Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:45:10 (381767): wrapper (7.7.26015): starting
04:45:10 (381767): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 04:45:10] Arguments: --nthreads 3
[2026-01-15 04:45:10] Threads: 3
[2026-01-15 04:45:10] Checking for CVMFS
[2026-01-15 04:45:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 04:45:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 04:45:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 04:45:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 04:45:10] 2.9.2.0 3881248 1852 80256 155154 0 57 26613394 36864001 0 130560 0 1890383 99.991 78518 3478 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 04:45:10] CVMFS is ok
[2026-01-15 04:45:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 04:45:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 04:45:10] Further information can be found at the LHC@home message board.
[2026-01-15 04:45:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 04:45:10] Checking for apptainer binary...
[2026-01-15 04:45:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 04:45:10] Running /usr/bin/apptainer --version
[2026-01-15 04:45:10] apptainer version 1.4.1-1.1
[2026-01-15 04:45:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 04:45:10] cosA127b
[2026-01-15 04:45:10] apptainer works
[2026-01-15 04:45:10] Set ATHENA_PROC_NUMBER=3
[2026-01-15 04:45:10] Set ATHENA_CORE_NUMBER=3
[2026-01-15 04:45:10] Starting ATLAS job with PandaID=6969632651
[2026-01-15 04:45:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 05:41:36]  *** The last 200 lines of the pilot log: ***
[2026-01-15 05:41:36]  is_tar=False
[2026-01-15 05:41:36]  lfn=log.48215263._034206.job.log.tgz.1
[2026-01-15 05:41:36]  mtime=0
[2026-01-15 05:41:36]  protocol_id=None
[2026-01-15 05:41:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 05:41:36]  replicas=None
[2026-01-15 05:41:36]  scope=mc23_13p6TeV
[2026-01-15 05:41:36]  status=None
[2026-01-15 05:41:36]  status_code=0
[2026-01-15 05:41:36]  storage_token=
[2026-01-15 05:41:36]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6969632651/log.48215263._034206.job.log.tgz.1
[2026-01-15 05:41:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/b4/log.48215263._034206.job.log.tgz.1
[2026-01-15 05:41:36]  workdir=None
[2026-01-15 05:41:36] ]
[2026-01-15 05:41:36] 2026-01-15 04:40:58,505 | INFO     | transferring file log.48215263._034206.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6969632651/log.48215263._034206.job.log.tgz.1 to /local/data/boinc/
[2026-01-15 05:41:36] 2026-01-15 04:40:58,505 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6969632651/log.48215263._034206.job.log.tgz.1 /local/data/boinc/slots/0/log.48215263._0342
[2026-01-15 05:41:36] 2026-01-15 04:40:58,517 | INFO     | adding to output.list: log.48215263._034206.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/b4/log.48215263._034206.job.log.tg
[2026-01-15 05:41:36] 2026-01-15 04:40:58,517 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 05:41:36] 2026-01-15 04:40:58,517 | INFO     | summary of transferred files:
[2026-01-15 05:41:36] 2026-01-15 04:40:58,517 | INFO     |  -- lfn=log.48215263._034206.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 05:41:36] 2026-01-15 04:40:58,517 | INFO     | stage-out finished correctly
[2026-01-15 05:41:36] 2026-01-15 04:40:58,757 | INFO     | time since job start (3342s) is within the limit (349056.0s)
[2026-01-15 05:41:36] 2026-01-15 04:40:59,311 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 05:41:36] 2026-01-15 04:40:59,340 | INFO     | job 6969632651 has state=finished
[2026-01-15 05:41:36] 2026-01-15 04:40:59,341 | INFO     | preparing for final server update for job 6969632651 in state='finished'
