Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:30 (142053): wrapper (7.7.26015): starting
00:01:30 (142053): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 00:01:30] Arguments: --nthreads 9
[2026-01-15 00:01:30] Threads: 9
[2026-01-15 00:01:30] Checking for CVMFS
[2026-01-15 00:01:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 00:01:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 00:01:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 00:01:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 00:01:32] 2.13.3.0 11883 101468 388212 155156 2 354 32825683 32935936 23767 16776704 0 383861031 99.511 500903447 33865 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 00:01:32] CVMFS is ok
[2026-01-15 00:01:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 00:01:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 00:01:32] Further information can be found at the LHC@home message board.
[2026-01-15 00:01:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 00:01:32] Checking for apptainer binary...
[2026-01-15 00:01:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 00:01:32] Running /usr/bin/apptainer --version
[2026-01-15 00:01:32] apptainer version 1.4.5-2.el9
[2026-01-15 00:01:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 00:01:33] c6-12-29-2.aglt2.org
[2026-01-15 00:01:33] apptainer works
[2026-01-15 00:01:34] Set ATHENA_PROC_NUMBER=9
[2026-01-15 00:01:34] Set ATHENA_CORE_NUMBER=9
[2026-01-15 00:01:34] Starting ATLAS job with PandaID=6970067342
[2026-01-15 00:01:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 02:27:18]  *** The last 200 lines of the pilot log: ***
[2026-01-15 02:27:18] 2026-01-15 07:26:43,793 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2606.424322916667
[2026-01-15 02:27:18] 2026-01-15 07:26:43,857 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6970067342/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 02:27:18] 2026-01-15 07:26:43,858 | INFO     | extracted standard info from prmon json
[2026-01-15 02:27:18] 2026-01-15 07:26:43,858 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 02:27:18] 2026-01-15 07:26:43,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 02:27:18] 2026-01-15 07:26:43,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 02:27:18] 2026-01-15 07:26:43,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 02:27:18] 2026-01-15 07:26:43,863 | INFO     | fitting pss+swap vs Time
[2026-01-15 02:27:18] 2026-01-15 07:26:43,864 | INFO     | sum of square deviations: 850741635.2857145
[2026-01-15 02:27:18] 2026-01-15 07:26:43,869 | INFO     | sum of deviations: 48308049325.64287
[2026-01-15 02:27:18] 2026-01-15 07:26:43,869 | INFO     | mean x: 1768457731.9285715
[2026-01-15 02:27:18] 2026-01-15 07:26:43,869 | INFO     | mean y: 2469454.464285714
[2026-01-15 02:27:18] 2026-01-15 07:26:43,870 | INFO     | intersect: -100416670506.43434
[2026-01-15 02:27:18] 2026-01-15 07:26:43,870 | INFO     | chi2: 4.4013288666922685
[2026-01-15 02:27:18] 2026-01-15 07:26:43,870 | INFO     | sum of square deviations: 762814099.333336
[2026-01-15 02:27:18] 2026-01-15 07:26:43,871 | INFO     | sum of deviations: 55937131416.33335
[2026-01-15 02:27:18] 2026-01-15 07:26:43,872 | INFO     | mean x: 1768457579.4444444
[2026-01-15 02:27:18] 2026-01-15 07:26:43,872 | INFO     | mean y: 2482195.311111111
[2026-01-15 02:27:18] 2026-01-15 07:26:43,872 | INFO     | intersect: -129678450697.83844
[2026-01-15 02:27:18] 2026-01-15 07:26:43,872 | INFO     | chi2: 3.615974984440734
[2026-01-15 02:27:18] 2026-01-15 07:26:43,872 | INFO     | current chi2=3.615974984440734 (change=17.843562842913663 %)
[2026-01-15 02:27:18] 2026-01-15 07:26:43,872 | INFO     | right removable region: 134
