Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:18:37 (3243526): wrapper (7.7.26015): starting
08:18:37 (3243526): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 08:18:37] Arguments: --nthreads 12
[2026-01-16 08:18:37] Threads: 12
[2026-01-16 08:18:37] Checking for CVMFS
[2026-01-16 08:18:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 08:18:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 08:18:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 08:18:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 08:18:38] 2.13.3.0 40677 10226 66152 155201 3 236 3989272 4096000 19527 130560 0 81124805 99.981 1145034 231 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 08:18:38] CVMFS is ok
[2026-01-16 08:18:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 08:18:38] Checking for apptainer binary...
[2026-01-16 08:18:38] apptainer is not installed, using version from CVMFS
[2026-01-16 08:18:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 08:18:40] epyc7v12
[2026-01-16 08:18:40] apptainer works
[2026-01-16 08:18:40] Set ATHENA_PROC_NUMBER=12
[2026-01-16 08:18:40] Set ATHENA_CORE_NUMBER=12
[2026-01-16 08:18:40] Starting ATLAS job with PandaID=6969843959
[2026-01-16 08:18:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 09:55:27]  *** The last 200 lines of the pilot log: ***
[2026-01-16 09:55:27] 2026-01-16 09:54:20,211 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-16 09:55:27] 2026-01-16 09:54:20,215 | INFO     | size of work directory /opt/boinc/instance_homes/boinc_31427/slots/0/PanDA_Pilot-6969843959: 4339697 B (within 4404019200 B limit)
[2026-01-16 09:55:27] 2026-01-16 09:54:20,215 | INFO     | pfn file=/opt/boinc/instance_homes/boinc_31427/slots/0/PanDA_Pilot-6969843959/HITS.48215263._037933.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-16 09:55:27] 2026-01-16 09:54:20,216 | INFO     | total size of present files: 0 B (workdir size: 4339697 B)
[2026-01-16 09:55:27] 2026-01-16 09:54:20,216 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31427/slots/0/PanDA_Pilot-6969843959/HITS.48215263._037933.pool.root.1 since it does n
[2026-01-16 09:55:27] 2026-01-16 09:54:20,297 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 09:55:27] 2026-01-16 09:54:21,315 | INFO     | number of running child processes to parent process 3257770: 1
[2026-01-16 09:55:27] 2026-01-16 09:54:21,315 | INFO     | maximum number of monitored processes: 6
[2026-01-16 09:55:27] 2026-01-16 09:54:21,804 | INFO     | time since job start (5711s) is within the limit (349056.0s)
[2026-01-16 09:55:27] 2026-01-16 09:54:23,477 | INFO     | job 6969843959 has state=finished
[2026-01-16 09:55:27] 2026-01-16 09:54:23,478 | INFO     | preparing for final server update for job 6969843959 in state='finished'
[2026-01-16 09:55:27] 2026-01-16 09:54:23,478 | INFO     | this job has now completed (state=finished)
[2026-01-16 09:55:27] 2026-01-16 09:54:23,478 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 09:55:27] 2026-01-16 09:54:23,479 | INFO     | log transfer has been attempted: DONE
[2026-01-16 09:55:27] 2026-01-16 09:54:23,479 | INFO     | job 6969843959 has finished - writing final server update
[2026-01-16 09:55:27] 2026-01-16 09:54:23,479 | INFO     | total number of processed events: 400 (read)
[2026-01-16 09:55:27] 2026-01-16 09:54:23,485 | INFO     | executing command: lscpu
[2026-01-16 09:55:27] 2026-01-16 09:54:23,613 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 09:55:27] 2026-01-16 09:54:23,811 | INFO     | time since job start (5713s) is within the limit (349056.0s)
[2026-01-16 09:55:27] 2026-01-16 09:54:23,818 | INFO     | monitor loop #375: job 0:6969843959 is in state 'finished'