[2026-01-15 05:41:36] 2026-01-15 04:40:59,341 | INFO     | this job has now completed (state=finished)
[2026-01-15 05:41:36] 2026-01-15 04:40:59,341 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 05:41:36] 2026-01-15 04:40:59,341 | INFO     | log transfer has been attempted: DONE
[2026-01-15 05:41:36] 2026-01-15 04:40:59,341 | INFO     | job 6969632651 has finished - writing final server update
[2026-01-15 05:41:36] 2026-01-15 04:40:59,341 | INFO     | total number of processed events: 400 (read)
[2026-01-15 05:41:36] 2026-01-15 04:40:59,342 | INFO     | executing command: lscpu
[2026-01-15 05:41:36] 2026-01-15 04:40:59,354 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 05:41:36] 2026-01-15 04:40:59,531 | INFO     | monitor loop #260: job 0:6969632651 is in state 'finished'
[2026-01-15 05:41:36] 2026-01-15 04:40:59,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 05:41:36] 2026-01-15 04:41:00,762 | INFO     | time since job start (3344s) is within the limit (349056.0s)
[2026-01-15 05:41:36] 2026-01-15 04:41:02,034 | INFO     | monitor loop #261: job 0:6969632651 is in state 'finished'
[2026-01-15 05:41:36] 2026-01-15 04:41:02,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 05:41:36] 2026-01-15 04:41:02,767 | INFO     | time since job start (3346s) is within the limit (349056.0s)
[2026-01-15 05:41:36] 2026-01-15 04:41:03,486 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 05:41:36] 2026-01-15 04:41:03,487 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3505.25775
[2026-01-15 05:41:36] 2026-01-15 04:41:03,488 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6969632651/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 05:41:36] 2026-01-15 04:41:03,488 | INFO     | extracted standard info from prmon json
[2026-01-15 05:41:36] 2026-01-15 04:41:03,488 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 05:41:36] 2026-01-15 04:41:03,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 05:41:36] 2026-01-15 04:41:03,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 05:41:36] 2026-01-15 04:41:03,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 05:41:36] 2026-01-15 04:41:03,489 | INFO     | fitting pss+swap vs Time
[2026-01-15 05:41:36] 2026-01-15 04:41:03,489 | INFO     | sum of square deviations: 34277852.0
[2026-01-15 05:41:36] 2026-01-15 04:41:03,489 | INFO     | sum of deviations: -5981698338.5
[2026-01-15 05:41:36] 2026-01-15 04:41:03,489 | INFO     | mean x: 1768450473.5
[2026-01-15 05:41:36] 2026-01-15 04:41:03,489 | INFO     | mean y: 2520956.6875
[2026-01-15 05:41:36] 2026-01-15 04:41:03,489 | INFO     | intersect: 308608126087.7934
[2026-01-15 05:41:36] 2026-01-15 04:41:03,489 | INFO     | chi2: 0.04040059312789235
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | current memory leak: -174.51 B/s (using 48 data points, chi2=0.04)
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | could have reported an average CPU frequency of 3803 MHz (5 samples)
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | ..............................
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | . Timing measurements:
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | . get job = 0 s
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | . initial setup = 1 s
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | . payload setup = 2 s
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | . stage-in = 0 s
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | . payload execution = 3322 s
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | . stage-out = 0 s
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | . log creation = 0 s
[2026-01-15 05:41:36] 2026-01-15 04:41:03,490 | INFO     | ..............................
