Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:58:53 (2131): wrapper (7.7.26015): starting
21:58:53 (2131): wrapper: running run_atlas (--nthreads 12)
[2026-01-14 21:58:53] Arguments: --nthreads 12
[2026-01-14 21:58:53] Threads: 12
[2026-01-14 21:58:53] Checking for CVMFS
[2026-01-14 21:58:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 21:58:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 21:58:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 21:58:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 21:58:53] 2.11.2.0 2913 359112 96532 155152 3 57 18068777 20275200 1 130560 1 152728007 99.948 21840405 15993 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-14 21:58:53] CVMFS is ok
[2026-01-14 21:58:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-14 21:58:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-14 21:58:53] Further information can be found at the LHC@home message board.
[2026-01-14 21:58:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 21:58:53] Checking for apptainer binary...
[2026-01-14 21:58:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 21:58:53] Running /usr/bin/apptainer --version
[2026-01-14 21:58:54] apptainer version 1.3.2-1.el7
[2026-01-14 21:58:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 21:58:55] c-205-6.aglt2.org
[2026-01-14 21:58:55] apptainer works
[2026-01-14 21:58:55] Set ATHENA_PROC_NUMBER=12
[2026-01-14 21:58:55] Set ATHENA_CORE_NUMBER=12
[2026-01-14 21:58:55] Starting ATLAS job with PandaID=6969632789
[2026-01-14 21:58:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 22:47:43]  *** The last 200 lines of the pilot log: ***
[2026-01-14 22:47:43]  status_code=0
[2026-01-14 22:47:43]  storage_token=
[2026-01-14 22:47:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969632789/log.48215263._034344.job.log.tgz.1
[2026-01-14 22:47:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/b0/log.48215263._034344.job.log.tgz.1
[2026-01-14 22:47:43]  workdir=None
[2026-01-14 22:47:43] ]
[2026-01-14 22:47:43] 2026-01-15 03:47:03,115 | INFO     | transferring file log.48215263._034344.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969632789/log.48215263._034344.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-14 22:47:43] 2026-01-15 03:47:03,115 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969632789/log.48215263._034344.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._034344.job
[2026-01-14 22:47:43] 2026-01-15 03:47:03,137 | INFO     | adding to output.list: log.48215263._034344.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/b0/log.48215263._034344.job.log.tg
[2026-01-14 22:47:43] 2026-01-15 03:47:03,138 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-14 22:47:43] 2026-01-15 03:47:03,139 | INFO     | summary of transferred files:
[2026-01-14 22:47:43] 2026-01-15 03:47:03,139 | INFO     |  -- lfn=log.48215263._034344.job.log.tgz.1, status_code=0, status=transferred
[2026-01-14 22:47:43] 2026-01-15 03:47:03,139 | INFO     | stage-out finished correctly
[2026-01-14 22:47:43] 2026-01-15 03:47:04,166 | INFO     | time since job start (2873s) is within the limit (349056.0s)
[2026-01-14 22:47:43] 2026-01-15 03:47:06,160 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-14 22:47:43] 2026-01-15 03:47:06,176 | INFO     | time since job start (2875s) is within the limit (349056.0s)
[2026-01-14 22:47:43] 2026-01-15 03:47:06,240 | INFO     | job 6969632789 has state=finished
[2026-01-14 22:47:43] 2026-01-15 03:47:06,240 | INFO     | preparing for final server update for job 6969632789 in state='finished'
[2026-01-14 22:47:43] 2026-01-15 03:47:06,241 | INFO     | this job has now completed (state=finished)
[2026-01-14 22:47:43] 2026-01-15 03:47:06,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-14 22:47:43] 2026-01-15 03:47:06,241 | INFO     | log transfer has been attempted: DONE
[2026-01-14 22:47:43] 2026-01-15 03:47:06,241 | INFO     | job 6969632789 has finished - writing final server update