[2026-01-16 09:55:27] 2026-01-16 09:54:23,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:55:27] 2026-01-16 09:54:26,272 | INFO     | PID=3248100 has CPU usage=20.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 09:55:27] 2026-01-16 09:54:26,273 | INFO     | .. there are 22 such processes running
[2026-01-16 09:55:27] 2026-01-16 09:54:26,325 | INFO     | monitor loop #376: job 0:6969843959 is in state 'finished'
[2026-01-16 09:55:27] 2026-01-16 09:54:26,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:55:27] 2026-01-16 09:54:27,273 | INFO     | time since job start (5717s) is within the limit (349056.0s)
[2026-01-16 09:55:27] 2026-01-16 09:54:28,829 | INFO     | monitor loop #377: job 0:6969843959 is in state 'finished'
[2026-01-16 09:55:27] 2026-01-16 09:54:28,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:55:27] 2026-01-16 09:54:29,279 | INFO     | time since job start (5719s) is within the limit (349056.0s)
[2026-01-16 09:55:27] 2026-01-16 09:54:31,284 | INFO     | time since job start (5721s) is within the limit (349056.0s)
[2026-01-16 09:55:27] 2026-01-16 09:54:31,335 | INFO     | monitor loop #378: job 0:6969843959 is in state 'finished'
[2026-01-16 09:55:27] 2026-01-16 09:54:31,335 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:55:27] 2026-01-16 09:54:33,290 | INFO     | time since job start (5723s) is within the limit (349056.0s)
[2026-01-16 09:55:27] 2026-01-16 09:54:33,838 | INFO     | monitor loop #379: job 0:6969843959 is in state 'finished'
[2026-01-16 09:55:27] 2026-01-16 09:54:33,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:55:27] 2026-01-16 09:54:35,297 | INFO     | time since job start (5725s) is within the limit (349056.0s)
[2026-01-16 09:55:27] 2026-01-16 09:54:36,343 | INFO     | monitor loop #380: job 0:6969843959 is in state 'finished'
[2026-01-16 09:55:27] 2026-01-16 09:54:36,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:55:27] 2026-01-16 09:54:36,961 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 09:55:27] 2026-01-16 09:54:36,992 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2395.9084453124988
[2026-01-16 09:55:27] 2026-01-16 09:54:37,019 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/0/PanDA_Pilot-6969843959/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 09:55:27] 2026-01-16 09:54:37,020 | INFO     | extracted standard info from prmon json
[2026-01-16 09:55:27] 2026-01-16 09:54:37,020 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 09:55:27] 2026-01-16 09:54:37,020 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 09:55:27] 2026-01-16 09:54:37,020 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 09:55:27] 2026-01-16 09:54:37,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 09:55:27] 2026-01-16 09:54:37,023 | INFO     | fitting pss+swap vs Time
[2026-01-16 09:55:27] 2026-01-16 09:54:37,023 | INFO     | sum of square deviations: 197203697.5
[2026-01-16 09:55:27] 2026-01-16 09:54:37,024 | INFO     | sum of deviations: 1357488083.0000002
[2026-01-16 09:55:27] 2026-01-16 09:54:37,024 | INFO     | mean x: 1768554515.5
[2026-01-16 09:55:27] 2026-01-16 09:54:37,024 | INFO     | mean y: 2717323.88372093
[2026-01-16 09:55:27] 2026-01-16 09:54:37,024 | INFO     | intersect: -12171454404.955639
[2026-01-16 09:55:27] 2026-01-16 09:54:37,024 | INFO     | chi2: 0.11360786793744619
[2026-01-16 09:55:27] 2026-01-16 09:54:37,024 | INFO     | current memory leak: 6.88 B/s (using 86 data points, chi2=0.11)
[2026-01-16 09:55:27] 2026-01-16 09:54:37,025 | INFO     | could have reported an average CPU frequency of 2399 MHz (7 samples)
[2026-01-16 09:55:27] 2026-01-16 09:54:37,025 | INFO     | ..............................
