Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:21:52 (4189083): wrapper (7.7.26015): starting
11:21:52 (4189083): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 11:21:52] Arguments: --nthreads 12
[2026-01-16 11:21:52] Threads: 12
[2026-01-16 11:21:52] Checking for CVMFS
[2026-01-16 11:21:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 11:22:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 11:22:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 11:22:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 11:22:11] 2.13.3.0 40677 10410 73616 155206 1 236 4016626 4096000 19564 130560 0 83762670 99.981 1152075 230 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 11:22:11] CVMFS is ok
[2026-01-16 11:22:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 11:22:11] Checking for apptainer binary...
[2026-01-16 11:22:11] apptainer is not installed, using version from CVMFS
[2026-01-16 11:22:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 11:22:12] epyc7v12
[2026-01-16 11:22:12] apptainer works
[2026-01-16 11:22:13] Set ATHENA_PROC_NUMBER=12
[2026-01-16 11:22:13] Set ATHENA_CORE_NUMBER=12
[2026-01-16 11:22:13] Starting ATLAS job with PandaID=6969710841
[2026-01-16 11:22:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31426/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 12:57:02]  *** The last 200 lines of the pilot log: ***
[2026-01-16 12:57:02] 2026-01-16 12:55:48,491 | INFO     | stage-out finished correctly
[2026-01-16 12:57:02] 2026-01-16 12:55:48,834 | INFO     | monitor loop #366: job 0:6969710841 is in state 'finished'
[2026-01-16 12:57:02] 2026-01-16 12:55:48,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 12:57:02] 2026-01-16 12:55:49,631 | INFO     | time since job start (5583s) is within the limit (349056.0s)
[2026-01-16 12:57:02] 2026-01-16 12:55:49,896 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 12:57:02] 2026-01-16 12:55:51,151 | INFO     | job 6969710841 has state=finished
[2026-01-16 12:57:02] 2026-01-16 12:55:51,152 | INFO     | preparing for final server update for job 6969710841 in state='finished'
[2026-01-16 12:57:02] 2026-01-16 12:55:51,152 | INFO     | this job has now completed (state=finished)
[2026-01-16 12:57:02] 2026-01-16 12:55:51,152 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 12:57:02] 2026-01-16 12:55:51,152 | INFO     | log transfer has been attempted: DONE
[2026-01-16 12:57:02] 2026-01-16 12:55:51,152 | INFO     | job 6969710841 has finished - writing final server update
[2026-01-16 12:57:02] 2026-01-16 12:55:51,153 | INFO     | total number of processed events: 400 (read)
[2026-01-16 12:57:02] 2026-01-16 12:55:51,156 | INFO     | executing command: lscpu
[2026-01-16 12:57:02] 2026-01-16 12:55:51,324 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 12:57:02] 2026-01-16 12:55:51,346 | INFO     | monitor loop #367: job 0:6969710841 is in state 'finished'
[2026-01-16 12:57:02] 2026-01-16 12:55:51,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 12:57:02] 2026-01-16 12:55:52,274 | INFO     | PID=4193324 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 12:57:02] 2026-01-16 12:55:52,274 | INFO     | .. there are 22 such processes running
[2026-01-16 12:57:02] 2026-01-16 12:55:53,275 | INFO     | time since job start (5587s) is within the limit (349056.0s)
[2026-01-16 12:57:02] 2026-01-16 12:55:53,853 | INFO     | monitor loop #368: job 0:6969710841 is in state 'finished'
[2026-01-16 12:57:02] 2026-01-16 12:55:53,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 12:57:02] 2026-01-16 12:55:55,281 | INFO     | time since job start (5589s) is within the limit (349056.0s)
[2026-01-16 12:57:02] 2026-01-16 12:55:56,358 | INFO     | monitor loop #369: job 0:6969710841 is in state 'finished'
