Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:50:39 (18138): wrapper (7.7.26015): starting
09:50:39 (18138): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 09:50:39] Arguments: --nthreads 8
[2026-01-15 09:50:39] Threads: 8
[2026-01-15 09:50:39] Checking for CVMFS
[2026-01-15 09:50:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:50:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:50:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:50:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:50:43] 2.11.2.0 2467 43836 125904 155161 3 61 24401685 25165825 899 130560 0 20114287 99.821 12238589 2909 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-15 09:50:43] CVMFS is ok
[2026-01-15 09:50:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:50:43] Checking for apptainer binary...
[2026-01-15 09:50:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:50:43] Running /usr/bin/apptainer --version
[2026-01-15 09:50:43] apptainer version 1.3.2-1.el7
[2026-01-15 09:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:50:54] cg-vwn487.simple-grid.lan
[2026-01-15 09:50:54] apptainer works
[2026-01-15 09:50:55] Set ATHENA_PROC_NUMBER=8
[2026-01-15 09:50:55] Set ATHENA_CORE_NUMBER=8
[2026-01-15 09:50:55] Starting ATLAS job with PandaID=6970064365
[2026-01-15 09:50:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:25:27]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:25:27] 2026-01-15 11:24:45,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:25:27] 2026-01-15 11:24:45,292 | INFO     | time since job start (8984s) is within the limit (349056.0s)
[2026-01-15 12:25:27] 2026-01-15 11:24:47,299 | INFO     | time since job start (8986s) is within the limit (349056.0s)
[2026-01-15 12:25:27] 2026-01-15 11:24:47,754 | INFO     | monitor loop #707: job 0:6970064365 is in state 'finished'
[2026-01-15 12:25:27] 2026-01-15 11:24:47,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:25:27] 2026-01-15 11:24:47,930 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-01-15 12:25:27] 2026-01-15 11:24:48,526 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 12:25:27] 2026-01-15 11:24:48,527 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-15 12:25:27] 2026-01-15 11:24:48,529 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6970064365/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:25:27] 2026-01-15 11:24:48,530 | INFO     | extracted standard info from prmon json
[2026-01-15 12:25:27] 2026-01-15 11:24:48,530 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:25:27] 2026-01-15 11:24:48,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:25:27] 2026-01-15 11:24:48,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:25:27] 2026-01-15 11:24:48,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:25:27] 2026-01-15 11:24:48,540 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:25:27] 2026-01-15 11:24:48,540 | INFO     | sum of square deviations: 797291228.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,541 | INFO     | sum of deviations: 46090445392.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,541 | INFO     | mean x: 1768471991.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,542 | INFO     | mean y: 2422934.4671532847
[2026-01-15 12:25:27] 2026-01-15 11:24:48,542 | INFO     | intersect: -102230812382.73744
[2026-01-15 12:25:27] 2026-01-15 11:24:48,542 | INFO     | chi2: 5.702554664477768
[2026-01-15 12:25:27] 2026-01-15 11:24:48,542 | INFO     | sum of square deviations: 713140813.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,543 | INFO     | sum of deviations: 53106941356.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,543 | INFO     | mean x: 1768471838.5
