Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:21:00 (3267530): wrapper (7.7.26015): starting
08:21:00 (3267530): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 08:21:00] Arguments: --nthreads 12
[2026-01-16 08:21:00] Threads: 12
[2026-01-16 08:21:00] Checking for CVMFS
[2026-01-16 08:21:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 08:21:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 08:21:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 08:21:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 08:21:01] 2.13.3.0 40677 10229 68200 155201 1 236 3989272 4096000 18510 130560 0 81190835 99.981 1145034 231 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 08:21:01] CVMFS is ok
[2026-01-16 08:21:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 08:21:01] Checking for apptainer binary...
[2026-01-16 08:21:01] apptainer is not installed, using version from CVMFS
[2026-01-16 08:21:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 08:21:03] epyc7v12
[2026-01-16 08:21:03] apptainer works
[2026-01-16 08:21:03] Set ATHENA_PROC_NUMBER=12
[2026-01-16 08:21:03] Set ATHENA_CORE_NUMBER=12
[2026-01-16 08:21:03] Starting ATLAS job with PandaID=6969844583
[2026-01-16 08:21:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 09:56:50]  *** The last 200 lines of the pilot log: ***
[2026-01-16 09:56:50] 2026-01-16 09:55:43,719 | INFO     | summary of transferred files:
[2026-01-16 09:56:50] 2026-01-16 09:55:43,719 | INFO     |  -- lfn=log.48215263._038325.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 09:56:50] 2026-01-16 09:55:43,720 | INFO     | stage-out finished correctly
[2026-01-16 09:56:50] 2026-01-16 09:55:44,016 | INFO     | time since job start (5650s) is within the limit (349056.0s)
[2026-01-16 09:56:50] 2026-01-16 09:55:44,762 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 09:56:50] 2026-01-16 09:55:45,012 | WARNING  | process 3291486 can no longer be monitored (due to stat problems) - aborting
[2026-01-16 09:56:50] 2026-01-16 09:55:45,012 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/1/PanDA_Pilot-6969844583/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 09:56:50] 2026-01-16 09:55:46,034 | INFO     | time since job start (5652s) is within the limit (349056.0s)
[2026-01-16 09:56:50] 2026-01-16 09:55:46,082 | INFO     | number of running child processes to parent process 3291486: 1
[2026-01-16 09:56:50] 2026-01-16 09:55:46,082 | INFO     | maximum number of monitored processes: 6
[2026-01-16 09:56:50] 2026-01-16 09:55:46,579 | INFO     | job 6969844583 has state=finished
[2026-01-16 09:56:50] 2026-01-16 09:55:46,580 | INFO     | preparing for final server update for job 6969844583 in state='finished'
[2026-01-16 09:56:50] 2026-01-16 09:55:46,580 | INFO     | this job has now completed (state=finished)
[2026-01-16 09:56:50] 2026-01-16 09:55:46,580 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 09:56:50] 2026-01-16 09:55:46,580 | INFO     | log transfer has been attempted: DONE
[2026-01-16 09:56:50] 2026-01-16 09:55:46,580 | INFO     | job 6969844583 has finished - writing final server update
[2026-01-16 09:56:50] 2026-01-16 09:55:46,581 | INFO     | total number of processed events: 400 (read)
[2026-01-16 09:56:50] 2026-01-16 09:55:46,584 | INFO     | executing command: lscpu
[2026-01-16 09:56:50] 2026-01-16 09:55:46,721 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 09:56:50] 2026-01-16 09:55:48,520 | INFO     | PID=3276208 has CPU usage=20.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 09:56:50] 2026-01-16 09:55:48,520 | INFO     | .. there are 21 such processes running
[2026-01-16 09:56:50] 2026-01-16 09:55:48,590 | INFO     | monitor loop #370: job 0:6969844583 is in state 'finished'
[2026-01-16 09:56:50] 2026-01-16 09:55:48,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:56:50] 2026-01-16 09:55:49,521 | INFO     | time since job start (5655s) is within the limit (349056.0s)
