Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:45:38 (5904): wrapper (7.7.26015): starting
23:45:38 (5904): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 23:45:38] Arguments: --nthreads 8
[2026-01-14 23:45:38] Threads: 8
[2026-01-14 23:45:38] Checking for CVMFS
[2026-01-14 23:45:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 23:45:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 23:45:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 23:45:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 23:45:39] 2.11.2.0 2913 118957 113848 155156 3 56 19982587 20275200 1 130560 0 24684107 99.743 8402602 32473 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 23:45:39] CVMFS is ok
[2026-01-14 23:45:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 23:45:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 23:45:39] Further information can be found at the LHC@home message board.
[2026-01-14 23:45:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 23:45:39] Checking for apptainer binary...
[2026-01-14 23:45:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 23:45:39] Running /usr/bin/apptainer --version
[2026-01-14 23:45:39] apptainer version 1.3.2-1.el7
[2026-01-14 23:45:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 23:45:40] c-204-29.aglt2.org
[2026-01-14 23:45:40] apptainer works
[2026-01-14 23:45:40] Set ATHENA_PROC_NUMBER=8
[2026-01-14 23:45:40] Set ATHENA_CORE_NUMBER=8
[2026-01-14 23:45:41] Starting ATLAS job with PandaID=6969984328
[2026-01-14 23:45:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 01:07:11]  *** The last 200 lines of the pilot log: ***
[2026-01-15 01:07:11]  protocol_id=None
[2026-01-15 01:07:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 01:07:11]  replicas=None
[2026-01-15 01:07:11]  scope=mc23_13p6TeV
[2026-01-15 01:07:11]  status=None
[2026-01-15 01:07:11]  status_code=0
[2026-01-15 01:07:11]  storage_token=
[2026-01-15 01:07:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969984328/log.48215263._039756.job.log.tgz.1
[2026-01-15 01:07:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/d7/log.48215263._039756.job.log.tgz.1
[2026-01-15 01:07:11]  workdir=None
[2026-01-15 01:07:11] ]
[2026-01-15 01:07:11] 2026-01-15 06:05:58,417 | INFO     | transferring file log.48215263._039756.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969984328/log.48215263._039756.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 01:07:11] 2026-01-15 06:05:58,418 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969984328/log.48215263._039756.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._039756.job
[2026-01-15 01:07:11] 2026-01-15 06:05:58,445 | INFO     | adding to output.list: log.48215263._039756.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/d7/log.48215263._039756.job.log.tg
[2026-01-15 01:07:11] 2026-01-15 06:05:58,447 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 01:07:11] 2026-01-15 06:05:58,447 | INFO     | summary of transferred files:
[2026-01-15 01:07:11] 2026-01-15 06:05:58,447 | INFO     |  -- lfn=log.48215263._039756.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 01:07:11] 2026-01-15 06:05:58,448 | INFO     | stage-out finished correctly
[2026-01-15 01:07:11] 2026-01-15 06:05:59,206 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 01:07:11] 2026-01-15 06:05:59,346 | INFO     | time since job start (4801s) is within the limit (349056.0s)
[2026-01-15 01:07:11] 2026-01-15 06:06:00,746 | INFO     | monitor loop #357: job 0:6969984328 is in state 'finished'
[2026-01-15 01:07:11] 2026-01-15 06:06:00,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 01:07:11] 2026-01-15 06:06:01,349 | INFO     | time since job start (4803s) is within the limit (349056.0s)
[2026-01-15 01:07:11] 2026-01-15 06:06:02,188 | INFO     | job 6969984328 has state=finished
[2026-01-15 01:07:11] 2026-01-15 06:06:02,188 | INFO     | preparing for final server update for job 6969984328 in state='finished'
