Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:50:20 (8054): wrapper (7.7.26015): starting
22:50:20 (8054): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 22:50:20] Arguments: --nthreads 8
[2026-01-14 22:50:20] Threads: 8
[2026-01-14 22:50:20] Checking for CVMFS
[2026-01-14 22:50:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 22:50:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 22:50:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 22:50:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 22:50:20] 2.11.2.0 5524 189166 135600 155154 0 59 16892574 18432000 1835 130560 0 128001656 99.980 7328581 33846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 22:50:20] CVMFS is ok
[2026-01-14 22:50:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 22:50:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 22:50:20] Further information can be found at the LHC@home message board.
[2026-01-14 22:50:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 22:50:20] Checking for apptainer binary...
[2026-01-14 22:50:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 22:50:20] Running /usr/bin/apptainer --version
[2026-01-14 22:50:21] apptainer version 1.3.2-1.el7
[2026-01-14 22:50:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 22:50:21] c-206-5.aglt2.org
[2026-01-14 22:50:21] apptainer works
[2026-01-14 22:50:21] Set ATHENA_PROC_NUMBER=8
[2026-01-14 22:50:21] Set ATHENA_CORE_NUMBER=8
[2026-01-14 22:50:21] Starting ATLAS job with PandaID=6969708430
[2026-01-14 22:50:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:31:14 (4054): wrapper (7.7.26015): starting
00:31:14 (4054): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 00:31:14] Arguments: --nthreads 8
[2026-01-15 00:31:14] Threads: 8
[2026-01-15 00:31:14] This job has been restarted, cleaning up previous attempt
[2026-01-15 00:31:14] Checking for CVMFS
[2026-01-15 00:31:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 00:31:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 00:31:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 00:31:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 00:31:15] 2.11.2.0 5524 189267 134004 155157 0 9 16928779 18432000 1 130560 0 128229516 99.980 7332865 33847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 00:31:15] CVMFS is ok
[2026-01-15 00:31:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 00:31:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 00:31:15] Further information can be found at the LHC@home message board.
[2026-01-15 00:31:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 00:31:15] Checking for apptainer binary...
[2026-01-15 00:31:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 00:31:15] Running /usr/bin/apptainer --version
[2026-01-15 00:31:15] apptainer version 1.3.2-1.el7
[2026-01-15 00:31:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 00:31:16] c-206-5.aglt2.org
[2026-01-15 00:31:16] apptainer works
[2026-01-15 00:31:16] Set ATHENA_PROC_NUMBER=8
[2026-01-15 00:31:16] Set ATHENA_CORE_NUMBER=8
[2026-01-15 00:31:16] Starting ATLAS job with PandaID=6969708430
[2026-01-15 00:31:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 02:29:50]  *** The last 200 lines of the pilot log: ***
[2026-01-15 02:29:50] 2026-01-15 07:29:31,281 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969708430/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,281 | INFO     | extracted standard info from prmon json
[2026-01-15 02:29:50] 2026-01-15 07:29:31,282 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 02:29:50] 2026-01-15 07:29:31,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 02:29:50] 2026-01-15 07:29:31,282 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 02:29:50] 2026-01-15 07:29:31,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 02:29:50] 2026-01-15 07:29:31,286 | INFO     | fitting pss+swap vs Time
[2026-01-15 02:29:50] 2026-01-15 07:29:31,286 | INFO     | sum of square deviations: 483971865.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,287 | INFO     | sum of deviations: 13792261985.5
[2026-01-15 02:29:50] 2026-01-15 07:29:31,288 | INFO     | mean x: 1768458624.5
[2026-01-15 02:29:50] 2026-01-15 07:29:31,288 | INFO     | mean y: 2505327.6637931033
[2026-01-15 02:29:50] 2026-01-15 07:29:31,288 | INFO     | intersect: -50395144667.1783
[2026-01-15 02:29:50] 2026-01-15 07:29:31,288 | INFO     | chi2: 1.3710174513708835