[2026-01-14 22:47:43] 2026-01-15 03:47:06,242 | INFO     | total number of processed events: 400 (read)
[2026-01-14 22:47:43] 2026-01-15 03:47:06,243 | INFO     | executing command: lscpu
[2026-01-14 22:47:43] 2026-01-15 03:47:06,268 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-14 22:47:43] 2026-01-15 03:47:06,339 | WARNING  | process 12651 can no longer be monitored (due to stat problems) - aborting
[2026-01-14 22:47:43] 2026-01-15 03:47:06,340 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969632789/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 22:47:43] 2026-01-15 03:47:06,423 | INFO     | number of running child processes to parent process 12651: 1
[2026-01-14 22:47:43] 2026-01-15 03:47:06,423 | INFO     | maximum number of monitored processes: 6
[2026-01-14 22:47:43] 2026-01-15 03:47:07,301 | INFO     | PID=6283 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 22:47:43] 2026-01-15 03:47:08,302 | INFO     | time since job start (2877s) is within the limit (349056.0s)
[2026-01-14 22:47:43] 2026-01-15 03:47:08,926 | INFO     | monitor loop #217: job 0:6969632789 is in state 'finished'
[2026-01-14 22:47:43] 2026-01-15 03:47:08,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 22:47:43] 2026-01-15 03:47:10,307 | INFO     | time since job start (2879s) is within the limit (349056.0s)
[2026-01-14 22:47:43] 2026-01-15 03:47:11,430 | INFO     | monitor loop #218: job 0:6969632789 is in state 'finished'
[2026-01-14 22:47:43] 2026-01-15 03:47:11,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 22:47:43] 2026-01-15 03:47:11,884 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-14 22:47:43] 2026-01-15 03:47:11,888 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2026-01-14 22:47:43] 2026-01-15 03:47:11,890 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969632789/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 22:47:43] 2026-01-15 03:47:11,890 | INFO     | extracted standard info from prmon json
[2026-01-14 22:47:43] 2026-01-15 03:47:11,890 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 22:47:43] 2026-01-15 03:47:11,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 22:47:43] 2026-01-15 03:47:11,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 22:47:43] 2026-01-15 03:47:11,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 22:47:43] 2026-01-15 03:47:11,892 | INFO     | fitting pss+swap vs Time
[2026-01-14 22:47:43] 2026-01-15 03:47:11,892 | INFO     | sum of square deviations: 19832930.0
[2026-01-14 22:47:43] 2026-01-15 03:47:11,893 | INFO     | sum of deviations: -252305028.0
[2026-01-14 22:47:43] 2026-01-15 03:47:11,893 | INFO     | mean x: 1768447474.5
[2026-01-14 22:47:43] 2026-01-15 03:47:11,893 | INFO     | mean y: 2725475.4
[2026-01-14 22:47:43] 2026-01-15 03:47:11,893 | INFO     | intersect: 22500066492.095554
[2026-01-14 22:47:43] 2026-01-15 03:47:11,893 | INFO     | chi2: 0.015539222776742372
[2026-01-14 22:47:43] 2026-01-15 03:47:11,893 | INFO     | current memory leak: -12.72 B/s (using 40 data points, chi2=0.02)
[2026-01-14 22:47:43] 2026-01-15 03:47:11,894 | INFO     | could have reported an average CPU frequency of 1913 MHz (5 samples)
[2026-01-14 22:47:43] 2026-01-15 03:47:11,894 | INFO     | ..............................
[2026-01-14 22:47:43] 2026-01-15 03:47:11,894 | INFO     | . Timing measurements:
[2026-01-14 22:47:43] 2026-01-15 03:47:11,894 | INFO     | . get job = 0 s
[2026-01-14 22:47:43] 2026-01-15 03:47:11,894 | INFO     | . initial setup = 2 s
[2026-01-14 22:47:43] 2026-01-15 03:47:11,894 | INFO     | . payload setup = 7 s
[2026-01-14 22:47:43] 2026-01-15 03:47:11,895 | INFO     | . stage-in = 0 s
[2026-01-14 22:47:43] 2026-01-15 03:47:11,895 | INFO     | . payload execution = 2844 s
[2026-01-14 22:47:43] 2026-01-15 03:47:11,895 | INFO     | . stage-out = 0 s
[2026-01-14 22:47:43] 2026-01-15 03:47:11,895 | INFO     | . log creation = 0 s
[2026-01-14 22:47:43] 2026-01-15 03:47:11,895 | INFO     | ..............................