[2026-01-15 01:07:11] 2026-01-15 06:06:02,189 | INFO     | this job has now completed (state=finished)
[2026-01-15 01:07:11] 2026-01-15 06:06:02,189 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 01:07:11] 2026-01-15 06:06:02,190 | INFO     | log transfer has been attempted: DONE
[2026-01-15 01:07:11] 2026-01-15 06:06:02,190 | INFO     | job 6969984328 has finished - writing final server update
[2026-01-15 01:07:11] 2026-01-15 06:06:02,190 | INFO     | total number of processed events: 400 (read)
[2026-01-15 01:07:11] 2026-01-15 06:06:02,191 | INFO     | executing command: lscpu
[2026-01-15 01:07:11] 2026-01-15 06:06:02,228 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 01:07:11] 2026-01-15 06:06:03,250 | INFO     | monitor loop #358: job 0:6969984328 is in state 'finished'
[2026-01-15 01:07:11] 2026-01-15 06:06:03,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 01:07:11] 2026-01-15 06:06:03,355 | INFO     | time since job start (4805s) is within the limit (349056.0s)
[2026-01-15 01:07:11] 2026-01-15 06:06:05,361 | INFO     | time since job start (4807s) is within the limit (349056.0s)
[2026-01-15 01:07:11] 2026-01-15 06:06:05,753 | INFO     | monitor loop #359: job 0:6969984328 is in state 'finished'
[2026-01-15 01:07:11] 2026-01-15 06:06:05,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 01:07:11] 2026-01-15 06:06:07,366 | INFO     | time since job start (4809s) is within the limit (349056.0s)
[2026-01-15 01:07:11] 2026-01-15 06:06:08,005 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 01:07:11] 2026-01-15 06:06:08,009 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2026-01-15 01:07:11] 2026-01-15 06:06:08,011 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969984328/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 01:07:11] 2026-01-15 06:06:08,012 | INFO     | extracted standard info from prmon json
[2026-01-15 01:07:11] 2026-01-15 06:06:08,012 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 01:07:11] 2026-01-15 06:06:08,013 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 01:07:11] 2026-01-15 06:06:08,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 01:07:11] 2026-01-15 06:06:08,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 01:07:11] 2026-01-15 06:06:08,016 | INFO     | fitting pss+swap vs Time
[2026-01-15 01:07:11] 2026-01-15 06:06:08,017 | INFO     | sum of square deviations: 115715658.0
[2026-01-15 01:07:11] 2026-01-15 06:06:08,018 | INFO     | sum of deviations: -9318461046.5
[2026-01-15 01:07:11] 2026-01-15 06:06:08,018 | INFO     | mean x: 1768454860.5
[2026-01-15 01:07:11] 2026-01-15 06:06:08,018 | INFO     | mean y: 2653164.5694444445
[2026-01-15 01:07:11] 2026-01-15 06:06:08,018 | INFO     | intersect: 142414475513.3033
[2026-01-15 01:07:11] 2026-01-15 06:06:08,018 | INFO     | chi2: 0.06238979170775346
[2026-01-15 01:07:11] 2026-01-15 06:06:08,019 | INFO     | current memory leak: -80.53 B/s (using 72 data points, chi2=0.06)
[2026-01-15 01:07:11] 2026-01-15 06:06:08,019 | INFO     | could have reported an average CPU frequency of 1892 MHz (6 samples)
[2026-01-15 01:07:11] 2026-01-15 06:06:08,019 | INFO     | ..............................
[2026-01-15 01:07:11] 2026-01-15 06:06:08,019 | INFO     | . Timing measurements:
[2026-01-15 01:07:11] 2026-01-15 06:06:08,019 | INFO     | . get job = 0 s
[2026-01-15 01:07:11] 2026-01-15 06:06:08,020 | INFO     | . initial setup = 2 s
[2026-01-15 01:07:11] 2026-01-15 06:06:08,020 | INFO     | . payload setup = 8 s
[2026-01-15 01:07:11] 2026-01-15 06:06:08,020 | INFO     | . stage-in = 0 s
[2026-01-15 01:07:11] 2026-01-15 06:06:08,020 | INFO     | . payload execution = 4769 s
[2026-01-15 01:07:11] 2026-01-15 06:06:08,020 | INFO     | . stage-out = 0 s
[2026-01-15 01:07:11] 2026-01-15 06:06:08,020 | INFO     | . log creation = 0 s
[2026-01-15 01:07:11] 2026-01-15 06:06:08,020 | INFO     | ..............................