[2026-01-16 12:57:02] 2026-01-16 12:55:56,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 12:57:02] 2026-01-16 12:55:57,287 | INFO     | time since job start (5591s) is within the limit (349056.0s)
[2026-01-16 12:57:02] 2026-01-16 12:55:58,861 | INFO     | monitor loop #370: job 0:6969710841 is in state 'finished'
[2026-01-16 12:57:02] 2026-01-16 12:55:58,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 12:57:02] 2026-01-16 12:55:59,296 | INFO     | time since job start (5593s) is within the limit (349056.0s)
[2026-01-16 12:57:02] 2026-01-16 12:56:01,303 | INFO     | time since job start (5595s) is within the limit (349056.0s)
[2026-01-16 12:57:02] 2026-01-16 12:56:01,364 | INFO     | monitor loop #371: job 0:6969710841 is in state 'finished'
[2026-01-16 12:57:02] 2026-01-16 12:56:01,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 12:57:02] 2026-01-16 12:56:03,308 | INFO     | time since job start (5597s) is within the limit (349056.0s)
[2026-01-16 12:57:02] 2026-01-16 12:56:03,867 | INFO     | monitor loop #372: job 0:6969710841 is in state 'finished'
[2026-01-16 12:57:02] 2026-01-16 12:56:03,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 12:57:02] 2026-01-16 12:56:04,839 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 12:57:02] 2026-01-16 12:56:04,889 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2400.2053046875003
[2026-01-16 12:57:02] 2026-01-16 12:56:04,974 | INFO     | using path: /opt/boinc/instance_homes/boinc_31426/slots/0/PanDA_Pilot-6969710841/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 12:57:02] 2026-01-16 12:56:04,981 | INFO     | extracted standard info from prmon json
[2026-01-16 12:57:02] 2026-01-16 12:56:04,981 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 12:57:02] 2026-01-16 12:56:04,981 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 12:57:02] 2026-01-16 12:56:04,982 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 12:57:02] 2026-01-16 12:56:04,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 12:57:02] 2026-01-16 12:56:04,986 | INFO     | fitting pss+swap vs Time
[2026-01-16 12:57:02] 2026-01-16 12:56:04,986 | INFO     | sum of square deviations: 183761585.0
[2026-01-16 12:57:02] 2026-01-16 12:56:04,991 | INFO     | sum of deviations: 5115586056.499999
[2026-01-16 12:57:02] 2026-01-16 12:56:04,991 | INFO     | mean x: 1768565472.5
[2026-01-16 12:57:02] 2026-01-16 12:56:04,991 | INFO     | mean y: 2703981.1071428573
[2026-01-16 12:57:02] 2026-01-16 12:56:04,991 | INFO     | intersect: -49230920506.45011
[2026-01-16 12:57:02] 2026-01-16 12:56:04,992 | INFO     | chi2: 0.16391921380158506
[2026-01-16 12:57:02] 2026-01-16 12:56:04,992 | INFO     | current memory leak: 27.84 B/s (using 84 data points, chi2=0.16)
[2026-01-16 12:57:02] 2026-01-16 12:56:04,992 | INFO     | could have reported an average CPU frequency of 2399 MHz (7 samples)
[2026-01-16 12:57:02] 2026-01-16 12:56:04,992 | INFO     | ..............................
[2026-01-16 12:57:02] 2026-01-16 12:56:04,992 | INFO     | . Timing measurements:
[2026-01-16 12:57:02] 2026-01-16 12:56:04,993 | INFO     | . get job = 0 s
[2026-01-16 12:57:02] 2026-01-16 12:56:04,993 | INFO     | . initial setup = 2 s
[2026-01-16 12:57:02] 2026-01-16 12:56:04,993 | INFO     | . payload setup = 17 s
[2026-01-16 12:57:02] 2026-01-16 12:56:04,993 | INFO     | . stage-in = 0 s
[2026-01-16 12:57:02] 2026-01-16 12:56:04,993 | INFO     | . payload execution = 5520 s
[2026-01-16 12:57:02] 2026-01-16 12:56:04,993 | INFO     | . stage-out = 1 s
[2026-01-16 12:57:02] 2026-01-16 12:56:04,993 | INFO     | . log creation = 0 s
[2026-01-16 12:57:02] 2026-01-16 12:56:04,993 | INFO     | ..............................