[2026-01-16 09:56:50] 2026-01-16 09:55:51,096 | INFO     | monitor loop #371: job 0:6969844583 is in state 'finished'
[2026-01-16 09:56:50] 2026-01-16 09:55:51,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:56:50] 2026-01-16 09:55:51,527 | INFO     | time since job start (5657s) is within the limit (349056.0s)
[2026-01-16 09:56:50] 2026-01-16 09:55:53,538 | INFO     | time since job start (5659s) is within the limit (349056.0s)
[2026-01-16 09:56:50] 2026-01-16 09:55:53,599 | INFO     | monitor loop #372: job 0:6969844583 is in state 'finished'
[2026-01-16 09:56:50] 2026-01-16 09:55:53,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:56:50] 2026-01-16 09:55:55,544 | INFO     | time since job start (5661s) is within the limit (349056.0s)
[2026-01-16 09:56:50] 2026-01-16 09:55:56,102 | INFO     | monitor loop #373: job 0:6969844583 is in state 'finished'
[2026-01-16 09:56:50] 2026-01-16 09:55:56,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:56:50] 2026-01-16 09:55:57,549 | INFO     | time since job start (5663s) is within the limit (349056.0s)
[2026-01-16 09:56:50] 2026-01-16 09:55:58,607 | INFO     | monitor loop #374: job 0:6969844583 is in state 'finished'
[2026-01-16 09:56:50] 2026-01-16 09:55:58,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 09:56:50] 2026-01-16 09:55:59,554 | INFO     | time since job start (5665s) is within the limit (349056.0s)
[2026-01-16 09:56:50] 2026-01-16 09:56:00,101 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 09:56:50] 2026-01-16 09:56:00,148 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2398.2605468750016
[2026-01-16 09:56:50] 2026-01-16 09:56:00,209 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/1/PanDA_Pilot-6969844583/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 09:56:50] 2026-01-16 09:56:00,210 | INFO     | extracted standard info from prmon json
[2026-01-16 09:56:50] 2026-01-16 09:56:00,210 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 09:56:50] 2026-01-16 09:56:00,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 09:56:50] 2026-01-16 09:56:00,215 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 09:56:50] 2026-01-16 09:56:00,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 09:56:50] 2026-01-16 09:56:00,221 | INFO     | fitting pss+swap vs Time
[2026-01-16 09:56:50] 2026-01-16 09:56:00,221 | INFO     | sum of square deviations: 190403570.0
[2026-01-16 09:56:50] 2026-01-16 09:56:00,221 | INFO     | sum of deviations: 3480180295.999999
[2026-01-16 09:56:50] 2026-01-16 09:56:00,221 | INFO     | mean x: 1768554630.0
[2026-01-16 09:56:50] 2026-01-16 09:56:00,222 | INFO     | mean y: 2710996.2470588237
[2026-01-16 09:56:50] 2026-01-16 09:56:00,222 | INFO     | intersect: -32322780462.37196
[2026-01-16 09:56:50] 2026-01-16 09:56:00,226 | INFO     | chi2: 0.14842357696890354
[2026-01-16 09:56:50] 2026-01-16 09:56:00,226 | INFO     | current memory leak: 18.28 B/s (using 85 data points, chi2=0.15)
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | could have reported an average CPU frequency of 2402 MHz (7 samples)
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | ..............................
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | . Timing measurements:
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | . get job = 0 s
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | . initial setup = 2 s
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | . payload setup = 17 s
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | . stage-in = 0 s
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | . payload execution = 5589 s
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | . stage-out = 1 s
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | . log creation = 0 s
[2026-01-16 09:56:50] 2026-01-16 09:56:00,227 | INFO     | ..............................