[2026-01-15 01:07:11] 2026-01-15 06:06:08,127 | INFO     | 
[2026-01-15 01:07:11] 2026-01-15 06:06:08,127 | INFO     | job summary report
[2026-01-15 01:07:11] 2026-01-15 06:06:08,127 | INFO     | --------------------------------------------------
[2026-01-15 01:07:11] 2026-01-15 06:06:08,128 | INFO     | PanDA job id: 6969984328
[2026-01-15 01:07:11] 2026-01-15 06:06:08,128 | INFO     | task id: 48215263
[2026-01-15 01:07:11] 2026-01-15 06:06:08,128 | INFO     | errors: (none)
[2026-01-15 01:07:11] 2026-01-15 06:06:08,128 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 01:07:11] 2026-01-15 06:06:08,128 | INFO     | pilot state: finished 
[2026-01-15 01:07:11] 2026-01-15 06:06:08,128 | INFO     | transexitcode: 0
[2026-01-15 01:07:11] 2026-01-15 06:06:08,129 | INFO     | exeerrorcode: 0
[2026-01-15 01:07:11] 2026-01-15 06:06:08,129 | INFO     | exeerrordiag: 
[2026-01-15 01:07:11] 2026-01-15 06:06:08,129 | INFO     | exitcode: 0
[2026-01-15 01:07:11] 2026-01-15 06:06:08,129 | INFO     | exitmsg: OK
[2026-01-15 01:07:11] 2026-01-15 06:06:08,129 | INFO     | cpuconsumptiontime: 35449 s
[2026-01-15 01:07:11] 2026-01-15 06:06:08,129 | INFO     | nevents: 400
[2026-01-15 01:07:11] 2026-01-15 06:06:08,130 | INFO     | neventsw: 0
[2026-01-15 01:07:11] 2026-01-15 06:06:08,130 | INFO     | pid: 16083
[2026-01-15 01:07:11] 2026-01-15 06:06:08,130 | INFO     | pgrp: 16083
[2026-01-15 01:07:11] 2026-01-15 06:06:08,130 | INFO     | corecount: 8
[2026-01-15 01:07:11] 2026-01-15 06:06:08,130 | INFO     | event service: False
[2026-01-15 01:07:11] 2026-01-15 06:06:08,130 | INFO     | sizes: {0: 2283951, 6: 2284213, 11: 2284241, 4781: 2310428, 4783: 2319482, 4792: 2319620}
[2026-01-15 01:07:11] 2026-01-15 06:06:08,131 | INFO     | --------------------------------------------------
[2026-01-15 01:07:11] 2026-01-15 06:06:08,131 | INFO     | 
[2026-01-15 01:07:11] 2026-01-15 06:06:08,131 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 01:07:11] 2026-01-15 06:06:08,159 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,159 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,160 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,160 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,162 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 01:07:11] 2026-01-15 06:06:08,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,163 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 01:07:11] 2026-01-15 06:06:08,163 | INFO     | job 6969984328 has completed (purged errors)
[2026-01-15 01:07:11] 2026-01-15 06:06:08,163 | INFO     | overall cleanup function is called
[2026-01-15 01:07:11] 2026-01-15 06:06:09,172 | INFO     | --- collectZombieJob: --- 10, [16083]
[2026-01-15 01:07:11] 2026-01-15 06:06:09,172 | INFO     | zombie collector waiting for pid 16083
[2026-01-15 01:07:11] 2026-01-15 06:06:09,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 01:07:11] 2026-01-15 06:06:09,172 | INFO     | collected zombie processes
[2026-01-15 01:07:11] 2026-01-15 06:06:09,172 | INFO     | will attempt to kill all subprocesses of pid=16083
[2026-01-15 01:07:11] 2026-01-15 06:06:09,266 | INFO     | process IDs to be killed: [16083] (in reverse order)
[2026-01-15 01:07:11] 2026-01-15 06:06:09,324 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 01:07:11] 2026-01-15 06:06:09,324 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 01:07:11] 2026-01-15 06:06:09,329 | INFO     | did not find any defunct processes belonging to 16083
[2026-01-15 01:07:11] 2026-01-15 06:06:09,332 | INFO     | did not find any defunct processes belonging to 16083
[2026-01-15 01:07:11] 2026-01-15 06:06:09,333 | INFO     | ready for new job
[2026-01-15 01:07:11] 2026-01-15 06:06:09,333 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 01:07:11] 2026-01-15 06:06:09,335 | INFO     | ***************************************
[2026-01-15 01:07:11] 2026-01-15 06:06:09,335 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 01:07:11] 2026-01-15 06:06:09,335 | INFO     | ***************************************
[2026-01-15 01:07:11] 2026-01-15 06:06:09,335 | INFO     | 
[2026-01-15 01:07:11] 2026-01-15 06:06:09,336 | INFO     | architecture information:
[2026-01-15 01:07:11] 2026-01-15 06:06:09,336 | INFO     | executing command: cat /etc/os-release
[2026-01-15 01:07:11] 2026-01-15 06:06:09,355 | INFO     | cat /etc/os-release:
[2026-01-15 01:07:11] NAME="CentOS Linux"
[2026-01-15 01:07:11] VERSION="7 (Core)"
[2026-01-15 01:07:11] ID="centos"
[2026-01-15 01:07:11] ID_LIKE="rhel fedora"
[2026-01-15 01:07:11] VERSION_ID="7"
[2026-01-15 01:07:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 01:07:11] ANSI_COLOR="0;31"
[2026-01-15 01:07:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 01:07:11] HOME_URL="https://www.centos.org/"