[2026-01-15 02:29:50] 2026-01-15 07:29:31,289 | INFO     | sum of square deviations: 424045160.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,290 | INFO     | sum of deviations: 13257753359.000002
[2026-01-15 02:29:50] 2026-01-15 07:29:31,290 | INFO     | mean x: 1768458472.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,290 | INFO     | mean y: 2503969.036036036
[2026-01-15 02:29:50] 2026-01-15 07:29:31,290 | INFO     | intersect: -55288272719.489334
[2026-01-15 02:29:50] 2026-01-15 07:29:31,290 | INFO     | chi2: 1.3728034916985896
[2026-01-15 02:29:50] 2026-01-15 07:29:31,290 | INFO     | current chi2=1.3728034916985896 (change=-0.13027115927082203 %)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,290 | INFO     | right removable region: 110
[2026-01-15 02:29:50] 2026-01-15 07:29:31,291 | INFO     | sum of square deviations: 424045160.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,291 | INFO     | sum of deviations: -3393109017.9999995
[2026-01-15 02:29:50] 2026-01-15 07:29:31,291 | INFO     | mean x: 1768458777.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,291 | INFO     | mean y: 2548284.6306306305
[2026-01-15 02:29:50] 2026-01-15 07:29:31,291 | INFO     | intersect: 14153336903.937004
[2026-01-15 02:29:50] 2026-01-15 07:29:31,292 | INFO     | chi2: 0.030493841615754195
[2026-01-15 02:29:50] 2026-01-15 07:29:31,292 | INFO     | current chi2=0.030493841615754195 (change=97.77582396305287 %)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,292 | INFO     | sum of square deviations: 369281342.5
[2026-01-15 02:29:50] 2026-01-15 07:29:31,292 | INFO     | sum of deviations: -4588454221.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,293 | INFO     | mean x: 1768458929.5
[2026-01-15 02:29:50] 2026-01-15 07:29:31,293 | INFO     | mean y: 2551497.3773584906
[2026-01-15 02:29:50] 2026-01-15 07:29:31,293 | INFO     | intersect: 21976293210.93121
[2026-01-15 02:29:50] 2026-01-15 07:29:31,293 | INFO     | chi2: 0.0097920220064491
[2026-01-15 02:29:50] 2026-01-15 07:29:31,293 | INFO     | current chi2=0.0097920220064491 (change=67.88852605114144 %)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,293 | INFO     | sum of square deviations: 319447850.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,294 | INFO     | sum of deviations: -4294632470.9999995
[2026-01-15 02:29:50] 2026-01-15 07:29:31,294 | INFO     | mean x: 1768459082.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,294 | INFO     | mean y: 2550589.1782178218
[2026-01-15 02:29:50] 2026-01-15 07:29:31,294 | INFO     | intersect: 23777579274.430134
[2026-01-15 02:29:50] 2026-01-15 07:29:31,294 | INFO     | chi2: 0.009383651598864801
[2026-01-15 02:29:50] 2026-01-15 07:29:31,294 | INFO     | current chi2=0.009383651598864801 (change=4.170440051251352 %)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,295 | INFO     | left removable region: 30
[2026-01-15 02:29:50] 2026-01-15 07:29:31,295 | INFO     | sum of square deviations: 158737860.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,295 | INFO     | sum of deviations: -2261582564.0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,295 | INFO     | mean x: 1768459356.5
[2026-01-15 02:29:50] 2026-01-15 07:29:31,295 | INFO     | mean y: 2543914.325
[2026-01-15 02:29:50] 2026-01-15 07:29:31,295 | INFO     | intersect: 25198277596.277496
[2026-01-15 02:29:50] 2026-01-15 07:29:31,296 | INFO     | chi2: 0.008387888936460286
[2026-01-15 02:29:50] 2026-01-15 07:29:31,296 | INFO     | current memory leak: -14.25 B/s (using 80 data points, chi2=0.01)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,296 | INFO     | could have reported an average CPU frequency of 2159 MHz (7 samples)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,296 | INFO     | ..............................
[2026-01-15 02:29:50] 2026-01-15 07:29:31,296 | INFO     | . Timing measurements:
[2026-01-15 02:29:50] 2026-01-15 07:29:31,297 | INFO     | . get job = 0 s
[2026-01-15 02:29:50] 2026-01-15 07:29:31,297 | INFO     | . initial setup = 1 s
[2026-01-15 02:29:50] 2026-01-15 07:29:31,297 | INFO     | . payload setup = 6 s
[2026-01-15 02:29:50] 2026-01-15 07:29:31,297 | INFO     | . stage-in = 0 s
[2026-01-15 02:29:50] 2026-01-15 07:29:31,297 | INFO     | . payload execution = 7045 s
[2026-01-15 02:29:50] 2026-01-15 07:29:31,297 | INFO     | . stage-out = 1 s
[2026-01-15 02:29:50] 2026-01-15 07:29:31,297 | INFO     | . log creation = 0 s
[2026-01-15 02:29:50] 2026-01-15 07:29:31,297 | INFO     | ..............................
