Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:17:54 (2545083): wrapper (7.7.26015): starting
08:17:54 (2545083): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 08:17:54] Arguments: --nthreads 3
[2026-01-15 08:17:54] Threads: 3
[2026-01-15 08:17:54] Checking for CVMFS
[2026-01-15 08:17:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 08:17:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 08:17:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 08:17:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 08:17:54] 2.9.2.0 1812368 2044 67308 155160 0 56 20664480 36864001 0 130560 0 1982012 99.991 82747 17246 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 08:17:54] CVMFS is ok
[2026-01-15 08:17:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 08:17:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 08:17:54] Further information can be found at the LHC@home message board.
[2026-01-15 08:17:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 08:17:54] Checking for apptainer binary...
[2026-01-15 08:17:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 08:17:54] Running /usr/bin/apptainer --version
[2026-01-15 08:17:54] apptainer version 1.4.2-2.1
[2026-01-15 08:17:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 08:17:54] cosA133a
[2026-01-15 08:17:54] apptainer works
[2026-01-15 08:17:54] Set ATHENA_PROC_NUMBER=3
[2026-01-15 08:17:54] Set ATHENA_CORE_NUMBER=3
[2026-01-15 08:17:54] Starting ATLAS job with PandaID=6969709091
[2026-01-15 08:17:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 09:20:15]  *** The last 200 lines of the pilot log: ***
[2026-01-15 09:20:15]  protocol_id=None
[2026-01-15 09:20:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 09:20:15]  replicas=None
[2026-01-15 09:20:15]  scope=mc23_13p6TeV
[2026-01-15 09:20:15]  status=None
[2026-01-15 09:20:15]  status_code=0
[2026-01-15 09:20:15]  storage_token=
[2026-01-15 09:20:15]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6969709091/log.48215263._035297.job.log.tgz.1
[2026-01-15 09:20:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/c7/log.48215263._035297.job.log.tgz.1
[2026-01-15 09:20:15]  workdir=None
[2026-01-15 09:20:15] ]
[2026-01-15 09:20:15] 2026-01-15 08:19:31,544 | INFO     | transferring file log.48215263._035297.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6969709091/log.48215263._035297.job.log.tgz.1 to /local/data/boinc/
[2026-01-15 09:20:15] 2026-01-15 08:19:31,544 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6969709091/log.48215263._035297.job.log.tgz.1 /local/data/boinc/slots/0/log.48215263._0352
[2026-01-15 09:20:15] 2026-01-15 08:19:31,556 | INFO     | adding to output.list: log.48215263._035297.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/c7/log.48215263._035297.job.log.tg
[2026-01-15 09:20:15] 2026-01-15 08:19:31,556 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 09:20:15] 2026-01-15 08:19:31,556 | INFO     | summary of transferred files:
[2026-01-15 09:20:15] 2026-01-15 08:19:31,557 | INFO     |  -- lfn=log.48215263._035297.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 09:20:15] 2026-01-15 08:19:31,557 | INFO     | stage-out finished correctly
[2026-01-15 09:20:15] 2026-01-15 08:19:31,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 09:20:15] 2026-01-15 08:19:32,150 | INFO     | time since job start (3687s) is within the limit (349056.0s)
[2026-01-15 09:20:15] 2026-01-15 08:19:32,703 | INFO     | job 6969709091 has state=finished
[2026-01-15 09:20:15] 2026-01-15 08:19:32,704 | INFO     | preparing for final server update for job 6969709091 in state='finished'
[2026-01-15 09:20:15] 2026-01-15 08:19:32,705 | INFO     | this job has now completed (state=finished)
