Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:41:30 (3263993): wrapper (7.7.26015): starting
04:41:30 (3263993): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 04:41:30] Arguments: --nthreads 4
[2026-01-15 04:41:30] Threads: 4
[2026-01-15 04:41:30] Checking for CVMFS
[2026-01-15 04:41:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 04:41:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 04:41:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 04:41:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 04:41:30] 2.9.2.0 2429254 1883 95160 155154 0 57 21745327 36864000 0 130560 0 2188181 99.993 73246 16324 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 04:41:30] CVMFS is ok
[2026-01-15 04:41:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 04:41:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 04:41:30] Further information can be found at the LHC@home message board.
[2026-01-15 04:41:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 04:41:30] Checking for apptainer binary...
[2026-01-15 04:41:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 04:41:30] Running /usr/bin/apptainer --version
[2026-01-15 04:41:30] apptainer version 1.4.1-1.1
[2026-01-15 04:41:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 04:41:31] thA309
[2026-01-15 04:41:31] apptainer works
[2026-01-15 04:41:31] Set ATHENA_PROC_NUMBER=4
[2026-01-15 04:41:31] Set ATHENA_CORE_NUMBER=4
[2026-01-15 04:41:31] Starting ATLAS job with PandaID=6969981904
[2026-01-15 04:41:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 05:30:57]  *** The last 200 lines of the pilot log: ***
[2026-01-15 05:30:57] 2026-01-15 04:30:27,436 | INFO     | collected zombie processes
[2026-01-15 05:30:57] 2026-01-15 04:30:27,436 | INFO     | will attempt to kill all subprocesses of pid=3274365
[2026-01-15 05:30:57] 2026-01-15 04:30:27,488 | INFO     | process IDs to be killed: [3274365] (in reverse order)
[2026-01-15 05:30:57] 2026-01-15 04:30:27,525 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 05:30:57] 2026-01-15 04:30:27,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 05:30:57] 2026-01-15 04:30:27,527 | INFO     | did not find any defunct processes belonging to 3274365
[2026-01-15 05:30:57] 2026-01-15 04:30:27,528 | INFO     | did not find any defunct processes belonging to 3274365
[2026-01-15 05:30:57] 2026-01-15 04:30:27,529 | INFO     | ready for new job
[2026-01-15 05:30:57] 2026-01-15 04:30:27,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 05:30:57] 2026-01-15 04:30:27,529 | INFO     | ***************************************
[2026-01-15 05:30:57] 2026-01-15 04:30:27,529 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 05:30:57] 2026-01-15 04:30:27,529 | INFO     | ***************************************
[2026-01-15 05:30:57] 2026-01-15 04:30:27,529 | INFO     | 
[2026-01-15 05:30:57] 2026-01-15 04:30:27,530 | INFO     | architecture information:
[2026-01-15 05:30:57] 2026-01-15 04:30:27,530 | INFO     | executing command: cat /etc/os-release
[2026-01-15 05:30:57] 2026-01-15 04:30:27,545 | INFO     | cat /etc/os-release:
[2026-01-15 05:30:57] NAME="CentOS Linux"
[2026-01-15 05:30:57] VERSION="7 (Core)"
[2026-01-15 05:30:57] ID="centos"
[2026-01-15 05:30:57] ID_LIKE="rhel fedora"
[2026-01-15 05:30:57] VERSION_ID="7"
[2026-01-15 05:30:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 05:30:57] ANSI_COLOR="0;31"
[2026-01-15 05:30:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 05:30:57] HOME_URL="https://www.centos.org/"
[2026-01-15 05:30:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 05:30:57] 
[2026-01-15 05:30:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 05:30:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 05:30:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 05:30:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 05:30:57] 
[2026-01-15 05:30:57] 2026-01-15 04:30:27,545 | INFO     | ***************************************
[2026-01-15 05:30:57] 2026-01-15 04:30:28,049 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 05:30:57] 2026-01-15 04:30:28,068 | INFO     | sufficient remaining disk space (237774045184 B)
[2026-01-15 05:30:57] 2026-01-15 04:30:28,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 05:30:57] 2026-01-15 04:30:28,068 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 05:30:57] 2026-01-15 04:30:28,068 | INFO     | update_server=False