[2026-01-16 12:57:02] 2026-01-16 12:56:05,254 | INFO     | 
[2026-01-16 12:57:02] 2026-01-16 12:56:05,254 | INFO     | job summary report
[2026-01-16 12:57:02] 2026-01-16 12:56:05,254 | INFO     | --------------------------------------------------
[2026-01-16 12:57:02] 2026-01-16 12:56:05,254 | INFO     | PanDA job id: 6969710841
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | task id: 48215263
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | errors: (none)
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | pilot state: finished 
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | transexitcode: 0
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | exeerrorcode: 0
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | exeerrordiag: 
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | exitcode: 0
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | exitmsg: OK
[2026-01-16 12:57:02] 2026-01-16 12:56:05,255 | INFO     | cpuconsumptiontime: 29790 s
[2026-01-16 12:57:02] 2026-01-16 12:56:05,256 | INFO     | nevents: 400
[2026-01-16 12:57:02] 2026-01-16 12:56:05,256 | INFO     | neventsw: 0
[2026-01-16 12:57:02] 2026-01-16 12:56:05,256 | INFO     | pid: 7317
[2026-01-16 12:57:02] 2026-01-16 12:56:05,258 | INFO     | pgrp: 7317
[2026-01-16 12:57:02] 2026-01-16 12:56:05,258 | INFO     | corecount: 12
[2026-01-16 12:57:02] 2026-01-16 12:56:05,258 | INFO     | event service: False
[2026-01-16 12:57:02] 2026-01-16 12:56:05,258 | INFO     | sizes: {0: 2283122, 1: 2283830, 2: 2284029, 13: 2284029, 15: 2284347, 24: 2284375, 5542: 2311170, 5545: 2320214, 5547: 2320270, 5562: 2320464}
[2026-01-16 12:57:02] 2026-01-16 12:56:05,259 | INFO     | --------------------------------------------------
[2026-01-16 12:57:02] 2026-01-16 12:56:05,259 | INFO     | 
[2026-01-16 12:57:02] 2026-01-16 12:56:05,259 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31426/slots/0
[2026-01-16 12:57:02] 2026-01-16 12:56:05,313 | INFO     | time since job start (5599s) is within the limit (349056.0s)
[2026-01-16 12:57:02] 2026-01-16 12:56:05,317 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,318 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,318 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,318 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 12:57:02] 2026-01-16 12:56:05,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,322 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 12:57:02] 2026-01-16 12:56:05,322 | INFO     | job 6969710841 has completed (purged errors)
[2026-01-16 12:57:02] 2026-01-16 12:56:05,323 | INFO     | overall cleanup function is called
[2026-01-16 12:57:02] 2026-01-16 12:56:06,340 | INFO     | --- collectZombieJob: --- 10, [7317]
[2026-01-16 12:57:02] 2026-01-16 12:56:06,340 | INFO     | zombie collector waiting for pid 7317
[2026-01-16 12:57:02] 2026-01-16 12:56:06,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 12:57:02] 2026-01-16 12:56:06,340 | INFO     | collected zombie processes
[2026-01-16 12:57:02] 2026-01-16 12:56:06,341 | INFO     | will attempt to kill all subprocesses of pid=7317
[2026-01-16 12:57:02] 2026-01-16 12:56:07,570 | INFO     | process IDs to be killed: [7317] (in reverse order)
[2026-01-16 12:57:02] 2026-01-16 12:56:08,109 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 12:57:02] 2026-01-16 12:56:08,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 12:57:02] 2026-01-16 12:56:08,133 | INFO     | did not find any defunct processes belonging to 7317
[2026-01-16 12:57:02] 2026-01-16 12:56:08,169 | INFO     | did not find any defunct processes belonging to 7317
[2026-01-16 12:57:02] 2026-01-16 12:56:08,169 | INFO     | ready for new job
[2026-01-16 12:57:02] 2026-01-16 12:56:08,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 12:57:02] 2026-01-16 12:56:08,175 | INFO     | ***************************************
[2026-01-16 12:57:02] 2026-01-16 12:56:08,175 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 12:57:02] 2026-01-16 12:56:08,175 | INFO     | ***************************************
[2026-01-16 12:57:02] 2026-01-16 12:56:08,175 | INFO     | 
[2026-01-16 12:57:02] 2026-01-16 12:56:08,192 | INFO     | architecture information:
[2026-01-16 12:57:02] 2026-01-16 12:56:08,201 | INFO     | executing command: cat /etc/os-release
[2026-01-16 12:57:02] 2026-01-16 12:56:08,237 | INFO     | cat /etc/os-release:
[2026-01-16 12:57:02] NAME="CentOS Linux"
[2026-01-16 12:57:02] VERSION="7 (Core)"
[2026-01-16 12:57:02] ID="centos"
[2026-01-16 12:57:02] ID_LIKE="rhel fedora"
[2026-01-16 12:57:02] VERSION_ID="7"
[2026-01-16 12:57:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 12:57:02] ANSI_COLOR="0;31"
[2026-01-16 12:57:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 12:57:02] HOME_URL="https://www.centos.org/"