[2026-01-16 09:55:27] 2026-01-16 09:54:37,025 | INFO     | . Timing measurements:
[2026-01-16 09:55:27] 2026-01-16 09:54:37,025 | INFO     | . get job = 0 s
[2026-01-16 09:55:27] 2026-01-16 09:54:37,025 | INFO     | . initial setup = 2 s
[2026-01-16 09:55:27] 2026-01-16 09:54:37,025 | INFO     | . payload setup = 17 s
[2026-01-16 09:55:27] 2026-01-16 09:54:37,025 | INFO     | . stage-in = 0 s
[2026-01-16 09:55:27] 2026-01-16 09:54:37,025 | INFO     | . payload execution = 5647 s
[2026-01-16 09:55:27] 2026-01-16 09:54:37,026 | INFO     | . stage-out = 1 s
[2026-01-16 09:55:27] 2026-01-16 09:54:37,026 | INFO     | . log creation = 0 s
[2026-01-16 09:55:27] 2026-01-16 09:54:37,026 | INFO     | ..............................
[2026-01-16 09:55:27] 2026-01-16 09:54:37,234 | INFO     | 
[2026-01-16 09:55:27] 2026-01-16 09:54:37,234 | INFO     | job summary report
[2026-01-16 09:55:27] 2026-01-16 09:54:37,234 | INFO     | --------------------------------------------------
[2026-01-16 09:55:27] 2026-01-16 09:54:37,234 | INFO     | PanDA job id: 6969843959
[2026-01-16 09:55:27] 2026-01-16 09:54:37,234 | INFO     | task id: 48215263
[2026-01-16 09:55:27] 2026-01-16 09:54:37,234 | INFO     | errors: (none)
[2026-01-16 09:55:27] 2026-01-16 09:54:37,234 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 09:55:27] 2026-01-16 09:54:37,235 | INFO     | pilot state: finished 
[2026-01-16 09:55:27] 2026-01-16 09:54:37,235 | INFO     | transexitcode: 0
[2026-01-16 09:55:27] 2026-01-16 09:54:37,235 | INFO     | exeerrorcode: 0
[2026-01-16 09:55:27] 2026-01-16 09:54:37,235 | INFO     | exeerrordiag: 
[2026-01-16 09:55:27] 2026-01-16 09:54:37,235 | INFO     | exitcode: 0
[2026-01-16 09:55:27] 2026-01-16 09:54:37,235 | INFO     | exitmsg: OK
[2026-01-16 09:55:27] 2026-01-16 09:54:37,235 | INFO     | cpuconsumptiontime: 31045 s
[2026-01-16 09:55:27] 2026-01-16 09:54:37,235 | INFO     | nevents: 400
[2026-01-16 09:55:27] 2026-01-16 09:54:37,235 | INFO     | neventsw: 0
[2026-01-16 09:55:27] 2026-01-16 09:54:37,236 | INFO     | pid: 3257770
[2026-01-16 09:55:27] 2026-01-16 09:54:37,236 | INFO     | pgrp: 3257770
[2026-01-16 09:55:27] 2026-01-16 09:54:37,236 | INFO     | corecount: 12
[2026-01-16 09:55:27] 2026-01-16 09:54:37,236 | INFO     | event service: False
[2026-01-16 09:55:27] 2026-01-16 09:54:37,236 | INFO     | sizes: {0: 2283124, 1: 2283832, 2: 2284031, 13: 2284031, 15: 2284349, 23: 2284377, 5669: 2311204, 5671: 2320248, 5673: 2320332, 5690: 2320526}
[2026-01-16 09:55:27] 2026-01-16 09:54:37,236 | INFO     | --------------------------------------------------
[2026-01-16 09:55:27] 2026-01-16 09:54:37,236 | INFO     | 
[2026-01-16 09:55:27] 2026-01-16 09:54:37,236 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-01-16 09:55:27] 2026-01-16 09:54:37,300 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,300 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,300 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,300 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,302 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 09:55:27] 2026-01-16 09:54:37,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,302 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 09:55:27] 2026-01-16 09:54:37,304 | INFO     | job 6969843959 has completed (purged errors)
[2026-01-16 09:55:27] 2026-01-16 09:54:37,304 | INFO     | overall cleanup function is called
[2026-01-16 09:55:27] 2026-01-16 09:54:38,320 | INFO     | --- collectZombieJob: --- 10, [3257770]
[2026-01-16 09:55:27] 2026-01-16 09:54:38,320 | INFO     | zombie collector waiting for pid 3257770
[2026-01-16 09:55:27] 2026-01-16 09:54:38,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 09:55:27] 2026-01-16 09:54:38,320 | INFO     | collected zombie processes