[2026-01-15 05:30:57] 2026-01-15 04:30:28,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 05:30:57] 2026-01-15 04:30:28,255 | INFO     | all payload control threads have been joined
[2026-01-15 05:30:57] 2026-01-15 04:30:28,349 | INFO     | all data control threads have been joined
[2026-01-15 05:30:57] 2026-01-15 04:30:28,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:30:57] 2026-01-15 04:30:28,556 | INFO     | aborting loop
[2026-01-15 05:30:57] 2026-01-15 04:30:28,662 | INFO     | all job control threads have been joined
[2026-01-15 05:30:57] 2026-01-15 04:30:29,073 | INFO     | [job] retrieve thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:29,118 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:29,226 | INFO     | [payload] validate_post thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:29,261 | INFO     | [payload] control thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:29,355 | INFO     | [data] control thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:29,478 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:29,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 05:30:57] 2026-01-15 04:30:29,561 | INFO     | [job] job monitor thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:29,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 05:30:57] 2026-01-15 04:30:29,667 | INFO     | [job] control thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:29,708 | INFO     | [data] copytool_in thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:30,283 | INFO     | [payload] failed_post thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:30,458 | INFO     | [job] validate thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:30,543 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:30,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:30:57] 2026-01-15 04:30:31,517 | INFO     | [data] copytool_out thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:31,941 | INFO     | [job] queue monitor thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:33,644 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:38,411 | INFO     | job.realtimelogging is not enabled
[2026-01-15 05:30:57] 2026-01-15 04:30:39,416 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 05:30:57] 2026-01-15 04:30:42,016 | INFO     | [monitor] cgroup control has ended
[2026-01-15 05:30:57] 2026-01-15 04:30:43,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057852630848)>', '<ExcThread(monitor, started 140056383706880)>']
[2026-01-15 05:30:57] 2026-01-15 04:30:48,425 | INFO     | all workflow threads have been joined
[2026-01-15 05:30:57] 2026-01-15 04:30:48,425 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 05:30:57] 2026-01-15 04:30:48,426 | INFO     | traces error code: 0
[2026-01-15 05:30:57] 2026-01-15 04:30:48,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 05:30:57] 2026-01-15 04:30:57,771 | INFO     | PID=3267787 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 05:30:57] 2026-01-15 04:30:57,771 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 05:30:57] 2026-01-15 04:30:57,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 05:30:57] 2026-01-15 04:30:57,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 05:30:57] 2026-01-15 04:30:57,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 05:30:57] 2026-01-15 04:30:57,771 | INFO     | [monitor] control thread has ended
[2026-01-15 05:30:57] 2026-01-15 04:30:57,850 [wrapper] ==== pilot stdout END ====
[2026-01-15 05:30:57] 2026-01-15 04:30:57,854 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 05:30:57] 2026-01-15 04:30:57,858 [wrapper] pilotpid: 3267787
[2026-01-15 05:30:57] 2026-01-15 04:30:57,862 [wrapper] Pilot exit status: 0
[2026-01-15 05:30:57] 2026-01-15 04:30:57,875 [wrapper] pandaids: 6969981904
[2026-01-15 05:30:57] 2026-01-15 04:30:57,899 [wrapper] cleanup supervisor_pilot 3285008 3267788
[2026-01-15 05:30:57] 2026-01-15 04:30:57,903 [wrapper] Test setup, not cleaning
[2026-01-15 05:30:57] 2026-01-15 04:30:57,907 [wrapper] apfmon messages muted
[2026-01-15 05:30:57] 2026-01-15 04:30:57,911 [wrapper] ==== wrapper stdout END ====
[2026-01-15 05:30:57] 2026-01-15 04:30:57,915 [wrapper] ==== wrapper stderr END ====
