-01-16 01:07:15,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 21:08:56] 2026-01-16 01:07:15,950 | INFO     | [monitor] control thread has ended
[2026-01-15 21:08:56] 2026-01-16 01:07:20,504 | INFO     | all workflow threads have been joined
[2026-01-15 21:08:56] 2026-01-16 01:07:20,504 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 21:08:56] 2026-01-16 01:07:20,505 | INFO     | traces error code: 0
[2026-01-15 21:08:56] 2026-01-16 01:07:20,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 21:08:56] 2026-01-16 01:07:23,857 [wrapper] supervise_pilot (15 min periods counter: 81)
[2026-01-15 21:08:56] 2026-01-16 01:07:26,959 [wrapper] ==== pilot stdout END ====
[2026-01-15 21:08:56] 2026-01-16 01:07:26,985 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 21:08:56] 2026-01-16 01:07:27,011 [wrapper] pilotpid: 2343129
[2026-01-15 21:08:56] 2026-01-16 01:07:27,036 [wrapper] Pilot exit status: 0
[2026-01-15 21:08:56] 2026-01-16 01:07:27,188 [wrapper] pandaids: 6969709238
[2026-01-15 21:08:56] 2026-01-16 01:07:29,034 [wrapper] cleanup supervisor_pilot 2241434 2343130
[2026-01-15 21:08:56] 2026-01-16 01:07:29,058 [wrapper] Test setup, not cleaning
[2026-01-15 21:08:56] 2026-01-16 01:07:29,138 [wrapper] apfmon messages muted
[2026-01-15 21:08:56] 2026-01-16 01:07:29,178 [wrapper] ==== wrapper stdout END ====
[2026-01-15 21:08:56] 2026-01-16 01:07:29,202 [wrapper] ==== wrapper stderr END ====
[2026-01-15 21:08:56]  *** Error codes and diagnostics ***
[2026-01-15 21:08:56]     "exeErrorCode": 0,
[2026-01-15 21:08:56]     "exeErrorDiag": "",
[2026-01-15 21:08:56]     "pilotErrorCode": 0,
[2026-01-15 21:08:56]     "pilotErrorDiag": "",
[2026-01-15 21:08:56]  *** Listing of results directory ***
[2026-01-15 21:08:56] total 746728
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 16:43 pilot3.tar.gz
[2026-01-15 21:08:56] -rwx------. 1 boincer umatlas     36322 Jan 14 16:46 runpilot2-wrapper.sh
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 16:50 queuedata.json
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas       100 Jan 15 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 21:08:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 00:05 run_atlas
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas       105 Jan 15 00:05 job.xml
[2026-01-15 21:08:56] -rw-r--r--. 2 boincer umatlas 598850432 Jan 15 00:05 EVNT.32794306._001416.pool.root.1
[2026-01-15 21:08:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 00:05 start_atlas.sh
[2026-01-15 21:08:56] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 00:05 shared
[2026-01-15 21:08:56] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 00:05 input.tar.gz
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas         0 Jan 15 00:05 boinc_lockfile
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 00:05 pandaJob.out
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas        57 Jan 15 00:05 setup.sh.local
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas    999472 Jan 15 00:07 agis_schedconf.cvmfs.json
[2026-01-15 21:08:56] drwx------. 5 boincer umatlas      4096 Jan 15 00:07 pilot3
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas 149467225 Jan 15 19:55 HITS.48215263._035444.pool.root.1
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas       531 Jan 15 19:57 boinc_task_state.xml
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas      1045 Jan 15 20:04 memory_monitor_summary.json
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas   1516246 Jan 15 20:04 agis_ddmendpoints.agis.ALL.json
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas    936362 Jan 15 20:05 log.48215263._035444.job.log.tgz.1
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas      7833 Jan 15 20:06 heartbeat.json
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas        96 Jan 15 20:07 pilot_heartbeat.json
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas      4824 Jan 15 20:07 pilotlog.txt
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas   5264089 Jan 15 20:07 log.48215263._035444.job.log.1
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas       357 Jan 15 20:07 output.list
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas       620 Jan 15 20:07 runtime_log
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas   6215680 Jan 15 20:07 result.tar.gz
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas      9353 Jan 15 20:07 runtime_log.err
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas       661 Jan 15 20:07 EkPKDmjsN08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTxsKDm07wrBo.diag
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas      6856 Jan 15 21:02 init_data.xml
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas        27 Jan 15 21:08 wrapper_checkpoint.txt
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 21:08 boinc_mmap_file
[2026-01-15 21:08:56] -rw-r--r--. 1 boincer umatlas     21447 Jan 15 21:08 stderr.txt
[2026-01-15 21:08:56] HITS file was successfully produced:
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas 149467225 Jan 15 19:55 shared/HITS.pool.root.1
[2026-01-15 21:08:56]  *** Contents of shared directory: ***
[2026-01-15 21:08:56] total 737460
[2026-01-15 21:08:56] -rw-r--r--. 2 boincer umatlas 598850432 Jan 15 00:05 ATLAS.root_0
[2026-01-15 21:08:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 00:05 start_atlas.sh
[2026-01-15 21:08:56] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 00:05 input.tar.gz
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas 149467225 Jan 15 19:55 HITS.pool.root.1
[2026-01-15 21:08:56] -rw-------. 1 boincer umatlas   6215680 Jan 15 20:07 result.tar.gz
21:08:57 (2322881): run_atlas exited; CPU time 78211.999906
21:08:57 (2322881): called boinc_finish(0)

</stderr_txt>
]]>

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