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | 
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | job summary report
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | --------------------------------------------------
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | PanDA job id: 6969632651
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | task id: 48215263
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | errors: (none)
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | pilot state: finished 
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | transexitcode: 0
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | exeerrorcode: 0
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | exeerrordiag: 
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | exitcode: 0
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | exitmsg: OK
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | cpuconsumptiontime: 9379 s
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | nevents: 400
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | neventsw: 0
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | pid: 391942
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | pgrp: 391942
[2026-01-15 05:41:36] 2026-01-15 04:41:03,972 | INFO     | corecount: 3
[2026-01-15 05:41:36] 2026-01-15 04:41:03,973 | INFO     | event service: False
[2026-01-15 05:41:36] 2026-01-15 04:41:03,973 | INFO     | sizes: {0: 2283953, 2: 2284215, 10: 2284243, 3329: 2309944, 3330: 2318948, 3331: 2319004, 3335: 2319358}
[2026-01-15 05:41:36] 2026-01-15 04:41:03,973 | INFO     | --------------------------------------------------
[2026-01-15 05:41:36] 2026-01-15 04:41:03,973 | INFO     | 
[2026-01-15 05:41:36] 2026-01-15 04:41:03,973 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-15 05:41:36] 2026-01-15 04:41:03,988 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,988 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,988 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,988 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | job 6969632651 has completed (purged errors)
[2026-01-15 05:41:36] 2026-01-15 04:41:03,989 | INFO     | overall cleanup function is called
[2026-01-15 05:41:36] 2026-01-15 04:41:04,996 | INFO     | --- collectZombieJob: --- 10, [391942]
[2026-01-15 05:41:36] 2026-01-15 04:41:04,996 | INFO     | zombie collector waiting for pid 391942
[2026-01-15 05:41:36] 2026-01-15 04:41:04,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 05:41:36] 2026-01-15 04:41:04,997 | INFO     | collected zombie processes
[2026-01-15 05:41:36] 2026-01-15 04:41:04,997 | INFO     | will attempt to kill all subprocesses of pid=391942
[2026-01-15 05:41:36] 2026-01-15 04:41:05,039 | INFO     | process IDs to be killed: [391942] (in reverse order)
[2026-01-15 05:41:36] 2026-01-15 04:41:05,062 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 05:41:36] 2026-01-15 04:41:05,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 05:41:36] 2026-01-15 04:41:05,063 | INFO     | did not find any defunct processes belonging to 391942
[2026-01-15 05:41:36] 2026-01-15 04:41:05,064 | INFO     | did not find any defunct processes belonging to 391942
[2026-01-15 05:41:36] 2026-01-15 04:41:05,064 | INFO     | ready for new job
[2026-01-15 05:41:36] 2026-01-15 04:41:05,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 05:41:36] 2026-01-15 04:41:05,065 | INFO     | ***************************************
[2026-01-15 05:41:36] 2026-01-15 04:41:05,065 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 05:41:36] 2026-01-15 04:41:05,065 | INFO     | ***************************************
[2026-01-15 05:41:36] 2026-01-15 04:41:05,065 | INFO     | 
[2026-01-15 05:41:36] 2026-01-15 04:41:05,065 | INFO     | architecture information:
[2026-01-15 05:41:36] 2026-01-15 04:41:05,065 | INFO     | executing command: cat /etc/os-release
[2026-01-15 05:41:36] 2026-01-15 04:41:05,074 | INFO     | cat /etc/os-release:
[2026-01-15 05:41:36] NAME="CentOS Linux"
[2026-01-15 05:41:36] VERSION="7 (Core)"
[2026-01-15 05:41:36] ID="centos"
[2026-01-15 05:41:36] ID_LIKE="rhel fedora"
[2026-01-15 05:41:36] VERSION_ID="7"
[2026-01-15 05:41:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 05:41:36] ANSI_COLOR="0;31"
[2026-01-15 05:41:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 05:41:36] HOME_URL="https://www.centos.org/"
[2026-01-15 05:41:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 05:41:36] 
