Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:00:46 (30932): wrapper (7.7.26015): starting
23:00:46 (30932): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 23:00:46] Arguments: --nthreads 8
[2026-01-14 23:00:46] Threads: 8
[2026-01-14 23:00:46] Checking for CVMFS
[2026-01-14 23:00:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 23:00:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 23:00:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 23:00:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 23:00:46] 2.11.2.0 5524 189177 136820 155154 2 188 16893550 18432000 1833 130560 0 128073443 99.980 7328652 33846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 23:00:46] CVMFS is ok
[2026-01-14 23:00:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 23:00:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 23:00:46] Further information can be found at the LHC@home message board.
[2026-01-14 23:00:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 23:00:46] Checking for apptainer binary...
[2026-01-14 23:00:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 23:00:46] Running /usr/bin/apptainer --version
[2026-01-14 23:00:46] apptainer version 1.3.2-1.el7
[2026-01-14 23:00:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 23:00:47] c-206-5.aglt2.org
[2026-01-14 23:00:47] apptainer works
[2026-01-14 23:00:47] Set ATHENA_PROC_NUMBER=8
[2026-01-14 23:00:47] Set ATHENA_CORE_NUMBER=8
[2026-01-14 23:00:47] Starting ATLAS job with PandaID=6969710242
[2026-01-14 23:00:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:03 (30932): BOINC client no longer exists - exiting
00:20:03 (30932): timer handler: client dead, exiting
00:31:14 (4055): wrapper (7.7.26015): starting
00:31:14 (4055): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 00:31:14] Arguments: --nthreads 8
[2026-01-15 00:31:14] Threads: 8
[2026-01-15 00:31:14] This job has been restarted, cleaning up previous attempt
[2026-01-15 00:31:14] Checking for CVMFS
[2026-01-15 00:31:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 00:31:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 00:31:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 00:31:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 00:31:15] 2.11.2.0 5524 189267 134004 155157 0 9 16928779 18432000 1 130560 0 128229516 99.980 7332865 33847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 00:31:15] CVMFS is ok
[2026-01-15 00:31:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 00:31:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 00:31:15] Further information can be found at the LHC@home message board.
[2026-01-15 00:31:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 00:31:15] Checking for apptainer binary...
[2026-01-15 00:31:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 00:31:15] Running /usr/bin/apptainer --version
[2026-01-15 00:31:15] apptainer version 1.3.2-1.el7
[2026-01-15 00:31:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 00:31:16] c-206-5.aglt2.org
[2026-01-15 00:31:16] apptainer works
[2026-01-15 00:31:16] Set ATHENA_PROC_NUMBER=8
[2026-01-15 00:31:16] Set ATHENA_CORE_NUMBER=8
[2026-01-15 00:31:16] Starting ATLAS job with PandaID=6969710242
[2026-01-15 00:31:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 02:27:46]  *** The last 200 lines of the pilot log: ***
[2026-01-15 02:27:46] 2026-01-15 07:26:53,874 | INFO     | monitor loop #501: job 0:6969710242 is in state 'finished'
[2026-01-15 02:27:46] 2026-01-15 07:26:53,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,691 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 02:27:46] 2026-01-15 07:26:54,696 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2400.2916666666665
[2026-01-15 02:27:46] 2026-01-15 07:26:54,701 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969710242/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,702 | INFO     | extracted standard info from prmon json
[2026-01-15 02:27:46] 2026-01-15 07:26:54,702 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 02:27:46] 2026-01-15 07:26:54,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 02:27:46] 2026-01-15 07:26:54,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 02:27:46] 2026-01-15 07:26:54,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 02:27:46] 2026-01-15 07:26:54,706 | INFO     | fitting pss+swap vs Time
[2026-01-15 02:27:46] 2026-01-15 07:26:54,707 | INFO     | sum of square deviations: 447383272.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,708 | INFO     | sum of deviations: 13738508694.000002
[2026-01-15 02:27:46] 2026-01-15 07:26:54,708 | INFO     | mean x: 1768458533.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,708 | INFO     | mean y: 2499173.336283186