[2026-01-15 02:27:18] 2026-01-15 07:26:43,904 | INFO     | sum of square deviations: 762777499.333336
[2026-01-15 02:27:18] 2026-01-15 07:26:43,905 | INFO     | sum of deviations: 8028910768.777782
[2026-01-15 02:27:18] 2026-01-15 07:26:43,905 | INFO     | mean x: 1768457884.4444444
[2026-01-15 02:27:18] 2026-01-15 07:26:43,905 | INFO     | mean y: 2539029.3703703703
[2026-01-15 02:27:18] 2026-01-15 07:26:43,905 | INFO     | intersect: -18612051155.782776
[2026-01-15 02:27:18] 2026-01-15 07:26:43,905 | INFO     | chi2: 1.198656587859177
[2026-01-15 02:27:18] 2026-01-15 07:26:43,905 | INFO     | current chi2=1.198656587859177 (change=72.76602989314898 %)
[2026-01-15 02:27:18] 2026-01-15 07:26:43,906 | INFO     | sum of square deviations: 681100663.7230749
[2026-01-15 02:27:18] 2026-01-15 07:26:43,906 | INFO     | sum of deviations: -5128456637.200001
[2026-01-15 02:27:18] 2026-01-15 07:26:43,906 | INFO     | mean x: 1768458036.9538462
[2026-01-15 02:27:18] 2026-01-15 07:26:43,906 | INFO     | mean y: 2563504.8
[2026-01-15 02:27:18] 2026-01-15 07:26:43,907 | INFO     | intersect: 13318451801.91248
[2026-01-15 02:27:18] 2026-01-15 07:26:43,907 | INFO     | chi2: 0.8834034686136418
[2026-01-15 02:27:18] 2026-01-15 07:26:43,907 | INFO     | current chi2=0.8834034686136418 (change=26.300536987710814 %)
[2026-01-15 02:27:18] 2026-01-15 07:26:43,907 | INFO     | sum of square deviations: 605470575.087999
[2026-01-15 02:27:18] 2026-01-15 07:26:43,912 | INFO     | sum of deviations: -8438141722.576
[2026-01-15 02:27:18] 2026-01-15 07:26:43,912 | INFO     | mean x: 1768458189.464
[2026-01-15 02:27:18] 2026-01-15 07:26:43,912 | INFO     | mean y: 2570042.872
[2026-01-15 02:27:18] 2026-01-15 07:26:43,912 | INFO     | intersect: 24648690675.536205
[2026-01-15 02:27:18] 2026-01-15 07:26:43,913 | INFO     | chi2: 0.8365674015387216
[2026-01-15 02:27:18] 2026-01-15 07:26:43,913 | INFO     | current chi2=0.8365674015387216 (change=5.301775319993012 %)
[2026-01-15 02:27:18] 2026-01-15 07:26:43,913 | INFO     | left removable region: 30
[2026-01-15 02:27:18] 2026-01-15 07:26:43,913 | INFO     | sum of square deviations: 348684831.8461526
[2026-01-15 02:27:18] 2026-01-15 07:26:43,914 | INFO     | sum of deviations: -147667091.0
[2026-01-15 02:27:18] 2026-01-15 07:26:43,914 | INFO     | mean x: 1768458463.9615386
[2026-01-15 02:27:18] 2026-01-15 07:26:43,914 | INFO     | mean y: 2589712.0
[2026-01-15 02:27:18] 2026-01-15 07:26:43,914 | INFO     | intersect: 751527127.9032843
[2026-01-15 02:27:18] 2026-01-15 07:26:43,914 | INFO     | chi2: 0.0011486924519001254
[2026-01-15 02:27:18] 2026-01-15 07:26:43,914 | INFO     | current memory leak: -0.42 B/s (using 104 data points, chi2=0.00)
[2026-01-15 02:27:18] 2026-01-15 07:26:43,915 | INFO     | could have reported an average CPU frequency of 2617 MHz (8 samples)
[2026-01-15 02:27:18] 2026-01-15 07:26:43,915 | INFO     | ..............................
[2026-01-15 02:27:18] 2026-01-15 07:26:43,915 | INFO     | . Timing measurements:
[2026-01-15 02:27:18] 2026-01-15 07:26:43,915 | INFO     | . get job = 0 s
[2026-01-15 02:27:18] 2026-01-15 07:26:43,915 | INFO     | . initial setup = 6 s
[2026-01-15 02:27:18] 2026-01-15 07:26:43,915 | INFO     | . payload setup = 37 s
[2026-01-15 02:27:18] 2026-01-15 07:26:43,915 | INFO     | . stage-in = 0 s
[2026-01-15 02:27:18] 2026-01-15 07:26:43,915 | INFO     | . payload execution = 8521 s
[2026-01-15 02:27:18] 2026-01-15 07:26:43,919 | INFO     | . stage-out = 1 s
[2026-01-15 02:27:18] 2026-01-15 07:26:43,919 | INFO     | . log creation = 0 s
[2026-01-15 02:27:18] 2026-01-15 07:26:43,919 | INFO     | ..............................