[2026-01-15 05:41:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 05:41:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 05:41:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 05:41:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 05:41:36] 
[2026-01-15 05:41:36] 2026-01-15 04:41:05,074 | INFO     | ***************************************
[2026-01-15 05:41:36] 2026-01-15 04:41:05,577 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 05:41:36] 2026-01-15 04:41:05,590 | INFO     | sufficient remaining disk space (333108477952 B)
[2026-01-15 05:41:36] 2026-01-15 04:41:05,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 05:41:36] 2026-01-15 04:41:05,590 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 05:41:36] 2026-01-15 04:41:05,590 | INFO     | update_server=False
[2026-01-15 05:41:36] 2026-01-15 04:41:05,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 05:41:36] 2026-01-15 04:41:05,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 05:41:36] 2026-01-15 04:41:05,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:41:36] 2026-01-15 04:41:05,590 | INFO     | aborting loop
[2026-01-15 05:41:36] 2026-01-15 04:41:05,935 | INFO     | all payload control threads have been joined
[2026-01-15 05:41:36] 2026-01-15 04:41:06,139 | INFO     | all job control threads have been joined
[2026-01-15 05:41:36] 2026-01-15 04:41:06,441 | INFO     | all data control threads have been joined
[2026-01-15 05:41:36] 2026-01-15 04:41:06,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 05:41:36] 2026-01-15 04:41:06,596 | INFO     | [job] retrieve thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:06,596 | INFO     | [job] job monitor thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:06,626 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:06,666 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:06,941 | INFO     | [payload] control thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:07,142 | INFO     | [payload] failed_post thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:07,144 | INFO     | [job] control thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:07,441 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:07,442 | INFO     | [data] control thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:07,493 | INFO     | [data] copytool_in thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:07,520 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:08,039 | INFO     | [job] validate thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:08,072 | INFO     | [payload] validate_post thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:08,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 05:41:36] 2026-01-15 04:41:08,565 | INFO     | [data] copytool_out thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:09,538 | INFO     | [job] queue monitor thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:09,597 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 05:41:36] 2026-01-15 04:41:19,716 | INFO     | [monitor] cgroup control has ended
[2026-01-15 05:41:36] 2026-01-15 04:41:21,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173336508224)>', '<ExcThread(monitor, started 140173054543616)>']
[2026-01-15 05:41:36] 2026-01-15 04:41:26,463 | INFO     | all workflow threads have been joined
[2026-01-15 05:41:36] 2026-01-15 04:41:26,464 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 05:41:36] 2026-01-15 04:41:26,464 | INFO     | traces error code: 0
[2026-01-15 05:41:36] 2026-01-15 04:41:26,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 05:41:36] 2026-01-15 04:41:35,883 | INFO     | PID=385494 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 05:41:36] 2026-01-15 04:41:35,883 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 05:41:36] 2026-01-15 04:41:35,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 05:41:36] 2026-01-15 04:41:35,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 05:41:36] 2026-01-15 04:41:35,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 05:41:36] 2026-01-15 04:41:35,883 | CRITICAL | thread 'MainThread' is not alive
[2026-01-15 05:41:36] 2026-01-15 04:41:35,883 | INFO     | [monitor] control thread has ended
[2026-01-15 05:41:36] 2026-01-15 04:41:35,929 [wrapper] ==== pilot stdout END ====
[2026-01-15 05:41:36] 2026-01-15 04:41:35,932 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 05:41:36] 2026-01-15 04:41:35,935 [wrapper] pilotpid: 385494
[2026-01-15 05:41:36] 2026-01-15 04:41:35,937 [wrapper] Pilot exit status: 0
[2026-01-15 05:41:36] 2026-01-15 04:41:35,944 [wrapper] pandaids: 6969632651
[2026-01-15 05:41:36] 2026-01-15 04:41:35,959 [wrapper] cleanup supervisor_pilot  401272 385495