[2026-01-15 12:25:27] 2026-01-15 11:24:48,544 | INFO     | mean y: 2435156.757575758
[2026-01-15 12:25:27] 2026-01-15 11:24:48,544 | INFO     | intersect: -131694038393.63086
[2026-01-15 12:25:27] 2026-01-15 11:24:48,544 | INFO     | chi2: 5.002424622844678
[2026-01-15 12:25:27] 2026-01-15 11:24:48,544 | INFO     | current chi2=5.002424622844678 (change=12.277480582419061 %)
[2026-01-15 12:25:27] 2026-01-15 11:24:48,544 | INFO     | right removable region: 131
[2026-01-15 12:25:27] 2026-01-15 11:24:48,545 | INFO     | sum of square deviations: 713140813.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,545 | INFO     | sum of deviations: -646796054.000001
[2026-01-15 12:25:27] 2026-01-15 11:24:48,546 | INFO     | mean x: 1768472143.5
[2026-01-15 12:25:27] 2026-01-15 11:24:48,546 | INFO     | mean y: 2507501.606060606
[2026-01-15 12:25:27] 2026-01-15 11:24:48,546 | INFO     | intersect: 1606455534.2714179
[2026-01-15 12:25:27] 2026-01-15 11:24:48,546 | INFO     | chi2: 0.9511263163890249
[2026-01-15 12:25:27] 2026-01-15 11:24:48,546 | INFO     | current chi2=0.9511263163890249 (change=83.32104868167664 %)
[2026-01-15 12:25:27] 2026-01-15 11:24:48,547 | INFO     | sum of square deviations: 635130048.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,547 | INFO     | sum of deviations: -7131755342.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,548 | INFO     | mean x: 1768472296.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,548 | INFO     | mean y: 2519967.440944882
[2026-01-15 12:25:27] 2026-01-15 11:24:48,548 | INFO     | intersect: 19860361340.07429
[2026-01-15 12:25:27] 2026-01-15 11:24:48,548 | INFO     | chi2: 0.8111459041880994
[2026-01-15 12:25:27] 2026-01-15 11:24:48,548 | INFO     | current chi2=0.8111459041880994 (change=14.71733141948639 %)
[2026-01-15 12:25:27] 2026-01-15 11:24:48,549 | INFO     | left removable region: 20
[2026-01-15 12:25:27] 2026-01-15 11:24:48,549 | INFO     | sum of square deviations: 424045160.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,549 | INFO     | sum of deviations: 1146675255.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,550 | INFO     | mean x: 1768472418.0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,550 | INFO     | mean y: 2537322.5225225226
[2026-01-15 12:25:27] 2026-01-15 11:24:48,550 | INFO     | intersect: -4779650406.894355
[2026-01-15 12:25:27] 2026-01-15 11:24:48,550 | INFO     | chi2: 0.0001699035975630761
[2026-01-15 12:25:27] 2026-01-15 11:24:48,550 | INFO     | current memory leak: 2.70 B/s (using 111 data points, chi2=0.00)
[2026-01-15 12:25:27] 2026-01-15 11:24:48,551 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-15 12:25:27] 2026-01-15 11:24:48,551 | INFO     | ..............................
[2026-01-15 12:25:27] 2026-01-15 11:24:48,551 | INFO     | . Timing measurements:
[2026-01-15 12:25:27] 2026-01-15 11:24:48,557 | INFO     | . get job = 0 s
[2026-01-15 12:25:27] 2026-01-15 11:24:48,557 | INFO     | . initial setup = 11 s
[2026-01-15 12:25:27] 2026-01-15 11:24:48,557 | INFO     | . payload setup = 142 s
[2026-01-15 12:25:27] 2026-01-15 11:24:48,557 | INFO     | . stage-in = 0 s
[2026-01-15 12:25:27] 2026-01-15 11:24:48,557 | INFO     | . payload execution = 8495 s
[2026-01-15 12:25:27] 2026-01-15 11:24:48,557 | INFO     | . stage-out = 2 s
[2026-01-15 12:25:27] 2026-01-15 11:24:48,557 | INFO     | . log creation = 1 s
[2026-01-15 12:25:27] 2026-01-15 11:24:48,558 | INFO     | ..............................