[2026-01-14 22:47:43] 2026-01-15 03:47:11,975 | INFO     | 
[2026-01-14 22:47:43] 2026-01-15 03:47:11,975 | INFO     | job summary report
[2026-01-14 22:47:43] 2026-01-15 03:47:11,975 | INFO     | --------------------------------------------------
[2026-01-14 22:47:43] 2026-01-15 03:47:11,976 | INFO     | PanDA job id: 6969632789
[2026-01-14 22:47:43] 2026-01-15 03:47:11,976 | INFO     | task id: 48215263
[2026-01-14 22:47:43] 2026-01-15 03:47:11,976 | INFO     | errors: (none)
[2026-01-14 22:47:43] 2026-01-15 03:47:11,976 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 22:47:43] 2026-01-15 03:47:11,976 | INFO     | pilot state: finished 
[2026-01-14 22:47:43] 2026-01-15 03:47:11,976 | INFO     | transexitcode: 0
[2026-01-14 22:47:43] 2026-01-15 03:47:11,977 | INFO     | exeerrorcode: 0
[2026-01-14 22:47:43] 2026-01-15 03:47:11,977 | INFO     | exeerrordiag: 
[2026-01-14 22:47:43] 2026-01-15 03:47:11,977 | INFO     | exitcode: 0
[2026-01-14 22:47:43] 2026-01-15 03:47:11,977 | INFO     | exitmsg: OK
[2026-01-14 22:47:43] 2026-01-15 03:47:11,977 | INFO     | cpuconsumptiontime: 30126 s
[2026-01-14 22:47:43] 2026-01-15 03:47:11,977 | INFO     | nevents: 400
[2026-01-14 22:47:43] 2026-01-15 03:47:11,977 | INFO     | neventsw: 0
[2026-01-14 22:47:43] 2026-01-15 03:47:11,978 | INFO     | pid: 12651
[2026-01-14 22:47:43] 2026-01-15 03:47:11,978 | INFO     | pgrp: 12651
[2026-01-14 22:47:43] 2026-01-15 03:47:11,978 | INFO     | corecount: 12
[2026-01-14 22:47:43] 2026-01-15 03:47:11,978 | INFO     | event service: False
[2026-01-14 22:47:43] 2026-01-15 03:47:11,978 | INFO     | sizes: {0: 2283951, 5: 2284213, 11: 2284269, 2854: 2309538, 2855: 2318536, 2858: 2318592, 2864: 2318946}
[2026-01-14 22:47:43] 2026-01-15 03:47:11,978 | INFO     | --------------------------------------------------
[2026-01-14 22:47:43] 2026-01-15 03:47:11,978 | INFO     | 
[2026-01-14 22:47:43] 2026-01-15 03:47:11,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-14 22:47:43] 2026-01-15 03:47:12,000 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,000 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,000 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,001 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,002 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,003 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 22:47:43] 2026-01-15 03:47:12,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,003 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 22:47:43] 2026-01-15 03:47:12,003 | INFO     | job 6969632789 has completed (purged errors)
[2026-01-14 22:47:43] 2026-01-15 03:47:12,004 | INFO     | overall cleanup function is called
[2026-01-14 22:47:43] 2026-01-15 03:47:13,012 | INFO     | --- collectZombieJob: --- 10, [12651]
[2026-01-14 22:47:43] 2026-01-15 03:47:13,012 | INFO     | zombie collector waiting for pid 12651
[2026-01-14 22:47:43] 2026-01-15 03:47:13,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 22:47:43] 2026-01-15 03:47:13,012 | INFO     | collected zombie processes
[2026-01-14 22:47:43] 2026-01-15 03:47:13,012 | INFO     | will attempt to kill all subprocesses of pid=12651
[2026-01-14 22:47:43] 2026-01-15 03:47:13,106 | INFO     | process IDs to be killed: [12651] (in reverse order)
[2026-01-14 22:47:43] 2026-01-15 03:47:13,156 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 22:47:43] 2026-01-15 03:47:13,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 22:47:43] 2026-01-15 03:47:13,160 | INFO     | did not find any defunct processes belonging to 12651
[2026-01-14 22:47:43] 2026-01-15 03:47:13,162 | INFO     | did not find any defunct processes belonging to 12651
[2026-01-14 22:47:43] 2026-01-15 03:47:13,162 | INFO     | ready for new job
[2026-01-14 22:47:43] 2026-01-15 03:47:13,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 22:47:43] 2026-01-15 03:47:13,163 | INFO     | ***************************************
[2026-01-14 22:47:43] 2026-01-15 03:47:13,163 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 22:47:43] 2026-01-15 03:47:13,163 | INFO     | ***************************************
[2026-01-14 22:47:43] 2026-01-15 03:47:13,163 | INFO     | 
[2026-01-14 22:47:43] 2026-01-15 03:47:13,164 | INFO     | architecture information:
[2026-01-14 22:47:43] 2026-01-15 03:47:13,164 | INFO     | executing command: cat /etc/os-release
[2026-01-14 22:47:43] 2026-01-15 03:47:13,176 | INFO     | cat /etc/os-release:
[2026-01-14 22:47:43] NAME="CentOS Linux"
[2026-01-14 22:47:43] VERSION="7 (Core)"
[2026-01-14 22:47:43] ID="centos"
[2026-01-14 22:47:43] ID_LIKE="rhel fedora"
[2026-01-14 22:47:43] VERSION_ID="7"
[2026-01-14 22:47:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 22:47:43] ANSI_COLOR="0;31"
[2026-01-14 22:47:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 22:47:43] HOME_URL="https://www.centos.org/"