[2026-01-15 09:20:15] 2026-01-15 08:19:32,705 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 09:20:15] 2026-01-15 08:19:32,705 | INFO     | log transfer has been attempted: DONE
[2026-01-15 09:20:15] 2026-01-15 08:19:32,705 | INFO     | job 6969709091 has finished - writing final server update
[2026-01-15 09:20:15] 2026-01-15 08:19:32,706 | INFO     | total number of processed events: 400 (read)
[2026-01-15 09:20:15] 2026-01-15 08:19:32,707 | INFO     | executing command: lscpu
[2026-01-15 09:20:15] 2026-01-15 08:19:32,724 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 09:20:15] 2026-01-15 08:19:34,157 | INFO     | time since job start (3689s) is within the limit (349056.0s)
[2026-01-15 09:20:15] 2026-01-15 08:19:36,163 | INFO     | time since job start (3691s) is within the limit (349056.0s)
[2026-01-15 09:20:15] 2026-01-15 08:19:37,270 | INFO     | PID=2548810 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 09:20:15] 2026-01-15 08:19:37,396 | WARNING  | process 2555264 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 09:20:15] 2026-01-15 08:19:37,396 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6969709091/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 09:20:15] 2026-01-15 08:19:37,452 | INFO     | number of running child processes to parent process 2555264: 1
[2026-01-15 09:20:15] 2026-01-15 08:19:37,452 | INFO     | maximum number of monitored processes: 6
[2026-01-15 09:20:15] 2026-01-15 08:19:37,975 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 09:20:15] 2026-01-15 08:19:37,976 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4300.285583333333
[2026-01-15 09:20:15] 2026-01-15 08:19:37,977 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6969709091/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 09:20:15] 2026-01-15 08:19:37,977 | INFO     | extracted standard info from prmon json
[2026-01-15 09:20:15] 2026-01-15 08:19:37,977 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 09:20:15] 2026-01-15 08:19:37,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 09:20:15] 2026-01-15 08:19:37,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 09:20:15] 2026-01-15 08:19:37,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | fitting pss+swap vs Time
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | sum of square deviations: 46147842.0
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | sum of deviations: -2297698407.0
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | mean x: 1768463402.0
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | mean y: 2613075.2641509436
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | intersect: 88054304454.74838
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | chi2: 0.028205627076181582
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | current memory leak: -49.79 B/s (using 53 data points, chi2=0.03)
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | could have reported an average CPU frequency of 4319 MHz (6 samples)
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | ..............................
[2026-01-15 09:20:15] 2026-01-15 08:19:37,978 | INFO     | . Timing measurements:
[2026-01-15 09:20:15] 2026-01-15 08:19:37,979 | INFO     | . get job = 0 s
[2026-01-15 09:20:15] 2026-01-15 08:19:37,979 | INFO     | . initial setup = 1 s
[2026-01-15 09:20:15] 2026-01-15 08:19:37,979 | INFO     | . payload setup = 5 s
[2026-01-15 09:20:15] 2026-01-15 08:19:37,979 | INFO     | . stage-in = 0 s
[2026-01-15 09:20:15] 2026-01-15 08:19:37,979 | INFO     | . payload execution = 3659 s
[2026-01-15 09:20:15] 2026-01-15 08:19:37,979 | INFO     | . stage-out = 0 s
[2026-01-15 09:20:15] 2026-01-15 08:19:37,979 | INFO     | . log creation = 0 s
[2026-01-15 09:20:15] 2026-01-15 08:19:37,979 | INFO     | ..............................