[2026-01-15 12:25:27] 2026-01-15 11:24:48,723 | INFO     | 
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | job summary report
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | --------------------------------------------------
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | PanDA job id: 6970064365
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | task id: 48215263
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | errors: (none)
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | pilot state: finished 
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | transexitcode: 0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | exeerrorcode: 0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | exeerrordiag: 
[2026-01-15 12:25:27] 2026-01-15 11:24:48,724 | INFO     | exitcode: 0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | exitmsg: OK
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | cpuconsumptiontime: 35861 s
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | nevents: 400
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | neventsw: 0
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | pid: 28333
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | pgrp: 28333
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | corecount: 8
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | event service: False
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | sizes: {0: 2283123, 1: 2283808, 2: 2284007, 13: 2284007, 23: 2284063, 34: 2284091, 45: 2284247, 55: 2284275, 66: 2284303, 77: 2284331, 88: 2284387, 98: 2284695, 10
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | --------------------------------------------------
[2026-01-15 12:25:27] 2026-01-15 11:24:48,725 | INFO     | 
[2026-01-15 12:25:27] 2026-01-15 11:24:48,726 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-15 12:25:27] 2026-01-15 11:24:49,296 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,296 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,297 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,297 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,298 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:25:27] 2026-01-15 11:24:49,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,298 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:25:27] 2026-01-15 11:24:49,299 | INFO     | job 6970064365 has completed (purged errors)
[2026-01-15 12:25:27] 2026-01-15 11:24:49,299 | INFO     | overall cleanup function is called
[2026-01-15 12:25:27] 2026-01-15 11:24:50,307 | INFO     | --- collectZombieJob: --- 10, [28333]
[2026-01-15 12:25:27] 2026-01-15 11:24:50,308 | INFO     | zombie collector waiting for pid 28333
[2026-01-15 12:25:27] 2026-01-15 11:24:50,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:25:27] 2026-01-15 11:24:50,308 | INFO     | collected zombie processes
[2026-01-15 12:25:27] 2026-01-15 11:24:50,308 | INFO     | will attempt to kill all subprocesses of pid=28333
[2026-01-15 12:25:27] 2026-01-15 11:24:50,386 | INFO     | process IDs to be killed: [28333] (in reverse order)
[2026-01-15 12:25:27] 2026-01-15 11:24:51,286 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:25:27] 2026-01-15 11:24:51,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:25:27] 2026-01-15 11:24:51,288 | INFO     | did not find any defunct processes belonging to 28333
[2026-01-15 12:25:27] 2026-01-15 11:24:51,290 | INFO     | did not find any defunct processes belonging to 28333
[2026-01-15 12:25:27] 2026-01-15 11:24:51,291 | INFO     | ready for new job
[2026-01-15 12:25:27] 2026-01-15 11:24:51,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:25:27] 2026-01-15 11:24:51,293 | INFO     | ***************************************
[2026-01-15 12:25:27] 2026-01-15 11:24:51,293 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:25:27] 2026-01-15 11:24:51,293 | INFO     | ***************************************
[2026-01-15 12:25:27] 2026-01-15 11:24:51,293 | INFO     | 
[2026-01-15 12:25:27] 2026-01-15 11:24:51,294 | INFO     | pilot is running in a VM
[2026-01-15 12:25:27] 2026-01-15 11:24:51,294 | INFO     | architecture information:
[2026-01-15 12:25:27] 2026-01-15 11:24:51,299 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:25:27] 2026-01-15 11:24:51,508 | INFO     | cat /etc/os-release:
[2026-01-15 12:25:27] NAME="CentOS Linux"
[2026-01-15 12:25:27] VERSION="7 (Core)"
[2026-01-15 12:25:27] ID="centos"
[2026-01-15 12:25:27] ID_LIKE="rhel fedora"
[2026-01-15 12:25:27] VERSION_ID="7"
[2026-01-15 12:25:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:25:27] ANSI_COLOR="0;31"
[2026-01-15 12:25:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:25:27] HOME_URL="https://www.centos.org/"