[2026-01-15 02:29:50] 2026-01-15 07:29:31,379 | INFO     | 
[2026-01-15 02:29:50] 2026-01-15 07:29:31,379 | INFO     | job summary report
[2026-01-15 02:29:50] 2026-01-15 07:29:31,379 | INFO     | --------------------------------------------------
[2026-01-15 02:29:50] 2026-01-15 07:29:31,379 | INFO     | PanDA job id: 6969708430
[2026-01-15 02:29:50] 2026-01-15 07:29:31,379 | INFO     | task id: 48215263
[2026-01-15 02:29:50] 2026-01-15 07:29:31,379 | INFO     | errors: (none)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,379 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | pilot state: finished 
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | transexitcode: 0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | exeerrorcode: 0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | exeerrordiag: 
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | exitcode: 0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | exitmsg: OK
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | cpuconsumptiontime: 52787 s
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | nevents: 400
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | neventsw: 0
[2026-01-15 02:29:50] 2026-01-15 07:29:31,380 | INFO     | pid: 2282
[2026-01-15 02:29:50] 2026-01-15 07:29:31,381 | INFO     | pgrp: 2282
[2026-01-15 02:29:50] 2026-01-15 07:29:31,381 | INFO     | corecount: 8
[2026-01-15 02:29:50] 2026-01-15 07:29:31,381 | INFO     | event service: False
[2026-01-15 02:29:50] 2026-01-15 07:29:31,381 | INFO     | sizes: {0: 2283781, 1: 2283980, 5: 2284242, 11: 2284298, 7055: 2311459, 7058: 2320457, 7061: 2320641, 7065: 2320835}
[2026-01-15 02:29:50] 2026-01-15 07:29:31,381 | INFO     | --------------------------------------------------
[2026-01-15 02:29:50] 2026-01-15 07:29:31,381 | INFO     | 
[2026-01-15 02:29:50] 2026-01-15 07:29:31,381 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-15 02:29:50] 2026-01-15 07:29:31,403 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,403 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,403 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,405 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,405 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 02:29:50] 2026-01-15 07:29:31,405 | INFO     | job 6969708430 has completed (purged errors)
[2026-01-15 02:29:50] 2026-01-15 07:29:31,406 | INFO     | overall cleanup function is called
[2026-01-15 02:29:50] 2026-01-15 07:29:32,190 | INFO     | PID=15548 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 02:29:50] 2026-01-15 07:29:32,190 | INFO     | .. there are 2 such processes running
[2026-01-15 02:29:50] 2026-01-15 07:29:32,413 | INFO     | --- collectZombieJob: --- 10, [2282]
[2026-01-15 02:29:50] 2026-01-15 07:29:32,413 | INFO     | zombie collector waiting for pid 2282
[2026-01-15 02:29:50] 2026-01-15 07:29:32,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 02:29:50] 2026-01-15 07:29:32,413 | INFO     | collected zombie processes
[2026-01-15 02:29:50] 2026-01-15 07:29:32,413 | INFO     | will attempt to kill all subprocesses of pid=2282
[2026-01-15 02:29:50] 2026-01-15 07:29:32,504 | INFO     | process IDs to be killed: [2282] (in reverse order)
[2026-01-15 02:29:50] 2026-01-15 07:29:32,551 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 02:29:50] 2026-01-15 07:29:32,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 02:29:50] 2026-01-15 07:29:32,554 | INFO     | did not find any defunct processes belonging to 2282
[2026-01-15 02:29:50] 2026-01-15 07:29:32,556 | INFO     | did not find any defunct processes belonging to 2282
[2026-01-15 02:29:50] 2026-01-15 07:29:32,556 | INFO     | ready for new job
[2026-01-15 02:29:50] 2026-01-15 07:29:32,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 02:29:50] 2026-01-15 07:29:32,557 | INFO     | ***************************************
[2026-01-15 02:29:50] 2026-01-15 07:29:32,557 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 02:29:50] 2026-01-15 07:29:32,558 | INFO     | ***************************************
[2026-01-15 02:29:50] 2026-01-15 07:29:32,558 | INFO     | 
[2026-01-15 02:29:50] 2026-01-15 07:29:32,558 | INFO     | architecture information:
[2026-01-15 02:29:50] 2026-01-15 07:29:32,559 | INFO     | executing command: cat /etc/os-release
[2026-01-15 02:29:50] 2026-01-15 07:29:32,574 | INFO     | cat /etc/os-release:
[2026-01-15 02:29:50] NAME="CentOS Linux"
[2026-01-15 02:29:50] VERSION="7 (Core)"
[2026-01-15 02:29:50] ID="centos"
[2026-01-15 02:29:50] ID_LIKE="rhel fedora"
[2026-01-15 02:29:50] VERSION_ID="7"
[2026-01-15 02:29:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 02:29:50] ANSI_COLOR="0;31"
[2026-01-15 02:29:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 02:29:50] HOME_URL="https://www.centos.org/"
[2026-01-15 02:29:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 02:29:50] 