[2026-01-14 22:47:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 22:47:43] 
[2026-01-14 22:47:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 22:47:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 22:47:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 22:47:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 22:47:43] 
[2026-01-14 22:47:43] 2026-01-15 03:47:13,176 | INFO     | ***************************************
[2026-01-14 22:47:43] 2026-01-15 03:47:13,679 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-14 22:47:43] 2026-01-15 03:47:13,695 | INFO     | sufficient remaining disk space (28628221952 B)
[2026-01-14 22:47:43] 2026-01-15 03:47:13,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 22:47:43] 2026-01-15 03:47:13,695 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 22:47:43] 2026-01-15 03:47:13,695 | INFO     | update_server=False
[2026-01-14 22:47:43] 2026-01-15 03:47:13,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 22:47:43] 2026-01-15 03:47:13,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 22:47:43] 2026-01-15 03:47:13,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 22:47:43] 2026-01-15 03:47:13,933 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 22:47:43] 2026-01-15 03:47:13,933 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 22:47:43] 2026-01-15 03:47:13,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 22:47:43] 2026-01-15 03:47:13,934 | INFO     | will abort loop
[2026-01-14 22:47:43] 2026-01-15 03:47:14,478 | INFO     | all job control threads have been joined
[2026-01-14 22:47:43] 2026-01-15 03:47:14,672 | INFO     | all data control threads have been joined
[2026-01-14 22:47:43] 2026-01-15 03:47:14,701 | INFO     | [job] retrieve thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:14,702 | INFO     | [job] queue monitor thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:14,767 | INFO     | all payload control threads have been joined
[2026-01-14 22:47:43] 2026-01-15 03:47:14,895 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:14,939 | INFO     | [job] job monitor thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:15,157 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:15,300 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:15,334 | INFO     | [monitor] cgroup control has ended
[2026-01-14 22:47:43] 2026-01-15 03:47:15,419 | INFO     | [data] copytool_in thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:15,483 | INFO     | [job] control thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:15,669 | INFO     | [payload] failed_post thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:15,677 | INFO     | [data] control thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:15,743 | INFO     | [data] copytool_out thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:15,772 | INFO     | [payload] control thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:16,078 | INFO     | [job] validate thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:16,242 | INFO     | [payload] validate_post thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:16,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 22:47:43] 2026-01-15 03:47:20,755 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:23,864 | INFO     | job.realtimelogging is not enabled
[2026-01-14 22:47:43] 2026-01-15 03:47:24,869 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 22:47:43] 2026-01-15 03:47:25,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097525552960)>', '<ExcThread(monitor, started 140097219434240)>']
[2026-01-14 22:47:43] 2026-01-15 03:47:30,389 | INFO     | all workflow threads have been joined
[2026-01-14 22:47:43] 2026-01-15 03:47:30,389 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 22:47:43] 2026-01-15 03:47:30,390 | INFO     | traces error code: 0
[2026-01-14 22:47:43] 2026-01-15 03:47:30,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 22:47:43] 2026-01-15 03:47:43,508 | INFO     | PID=6283 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-14 22:47:43] 2026-01-15 03:47:43,508 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 22:47:43] 2026-01-15 03:47:43,508 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 22:47:43] 2026-01-15 03:47:43,508 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 22:47:43] 2026-01-15 03:47:43,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 22:47:43] 2026-01-15 03:47:43,509 | INFO     | [monitor] control thread has ended
[2026-01-14 22:47:43] 2026-01-15 03:47:43,593 [wrapper] ==== pilot stdout END ====
[2026-01-14 22:47:43] 2026-01-15 03:47:43,597 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 22:47:43] 2026-01-15 03:47:43,601 [wrapper] pilotpid: 6283
[2026-01-14 22:47:43] 2026-01-15 03:47:43,604 [wrapper] Pilot exit status: 0
[2026-01-14 22:47:43] 2026-01-15 03:47:43,621 [wrapper] pandaids: 6969632789