[2026-01-15 02:27:46] 2026-01-15 07:26:54,708 | INFO     | intersect: -54304365770.41823
[2026-01-15 02:27:46] 2026-01-15 07:26:54,709 | INFO     | chi2: 1.3801253340413553
[2026-01-15 02:27:46] 2026-01-15 07:26:54,709 | INFO     | sum of square deviations: 390582207.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,710 | INFO     | sum of deviations: 13211090067.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,710 | INFO     | mean x: 1768458380.5
[2026-01-15 02:27:46] 2026-01-15 07:26:54,710 | INFO     | mean y: 2497756.777777778
[2026-01-15 02:27:46] 2026-01-15 07:26:54,710 | INFO     | intersect: -59814008284.23206
[2026-01-15 02:27:46] 2026-01-15 07:26:54,710 | INFO     | chi2: 1.3819486134377945
[2026-01-15 02:27:46] 2026-01-15 07:26:54,710 | INFO     | current chi2=1.3819486134377945 (change=-0.13210969695775407 %)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,711 | INFO     | right removable region: 107
[2026-01-15 02:27:46] 2026-01-15 07:26:54,711 | INFO     | sum of square deviations: 390582207.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,711 | INFO     | sum of deviations: -3083264977.5
[2026-01-15 02:27:46] 2026-01-15 07:26:54,711 | INFO     | mean x: 1768458685.5
[2026-01-15 02:27:46] 2026-01-15 07:26:54,711 | INFO     | mean y: 2543519.657407407
[2026-01-15 02:27:46] 2026-01-15 07:26:54,711 | INFO     | intersect: 13962797293.219185
[2026-01-15 02:27:46] 2026-01-15 07:26:54,712 | INFO     | chi2: 0.029764025163206906
[2026-01-15 02:27:46] 2026-01-15 07:26:54,712 | INFO     | current chi2=0.029764025163206906 (change=97.84338245019745 %)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,712 | INFO     | sum of square deviations: 338804492.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,712 | INFO     | sum of deviations: -4247915133.000001
[2026-01-15 02:27:46] 2026-01-15 07:26:54,713 | INFO     | mean x: 1768458838.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,713 | INFO     | mean y: 2546829.2524271845
[2026-01-15 02:27:46] 2026-01-15 07:26:54,713 | INFO     | intersect: 22175402376.95218
[2026-01-15 02:27:46] 2026-01-15 07:26:54,713 | INFO     | chi2: 0.009774736324383738
[2026-01-15 02:27:46] 2026-01-15 07:26:54,713 | INFO     | current chi2=0.009774736324383738 (change=67.15922570692194 %)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,713 | INFO     | sum of square deviations: 291817564.5
[2026-01-15 02:27:46] 2026-01-15 07:26:54,714 | INFO     | sum of deviations: -3934173893.9999995
[2026-01-15 02:27:46] 2026-01-15 07:26:54,714 | INFO     | mean x: 1768458990.5
[2026-01-15 02:27:46] 2026-01-15 07:26:54,714 | INFO     | mean y: 2545796.5306122447
[2026-01-15 02:27:46] 2026-01-15 07:26:54,714 | INFO     | intersect: 23844240195.411434
[2026-01-15 02:27:46] 2026-01-15 07:26:54,714 | INFO     | chi2: 0.009409801566428965
[2026-01-15 02:27:46] 2026-01-15 07:26:54,714 | INFO     | current chi2=0.009409801566428965 (change=3.7334486153290736 %)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,714 | INFO     | left removable region: 30
[2026-01-15 02:27:46] 2026-01-15 07:26:54,715 | INFO     | sum of square deviations: 141539398.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,715 | INFO     | sum of deviations: -1726989117.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,715 | INFO     | mean x: 1768459265.0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,715 | INFO     | mean y: 2537946.25974026
[2026-01-15 02:27:46] 2026-01-15 07:26:54,715 | INFO     | intersect: 21580345593.236015
[2026-01-15 02:27:46] 2026-01-15 07:26:54,715 | INFO     | chi2: 0.008307618100594128
[2026-01-15 02:27:46] 2026-01-15 07:26:54,716 | INFO     | current memory leak: -12.20 B/s (using 77 data points, chi2=0.01)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,716 | INFO     | could have reported an average CPU frequency of 2261 MHz (7 samples)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,716 | INFO     | ..............................
[2026-01-15 02:27:46] 2026-01-15 07:26:54,716 | INFO     | . Timing measurements:
[2026-01-15 02:27:46] 2026-01-15 07:26:54,716 | INFO     | . get job = 0 s
[2026-01-15 02:27:46] 2026-01-15 07:26:54,717 | INFO     | . initial setup = 1 s
[2026-01-15 02:27:46] 2026-01-15 07:26:54,717 | INFO     | . payload setup = 6 s
[2026-01-15 02:27:46] 2026-01-15 07:26:54,717 | INFO     | . stage-in = 0 s
[2026-01-15 02:27:46] 2026-01-15 07:26:54,717 | INFO     | . payload execution = 6890 s
[2026-01-15 02:27:46] 2026-01-15 07:26:54,717 | INFO     | . stage-out = 2 s
[2026-01-15 02:27:46] 2026-01-15 07:26:54,717 | INFO     | . log creation = 0 s
[2026-01-15 02:27:46] 2026-01-15 07:26:54,717 | INFO     | ..............................