[2026-01-15 05:30:57]  *** Error codes and diagnostics ***
[2026-01-15 05:30:57]     "exeErrorCode": 0,
[2026-01-15 05:30:57]     "exeErrorDiag": "",
[2026-01-15 05:30:57]     "pilotErrorCode": 0,
[2026-01-15 05:30:57]     "pilotErrorDiag": "",
[2026-01-15 05:30:57]  *** Listing of results directory ***
[2026-01-15 05:30:57] total 737648
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc    579449 Jan 15 00:30 pilot3.tar.gz
[2026-01-15 05:30:57] -rwx------ 1 boinc boinc     36322 Jan 15 00:32 runpilot2-wrapper.sh
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc      5112 Jan 15 00:35 queuedata.json
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc       100 Jan 15 04:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 05:30:57] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 04:41 run_atlas
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc       105 Jan 15 04:41 job.xml
[2026-01-15 05:30:57] -rw-r--r-- 2 boinc boinc 599999755 Jan 15 04:41 EVNT.32794306._001557.pool.root.1
[2026-01-15 05:30:57] -rw-r--r-- 2 boinc boinc    592402 Jan 15 04:41 input.tar.gz
[2026-01-15 05:30:57] -rw-r--r-- 2 boinc boinc     15847 Jan 15 04:41 start_atlas.sh
[2026-01-15 05:30:57] drwxrwx--x 2 boinc boinc      4096 Jan 15 04:41 shared
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc         0 Jan 15 04:41 boinc_setup_complete
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc      6377 Jan 15 04:41 init_data.xml
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc         0 Jan 15 04:41 boinc_lockfile
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc      2508 Jan 15 04:41 pandaJob.out
[2026-01-15 05:30:57] -rw------- 1 boinc boinc    999472 Jan 15 04:41 agis_schedconf.cvmfs.json
[2026-01-15 05:30:57] -rw------- 1 boinc boinc   1516246 Jan 15 04:41 agis_ddmendpoints.agis.ALL.json
[2026-01-15 05:30:57] drwx------ 5 boinc boinc      4096 Jan 15 04:41 pilot3
[2026-01-15 05:30:57] -rw------- 1 boinc boinc 150027915 Jan 15 05:30 HITS.48215263._039073.pool.root.1
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc       530 Jan 15 05:30 boinc_task_state.xml
[2026-01-15 05:30:57] -rw------- 1 boinc boinc      1019 Jan 15 05:30 memory_monitor_summary.json
[2026-01-15 05:30:57] -rw------- 1 boinc boinc    253501 Jan 15 05:30 log.48215263._039073.job.log.tgz.1
[2026-01-15 05:30:57] -rw------- 1 boinc boinc      7761 Jan 15 05:30 heartbeat.json
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc        27 Jan 15 05:30 wrapper_checkpoint.txt
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc      8192 Jan 15 05:30 boinc_mmap_file
[2026-01-15 05:30:57] -rw------- 1 boinc boinc       747 Jan 15 05:30 pilotlog.txt
[2026-01-15 05:30:57] -rw------- 1 boinc boinc        95 Jan 15 05:30 pilot_heartbeat.json
[2026-01-15 05:30:57] -rw------- 1 boinc boinc    450665 Jan 15 05:30 log.48215263._039073.job.log.1
[2026-01-15 05:30:57] -rw------- 1 boinc boinc       357 Jan 15 05:30 output.list
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc       620 Jan 15 05:30 runtime_log
[2026-01-15 05:30:57] -rw------- 1 boinc boinc    727040 Jan 15 05:30 result.tar.gz
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc      8897 Jan 15 05:30 runtime_log.err
[2026-01-15 05:30:57] -rw------- 1 boinc boinc       657 Jan 15 05:30 rOIKDmZWP08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkEtKDms0c1In.diag
[2026-01-15 05:30:57] -rw-r--r-- 1 boinc boinc     10376 Jan 15 05:30 stderr.txt
[2026-01-15 05:30:57] HITS file was successfully produced:
[2026-01-15 05:30:57] -rw------- 1 boinc boinc 150027915 Jan 15 05:30 shared/HITS.pool.root.1
[2026-01-15 05:30:57]  *** Contents of shared directory: ***
[2026-01-15 05:30:57] total 733768
[2026-01-15 05:30:57] -rw-r--r-- 2 boinc boinc 599999755 Jan 15 04:41 ATLAS.root_0
[2026-01-15 05:30:57] -rw-r--r-- 2 boinc boinc    592402 Jan 15 04:41 input.tar.gz
[2026-01-15 05:30:57] -rw-r--r-- 2 boinc boinc     15847 Jan 15 04:41 start_atlas.sh
[2026-01-15 05:30:57] -rw------- 1 boinc boinc 150027915 Jan 15 05:30 HITS.pool.root.1
[2026-01-15 05:30:57] -rw------- 1 boinc boinc    727040 Jan 15 05:30 result.tar.gz
05:30:59 (3263993): run_atlas exited; CPU time 10795.533178
05:30:59 (3263993): called boinc_finish(0)

</stderr_txt>
]]>

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