[2026-01-16 09:56:50] 2026-01-16 09:56:00,487 | INFO     | 
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | job summary report
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | --------------------------------------------------
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | PanDA job id: 6969844583
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | task id: 48215263
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | errors: (none)
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | pilot state: finished 
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | transexitcode: 0
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | exeerrorcode: 0
[2026-01-16 09:56:50] 2026-01-16 09:56:00,488 | INFO     | exeerrordiag: 
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | exitcode: 0
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | exitmsg: OK
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | cpuconsumptiontime: 30567 s
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | nevents: 400
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | neventsw: 0
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | pid: 3291486
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | pgrp: 3291486
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | corecount: 12
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | event service: False
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | sizes: {0: 2283798, 1: 2283826, 2: 2283997, 12: 2284025, 15: 2284315, 23: 2284343, 5611: 2311167, 5612: 2320211, 5613: 2320267, 5629: 2320461}
[2026-01-16 09:56:50] 2026-01-16 09:56:00,489 | INFO     | --------------------------------------------------
[2026-01-16 09:56:50] 2026-01-16 09:56:00,490 | INFO     | 
[2026-01-16 09:56:50] 2026-01-16 09:56:00,490 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/1
[2026-01-16 09:56:50] 2026-01-16 09:56:00,554 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,555 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,555 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,555 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,559 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 09:56:50] 2026-01-16 09:56:00,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,560 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 09:56:50] 2026-01-16 09:56:00,560 | INFO     | job 6969844583 has completed (purged errors)
[2026-01-16 09:56:50] 2026-01-16 09:56:00,560 | INFO     | overall cleanup function is called
[2026-01-16 09:56:50] 2026-01-16 09:56:01,575 | INFO     | --- collectZombieJob: --- 10, [3291486]
[2026-01-16 09:56:50] 2026-01-16 09:56:01,575 | INFO     | zombie collector waiting for pid 3291486
[2026-01-16 09:56:50] 2026-01-16 09:56:01,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 09:56:50] 2026-01-16 09:56:01,576 | INFO     | collected zombie processes
[2026-01-16 09:56:50] 2026-01-16 09:56:01,576 | INFO     | will attempt to kill all subprocesses of pid=3291486
[2026-01-16 09:56:50] 2026-01-16 09:56:02,823 | INFO     | process IDs to be killed: [3291486] (in reverse order)
[2026-01-16 09:56:50] 2026-01-16 09:56:03,385 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 09:56:50] 2026-01-16 09:56:03,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 09:56:50] 2026-01-16 09:56:03,424 | INFO     | did not find any defunct processes belonging to 3291486
[2026-01-16 09:56:50] 2026-01-16 09:56:03,458 | INFO     | did not find any defunct processes belonging to 3291486
[2026-01-16 09:56:50] 2026-01-16 09:56:03,458 | INFO     | ready for new job
[2026-01-16 09:56:50] 2026-01-16 09:56:03,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 09:56:50] 2026-01-16 09:56:03,460 | INFO     | ***************************************
[2026-01-16 09:56:50] 2026-01-16 09:56:03,461 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 09:56:50] 2026-01-16 09:56:03,461 | INFO     | ***************************************
[2026-01-16 09:56:50] 2026-01-16 09:56:03,461 | INFO     | 
[2026-01-16 09:56:50] 2026-01-16 09:56:03,472 | INFO     | architecture information:
[2026-01-16 09:56:50] 2026-01-16 09:56:03,473 | INFO     | executing command: cat /etc/os-release
[2026-01-16 09:56:50] 2026-01-16 09:56:03,516 | INFO     | cat /etc/os-release:
[2026-01-16 09:56:50] NAME="CentOS Linux"
[2026-01-16 09:56:50] VERSION="7 (Core)"
[2026-01-16 09:56:50] ID="centos"
[2026-01-16 09:56:50] ID_LIKE="rhel fedora"
[2026-01-16 09:56:50] VERSION_ID="7"
[2026-01-16 09:56:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 09:56:50] ANSI_COLOR="0;31"
[2026-01-16 09:56:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 09:56:50] HOME_URL="https://www.centos.org/"