[2026-01-16 09:55:27] 2026-01-16 09:54:38,321 | INFO     | will attempt to kill all subprocesses of pid=3257770
[2026-01-16 09:55:27] 2026-01-16 09:54:39,556 | INFO     | process IDs to be killed: [3257770] (in reverse order)
[2026-01-16 09:55:27] 2026-01-16 09:54:40,062 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 09:55:27] 2026-01-16 09:54:40,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 09:55:27] 2026-01-16 09:54:40,098 | INFO     | did not find any defunct processes belonging to 3257770
[2026-01-16 09:55:27] 2026-01-16 09:54:40,135 | INFO     | did not find any defunct processes belonging to 3257770
[2026-01-16 09:55:27] 2026-01-16 09:54:40,136 | INFO     | ready for new job
[2026-01-16 09:55:27] 2026-01-16 09:54:40,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 09:55:27] 2026-01-16 09:54:40,140 | INFO     | ***************************************
[2026-01-16 09:55:27] 2026-01-16 09:54:40,140 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 09:55:27] 2026-01-16 09:54:40,140 | INFO     | ***************************************
[2026-01-16 09:55:27] 2026-01-16 09:54:40,140 | INFO     | 
[2026-01-16 09:55:27] 2026-01-16 09:54:40,158 | INFO     | architecture information:
[2026-01-16 09:55:27] 2026-01-16 09:54:40,161 | INFO     | executing command: cat /etc/os-release
[2026-01-16 09:55:27] 2026-01-16 09:54:40,208 | INFO     | cat /etc/os-release:
[2026-01-16 09:55:27] NAME="CentOS Linux"
[2026-01-16 09:55:27] VERSION="7 (Core)"
[2026-01-16 09:55:27] ID="centos"
[2026-01-16 09:55:27] ID_LIKE="rhel fedora"
[2026-01-16 09:55:27] VERSION_ID="7"
[2026-01-16 09:55:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 09:55:27] ANSI_COLOR="0;31"
[2026-01-16 09:55:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 09:55:27] HOME_URL="https://www.centos.org/"
[2026-01-16 09:55:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 09:55:27] 
[2026-01-16 09:55:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 09:55:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 09:55:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 09:55:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 09:55:27] 
[2026-01-16 09:55:27] 2026-01-16 09:54:40,208 | INFO     | ***************************************
[2026-01-16 09:55:27] 2026-01-16 09:54:40,712 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-01-16 09:55:27] 2026-01-16 09:54:40,755 | INFO     | sufficient remaining disk space (266925506560 B)
[2026-01-16 09:55:27] 2026-01-16 09:54:40,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 09:55:27] 2026-01-16 09:54:40,755 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 09:55:27] 2026-01-16 09:54:40,755 | INFO     | update_server=False
[2026-01-16 09:55:27] 2026-01-16 09:54:40,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 09:55:27] 2026-01-16 09:54:40,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 09:55:27] 2026-01-16 09:54:40,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 09:55:27] 2026-01-16 09:54:40,756 | INFO     | aborting loop
[2026-01-16 09:55:27] 2026-01-16 09:54:40,892 | INFO     | all payload control threads have been joined
[2026-01-16 09:55:27] 2026-01-16 09:54:40,940 | INFO     | all data control threads have been joined
[2026-01-16 09:55:27] 2026-01-16 09:54:41,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 09:55:27] 2026-01-16 09:54:41,480 | INFO     | all job control threads have been joined