[2026-01-15 02:29:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 02:29:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 02:29:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 02:29:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 02:29:50] 
[2026-01-15 02:29:50] 2026-01-15 07:29:32,574 | INFO     | ***************************************
[2026-01-15 02:29:50] 2026-01-15 07:29:33,077 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-15 02:29:50] 2026-01-15 07:29:33,094 | INFO     | sufficient remaining disk space (27100446720 B)
[2026-01-15 02:29:50] 2026-01-15 07:29:33,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 02:29:50] 2026-01-15 07:29:33,094 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 02:29:50] 2026-01-15 07:29:33,095 | INFO     | update_server=False
[2026-01-15 02:29:50] 2026-01-15 07:29:33,095 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 02:29:50] 2026-01-15 07:29:33,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 02:29:50] 2026-01-15 07:29:33,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 02:29:50] 2026-01-15 07:29:33,095 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-15 02:29:50] 2026-01-15 07:29:33,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 02:29:50] 2026-01-15 07:29:33,096 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 02:29:50] 2026-01-15 07:29:33,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 02:29:50] 2026-01-15 07:29:33,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 02:29:50] 2026-01-15 07:29:33,355 | INFO     | all data control threads have been joined
[2026-01-15 02:29:50] 2026-01-15 07:29:33,368 | INFO     | all job control threads have been joined
[2026-01-15 02:29:50] 2026-01-15 07:29:33,540 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 02:29:50] 2026-01-15 07:29:33,541 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 02:29:50] 2026-01-15 07:29:33,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 02:29:50] 2026-01-15 07:29:33,541 | INFO     | will abort loop
[2026-01-15 02:29:50] 2026-01-15 07:29:34,100 | INFO     | [job] retrieve thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:34,101 | INFO     | [job] queue monitor thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:34,158 | INFO     | all payload control threads have been joined
[2026-01-15 02:29:50] 2026-01-15 07:29:34,361 | INFO     | [data] control thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:34,371 | INFO     | [job] control thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:34,500 | INFO     | [payload] failed_post thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:34,546 | INFO     | [job] job monitor thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:34,847 | INFO     | [data] copytool_in thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:35,051 | INFO     | [job] validate thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:35,061 | INFO     | [payload] validate_post thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:35,069 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:35,101 | INFO     | [data] copytool_out thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:35,147 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:35,163 | INFO     | [payload] control thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:35,544 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:37,102 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:41,076 | INFO     | [monitor] cgroup control has ended
[2026-01-15 02:29:50] 2026-01-15 07:29:43,792 | INFO     | job.realtimelogging is not enabled
[2026-01-15 02:29:50] 2026-01-15 07:29:44,797 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 02:29:50] 2026-01-15 07:29:45,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837764126528)>', '<ExcThread(monitor, started 139837323589376)>']
[2026-01-15 02:29:50] 2026-01-15 07:29:46,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 02:29:50] 2026-01-15 07:29:46,163 | INFO     | [monitor] control thread has ended
[2026-01-15 02:29:50] 2026-01-15 07:29:50,321 | INFO     | all workflow threads have been joined
[2026-01-15 02:29:50] 2026-01-15 07:29:50,321 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 02:29:50] 2026-01-15 07:29:50,322 | INFO     | traces error code: 0
[2026-01-15 02:29:50] 2026-01-15 07:29:50,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 02:29:50] 2026-01-15 07:29:50,403 [wrapper] ==== pilot stdout END ====
[2026-01-15 02:29:50] 2026-01-15 07:29:50,406 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 02:29:50] 2026-01-15 07:29:50,410 [wrapper] pilotpid: 15548
[2026-01-15 02:29:50] 2026-01-15 07:29:50,413 [wrapper] Pilot exit status: 0
[2026-01-15 02:29:50] 2026-01-15 07:29:50,425 [wrapper] pandaids: 6969708430 6969708430