[2026-01-16 12:57:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 12:57:02] 
[2026-01-16 12:57:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 12:57:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 12:57:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 12:57:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 12:57:02] 
[2026-01-16 12:57:02] 2026-01-16 12:56:08,238 | INFO     | ***************************************
[2026-01-16 12:57:02] 2026-01-16 12:56:08,742 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31426/slots/0
[2026-01-16 12:57:02] 2026-01-16 12:56:08,787 | INFO     | sufficient remaining disk space (282912096256 B)
[2026-01-16 12:57:02] 2026-01-16 12:56:08,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 12:57:02] 2026-01-16 12:56:08,787 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 12:57:02] 2026-01-16 12:56:08,788 | INFO     | update_server=False
[2026-01-16 12:57:02] 2026-01-16 12:56:08,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 12:57:02] 2026-01-16 12:56:08,799 | INFO     | all payload control threads have been joined
[2026-01-16 12:57:02] 2026-01-16 12:56:08,878 | INFO     | all job control threads have been joined
[2026-01-16 12:57:02] 2026-01-16 12:56:08,884 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-16 12:57:02] 2026-01-16 12:56:08,884 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-16 12:57:02] 2026-01-16 12:56:08,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 12:57:02] 2026-01-16 12:56:08,884 | INFO     | will abort loop
[2026-01-16 12:57:02] 2026-01-16 12:56:09,312 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 12:57:02] 2026-01-16 12:56:09,513 | INFO     | all data control threads have been joined
[2026-01-16 12:57:02] 2026-01-16 12:56:09,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 12:57:02] 2026-01-16 12:56:09,795 | INFO     | [job] retrieve thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:09,804 | INFO     | [payload] control thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:09,883 | INFO     | [job] control thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:09,889 | INFO     | [job] job monitor thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:10,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 12:57:02] 2026-01-16 12:56:10,310 | INFO     | [data] copytool_in thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:10,311 | INFO     | [job] validate thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:10,380 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:10,518 | INFO     | [data] control thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:10,770 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:10,973 | INFO     | [payload] validate_post thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:11,040 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:11,189 | INFO     | [payload] failed_post thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:11,273 | INFO     | [job] queue monitor thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:11,319 | INFO     | [data] copytool_out thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:13,722 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:19,231 | INFO     | job.realtimelogging is not enabled
[2026-01-16 12:57:02] 2026-01-16 12:56:20,236 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 12:57:02] 2026-01-16 12:56:39,699 | INFO     | PID=4193324 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 12:57:02] 2026-01-16 12:56:39,700 | INFO     | .. there are 22 such processes running
[2026-01-16 12:57:02] 2026-01-16 12:56:39,700 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 12:57:02] 2026-01-16 12:56:39,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 12:57:02] 2026-01-16 12:56:39,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 12:57:02] 2026-01-16 12:56:55,351 | INFO     | [monitor] cgroup control has ended
[2026-01-16 12:57:02] 2026-01-16 12:56:55,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138059872380736)>', '<ExcThread(monitor, started 138059039373056)>']
[2026-01-16 12:57:02] 2026-01-16 12:56:56,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 12:57:02] 2026-01-16 12:56:56,791 | INFO     | [monitor] control thread has ended
[2026-01-16 12:57:02] 2026-01-16 12:57:00,997 | INFO     | all workflow threads have been joined
[2026-01-16 12:57:02] 2026-01-16 12:57:00,997 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 12:57:02] 2026-01-16 12:57:00,998 | INFO     | traces error code: 0
[2026-01-16 12:57:02] 2026-01-16 12:57:00,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 12:57:02] 2026-01-16 12:57:01,501 [wrapper] ==== pilot stdout END ====
[2026-01-16 12:57:02] 2026-01-16 12:57:01,507 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 12:57:02] 2026-01-16 12:57:01,514 [wrapper] pilotpid: 4193324