[2026-01-16 09:55:27] 2026-01-16 09:54:41,761 | INFO     | [job] job monitor thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:41,762 | INFO     | [job] retrieve thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:41,897 | INFO     | [payload] control thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:41,937 | INFO     | [data] copytool_in thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:41,945 | INFO     | [data] control thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:41,947 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:41,950 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:42,075 | INFO     | [payload] failed_post thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:42,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 09:55:27] 2026-01-16 09:54:42,374 | INFO     | [job] validate thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:42,485 | INFO     | [job] control thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:42,830 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:42,831 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:43,057 | INFO     | [payload] validate_post thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:43,160 | INFO     | [data] copytool_out thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:43,256 | INFO     | [job] queue monitor thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:54:44,763 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 09:55:27] 2026-01-16 09:55:09,949 | INFO     | PID=3248100 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 09:55:27] 2026-01-16 09:55:09,949 | INFO     | .. there are 22 such processes running
[2026-01-16 09:55:27] 2026-01-16 09:55:09,949 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 09:55:27] 2026-01-16 09:55:09,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 09:55:27] 2026-01-16 09:55:09,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 09:55:27] 2026-01-16 09:55:19,683 | INFO     | [monitor] cgroup control has ended
[2026-01-16 09:55:27] 2026-01-16 09:55:21,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697891968832)>', '<ExcThread(monitor, started 140697206249216)>']
[2026-01-16 09:55:27] 2026-01-16 09:55:22,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 09:55:27] 2026-01-16 09:55:22,011 | INFO     | [monitor] control thread has ended
[2026-01-16 09:55:27] 2026-01-16 09:55:26,235 | INFO     | all workflow threads have been joined
[2026-01-16 09:55:27] 2026-01-16 09:55:26,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 09:55:27] 2026-01-16 09:55:26,239 | INFO     | traces error code: 0
[2026-01-16 09:55:27] 2026-01-16 09:55:26,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 09:55:27] 2026-01-16 09:55:26,610 [wrapper] ==== pilot stdout END ====
[2026-01-16 09:55:27] 2026-01-16 09:55:26,618 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 09:55:27] 2026-01-16 09:55:26,626 [wrapper] pilotpid: 3248100
[2026-01-16 09:55:27] 2026-01-16 09:55:26,633 [wrapper] Pilot exit status: 0
[2026-01-16 09:55:27] 2026-01-16 09:55:26,666 [wrapper] pandaids: 6969843959
[2026-01-16 09:55:27] 2026-01-16 09:55:26,868 [wrapper] cleanup supervisor_pilot 3705753 3248101
[2026-01-16 09:55:27] 2026-01-16 09:55:26,876 [wrapper] Test setup, not cleaning
[2026-01-16 09:55:27] 2026-01-16 09:55:26,884 [wrapper] apfmon messages muted
[2026-01-16 09:55:27] 2026-01-16 09:55:26,893 [wrapper] ==== wrapper stdout END ====
[2026-01-16 09:55:27] 2026-01-16 09:55:26,901 [wrapper] ==== wrapper stderr END ====
[2026-01-16 09:55:27]  *** Error codes and diagnostics ***
[2026-01-16 09:55:27]     "exeErrorCode": 0,
[2026-01-16 09:55:27]     "exeErrorDiag": "",
[2026-01-16 09:55:27]     "pilotErrorCode": 0,
[2026-01-16 09:55:27]     "pilotErrorDiag": "",
[2026-01-16 09:55:27]  *** Listing of results directory ***
[2026-01-16 09:55:27] total 742372
[2026-01-16 09:55:27] -rw-r--r-- 1 boinc boinc      5112 Jan 14 23:30 queuedata.json
[2026-01-16 09:55:27] -rw-r--r-- 1 boinc boinc    579449 Jan 14 23:30 pilot3.tar.gz