[2026-01-15 12:25:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:25:27] 
[2026-01-15 12:25:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:25:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:25:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:25:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:25:27] 
[2026-01-15 12:25:27] 2026-01-15 11:24:51,508 | INFO     | ***************************************
[2026-01-15 12:25:27] 2026-01-15 11:24:52,012 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-15 12:25:27] 2026-01-15 11:24:52,325 | INFO     | sufficient remaining disk space (493936967680 B)
[2026-01-15 12:25:27] 2026-01-15 11:24:52,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:25:27] 2026-01-15 11:24:52,326 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:25:27] 2026-01-15 11:24:52,326 | INFO     | update_server=False
[2026-01-15 12:25:27] 2026-01-15 11:24:52,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:25:27] 2026-01-15 11:24:52,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:25:27] 2026-01-15 11:24:52,734 | INFO     | all payload control threads have been joined
[2026-01-15 12:25:27] 2026-01-15 11:24:52,772 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 12:25:27] 2026-01-15 11:24:52,773 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 12:25:27] 2026-01-15 11:24:52,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:25:27] 2026-01-15 11:24:52,773 | INFO     | will abort loop
[2026-01-15 12:25:27] 2026-01-15 11:24:52,832 | INFO     | all data control threads have been joined
[2026-01-15 12:25:27] 2026-01-15 11:24:53,333 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:53,384 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:53,589 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:53,603 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:53,634 | INFO     | all job control threads have been joined
[2026-01-15 12:25:27] 2026-01-15 11:24:53,701 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:25:27] 2026-01-15 11:24:53,741 | INFO     | [payload] control thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:53,779 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:53,814 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:53,839 | INFO     | [data] control thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:54,092 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:54,115 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:54,253 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:54,574 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:54,640 | INFO     | [job] control thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:54,686 | INFO     | [job] validate thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:54,707 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:24:55,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:25:27] 2026-01-15 11:24:59,306 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:25:27] 2026-01-15 11:25:15,854 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:25:27] 2026-01-15 11:25:16,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175820314432)>', '<ExcThread(monitor, started 140175233505024)>']
[2026-01-15 12:25:27] 2026-01-15 11:25:20,427 | INFO     | PID=21864 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 12:25:27] 2026-01-15 11:25:20,427 | INFO     | .. there are 2 such processes running
[2026-01-15 12:25:27] 2026-01-15 11:25:20,427 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:25:27] 2026-01-15 11:25:20,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:25:27] 2026-01-15 11:25:20,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:25:27] 2026-01-15 11:25:20,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:25:27] 2026-01-15 11:25:20,428 | INFO     | [monitor] control thread has ended
[2026-01-15 12:25:27] 2026-01-15 11:25:21,327 | INFO     | all workflow threads have been joined
[2026-01-15 12:25:27] 2026-01-15 11:25:21,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:25:27] 2026-01-15 11:25:21,328 | INFO     | traces error code: 0
[2026-01-15 12:25:27] 2026-01-15 11:25:21,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:25:27] 2026-01-15 11:25:22,961 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:25:27] 2026-01-15 11:25:23,043 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:25:27] 2026-01-15 11:25:23,137 [wrapper] pilotpid: 21864
[2026-01-15 12:25:27] 2026-01-15 11:25:23,345 [wrapper] Pilot exit status: 0
[2026-01-15 12:25:27] 2026-01-15 11:25:23,812 [wrapper] pandaids: 6970064365
[2026-01-15 12:25:27] 2026-01-15 11:25:24,842 [wrapper] cleanup supervisor_pilot 25808 21865