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | 
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | job summary report
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | --------------------------------------------------
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | PanDA job id: 6969709091
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | task id: 48215263
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | errors: (none)
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | pilot state: finished 
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | transexitcode: 0
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | exeerrorcode: 0
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | exeerrordiag: 
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | exitcode: 0
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | exitmsg: OK
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | cpuconsumptiontime: 10386 s
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | nevents: 400
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | neventsw: 0
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | pid: 2555264
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | pgrp: 2555264
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | corecount: 3
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | event service: False
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | sizes: {0: 2283728, 1: 2283983, 5: 2284245, 11: 2284301, 3668: 2310119, 3669: 2319306, 3676: 2319444}
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | --------------------------------------------------
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | 
[2026-01-15 09:20:15] 2026-01-15 08:19:38,010 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,022 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 09:20:15] 2026-01-15 08:19:38,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,023 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 09:20:15] 2026-01-15 08:19:38,023 | INFO     | job 6969709091 has completed (purged errors)
[2026-01-15 09:20:15] 2026-01-15 08:19:38,023 | INFO     | overall cleanup function is called
[2026-01-15 09:20:15] 2026-01-15 08:19:39,029 | INFO     | --- collectZombieJob: --- 10, [2555264]
[2026-01-15 09:20:15] 2026-01-15 08:19:39,029 | INFO     | zombie collector waiting for pid 2555264
[2026-01-15 09:20:15] 2026-01-15 08:19:39,030 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 09:20:15] 2026-01-15 08:19:39,030 | INFO     | collected zombie processes
[2026-01-15 09:20:15] 2026-01-15 08:19:39,030 | INFO     | will attempt to kill all subprocesses of pid=2555264
[2026-01-15 09:20:15] 2026-01-15 08:19:39,068 | INFO     | process IDs to be killed: [2555264] (in reverse order)
[2026-01-15 09:20:15] 2026-01-15 08:19:39,093 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 09:20:15] 2026-01-15 08:19:39,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 09:20:15] 2026-01-15 08:19:39,094 | INFO     | did not find any defunct processes belonging to 2555264
[2026-01-15 09:20:15] 2026-01-15 08:19:39,095 | INFO     | did not find any defunct processes belonging to 2555264
[2026-01-15 09:20:15] 2026-01-15 08:19:39,095 | INFO     | ready for new job
[2026-01-15 09:20:15] 2026-01-15 08:19:39,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 09:20:15] 2026-01-15 08:19:39,096 | INFO     | ***************************************
[2026-01-15 09:20:15] 2026-01-15 08:19:39,096 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 09:20:15] 2026-01-15 08:19:39,096 | INFO     | ***************************************
[2026-01-15 09:20:15] 2026-01-15 08:19:39,096 | INFO     | 
[2026-01-15 09:20:15] 2026-01-15 08:19:39,096 | INFO     | architecture information:
[2026-01-15 09:20:15] 2026-01-15 08:19:39,097 | INFO     | executing command: cat /etc/os-release
[2026-01-15 09:20:15] 2026-01-15 08:19:39,106 | INFO     | cat /etc/os-release:
[2026-01-15 09:20:15] NAME="CentOS Linux"
[2026-01-15 09:20:15] VERSION="7 (Core)"
[2026-01-15 09:20:15] ID="centos"
[2026-01-15 09:20:15] ID_LIKE="rhel fedora"
[2026-01-15 09:20:15] VERSION_ID="7"
[2026-01-15 09:20:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 09:20:15] ANSI_COLOR="0;31"
[2026-01-15 09:20:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 09:20:15] HOME_URL="https://www.centos.org/"
[2026-01-15 09:20:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 09:20:15] 
[2026-01-15 09:20:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 09:20:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 09:20:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 09:20:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 09:20:15] 