[2026-01-16 09:56:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 09:56:50] 
[2026-01-16 09:56:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 09:56:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 09:56:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 09:56:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 09:56:50] 
[2026-01-16 09:56:50] 2026-01-16 09:56:03,517 | INFO     | ***************************************
[2026-01-16 09:56:50] 2026-01-16 09:56:04,020 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/1
[2026-01-16 09:56:50] 2026-01-16 09:56:04,071 | INFO     | sufficient remaining disk space (267134173184 B)
[2026-01-16 09:56:50] 2026-01-16 09:56:04,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 09:56:50] 2026-01-16 09:56:04,071 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 09:56:50] 2026-01-16 09:56:04,072 | INFO     | update_server=False
[2026-01-16 09:56:50] 2026-01-16 09:56:04,072 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 09:56:50] 2026-01-16 09:56:04,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 09:56:50] 2026-01-16 09:56:04,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 09:56:50] 2026-01-16 09:56:04,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 09:56:50] 2026-01-16 09:56:04,625 | INFO     | aborting loop
[2026-01-16 09:56:50] 2026-01-16 09:56:04,940 | INFO     | all job control threads have been joined
[2026-01-16 09:56:50] 2026-01-16 09:56:05,076 | INFO     | [job] retrieve thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:05,122 | INFO     | all data control threads have been joined
[2026-01-16 09:56:50] 2026-01-16 09:56:05,445 | INFO     | [job] validate thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:05,457 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:05,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 09:56:50] 2026-01-16 09:56:05,550 | INFO     | all payload control threads have been joined
[2026-01-16 09:56:50] 2026-01-16 09:56:05,623 | INFO     | [data] copytool_in thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:05,630 | INFO     | [job] job monitor thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:05,718 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:05,738 | INFO     | [payload] validate_post thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:05,904 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:05,945 | INFO     | [job] control thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:05,994 | INFO     | [payload] failed_post thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:06,127 | INFO     | [data] control thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:06,445 | INFO     | [data] copytool_out thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:06,512 | INFO     | [job] queue monitor thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:06,555 | INFO     | [payload] control thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:08,509 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:14,207 | INFO     | job.realtimelogging is not enabled
[2026-01-16 09:56:50] 2026-01-16 09:56:15,212 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 09:56:50] 2026-01-16 09:56:33,922 | INFO     | PID=3276208 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 09:56:50] 2026-01-16 09:56:33,923 | INFO     | .. there are 22 such processes running
[2026-01-16 09:56:50] 2026-01-16 09:56:33,923 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 09:56:50] 2026-01-16 09:56:33,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 09:56:50] 2026-01-16 09:56:33,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 09:56:50] 2026-01-16 09:56:42,822 | INFO     | [monitor] cgroup control has ended
[2026-01-16 09:56:50] 2026-01-16 09:56:44,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134655557642048)>', '<ExcThread(monitor, started 134654808028928)>']
[2026-01-16 09:56:50] 2026-01-16 09:56:44,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 09:56:50] 2026-01-16 09:56:44,983 | INFO     | [monitor] control thread has ended
[2026-01-16 09:56:50] 2026-01-16 09:56:49,800 | INFO     | all workflow threads have been joined
[2026-01-16 09:56:50] 2026-01-16 09:56:49,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 09:56:50] 2026-01-16 09:56:49,801 | INFO     | traces error code: 0
[2026-01-16 09:56:50] 2026-01-16 09:56:49,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 09:56:50] 2026-01-16 09:56:50,063 [wrapper] ==== pilot stdout END ====
[2026-01-16 09:56:50] 2026-01-16 09:56:50,074 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 09:56:50] 2026-01-16 09:56:50,086 [wrapper] pilotpid: 3276208
[2026-01-16 09:56:50] 2026-01-16 09:56:50,092 [wrapper] Pilot exit status: 0