[2026-01-15 12:25:27] 2026-01-15 11:25:24,890 [wrapper] Test setup, not cleaning
[2026-01-15 12:25:27] 2026-01-15 11:25:24,975 [wrapper] apfmon messages muted
[2026-01-15 12:25:27] 2026-01-15 11:25:25,079 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:25:27] 2026-01-15 11:25:25,168 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:25:27]  *** Error codes and diagnostics ***
[2026-01-15 12:25:27]     "exeErrorCode": 0,
[2026-01-15 12:25:27]     "exeErrorDiag": "",
[2026-01-15 12:25:27]     "pilotErrorCode": 0,
[2026-01-15 12:25:27]     "pilotErrorDiag": "",
[2026-01-15 12:25:27]  *** Listing of results directory ***
[2026-01-15 12:25:27] total 739152
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc    579449 Jan 15 02:12 pilot3.tar.gz
[2026-01-15 12:25:27] -rwx------. 1 boinc boinc     36322 Jan 15 02:16 runpilot2-wrapper.sh
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc      5112 Jan 15 02:19 queuedata.json
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc       100 Jan 15 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:25:27] -rwxr-xr-x. 1 boinc boinc      7986 Jan 15 09:50 run_atlas
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc       105 Jan 15 09:50 job.xml
[2026-01-15 12:25:27] -rw-r--r--. 2 boinc boinc 592877274 Jan 15 09:50 EVNT.32794306._001612.pool.root.1
[2026-01-15 12:25:27] -rw-r--r--. 2 boinc boinc     15847 Jan 15 09:50 start_atlas.sh
[2026-01-15 12:25:27] drwxrwx--x. 2 boinc boinc        68 Jan 15 09:50 shared
[2026-01-15 12:25:27] -rw-r--r--. 2 boinc boinc    592404 Jan 15 09:50 input.tar.gz
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc      6390 Jan 15 09:50 init_data.xml
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc         0 Jan 15 09:50 boinc_lockfile
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc      2508 Jan 15 09:50 pandaJob.out
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc    999472 Jan 15 09:54 agis_schedconf.cvmfs.json
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc   1516246 Jan 15 09:54 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:25:27] drwx------. 5 boinc boinc      4096 Jan 15 09:55 pilot3
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc 156942823 Jan 15 12:21 HITS.48215263._040435.pool.root.1
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc       531 Jan 15 12:21 boinc_task_state.xml
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc      1018 Jan 15 12:22 memory_monitor_summary.json
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc    370900 Jan 15 12:22 log.48215263._040435.job.log.tgz.1
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc        95 Jan 15 12:24 pilot_heartbeat.json
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc      7773 Jan 15 12:24 heartbeat.json
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc      8192 Jan 15 12:25 boinc_mmap_file
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc        27 Jan 15 12:25 wrapper_checkpoint.txt
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc      5070 Jan 15 12:25 pilotlog.txt
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc   1210864 Jan 15 12:25 log.48215263._040435.job.log.1
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc       357 Jan 15 12:25 output.list
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc       620 Jan 15 12:25 runtime_log
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc   1597440 Jan 15 12:25 result.tar.gz
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc      8816 Jan 15 12:25 runtime_log.err
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc       652 Jan 15 12:25 JmHKDma9Q08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLQnKDmQkEOxn.diag
[2026-01-15 12:25:27] -rw-r--r--. 1 boinc boinc     20949 Jan 15 12:25 stderr.txt
[2026-01-15 12:25:27] HITS file was successfully produced:
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc 156942823 Jan 15 12:21 shared/HITS.pool.root.1
[2026-01-15 12:25:27]  *** Contents of shared directory: ***
[2026-01-15 12:25:27] total 734408
[2026-01-15 12:25:27] -rw-r--r--. 2 boinc boinc 592877274 Jan 15 09:50 ATLAS.root_0
[2026-01-15 12:25:27] -rw-r--r--. 2 boinc boinc     15847 Jan 15 09:50 start_atlas.sh
[2026-01-15 12:25:27] -rw-r--r--. 2 boinc boinc    592404 Jan 15 09:50 input.tar.gz
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc 156942823 Jan 15 12:21 HITS.pool.root.1
[2026-01-15 12:25:27] -rw-------. 1 boinc boinc   1597440 Jan 15 12:25 result.tar.gz
12:25:28 (18138): run_atlas exited; CPU time 35933.939099
12:25:28 (18138): called boinc_finish(0)

</stderr_txt>
]]>

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