[2026-01-15 02:27:18] 2026-01-15 07:26:44,132 | INFO     | 
[2026-01-15 02:27:18] 2026-01-15 07:26:44,132 | INFO     | job summary report
[2026-01-15 02:27:18] 2026-01-15 07:26:44,132 | INFO     | --------------------------------------------------
[2026-01-15 02:27:18] 2026-01-15 07:26:44,132 | INFO     | PanDA job id: 6970067342
[2026-01-15 02:27:18] 2026-01-15 07:26:44,132 | INFO     | task id: 48215263
[2026-01-15 02:27:18] 2026-01-15 07:26:44,132 | INFO     | errors: (none)
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | pilot state: finished 
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | transexitcode: 0
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | exeerrorcode: 0
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | exeerrordiag: 
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | exitcode: 0
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | exitmsg: OK
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | cpuconsumptiontime: 29033 s
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | nevents: 400
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | neventsw: 0
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | pid: 189590
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | pgrp: 189590
[2026-01-15 02:27:18] 2026-01-15 07:26:44,133 | INFO     | corecount: 9
[2026-01-15 02:27:18] 2026-01-15 07:26:44,134 | INFO     | event service: False
[2026-01-15 02:27:18] 2026-01-15 07:26:44,134 | INFO     | sizes: {0: 2283781, 1: 2283980, 2: 2283980, 13: 2284008, 24: 2284064, 30: 2284354, 35: 2284510, 8561: 2312413, 8562: 2312412, 8564: 2321522, 8579: 2321660}
[2026-01-15 02:27:18] 2026-01-15 07:26:44,134 | INFO     | --------------------------------------------------
[2026-01-15 02:27:18] 2026-01-15 07:26:44,134 | INFO     | 
[2026-01-15 02:27:18] 2026-01-15 07:26:44,134 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-15 02:27:18] 2026-01-15 07:26:44,203 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,203 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,203 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,203 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,204 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 02:27:18] 2026-01-15 07:26:44,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,205 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 02:27:18] 2026-01-15 07:26:44,205 | INFO     | job 6970067342 has completed (purged errors)
[2026-01-15 02:27:18] 2026-01-15 07:26:44,205 | INFO     | overall cleanup function is called
[2026-01-15 02:27:18] 2026-01-15 07:26:44,899 | INFO     | PID=156642 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 02:27:18] 2026-01-15 07:26:44,899 | INFO     | .. there are 23 such processes running
[2026-01-15 02:27:18] 2026-01-15 07:26:45,232 | INFO     | --- collectZombieJob: --- 10, [189590]
[2026-01-15 02:27:18] 2026-01-15 07:26:45,232 | INFO     | zombie collector waiting for pid 189590
[2026-01-15 02:27:18] 2026-01-15 07:26:45,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 02:27:18] 2026-01-15 07:26:45,232 | INFO     | collected zombie processes
[2026-01-15 02:27:18] 2026-01-15 07:26:45,232 | INFO     | will attempt to kill all subprocesses of pid=189590
[2026-01-15 02:27:18] 2026-01-15 07:26:45,944 | INFO     | process IDs to be killed: [189590] (in reverse order)
[2026-01-15 02:27:18] 2026-01-15 07:26:46,206 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 02:27:18] 2026-01-15 07:26:46,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 02:27:18] 2026-01-15 07:26:46,259 | INFO     | did not find any defunct processes belonging to 189590
[2026-01-15 02:27:18] 2026-01-15 07:26:46,296 | INFO     | did not find any defunct processes belonging to 189590
[2026-01-15 02:27:18] 2026-01-15 07:26:46,297 | INFO     | ready for new job
[2026-01-15 02:27:18] 2026-01-15 07:26:46,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 02:27:18] 2026-01-15 07:26:46,299 | INFO     | ***************************************
[2026-01-15 02:27:18] 2026-01-15 07:26:46,299 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 02:27:18] 2026-01-15 07:26:46,299 | INFO     | ***************************************
[2026-01-15 02:27:18] 2026-01-15 07:26:46,299 | INFO     | 
[2026-01-15 02:27:18] 2026-01-15 07:26:46,313 | INFO     | architecture information:
[2026-01-15 02:27:18] 2026-01-15 07:26:46,317 | INFO     | executing command: cat /etc/os-release
[2026-01-15 02:27:18] 2026-01-15 07:26:46,373 | INFO     | cat /etc/os-release:
[2026-01-15 02:27:18] NAME="CentOS Linux"
[2026-01-15 02:27:18] VERSION="7 (Core)"
[2026-01-15 02:27:18] ID="centos"
[2026-01-15 02:27:18] ID_LIKE="rhel fedora"
[2026-01-15 02:27:18] VERSION_ID="7"
[2026-01-15 02:27:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 02:27:18] ANSI_COLOR="0;31"