[2026-01-15 02:29:50] 2026-01-15 07:29:50,459 [wrapper] cleanup supervisor_pilot  5565 15551
[2026-01-15 02:29:50] 2026-01-15 07:29:50,463 [wrapper] Test setup, not cleaning
[2026-01-15 02:29:50] 2026-01-15 07:29:50,467 [wrapper] apfmon messages muted
[2026-01-15 02:29:50] 2026-01-15 07:29:50,471 [wrapper] ==== wrapper stdout END ====
[2026-01-15 02:29:50] 2026-01-15 07:29:50,474 [wrapper] ==== wrapper stderr END ====
[2026-01-15 02:29:50]  *** Error codes and diagnostics ***
[2026-01-15 02:29:50]     "exeErrorCode": 0,
[2026-01-15 02:29:50]     "exeErrorDiag": "",
[2026-01-15 02:29:50]     "pilotErrorCode": 0,
[2026-01-15 02:29:50]     "pilotErrorDiag": "",
[2026-01-15 02:29:50]  *** Listing of results directory ***
[2026-01-15 02:29:50] total 1326684
[2026-01-15 02:29:50] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-15 02:29:50] -rwx------ 1 boincer umatlas     36322 Jan 14 16:43 runpilot2-wrapper.sh
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 16:43 pilot3.tar.gz
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 16:43 queuedata.json
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas       100 Jan 14 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 02:29:50] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 22:50 run_atlas
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas       105 Jan 14 22:50 job.xml
[2026-01-15 02:29:50] -rw-r--r-- 3 boincer umatlas 599729452 Jan 14 22:50 EVNT.32794306._001397.pool.root.1
[2026-01-15 02:29:50] -rw-r--r-- 3 boincer umatlas 599729452 Jan 14 22:50 ATLAS.root_0
[2026-01-15 02:29:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 22:50 start_atlas.sh
[2026-01-15 02:29:50] drwxrwx--x 2 boincer umatlas      4096 Jan 14 22:50 shared
[2026-01-15 02:29:50] -rw-r--r-- 2 boincer umatlas    592397 Jan 14 22:50 input.tar.gz
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas         0 Jan 14 22:50 boinc_lockfile
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 00:31 pandaJob.out
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas        57 Jan 15 00:31 setup.sh.local
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas    999472 Jan 15 00:31 agis_schedconf.cvmfs.json
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas      5950 Jan 15 02:27 init_data.xml
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas 152358978 Jan 15 02:28 HITS.48215263._034977.pool.root.1
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas       532 Jan 15 02:28 boinc_task_state.xml
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas        96 Jan 15 02:29 pilot_heartbeat.json
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas      1059 Jan 15 02:29 memory_monitor_summary.json
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas   1516246 Jan 15 02:29 agis_ddmendpoints.agis.ALL.json
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas    373734 Jan 15 02:29 log.48215263._034977.job.log.tgz.1
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas      7847 Jan 15 02:29 heartbeat.json
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 02:29 boinc_mmap_file
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas        28 Jan 15 02:29 wrapper_checkpoint.txt
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas      4810 Jan 15 02:29 pilotlog.txt
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas   1006037 Jan 15 02:29 log.48215263._034977.job.log.1
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas       357 Jan 15 02:29 output.list
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas       620 Jan 15 02:29 runtime_log
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas   1402880 Jan 15 02:29 result.tar.gz
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas       782 Jan 15 02:29 yfPODmGpN08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNksKDmENI8fm.diag
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas      9422 Jan 15 02:29 runtime_log.err
[2026-01-15 02:29:50] -rw-r--r-- 1 boincer umatlas     23202 Jan 15 02:29 stderr.txt
[2026-01-15 02:29:50] HITS file was successfully produced:
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas 152358978 Jan 15 02:28 shared/HITS.pool.root.1
[2026-01-15 02:29:50]  *** Contents of shared directory: ***
[2026-01-15 02:29:50] total 736444
[2026-01-15 02:29:50] -rw-r--r-- 3 boincer umatlas 599729452 Jan 14 22:50 ATLAS.root_0
[2026-01-15 02:29:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 22:50 start_atlas.sh
[2026-01-15 02:29:50] -rw-r--r-- 2 boincer umatlas    592397 Jan 14 22:50 input.tar.gz
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas 152358978 Jan 15 02:28 HITS.pool.root.1
[2026-01-15 02:29:50] -rw------- 1 boincer umatlas   1402880 Jan 15 02:29 result.tar.gz
02:29:52 (4054): run_atlas exited; CPU time 52868.924886
02:29:52 (4054): called boinc_finish(0)

</stderr_txt>
]]>

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