[2026-01-14 22:47:43] 2026-01-15 03:47:43,659 [wrapper] cleanup supervisor_pilot 31235 6284
[2026-01-14 22:47:43] 2026-01-15 03:47:43,663 [wrapper] Test setup, not cleaning
[2026-01-14 22:47:43] 2026-01-15 03:47:43,667 [wrapper] apfmon messages muted
[2026-01-14 22:47:43] 2026-01-15 03:47:43,671 [wrapper] ==== wrapper stdout END ====
[2026-01-14 22:47:43] 2026-01-15 03:47:43,675 [wrapper] ==== wrapper stderr END ====
[2026-01-14 22:47:43]  *** Error codes and diagnostics ***
[2026-01-14 22:47:43]     "exeErrorCode": 0,
[2026-01-14 22:47:43]     "exeErrorDiag": "",
[2026-01-14 22:47:43]     "pilotErrorCode": 0,
[2026-01-14 22:47:43]     "pilotErrorDiag": "",
[2026-01-14 22:47:43]  *** Listing of results directory ***
[2026-01-14 22:47:43] total 740768
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 15:15 queuedata.json
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 15:15 pilot3.tar.gz
[2026-01-14 22:47:43] -rwx------ 1 boincer umatlas     36322 Jan 14 15:16 runpilot2-wrapper.sh
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas       100 Jan 14 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 22:47:43] -rwxr-xr-x 1 boincer umatlas      7986 Jan 14 21:58 run_atlas
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas       105 Jan 14 21:58 job.xml
[2026-01-14 22:47:43] -rw-r--r-- 2 boincer umatlas 597506127 Jan 14 21:58 EVNT.32794306._001373.pool.root.1
[2026-01-14 22:47:43] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 21:58 start_atlas.sh
[2026-01-14 22:47:43] drwxrwx--x 2 boincer umatlas      4096 Jan 14 21:58 shared
[2026-01-14 22:47:43] -rw-r--r-- 2 boincer umatlas    592399 Jan 14 21:58 input.tar.gz
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas         0 Jan 14 21:58 boinc_lockfile
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas      2508 Jan 14 21:58 pandaJob.out
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas        57 Jan 14 21:58 setup.sh.local
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas    999480 Jan 14 21:59 agis_schedconf.cvmfs.json
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas   1516246 Jan 14 21:59 agis_ddmendpoints.agis.ALL.json
[2026-01-14 22:47:43] drwx------ 5 boincer umatlas      4096 Jan 14 21:59 pilot3
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas 155515968 Jan 14 22:46 HITS.48215263._034344.pool.root.1
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas       531 Jan 14 22:46 boinc_task_state.xml
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas        95 Jan 14 22:46 pilot_heartbeat.json
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas      5952 Jan 14 22:46 init_data.xml
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas      1042 Jan 14 22:46 memory_monitor_summary.json
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas    364256 Jan 14 22:47 log.48215263._034344.job.log.tgz.1
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas      7839 Jan 14 22:47 heartbeat.json
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas        27 Jan 14 22:47 wrapper_checkpoint.txt
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas      8192 Jan 14 22:47 boinc_mmap_file
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas       744 Jan 14 22:47 pilotlog.txt
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas    437162 Jan 14 22:47 log.48215263._034344.job.log.1
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas       357 Jan 14 22:47 output.list
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas       620 Jan 14 22:47 runtime_log
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas    819200 Jan 14 22:47 result.tar.gz
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas      9339 Jan 14 22:47 runtime_log.err
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas       658 Jan 14 22:47 iGLODmfTM08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUWmKDmmvj2Nm.diag
[2026-01-14 22:47:43] -rw-r--r-- 1 boincer umatlas     22217 Jan 14 22:47 stderr.txt
[2026-01-14 22:47:43] HITS file was successfully produced:
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas 155515968 Jan 14 22:46 shared/HITS.pool.root.1
[2026-01-14 22:47:43]  *** Contents of shared directory: ***
[2026-01-14 22:47:43] total 736780
[2026-01-14 22:47:43] -rw-r--r-- 2 boincer umatlas 597506127 Jan 14 21:58 ATLAS.root_0
[2026-01-14 22:47:43] -rw-r--r-- 2 boincer umatlas     15847 Jan 14 21:58 start_atlas.sh
[2026-01-14 22:47:43] -rw-r--r-- 2 boincer umatlas    592399 Jan 14 21:58 input.tar.gz
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas 155515968 Jan 14 22:46 HITS.pool.root.1
[2026-01-14 22:47:43] -rw------- 1 boincer umatlas    819200 Jan 14 22:47 result.tar.gz
22:47:45 (2131): run_atlas exited; CPU time 30106.476482
22:47:45 (2131): called boinc_finish(0)

</stderr_txt>
]]>

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