[2026-01-15 02:27:46] 2026-01-15 07:26:54,807 | INFO     | 
[2026-01-15 02:27:46] 2026-01-15 07:26:54,807 | INFO     | job summary report
[2026-01-15 02:27:46] 2026-01-15 07:26:54,807 | INFO     | --------------------------------------------------
[2026-01-15 02:27:46] 2026-01-15 07:26:54,807 | INFO     | PanDA job id: 6969710242
[2026-01-15 02:27:46] 2026-01-15 07:26:54,807 | INFO     | task id: 48215263
[2026-01-15 02:27:46] 2026-01-15 07:26:54,807 | INFO     | errors: (none)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,807 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 02:27:46] 2026-01-15 07:26:54,807 | INFO     | pilot state: finished 
[2026-01-15 02:27:46] 2026-01-15 07:26:54,807 | INFO     | transexitcode: 0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | exeerrorcode: 0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | exeerrordiag: 
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | exitcode: 0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | exitmsg: OK
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | cpuconsumptiontime: 51335 s
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | nevents: 400
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | neventsw: 0
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | pid: 2275
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | pgrp: 2275
[2026-01-15 02:27:46] 2026-01-15 07:26:54,808 | INFO     | corecount: 8
[2026-01-15 02:27:46] 2026-01-15 07:26:54,809 | INFO     | event service: False
[2026-01-15 02:27:46] 2026-01-15 07:26:54,809 | INFO     | sizes: {0: 2283781, 1: 2283980, 5: 2284242, 11: 2284298, 6900: 2311403, 6902: 2320401, 6903: 2320585, 6909: 2320779}
[2026-01-15 02:27:46] 2026-01-15 07:26:54,809 | INFO     | --------------------------------------------------
[2026-01-15 02:27:46] 2026-01-15 07:26:54,809 | INFO     | 
[2026-01-15 02:27:46] 2026-01-15 07:26:54,809 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 02:27:46] 2026-01-15 07:26:54,821 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 02:27:46] 2026-01-15 07:26:54,823 | INFO     | job 6969710242 has completed (purged errors)
[2026-01-15 02:27:46] 2026-01-15 07:26:54,824 | INFO     | overall cleanup function is called
[2026-01-15 02:27:46] 2026-01-15 07:26:55,831 | INFO     | --- collectZombieJob: --- 10, [2275]
[2026-01-15 02:27:46] 2026-01-15 07:26:55,831 | INFO     | zombie collector waiting for pid 2275
[2026-01-15 02:27:46] 2026-01-15 07:26:55,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 02:27:46] 2026-01-15 07:26:55,831 | INFO     | collected zombie processes
[2026-01-15 02:27:46] 2026-01-15 07:26:55,831 | INFO     | will attempt to kill all subprocesses of pid=2275
[2026-01-15 02:27:46] 2026-01-15 07:26:55,991 | INFO     | process IDs to be killed: [2275] (in reverse order)
[2026-01-15 02:27:46] 2026-01-15 07:26:56,037 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 02:27:46] 2026-01-15 07:26:56,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 02:27:46] 2026-01-15 07:26:56,042 | INFO     | did not find any defunct processes belonging to 2275
[2026-01-15 02:27:46] 2026-01-15 07:26:56,046 | INFO     | did not find any defunct processes belonging to 2275
[2026-01-15 02:27:46] 2026-01-15 07:26:56,046 | INFO     | ready for new job
[2026-01-15 02:27:46] 2026-01-15 07:26:56,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 02:27:46] 2026-01-15 07:26:56,048 | INFO     | ***************************************
[2026-01-15 02:27:46] 2026-01-15 07:26:56,048 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 02:27:46] 2026-01-15 07:26:56,048 | INFO     | ***************************************
[2026-01-15 02:27:46] 2026-01-15 07:26:56,048 | INFO     | 
[2026-01-15 02:27:46] 2026-01-15 07:26:56,050 | INFO     | architecture information:
[2026-01-15 02:27:46] 2026-01-15 07:26:56,050 | INFO     | executing command: cat /etc/os-release
[2026-01-15 02:27:46] 2026-01-15 07:26:56,064 | INFO     | cat /etc/os-release:
[2026-01-15 02:27:46] NAME="CentOS Linux"
[2026-01-15 02:27:46] VERSION="7 (Core)"
[2026-01-15 02:27:46] ID="centos"
[2026-01-15 02:27:46] ID_LIKE="rhel fedora"
[2026-01-15 02:27:46] VERSION_ID="7"
[2026-01-15 02:27:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 02:27:46] ANSI_COLOR="0;31"
[2026-01-15 02:27:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 02:27:46] HOME_URL="https://www.centos.org/"
[2026-01-15 02:27:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 02:27:46] 
[2026-01-15 02:27:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 02:27:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 02:27:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 02:27:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 02:27:46] 