[2026-01-15 01:07:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 01:07:11] 
[2026-01-15 01:07:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 01:07:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 01:07:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 01:07:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 01:07:11] 
[2026-01-15 01:07:11] 2026-01-15 06:06:09,356 | INFO     | ***************************************
[2026-01-15 01:07:11] 2026-01-15 06:06:09,859 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 01:07:11] 2026-01-15 06:06:09,880 | INFO     | sufficient remaining disk space (17848860672 B)
[2026-01-15 01:07:11] 2026-01-15 06:06:09,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 01:07:11] 2026-01-15 06:06:09,881 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 01:07:11] 2026-01-15 06:06:09,881 | INFO     | update_server=False
[2026-01-15 01:07:11] 2026-01-15 06:06:09,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 01:07:11] 2026-01-15 06:06:09,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 01:07:11] 2026-01-15 06:06:09,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 01:07:11] 2026-01-15 06:06:09,882 | INFO     | aborting loop
[2026-01-15 01:07:11] 2026-01-15 06:06:09,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 01:07:11] 2026-01-15 06:06:09,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 01:07:11] 2026-01-15 06:06:10,095 | INFO     | all payload control threads have been joined
[2026-01-15 01:07:11] 2026-01-15 06:06:10,307 | INFO     | all data control threads have been joined
[2026-01-15 01:07:11] 2026-01-15 06:06:10,886 | INFO     | [job] job monitor thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:10,886 | INFO     | [job] retrieve thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:10,889 | INFO     | [job] queue monitor thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:11,101 | INFO     | [payload] control thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:11,224 | INFO     | all job control threads have been joined
[2026-01-15 01:07:11] 2026-01-15 06:06:11,308 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:11,313 | INFO     | [data] control thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:11,725 | INFO     | [payload] failed_post thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:11,835 | INFO     | [data] copytool_in thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:11,841 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:11,842 | INFO     | [job] validate thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:11,889 | INFO     | [data] copytool_out thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:12,052 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:12,229 | INFO     | [job] control thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:12,315 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:12,333 | INFO     | [payload] validate_post thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:13,890 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 01:07:11] 2026-01-15 06:06:40,580 | INFO     | PID=9673 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-15 01:07:11] 2026-01-15 06:06:40,581 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 01:07:11] 2026-01-15 06:06:40,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 01:07:11] 2026-01-15 06:06:40,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 01:07:11] 2026-01-15 06:07:05,707 | INFO     | [monitor] cgroup control has ended
[2026-01-15 01:07:11] 2026-01-15 06:07:06,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770713683776)>', '<ExcThread(monitor, started 139769912751872)>']
[2026-01-15 01:07:11] 2026-01-15 06:07:06,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 01:07:11] 2026-01-15 06:07:06,705 | INFO     | [monitor] control thread has ended
[2026-01-15 01:07:11] 2026-01-15 06:07:11,209 | INFO     | all workflow threads have been joined
[2026-01-15 01:07:11] 2026-01-15 06:07:11,214 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 01:07:11] 2026-01-15 06:07:11,215 | INFO     | traces error code: 0
[2026-01-15 01:07:11] 2026-01-15 06:07:11,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 01:07:11] 2026-01-15 06:07:11,340 [wrapper] ==== pilot stdout END ====
[2026-01-15 01:07:11] 2026-01-15 06:07:11,345 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 01:07:11] 2026-01-15 06:07:11,350 [wrapper] pilotpid: 9673
[2026-01-15 01:07:11] 2026-01-15 06:07:11,355 [wrapper] Pilot exit status: 0
[2026-01-15 01:07:11] 2026-01-15 06:07:11,373 [wrapper] pandaids: 6969984328
[2026-01-15 01:07:11] 2026-01-15 06:07:11,428 [wrapper] cleanup supervisor_pilot 19239 9674