[2026-01-15 02:27:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 02:27:18] HOME_URL="https://www.centos.org/"
[2026-01-15 02:27:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 02:27:18] 
[2026-01-15 02:27:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 02:27:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 02:27:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 02:27:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 02:27:18] 
[2026-01-15 02:27:18] 2026-01-15 07:26:46,374 | INFO     | ***************************************
[2026-01-15 02:27:18] 2026-01-15 07:26:46,877 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-15 02:27:18] 2026-01-15 07:26:46,943 | INFO     | sufficient remaining disk space (90447020032 B)
[2026-01-15 02:27:18] 2026-01-15 07:26:46,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 02:27:18] 2026-01-15 07:26:46,944 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 02:27:18] 2026-01-15 07:26:46,944 | INFO     | update_server=False
[2026-01-15 02:27:18] 2026-01-15 07:26:46,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 02:27:18] 2026-01-15 07:26:46,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 02:27:18] 2026-01-15 07:26:46,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 02:27:18] 2026-01-15 07:26:46,949 | INFO     | aborting loop
[2026-01-15 02:27:18] 2026-01-15 07:26:47,120 | INFO     | all job control threads have been joined
[2026-01-15 02:27:18] 2026-01-15 07:26:47,512 | INFO     | all payload control threads have been joined
[2026-01-15 02:27:18] 2026-01-15 07:26:47,951 | INFO     | [job] retrieve thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:47,955 | INFO     | [job] job monitor thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:47,956 | INFO     | all data control threads have been joined
[2026-01-15 02:27:18] 2026-01-15 07:26:47,976 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:48,126 | INFO     | [job] control thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:48,241 | INFO     | [data] copytool_in thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:48,518 | INFO     | [payload] control thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:48,595 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:48,841 | INFO     | [payload] failed_post thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:48,854 | INFO     | [job] validate thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:48,952 | INFO     | [data] copytool_out thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:48,962 | INFO     | [data] control thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:49,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 02:27:18] 2026-01-15 07:26:49,102 | INFO     | [payload] validate_post thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:49,150 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:49,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 02:27:18] 2026-01-15 07:26:50,168 | INFO     | [job] queue monitor thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:53,021 | INFO     | [monitor] cgroup control has ended
[2026-01-15 02:27:18] 2026-01-15 07:26:53,040 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:57,332 | INFO     | job.realtimelogging is not enabled
[2026-01-15 02:27:18] 2026-01-15 07:26:58,338 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 02:27:18] 2026-01-15 07:26:58,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168591132480)>', '<ExcThread(monitor, started 140168086394624)>']
[2026-01-15 02:27:18] 2026-01-15 07:27:03,793 | INFO     | all workflow threads have been joined
[2026-01-15 02:27:18] 2026-01-15 07:27:03,793 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 02:27:18] 2026-01-15 07:27:03,794 | INFO     | traces error code: 0
[2026-01-15 02:27:18] 2026-01-15 07:27:03,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 02:27:18] 2026-01-15 07:27:17,507 | INFO     | PID=156642 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 02:27:18] 2026-01-15 07:27:17,512 | INFO     | .. there are 23 such processes running
[2026-01-15 02:27:18] 2026-01-15 07:27:17,512 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 02:27:18] 2026-01-15 07:27:17,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 02:27:18] 2026-01-15 07:27:17,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 02:27:18] 2026-01-15 07:27:17,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 02:27:18] 2026-01-15 07:27:17,512 | INFO     | [monitor] control thread has ended
[2026-01-15 02:27:18] 2026-01-15 07:27:17,732 [wrapper] ==== pilot stdout END ====
[2026-01-15 02:27:18] 2026-01-15 07:27:17,734 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 02:27:18] 2026-01-15 07:27:17,736 [wrapper] pilotpid: 156642
[2026-01-15 02:27:18] 2026-01-15 07:27:17,739 [wrapper] Pilot exit status: 0
[2026-01-15 02:27:18] 2026-01-15 07:27:17,752 [wrapper] pandaids: 6970067342