[2026-01-15 02:27:46] 2026-01-15 07:26:56,064 | INFO     | ***************************************
[2026-01-15 02:27:46] 2026-01-15 07:26:56,567 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 02:27:46] 2026-01-15 07:26:56,582 | INFO     | sufficient remaining disk space (25759318016 B)
[2026-01-15 02:27:46] 2026-01-15 07:26:56,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 02:27:46] 2026-01-15 07:26:56,582 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 02:27:46] 2026-01-15 07:26:56,583 | INFO     | update_server=False
[2026-01-15 02:27:46] 2026-01-15 07:26:56,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 02:27:46] 2026-01-15 07:26:56,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 02:27:46] 2026-01-15 07:26:56,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 02:27:46] 2026-01-15 07:26:56,859 | INFO     | all job control threads have been joined
[2026-01-15 02:27:46] 2026-01-15 07:26:56,913 | INFO     | all data control threads have been joined
[2026-01-15 02:27:46] 2026-01-15 07:26:57,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 02:27:46] 2026-01-15 07:26:57,382 | INFO     | aborting loop
[2026-01-15 02:27:46] 2026-01-15 07:26:57,588 | INFO     | [job] retrieve thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:57,589 | INFO     | [job] queue monitor thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:57,668 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:57,737 | INFO     | all payload control threads have been joined
[2026-01-15 02:27:46] 2026-01-15 07:26:57,766 | INFO     | [payload] validate_post thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:57,809 | INFO     | [payload] failed_post thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:57,861 | INFO     | [job] control thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:57,918 | INFO     | [data] control thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:58,045 | INFO     | [job] validate thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:58,388 | INFO     | [job] job monitor thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:58,412 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:58,483 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:58,589 | INFO     | [data] copytool_out thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:58,726 | INFO     | [data] copytool_in thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:58,742 | INFO     | [payload] control thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:58,786 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:26:59,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 02:27:46] 2026-01-15 07:27:03,841 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 02:27:46] 2026-01-15 07:27:26,482 | INFO     | PID=15545 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 02:27:46] 2026-01-15 07:27:26,482 | INFO     | .. there are 3 such processes running
[2026-01-15 02:27:46] 2026-01-15 07:27:26,482 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 02:27:46] 2026-01-15 07:27:26,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 02:27:46] 2026-01-15 07:27:26,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 02:27:46] 2026-01-15 07:27:40,720 | INFO     | [monitor] cgroup control has ended
[2026-01-15 02:27:46] 2026-01-15 07:27:41,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957445834560)>', '<ExcThread(monitor, started 139956710258432)>']
[2026-01-15 02:27:46] 2026-01-15 07:27:41,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 02:27:46] 2026-01-15 07:27:41,542 | INFO     | [monitor] control thread has ended
[2026-01-15 02:27:46] 2026-01-15 07:27:46,154 | INFO     | all workflow threads have been joined
[2026-01-15 02:27:46] 2026-01-15 07:27:46,154 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 02:27:46] 2026-01-15 07:27:46,154 | INFO     | traces error code: 0
[2026-01-15 02:27:46] 2026-01-15 07:27:46,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 02:27:46] 2026-01-15 07:27:46,260 [wrapper] ==== pilot stdout END ====
[2026-01-15 02:27:46] 2026-01-15 07:27:46,262 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 02:27:46] 2026-01-15 07:27:46,265 [wrapper] pilotpid: 15545
[2026-01-15 02:27:46] 2026-01-15 07:27:46,267 [wrapper] Pilot exit status: 0
[2026-01-15 02:27:46] 2026-01-15 07:27:46,278 [wrapper] pandaids: 6969710242 6969710242
[2026-01-15 02:27:46] 2026-01-15 07:27:46,311 [wrapper] cleanup supervisor_pilot  5561 15547
[2026-01-15 02:27:46] 2026-01-15 07:27:46,314 [wrapper] Test setup, not cleaning