[2026-01-15 05:41:36] 2026-01-15 04:41:35,962 [wrapper] Test setup, not cleaning
[2026-01-15 05:41:36] 2026-01-15 04:41:35,964 [wrapper] apfmon messages muted
[2026-01-15 05:41:36] 2026-01-15 04:41:35,966 [wrapper] ==== wrapper stdout END ====
[2026-01-15 05:41:36] 2026-01-15 04:41:35,969 [wrapper] ==== wrapper stderr END ====
[2026-01-15 05:41:36]  *** Error codes and diagnostics ***
[2026-01-15 05:41:36]     "exeErrorCode": 0,
[2026-01-15 05:41:36]     "exeErrorDiag": "",
[2026-01-15 05:41:36]     "pilotErrorCode": 0,
[2026-01-15 05:41:36]     "pilotErrorDiag": "",
[2026-01-15 05:41:36]  *** Listing of results directory ***
[2026-01-15 05:41:36] total 738420
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc      5112 Jan 14 21:15 queuedata.json
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc    579449 Jan 14 21:15 pilot3.tar.gz
[2026-01-15 05:41:36] -rwx------ 1 boinc boinc     36322 Jan 14 21:16 runpilot2-wrapper.sh
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc       100 Jan 15 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 05:41:36] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 04:45 run_atlas
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc       105 Jan 15 04:45 job.xml
[2026-01-15 05:41:36] -rw-r--r-- 2 boinc boinc 595492230 Jan 15 04:45 EVNT.32794306._001368.pool.root.1
[2026-01-15 05:41:36] drwxrwx--x 2 boinc boinc      4096 Jan 15 04:45 shared
[2026-01-15 05:41:36] -rw-r--r-- 2 boinc boinc    592398 Jan 15 04:45 input.tar.gz
[2026-01-15 05:41:36] -rw-r--r-- 2 boinc boinc     15847 Jan 15 04:45 start_atlas.sh
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc         0 Jan 15 04:45 boinc_setup_complete
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc      6441 Jan 15 04:45 init_data.xml
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc         0 Jan 15 04:45 boinc_lockfile
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc      2508 Jan 15 04:45 pandaJob.out
[2026-01-15 05:41:36] -rw------- 1 boinc boinc    999472 Jan 15 04:45 agis_schedconf.cvmfs.json
[2026-01-15 05:41:36] -rw------- 1 boinc boinc   1516246 Jan 15 04:45 agis_ddmendpoints.agis.ALL.json
[2026-01-15 05:41:36] drwx------ 5 boinc boinc      4096 Jan 15 04:45 pilot3
[2026-01-15 05:41:36] -rw------- 1 boinc boinc 155285214 Jan 15 05:40 HITS.48215263._034206.pool.root.1
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc       529 Jan 15 05:40 boinc_task_state.xml
[2026-01-15 05:41:36] -rw------- 1 boinc boinc      1022 Jan 15 05:40 memory_monitor_summary.json
[2026-01-15 05:41:36] -rw------- 1 boinc boinc    213769 Jan 15 05:40 log.48215263._034206.job.log.tgz.1
[2026-01-15 05:41:36] -rw------- 1 boinc boinc      7762 Jan 15 05:41 heartbeat.json
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc      8192 Jan 15 05:41 boinc_mmap_file
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc        26 Jan 15 05:41 wrapper_checkpoint.txt
[2026-01-15 05:41:36] -rw------- 1 boinc boinc       816 Jan 15 05:41 pilotlog.txt
[2026-01-15 05:41:36] -rw------- 1 boinc boinc        95 Jan 15 05:41 pilot_heartbeat.json
[2026-01-15 05:41:36] -rw------- 1 boinc boinc    508026 Jan 15 05:41 log.48215263._034206.job.log.1
[2026-01-15 05:41:36] -rw------- 1 boinc boinc       357 Jan 15 05:41 output.list
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc       620 Jan 15 05:41 runtime_log
[2026-01-15 05:41:36] -rw------- 1 boinc boinc    737280 Jan 15 05:41 result.tar.gz
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc      8907 Jan 15 05:41 runtime_log.err
[2026-01-15 05:41:36] -rw------- 1 boinc boinc       658 Jan 15 05:41 Q9TMDm7SM08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcYsKDmX2c6on.diag
[2026-01-15 05:41:36] -rw-r--r-- 1 boinc boinc     21557 Jan 15 05:41 stderr.txt
[2026-01-15 05:41:36] HITS file was successfully produced:
[2026-01-15 05:41:36] -rw------- 1 boinc boinc 155285214 Jan 15 05:40 shared/HITS.pool.root.1
[2026-01-15 05:41:36]  *** Contents of shared directory: ***
[2026-01-15 05:41:36] total 734508
[2026-01-15 05:41:36] -rw-r--r-- 2 boinc boinc 595492230 Jan 15 04:45 ATLAS.root_0
[2026-01-15 05:41:36] -rw-r--r-- 2 boinc boinc    592398 Jan 15 04:45 input.tar.gz
[2026-01-15 05:41:36] -rw-r--r-- 2 boinc boinc     15847 Jan 15 04:45 start_atlas.sh
[2026-01-15 05:41:36] -rw------- 1 boinc boinc 155285214 Jan 15 05:40 HITS.pool.root.1
[2026-01-15 05:41:36] -rw------- 1 boinc boinc    737280 Jan 15 05:41 result.tar.gz
05:41:37 (381767): run_atlas exited; CPU time 9390.467075
05:41:37 (381767): called boinc_finish(0)

</stderr_txt>
]]>

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