[2026-01-15 09:20:15] 2026-01-15 08:19:39,106 | INFO     | ***************************************
[2026-01-15 09:20:15] 2026-01-15 08:19:39,609 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 09:20:15] 2026-01-15 08:19:39,623 | INFO     | sufficient remaining disk space (336843505664 B)
[2026-01-15 09:20:15] 2026-01-15 08:19:39,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 09:20:15] 2026-01-15 08:19:39,623 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 09:20:15] 2026-01-15 08:19:39,623 | INFO     | update_server=False
[2026-01-15 09:20:15] 2026-01-15 08:19:39,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 09:20:15] 2026-01-15 08:19:39,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 09:20:15] 2026-01-15 08:19:39,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 09:20:15] 2026-01-15 08:19:39,955 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 09:20:15] 2026-01-15 08:19:39,955 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 09:20:15] 2026-01-15 08:19:39,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 09:20:15] 2026-01-15 08:19:39,956 | INFO     | will abort loop
[2026-01-15 09:20:15] 2026-01-15 08:19:39,985 | INFO     | all payload control threads have been joined
[2026-01-15 09:20:15] 2026-01-15 08:19:40,428 | INFO     | all job control threads have been joined
[2026-01-15 09:20:15] 2026-01-15 08:19:40,488 | INFO     | all data control threads have been joined
[2026-01-15 09:20:15] 2026-01-15 08:19:40,628 | INFO     | [job] queue monitor thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:40,629 | INFO     | [job] retrieve thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:40,732 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:40,962 | INFO     | [job] job monitor thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:40,991 | INFO     | [payload] control thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:41,379 | INFO     | [payload] failed_post thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:41,434 | INFO     | [job] control thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:41,494 | INFO     | [data] control thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:41,499 | INFO     | [job] validate thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:41,598 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:41,620 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:41,629 | INFO     | [data] copytool_out thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:41,915 | INFO     | [payload] validate_post thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:41,939 | INFO     | [data] copytool_in thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:42,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 09:20:15] 2026-01-15 08:19:46,131 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:19:50,325 | INFO     | job.realtimelogging is not enabled
[2026-01-15 09:20:15] 2026-01-15 08:19:51,331 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 09:20:15] 2026-01-15 08:20:09,378 | INFO     | PID=2548810 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 09:20:15] 2026-01-15 08:20:09,378 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 09:20:15] 2026-01-15 08:20:09,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 09:20:15] 2026-01-15 08:20:09,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 09:20:15] 2026-01-15 08:20:10,241 | INFO     | [monitor] cgroup control has ended
[2026-01-15 09:20:15] 2026-01-15 08:20:10,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932489160512)>', '<ExcThread(monitor, started 139931737368320)>']
[2026-01-15 09:20:15] 2026-01-15 08:20:11,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 09:20:15] 2026-01-15 08:20:11,389 | INFO     | [monitor] control thread has ended
[2026-01-15 09:20:15] 2026-01-15 08:20:15,654 | INFO     | all workflow threads have been joined
[2026-01-15 09:20:15] 2026-01-15 08:20:15,654 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 09:20:15] 2026-01-15 08:20:15,655 | INFO     | traces error code: 0
[2026-01-15 09:20:15] 2026-01-15 08:20:15,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 09:20:15] 2026-01-15 08:20:15,701 [wrapper] ==== pilot stdout END ====
[2026-01-15 09:20:15] 2026-01-15 08:20:15,703 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 09:20:15] 2026-01-15 08:20:15,706 [wrapper] pilotpid: 2548810
[2026-01-15 09:20:15] 2026-01-15 08:20:15,709 [wrapper] Pilot exit status: 0
[2026-01-15 09:20:15] 2026-01-15 08:20:15,717 [wrapper] pandaids: 6969709091
[2026-01-15 09:20:15] 2026-01-15 08:20:15,732 [wrapper] cleanup supervisor_pilot 2564657 2548811