[2026-01-16 09:55:27] -rwx------ 1 boinc boinc     36322 Jan 14 23:31 runpilot2-wrapper.sh
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc       100 Jan 16 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 09:55:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 08:18 run_atlas
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc       105 Jan 16 08:18 job.xml
[2026-01-16 09:55:27] -rw-r--r-- 2 boinc boinc 597572434 Jan 16 08:18 EVNT.32794306._001514.pool.root.1
[2026-01-16 09:55:27] -rw-r--r-- 2 boinc boinc     15847 Jan 16 08:18 start_atlas.sh
[2026-01-16 09:55:27] drwxrwx--x 2 boinc boinc      4096 Jan 16 08:18 shared
[2026-01-16 09:55:27] -rw-r--r-- 2 boinc boinc    592401 Jan 16 08:18 input.tar.gz
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 08:18 init_data.xml
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc         0 Jan 16 08:18 boinc_setup_complete
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc         0 Jan 16 08:18 boinc_lockfile
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc      2509 Jan 16 08:18 pandaJob.out
[2026-01-16 09:55:27] -rw------- 1 boinc boinc   1004075 Jan 16 08:19 agis_schedconf.cvmfs.json
[2026-01-16 09:55:27] -rw------- 1 boinc boinc   1516246 Jan 16 08:19 agis_ddmendpoints.agis.ALL.json
[2026-01-16 09:55:27] drwx------ 5 boinc boinc      4096 Jan 16 08:19 pilot3
[2026-01-16 09:55:27] -rw------- 1 boinc boinc 156288631 Jan 16 09:53 HITS.48215263._037933.pool.root.1
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc       531 Jan 16 09:53 boinc_task_state.xml
[2026-01-16 09:55:27] -rw------- 1 boinc boinc        95 Jan 16 09:54 pilot_heartbeat.json
[2026-01-16 09:55:27] -rw------- 1 boinc boinc      1021 Jan 16 09:54 memory_monitor_summary.json
[2026-01-16 09:55:27] -rw------- 1 boinc boinc    395331 Jan 16 09:54 log.48215263._037933.job.log.tgz.1
[2026-01-16 09:55:27] -rw------- 1 boinc boinc      7729 Jan 16 09:54 heartbeat.json
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 09:55 boinc_mmap_file
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc        27 Jan 16 09:55 wrapper_checkpoint.txt
[2026-01-16 09:55:27] -rw------- 1 boinc boinc      4848 Jan 16 09:55 pilotlog.txt
[2026-01-16 09:55:27] -rw------- 1 boinc boinc    799336 Jan 16 09:55 log.48215263._037933.job.log.1
[2026-01-16 09:55:27] -rw------- 1 boinc boinc       357 Jan 16 09:55 output.list
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc       620 Jan 16 09:55 runtime_log
[2026-01-16 09:55:27] -rw------- 1 boinc boinc   1218560 Jan 16 09:55 result.tar.gz
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 09:55 runtime_log.err
[2026-01-16 09:55:27] -rw------- 1 boinc boinc       651 Jan 16 09:55 jZyNDmWVP08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmd7sKDmRpzDCo.diag
[2026-01-16 09:55:27] -rw-rw-r-- 1 boinc boinc     22430 Jan 16 09:55 stderr.txt
[2026-01-16 09:55:27] HITS file was successfully produced:
[2026-01-16 09:55:27] -rw------- 1 boinc boinc 156288631 Jan 16 09:53 shared/HITS.pool.root.1
[2026-01-16 09:55:27]  *** Contents of shared directory: ***
[2026-01-16 09:55:27] total 737992
[2026-01-16 09:55:27] -rw-r--r-- 2 boinc boinc 597572434 Jan 16 08:18 ATLAS.root_0
[2026-01-16 09:55:27] -rw-r--r-- 2 boinc boinc     15847 Jan 16 08:18 start_atlas.sh
[2026-01-16 09:55:27] -rw-r--r-- 2 boinc boinc    592401 Jan 16 08:18 input.tar.gz
[2026-01-16 09:55:27] -rw------- 1 boinc boinc 156288631 Jan 16 09:53 HITS.pool.root.1
[2026-01-16 09:55:27] -rw------- 1 boinc boinc   1218560 Jan 16 09:55 result.tar.gz
09:55:28 (3243526): run_atlas exited; CPU time 31361.905929
09:55:28 (3243526): called boinc_finish(0)

</stderr_txt>
]]>

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