[2026-01-15 02:27:46] 2026-01-15 07:27:46,316 [wrapper] apfmon messages muted
[2026-01-15 02:27:46] 2026-01-15 07:27:46,319 [wrapper] ==== wrapper stdout END ====
[2026-01-15 02:27:46] 2026-01-15 07:27:46,322 [wrapper] ==== wrapper stderr END ====
[2026-01-15 02:27:46]  *** Error codes and diagnostics ***
[2026-01-15 02:27:46]     "exeErrorCode": 0,
[2026-01-15 02:27:46]     "exeErrorDiag": "",
[2026-01-15 02:27:46]     "pilotErrorCode": 0,
[2026-01-15 02:27:46]     "pilotErrorDiag": "",
[2026-01-15 02:27:46]  *** Listing of results directory ***
[2026-01-15 02:27:46] total 1309588
[2026-01-15 02:27:46] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 16:43 pilot3.tar.gz
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 16:43 queuedata.json
[2026-01-15 02:27:46] -rwx------ 1 boincer umatlas     36322 Jan 14 16:43 runpilot2-wrapper.sh
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas       100 Jan 14 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 02:27:46] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 23:00 run_atlas
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas       105 Jan 14 23:00 job.xml
[2026-01-15 02:27:46] -rw-r--r-- 3 boincer umatlas 594442520 Jan 14 23:00 EVNT.32794306._001424.pool.root.1
[2026-01-15 02:27:46] -rw-r--r-- 3 boincer umatlas 594442520 Jan 14 23:00 ATLAS.root_0
[2026-01-15 02:27:46] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 23:00 start_atlas.sh
[2026-01-15 02:27:46] drwxrwx--x 2 boincer umatlas      4096 Jan 14 23:00 shared
[2026-01-15 02:27:46] -rw-r--r-- 2 boincer umatlas    592397 Jan 14 23:00 input.tar.gz
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas         0 Jan 14 23:00 boinc_lockfile
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 00:31 pandaJob.out
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas        57 Jan 15 00:31 setup.sh.local
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas    999472 Jan 15 00:31 agis_schedconf.cvmfs.json
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas      5950 Jan 15 02:22 init_data.xml
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas 145531339 Jan 15 02:26 HITS.48215263._035633.pool.root.1
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas       532 Jan 15 02:26 boinc_task_state.xml
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas      1044 Jan 15 02:26 memory_monitor_summary.json
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas   1516246 Jan 15 02:26 agis_ddmendpoints.agis.ALL.json
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas    347054 Jan 15 02:26 log.48215263._035633.job.log.tgz.1
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas      7843 Jan 15 02:26 heartbeat.json
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas        96 Jan 15 02:27 pilot_heartbeat.json
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 02:27 boinc_mmap_file
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas        28 Jan 15 02:27 wrapper_checkpoint.txt
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas      4821 Jan 15 02:27 pilotlog.txt
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas    983956 Jan 15 02:27 log.48215263._035633.job.log.1
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas       357 Jan 15 02:27 output.list
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas       620 Jan 15 02:27 runtime_log
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas   1351680 Jan 15 02:27 result.tar.gz
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas      9422 Jan 15 02:27 runtime_log.err
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas       782 Jan 15 02:27 BbxMDmepN08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdmsKDmbMbgCo.diag
[2026-01-15 02:27:46] -rw-r--r-- 1 boincer umatlas     23345 Jan 15 02:27 stderr.txt
[2026-01-15 02:27:46] HITS file was successfully produced:
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas 145531339 Jan 15 02:26 shared/HITS.pool.root.1
[2026-01-15 02:27:46]  *** Contents of shared directory: ***
[2026-01-15 02:27:46] total 724560
[2026-01-15 02:27:46] -rw-r--r-- 3 boincer umatlas 594442520 Jan 14 23:00 ATLAS.root_0
[2026-01-15 02:27:46] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 23:00 start_atlas.sh
[2026-01-15 02:27:46] -rw-r--r-- 2 boincer umatlas    592397 Jan 14 23:00 input.tar.gz
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas 145531339 Jan 15 02:26 HITS.pool.root.1
[2026-01-15 02:27:46] -rw------- 1 boincer umatlas   1351680 Jan 15 02:27 result.tar.gz
02:27:48 (4055): run_atlas exited; CPU time 51397.890264
02:27:48 (4055): called boinc_finish(0)

</stderr_txt>
]]>

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