[2026-01-15 01:07:11] 2026-01-15 06:07:11,432 [wrapper] Test setup, not cleaning
[2026-01-15 01:07:11] 2026-01-15 06:07:11,437 [wrapper] apfmon messages muted
[2026-01-15 01:07:11] 2026-01-15 06:07:11,442 [wrapper] ==== wrapper stdout END ====
[2026-01-15 01:07:11] 2026-01-15 06:07:11,446 [wrapper] ==== wrapper stderr END ====
[2026-01-15 01:07:11]  *** Error codes and diagnostics ***
[2026-01-15 01:07:11]     "exeErrorCode": 0,
[2026-01-15 01:07:11]     "exeErrorDiag": "",
[2026-01-15 01:07:11]     "pilotErrorCode": 0,
[2026-01-15 01:07:11]     "pilotErrorDiag": "",
[2026-01-15 01:07:11]  *** Listing of results directory ***
[2026-01-15 01:07:11] total 736004
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 20:12 pilot3.tar.gz
[2026-01-15 01:07:11] -rwx------ 1 boincer umatlas     36322 Jan 14 20:16 runpilot2-wrapper.sh
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 20:19 queuedata.json
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas       100 Jan 14 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 01:07:11] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 23:45 run_atlas
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas       105 Jan 14 23:45 job.xml
[2026-01-15 01:07:11] -rw-r--r-- 2 boincer umatlas 596420794 Jan 14 23:45 EVNT.32794306._001585.pool.root.1
[2026-01-15 01:07:11] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 23:45 start_atlas.sh
[2026-01-15 01:07:11] drwxrwx--x 2 boincer umatlas      4096 Jan 14 23:45 shared
[2026-01-15 01:07:11] -rw-r--r-- 2 boincer umatlas    592407 Jan 14 23:45 input.tar.gz
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas         0 Jan 14 23:45 boinc_lockfile
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas      2508 Jan 14 23:45 pandaJob.out
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas        57 Jan 14 23:45 setup.sh.local
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas    999472 Jan 14 23:45 agis_schedconf.cvmfs.json
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas   1516246 Jan 14 23:45 agis_ddmendpoints.agis.ALL.json
[2026-01-15 01:07:11] drwx------ 5 boincer umatlas      4096 Jan 14 23:45 pilot3
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas      5910 Jan 15 01:04 init_data.xml
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas 151289298 Jan 15 01:05 HITS.48215263._039756.pool.root.1
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas       530 Jan 15 01:05 boinc_task_state.xml
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas      1046 Jan 15 01:05 memory_monitor_summary.json
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas    317581 Jan 15 01:05 log.48215263._039756.job.log.tgz.1
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas        95 Jan 15 01:06 pilot_heartbeat.json
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas      7846 Jan 15 01:06 heartbeat.json
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 01:06 boinc_mmap_file
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas        27 Jan 15 01:06 wrapper_checkpoint.txt
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas      4745 Jan 15 01:07 pilotlog.txt
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas    693112 Jan 15 01:07 log.48215263._039756.job.log.1
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas       357 Jan 15 01:07 output.list
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas       620 Jan 15 01:07 runtime_log
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas   1034240 Jan 15 01:07 result.tar.gz
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas      9342 Jan 15 01:07 runtime_log.err
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas       658 Jan 15 01:07 8xXMDmA9Q08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwMnKDmSWKTln.diag
[2026-01-15 01:07:11] -rw-r--r-- 1 boincer umatlas     21812 Jan 15 01:07 stderr.txt
[2026-01-15 01:07:11] HITS file was successfully produced:
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas 151289298 Jan 15 01:05 shared/HITS.pool.root.1
[2026-01-15 01:07:11]  *** Contents of shared directory: ***
[2026-01-15 01:07:11] total 731804
[2026-01-15 01:07:11] -rw-r--r-- 2 boincer umatlas 596420794 Jan 14 23:45 ATLAS.root_0
[2026-01-15 01:07:11] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 23:45 start_atlas.sh
[2026-01-15 01:07:11] -rw-r--r-- 2 boincer umatlas    592407 Jan 14 23:45 input.tar.gz
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas 151289298 Jan 15 01:05 HITS.pool.root.1
[2026-01-15 01:07:11] -rw------- 1 boincer umatlas   1034240 Jan 15 01:07 result.tar.gz
01:07:13 (5904): run_atlas exited; CPU time 35419.213399
01:07:13 (5904): called boinc_finish(0)

</stderr_txt>
]]>

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