[2026-01-15 09:20:15] 2026-01-15 08:20:15,735 [wrapper] Test setup, not cleaning
[2026-01-15 09:20:15] 2026-01-15 08:20:15,737 [wrapper] apfmon messages muted
[2026-01-15 09:20:15] 2026-01-15 08:20:15,740 [wrapper] ==== wrapper stdout END ====
[2026-01-15 09:20:15] 2026-01-15 08:20:15,742 [wrapper] ==== wrapper stderr END ====
[2026-01-15 09:20:15]  *** Error codes and diagnostics ***
[2026-01-15 09:20:15]     "exeErrorCode": 0,
[2026-01-15 09:20:15]     "exeErrorDiag": "",
[2026-01-15 09:20:15]     "pilotErrorCode": 0,
[2026-01-15 09:20:15]     "pilotErrorDiag": "",
[2026-01-15 09:20:15]  *** Listing of results directory ***
[2026-01-15 09:20:15] total 738312
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc    579449 Jan 14 22:43 pilot3.tar.gz
[2026-01-15 09:20:15] -rwx------ 1 boinc boinc     36322 Jan 14 22:46 runpilot2-wrapper.sh
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc      5112 Jan 14 22:50 queuedata.json
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc       100 Jan 15 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 09:20:15] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 08:17 run_atlas
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc       105 Jan 15 08:17 job.xml
[2026-01-15 09:20:15] -rw-r--r-- 2 boinc boinc 595399591 Jan 15 08:17 EVNT.32794306._001410.pool.root.1
[2026-01-15 09:20:15] -rw-r--r-- 2 boinc boinc    592406 Jan 15 08:17 input.tar.gz
[2026-01-15 09:20:15] -rw-r--r-- 2 boinc boinc     15847 Jan 15 08:17 start_atlas.sh
[2026-01-15 09:20:15] drwxrwx--x 2 boinc boinc      4096 Jan 15 08:17 shared
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc         0 Jan 15 08:17 boinc_setup_complete
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc      6274 Jan 15 08:17 init_data.xml
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc         0 Jan 15 08:17 boinc_lockfile
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc      2509 Jan 15 08:17 pandaJob.out
[2026-01-15 09:20:15] -rw------- 1 boinc boinc    999480 Jan 15 08:18 agis_schedconf.cvmfs.json
[2026-01-15 09:20:15] -rw------- 1 boinc boinc   1516246 Jan 15 08:18 agis_ddmendpoints.agis.ALL.json
[2026-01-15 09:20:15] drwx------ 5 boinc boinc      4096 Jan 15 08:18 pilot3
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc       530 Jan 15 09:19 boinc_task_state.xml
[2026-01-15 09:20:15] -rw------- 1 boinc boinc 155112050 Jan 15 09:19 HITS.48215263._035297.pool.root.1
[2026-01-15 09:20:15] -rw------- 1 boinc boinc        95 Jan 15 09:19 pilot_heartbeat.json
[2026-01-15 09:20:15] -rw------- 1 boinc boinc      1018 Jan 15 09:19 memory_monitor_summary.json
[2026-01-15 09:20:15] -rw------- 1 boinc boinc    239741 Jan 15 09:19 log.48215263._035297.job.log.tgz.1
[2026-01-15 09:20:15] -rw------- 1 boinc boinc      7759 Jan 15 09:19 heartbeat.json
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc      8192 Jan 15 09:20 boinc_mmap_file
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc        27 Jan 15 09:20 wrapper_checkpoint.txt
[2026-01-15 09:20:15] -rw------- 1 boinc boinc      5010 Jan 15 09:20 pilotlog.txt
[2026-01-15 09:20:15] -rw------- 1 boinc boinc    556837 Jan 15 09:20 log.48215263._035297.job.log.1
[2026-01-15 09:20:15] -rw------- 1 boinc boinc       357 Jan 15 09:20 output.list
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc       620 Jan 15 09:20 runtime_log
[2026-01-15 09:20:15] -rw------- 1 boinc boinc    819200 Jan 15 09:20 result.tar.gz
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc      8907 Jan 15 09:20 runtime_log.err
[2026-01-15 09:20:15] -rw------- 1 boinc boinc       660 Jan 15 09:20 462MDmZsN08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7omKDmDozLTo.diag
[2026-01-15 09:20:15] -rw-r--r-- 1 boinc boinc     21916 Jan 15 09:20 stderr.txt
[2026-01-15 09:20:15] HITS file was successfully produced:
[2026-01-15 09:20:15] -rw------- 1 boinc boinc 155112050 Jan 15 09:19 shared/HITS.pool.root.1
[2026-01-15 09:20:15]  *** Contents of shared directory: ***
[2026-01-15 09:20:15] total 734328
[2026-01-15 09:20:15] -rw-r--r-- 2 boinc boinc 595399591 Jan 15 08:17 ATLAS.root_0
[2026-01-15 09:20:15] -rw-r--r-- 2 boinc boinc    592406 Jan 15 08:17 input.tar.gz
[2026-01-15 09:20:15] -rw-r--r-- 2 boinc boinc     15847 Jan 15 08:17 start_atlas.sh
[2026-01-15 09:20:15] -rw------- 1 boinc boinc 155112050 Jan 15 09:19 HITS.pool.root.1
[2026-01-15 09:20:15] -rw------- 1 boinc boinc    819200 Jan 15 09:20 result.tar.gz
09:20:17 (2545083): run_atlas exited; CPU time 10403.175806
09:20:17 (2545083): called boinc_finish(0)

</stderr_txt>
]]>

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