[2026-01-16 12:57:02] 2026-01-16 12:57:01,521 [wrapper] Pilot exit status: 0
[2026-01-16 12:57:02] 2026-01-16 12:57:01,571 [wrapper] pandaids: 6969710841
[2026-01-16 12:57:02] 2026-01-16 12:57:01,769 [wrapper] cleanup supervisor_pilot  490006 4193325
[2026-01-16 12:57:02] 2026-01-16 12:57:01,781 [wrapper] Test setup, not cleaning
[2026-01-16 12:57:02] 2026-01-16 12:57:01,790 [wrapper] apfmon messages muted
[2026-01-16 12:57:02] 2026-01-16 12:57:01,803 [wrapper] ==== wrapper stdout END ====
[2026-01-16 12:57:02] 2026-01-16 12:57:01,813 [wrapper] ==== wrapper stderr END ====
[2026-01-16 12:57:02]  *** Error codes and diagnostics ***
[2026-01-16 12:57:02]     "exeErrorCode": 0,
[2026-01-16 12:57:02]     "exeErrorDiag": "",
[2026-01-16 12:57:02]     "pilotErrorCode": 0,
[2026-01-16 12:57:02]     "pilotErrorDiag": "",
[2026-01-16 12:57:02]  *** Listing of results directory ***
[2026-01-16 12:57:02] total 730816
[2026-01-16 12:57:02] -rw-r--r-- 1 boinc boinc    579449 Jan 14 21:43 pilot3.tar.gz
[2026-01-16 12:57:02] -rw-r--r-- 1 boinc boinc      5112 Jan 14 21:43 queuedata.json
[2026-01-16 12:57:02] -rwx------ 1 boinc boinc     36322 Jan 14 21:43 runpilot2-wrapper.sh
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc       100 Jan 16 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 12:57:02] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 11:21 run_atlas
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc       105 Jan 16 11:21 job.xml
[2026-01-16 12:57:02] -rw-r--r-- 2 boinc boinc 590730159 Jan 16 11:21 EVNT.32794306._001433.pool.root.1
[2026-01-16 12:57:02] -rw-r--r-- 2 boinc boinc     15847 Jan 16 11:21 start_atlas.sh
[2026-01-16 12:57:02] drwxrwx--x 2 boinc boinc      4096 Jan 16 11:21 shared
[2026-01-16 12:57:02] -rw-r--r-- 2 boinc boinc    592402 Jan 16 11:21 input.tar.gz
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 11:21 init_data.xml
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc         0 Jan 16 11:21 boinc_setup_complete
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc         0 Jan 16 11:21 boinc_lockfile
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc      2508 Jan 16 11:22 pandaJob.out
[2026-01-16 12:57:02] -rw------- 1 boinc boinc   1004075 Jan 16 11:22 agis_schedconf.cvmfs.json
[2026-01-16 12:57:02] -rw------- 1 boinc boinc   1516246 Jan 16 11:22 agis_ddmendpoints.agis.ALL.json
[2026-01-16 12:57:02] drwx------ 5 boinc boinc      4096 Jan 16 11:22 pilot3
[2026-01-16 12:57:02] -rw------- 1 boinc boinc 151369042 Jan 16 12:54 HITS.48215263._035856.pool.root.1
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc       530 Jan 16 12:54 boinc_task_state.xml
[2026-01-16 12:57:02] -rw------- 1 boinc boinc      1020 Jan 16 12:55 memory_monitor_summary.json
[2026-01-16 12:57:02] -rw------- 1 boinc boinc    384176 Jan 16 12:55 log.48215263._035856.job.log.tgz.1
[2026-01-16 12:57:02] -rw------- 1 boinc boinc        95 Jan 16 12:55 pilot_heartbeat.json
[2026-01-16 12:57:02] -rw------- 1 boinc boinc      7727 Jan 16 12:56 heartbeat.json
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 12:56 boinc_mmap_file
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc        27 Jan 16 12:56 wrapper_checkpoint.txt
[2026-01-16 12:57:02] -rw------- 1 boinc boinc      5106 Jan 16 12:57 pilotlog.txt
[2026-01-16 12:57:02] -rw------- 1 boinc boinc    778709 Jan 16 12:57 log.48215263._035856.job.log.1
[2026-01-16 12:57:02] -rw------- 1 boinc boinc       357 Jan 16 12:57 output.list
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc       620 Jan 16 12:57 runtime_log
[2026-01-16 12:57:02] -rw------- 1 boinc boinc   1177600 Jan 16 12:57 result.tar.gz
[2026-01-16 12:57:02] -rw------- 1 boinc boinc       651 Jan 16 12:57 t7ZMDmfpN08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7gmKDmpdo2Dm.diag
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 12:57 runtime_log.err
[2026-01-16 12:57:02] -rw-rw-r-- 1 boinc boinc     22063 Jan 16 12:57 stderr.txt
[2026-01-16 12:57:02] HITS file was successfully produced:
[2026-01-16 12:57:02] -rw------- 1 boinc boinc 151369042 Jan 16 12:54 shared/HITS.pool.root.1
[2026-01-16 12:57:02]  *** Contents of shared directory: ***
[2026-01-16 12:57:02] total 726468
[2026-01-16 12:57:02] -rw-r--r-- 2 boinc boinc 590730159 Jan 16 11:21 ATLAS.root_0
[2026-01-16 12:57:02] -rw-r--r-- 2 boinc boinc     15847 Jan 16 11:21 start_atlas.sh
[2026-01-16 12:57:02] -rw-r--r-- 2 boinc boinc    592402 Jan 16 11:21 input.tar.gz
[2026-01-16 12:57:02] -rw------- 1 boinc boinc 151369042 Jan 16 12:54 HITS.pool.root.1
[2026-01-16 12:57:02] -rw------- 1 boinc boinc   1177600 Jan 16 12:57 result.tar.gz
12:57:03 (4189083): run_atlas exited; CPU time 30101.775421
12:57:03 (4189083): called boinc_finish(0)

</stderr_txt>
]]>

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