[2026-01-16 09:56:50] 2026-01-16 09:56:50,131 [wrapper] pandaids: 6969844583
[2026-01-16 09:56:50] 2026-01-16 09:56:50,301 [wrapper] cleanup supervisor_pilot 3723600 3276209
[2026-01-16 09:56:50] 2026-01-16 09:56:50,313 [wrapper] Test setup, not cleaning
[2026-01-16 09:56:50] 2026-01-16 09:56:50,322 [wrapper] apfmon messages muted
[2026-01-16 09:56:50] 2026-01-16 09:56:50,331 [wrapper] ==== wrapper stdout END ====
[2026-01-16 09:56:50] 2026-01-16 09:56:50,343 [wrapper] ==== wrapper stderr END ====
[2026-01-16 09:56:50]  *** Error codes and diagnostics ***
[2026-01-16 09:56:50]     "exeErrorCode": 0,
[2026-01-16 09:56:50]     "exeErrorDiag": "",
[2026-01-16 09:56:50]     "pilotErrorCode": 0,
[2026-01-16 09:56:50]     "pilotErrorDiag": "",
[2026-01-16 09:56:50]  *** Listing of results directory ***
[2026-01-16 09:56:50] total 745352
[2026-01-16 09:56:50] -rw-r--r-- 1 boinc boinc      5112 Jan 14 23:30 queuedata.json
[2026-01-16 09:56:50] -rw-r--r-- 1 boinc boinc    579449 Jan 14 23:30 pilot3.tar.gz
[2026-01-16 09:56:50] -rwx------ 1 boinc boinc     36322 Jan 14 23:31 runpilot2-wrapper.sh
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc       100 Jan 16 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 09:56:50] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 08:20 run_atlas
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc       105 Jan 16 08:20 job.xml
[2026-01-16 09:56:50] -rw-r--r-- 2 boinc boinc 602537632 Jan 16 08:21 EVNT.32794306._001530.pool.root.1
[2026-01-16 09:56:50] -rw-r--r-- 2 boinc boinc     15847 Jan 16 08:21 start_atlas.sh
[2026-01-16 09:56:50] drwxrwx--x 2 boinc boinc      4096 Jan 16 08:21 shared
[2026-01-16 09:56:50] -rw-r--r-- 2 boinc boinc    592405 Jan 16 08:21 input.tar.gz
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 08:21 init_data.xml
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc         0 Jan 16 08:21 boinc_setup_complete
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc         0 Jan 16 08:21 boinc_lockfile
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc      2506 Jan 16 08:21 pandaJob.out
[2026-01-16 09:56:50] -rw------- 1 boinc boinc   1004075 Jan 16 08:21 agis_schedconf.cvmfs.json
[2026-01-16 09:56:50] -rw------- 1 boinc boinc   1516246 Jan 16 08:21 agis_ddmendpoints.agis.ALL.json
[2026-01-16 09:56:50] drwx------ 5 boinc boinc      4096 Jan 16 08:21 pilot3
[2026-01-16 09:56:50] -rw------- 1 boinc boinc 154433959 Jan 16 09:54 HITS.48215263._038325.pool.root.1
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc       530 Jan 16 09:54 boinc_task_state.xml
[2026-01-16 09:56:50] -rw------- 1 boinc boinc      1020 Jan 16 09:55 memory_monitor_summary.json
[2026-01-16 09:56:50] -rw------- 1 boinc boinc        95 Jan 16 09:55 pilot_heartbeat.json
[2026-01-16 09:56:50] -rw------- 1 boinc boinc    383786 Jan 16 09:55 log.48215263._038325.job.log.tgz.1
[2026-01-16 09:56:50] -rw------- 1 boinc boinc      7726 Jan 16 09:56 heartbeat.json
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc        27 Jan 16 09:56 wrapper_checkpoint.txt
[2026-01-16 09:56:50] -rw------- 1 boinc boinc      4920 Jan 16 09:56 pilotlog.txt
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 09:56 boinc_mmap_file
[2026-01-16 09:56:50] -rw------- 1 boinc boinc    789767 Jan 16 09:56 log.48215263._038325.job.log.1
[2026-01-16 09:56:50] -rw------- 1 boinc boinc       357 Jan 16 09:56 output.list
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc       620 Jan 16 09:56 runtime_log
[2026-01-16 09:56:50] -rw------- 1 boinc boinc   1187840 Jan 16 09:56 result.tar.gz
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 09:56 runtime_log.err
[2026-01-16 09:56:50] -rw------- 1 boinc boinc       651 Jan 16 09:56 VyMNDmtVP08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYzmKDmJgs9mm.diag
[2026-01-16 09:56:50] -rw-rw-r-- 1 boinc boinc     22112 Jan 16 09:56 stderr.txt
[2026-01-16 09:56:50] HITS file was successfully produced:
[2026-01-16 09:56:50] -rw------- 1 boinc boinc 154433959 Jan 16 09:54 shared/HITS.pool.root.1
[2026-01-16 09:56:50]  *** Contents of shared directory: ***
[2026-01-16 09:56:50] total 740996
[2026-01-16 09:56:50] -rw-r--r-- 2 boinc boinc 602537632 Jan 16 08:21 ATLAS.root_0
[2026-01-16 09:56:50] -rw-r--r-- 2 boinc boinc     15847 Jan 16 08:21 start_atlas.sh
[2026-01-16 09:56:50] -rw-r--r-- 2 boinc boinc    592405 Jan 16 08:21 input.tar.gz
[2026-01-16 09:56:50] -rw------- 1 boinc boinc 154433959 Jan 16 09:54 HITS.pool.root.1
[2026-01-16 09:56:50] -rw------- 1 boinc boinc   1187840 Jan 16 09:56 result.tar.gz
09:56:51 (3267530): run_atlas exited; CPU time 30887.948669
09:56:51 (3267530): called boinc_finish(0)

</stderr_txt>
]]>

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