[2026-01-15 02:27:18] 2026-01-15 07:27:17,835 [wrapper] cleanup supervisor_pilot  839270 156645
[2026-01-15 02:27:18] 2026-01-15 07:27:17,846 [wrapper] Test setup, not cleaning
[2026-01-15 02:27:18] 2026-01-15 07:27:17,874 [wrapper] apfmon messages muted
[2026-01-15 02:27:18] 2026-01-15 07:27:17,891 [wrapper] ==== wrapper stdout END ====
[2026-01-15 02:27:18] 2026-01-15 07:27:17,897 [wrapper] ==== wrapper stderr END ====
[2026-01-15 02:27:18]  *** Error codes and diagnostics ***
[2026-01-15 02:27:18]     "exeErrorCode": 0,
[2026-01-15 02:27:18]     "exeErrorDiag": "",
[2026-01-15 02:27:18]     "pilotErrorCode": 0,
[2026-01-15 02:27:18]     "pilotErrorDiag": "",
[2026-01-15 02:27:18]  *** Listing of results directory ***
[2026-01-15 02:27:18] total 738744
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 20:12 pilot3.tar.gz
[2026-01-15 02:27:18] -rwx------. 1 boincer umatlas     36322 Jan 14 20:16 runpilot2-wrapper.sh
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 20:19 queuedata.json
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas       100 Jan 15 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 02:27:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 00:01 run_atlas
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas       105 Jan 15 00:01 job.xml
[2026-01-15 02:27:18] -rw-r--r--. 2 boincer umatlas 594650657 Jan 15 00:01 EVNT.32794306._001646.pool.root.1
[2026-01-15 02:27:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 00:01 start_atlas.sh
[2026-01-15 02:27:18] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 00:01 shared
[2026-01-15 02:27:18] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 00:01 input.tar.gz
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas         0 Jan 15 00:01 boinc_lockfile
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 00:01 pandaJob.out
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas        57 Jan 15 00:01 setup.sh.local
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas    999472 Jan 15 00:02 agis_schedconf.cvmfs.json
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas   1516246 Jan 15 00:02 agis_ddmendpoints.agis.ALL.json
[2026-01-15 02:27:18] drwx------. 5 boincer umatlas      4096 Jan 15 00:02 pilot3
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas      6879 Jan 15 02:20 init_data.xml
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas 154858367 Jan 15 02:25 HITS.48215263._041306.pool.root.1
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas       530 Jan 15 02:25 boinc_task_state.xml
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas      1054 Jan 15 02:26 memory_monitor_summary.json
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas    406541 Jan 15 02:26 log.48215263._041306.job.log.tgz.1
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas        95 Jan 15 02:26 pilot_heartbeat.json
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas      7826 Jan 15 02:26 heartbeat.json
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas        27 Jan 15 02:27 wrapper_checkpoint.txt
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas       822 Jan 15 02:27 pilotlog.txt
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas   1112945 Jan 15 02:27 log.48215263._041306.job.log.1
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas       357 Jan 15 02:27 output.list
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 02:27 boinc_mmap_file
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas       620 Jan 15 02:27 runtime_log
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas   1536000 Jan 15 02:27 result.tar.gz
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas      9352 Jan 15 02:27 runtime_log.err
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas       654 Jan 15 02:27 rMrLDmx9Q08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSSnKDmGPdJSo.diag
[2026-01-15 02:27:18] -rw-r--r--. 1 boincer umatlas     21248 Jan 15 02:27 stderr.txt
[2026-01-15 02:27:18] HITS file was successfully produced:
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas 154858367 Jan 15 02:25 shared/HITS.pool.root.1
[2026-01-15 02:27:18]  *** Contents of shared directory: ***
[2026-01-15 02:27:18] total 734052
[2026-01-15 02:27:18] -rw-r--r--. 2 boincer umatlas 594650657 Jan 15 00:01 ATLAS.root_0
[2026-01-15 02:27:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 00:01 start_atlas.sh
[2026-01-15 02:27:18] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 00:01 input.tar.gz
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas 154858367 Jan 15 02:25 HITS.pool.root.1
[2026-01-15 02:27:18] -rw-------. 1 boincer umatlas   1536000 Jan 15 02:27 result.tar.gz
02:27:20 (142053): run_atlas exited; CPU time 29400.857779
02:27:20 (142053): called boinc_finish(0)

</stderr_txt>
]]>

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